miRTarBase - #MIRT079462


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pre-miRNA Information
pre-miRNA hsa-mir-4772   
Genomic Coordinates chr2: 102432289 - 102432366
Description Homo sapiens miR-4772 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4772-3p
Sequence 48| CCUGCAACUUUGCCUGAUCAGA |69
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 6 2 + 102432341 29233923 MiREDiBase
A-to-I 7 2 + 102432342 23291724, 27587585, 29233923 MiREDiBase
A-to-I 20 2 + 102432355 29233923 MiREDiBase
A-to-I 22 2 + 102432357 29233923 MiREDiBase
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN28593220 7 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1256302752 1 dbSNP
rs1235136670 6 dbSNP
rs1321744784 8 dbSNP
rs1009816485 11 dbSNP
rs1022342638 21 dbSNP
Putative Targets

Gene Information
Gene Symbol RAB40B   
Synonyms RAR, SEC4L
Description RAB40B, member RAS oncogene family
Transcript NM_006822   
Expression
Putative miRNA Targets on RAB40B
3'UTR of RAB40B
(miRNA target sites are highlighted)		 
>RAB40B|NM_006822|3'UTR
   1 GGAAGGCACTGAAAGAAACACGGCGGAATCTCTCCAGGAGAAGCTCGGCGTTACCCCCGGCAGCTGGTGGATGCATCTCA
  81 GATCCCGGTTCCTCTCGGCGAATGCTGCTTGCGAATGTGTGCGACGCCTTCCGTGTGATGGAAACACACTACCCCGTCGG
 161 ACTTCGAATTTCTACGTGGATGTGCATGAAGCTCTTGTTTTCGATGTGTGTTTGTAAAGGGAAAATTAGTACTCTGCTCG
 241 ACTCTTGGTAACATGAAATTCTGAATGTTACTTTATCATGATTGCACTGCAACTTTTTCCTTAAAATAACTGCTTTTGTA
 321 AGAACGGTGATATTGGAGTGATTAGTATAAATTCAATGGAATTTGAGAAGCAATGGCAGCGGGATAATTTAGAGTCACTG
 401 ATATTACGAGAGGGGTCTTTTTGTAAACCTCCTTTTCAATGTCAAAGCGCCAATTTATAAAACGCTGCAGATGTAGAGGT
 481 TATGTGCAACTGATCTGTCCAGTTTGTGTATGAAATGGATTTGATAAAGTTTTTGCTAGTTATTTACTACATTTTGGGAT
 561 TAATAAGTGATTTATATGCATATTTTTCTGTAAATCTACAGTTTTTTGTACAAGATATTCTACAAGTTATGAAGCTAAGG
 641 GAAGAAAATGCCAAAGATACCTCTAGTTATGTTGAACACAGCCAGCACAGTTTCGACAGGTCAAGGAAGAGCTGTTTCAG
 721 TAAAGAATGAAGTGAAAACACTTATTTAGGAAAATGTTTCTCAACAATAAAATGTATAGTTGTTTCTCTCTTGGTAAAAA
 801 AAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agaCUAG-UCCGUUU---CAACGUCc 5'
             |:|| ||| |:|   ||| ||| 
Target 5' acaGGTCAAGGAAGAGCTGTTTCAGt 3'
 696 - 721 127.00 -11.00
2 
miRNA  3' agacuagUCCGUUUCAACGucc 5'
                 | |:| |||||:   
Target 5' caataaaATGTATAGTTGTttc 3'
 765 - 786 99.00 -5.52
3 
miRNA  3' agACUAGUCCGUUUCAACGUCc 5'
            |||  | ||||  | |||| 
Target 5' ttTGA-GAAGCAA--TGGCAGc 3'
 362 - 380 98.00 -8.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN17077269 22 COSMIC
COSN26991325 25 COSMIC
COSN30188986 32 COSMIC
COSN26991328 46 COSMIC
COSN26991324 47 COSMIC
COSN13756534 49 COSMIC
COSN31509853 56 COSMIC
COSN28644381 96 COSMIC
COSN20063408 100 COSMIC
COSN30496294 119 COSMIC
COSN13756531 122 COSMIC
COSN13756530 126 COSMIC
COSN31524267 127 COSMIC
COSN30449490 128 COSMIC
COSN30538559 203 COSMIC
COSN31544600 463 COSMIC
COSN30529094 505 COSMIC
COSN31517807 606 COSMIC
COSN7457337 644 COSMIC
COSN24611852 694 COSMIC
COSN26482165 697 COSMIC
COSN31570513 709 COSMIC
COSN31561700 795 COSMIC
COSN7457336 1169 COSMIC
COSN7457335 1320 COSMIC
COSN21178345 1470 COSMIC
COSN25620245 1518 COSMIC
COSN23706490 2013 COSMIC
COSN17006188 2151 COSMIC
COSN17007204 2322 COSMIC
COSN21850363 2431 COSMIC
COSN2502342 2597 COSMIC
COSN22256137 2602 COSMIC
COSN5221745 2627 COSMIC
COSN29107507 2778 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs566119292 3 dbSNP
rs1384976473 7 dbSNP
rs770787173 10 dbSNP
rs760451932 11 dbSNP
rs761008455 18 dbSNP
rs776050585 19 dbSNP
rs3751912 21 dbSNP
rs772468950 21 dbSNP
rs201169084 22 dbSNP
rs1174192268 24 dbSNP
rs202229377 25 dbSNP
rs1351802636 26 dbSNP
rs747782623 27 dbSNP
rs1218279261 34 dbSNP
rs774190466 36 dbSNP
rs768245374 37 dbSNP
rs748833734 38 dbSNP
rs748764916 41 dbSNP
rs1485585491 44 dbSNP
rs374869472 46 dbSNP
rs373168157 47 dbSNP
rs565636323 48 dbSNP
rs761021034 49 dbSNP
rs752874827 50 dbSNP
rs1307776711 53 dbSNP
rs765475581 56 dbSNP
rs547100484 57 dbSNP
rs753877226 58 dbSNP
rs1456220492 59 dbSNP
rs766538636 59 dbSNP
rs760524386 63 dbSNP
rs202007349 67 dbSNP
rs767191577 76 dbSNP
rs961774970 84 dbSNP
rs1441656687 85 dbSNP
rs761720148 86 dbSNP
rs774102898 87 dbSNP
rs146244829 91 dbSNP
rs3751911 96 dbSNP
rs1184230466 97 dbSNP
rs1190660712 98 dbSNP
rs531940453 99 dbSNP
rs1257247030 100 dbSNP
rs1196811642 105 dbSNP
rs999995741 106 dbSNP
rs1482057022 111 dbSNP
rs769388917 112 dbSNP
rs188137213 113 dbSNP
rs778367753 118 dbSNP
rs916646186 121 dbSNP
rs3751910 122 dbSNP
rs546242698 123 dbSNP
rs111294198 125 dbSNP
rs755179029 126 dbSNP
rs1421767975 127 dbSNP
rs754155710 128 dbSNP
rs766337439 129 dbSNP
rs1398390658 132 dbSNP
rs756265057 133 dbSNP
rs750275932 135 dbSNP
rs767591042 136 dbSNP
rs1329273063 137 dbSNP
rs1035637407 138 dbSNP
rs1336399114 139 dbSNP
rs761630201 141 dbSNP
rs774297387 146 dbSNP
rs1417695166 147 dbSNP
rs1183184249 148 dbSNP
rs762667850 149 dbSNP
rs554086386 152 dbSNP
rs759119048 155 dbSNP
rs773525501 156 dbSNP
rs772582291 157 dbSNP
rs759500642 158 dbSNP
rs779243980 159 dbSNP
rs967618809 161 dbSNP
rs769047078 165 dbSNP
rs748733077 166 dbSNP
rs756104311 168 dbSNP
rs149376935 171 dbSNP
rs1446309837 174 dbSNP
rs1395580217 175 dbSNP
rs892925561 176 dbSNP
rs1459892006 178 dbSNP
rs781213834 181 dbSNP
rs1039408217 190 dbSNP
rs1236480736 194 dbSNP
rs1189714831 196 dbSNP
rs564658135 197 dbSNP
rs769388257 202 dbSNP
rs757259866 203 dbSNP
rs751591971 205 dbSNP
rs1251008384 206 dbSNP
rs371681301 208 dbSNP
rs1454982600 210 dbSNP
rs1253179159 211 dbSNP
rs1329636468 212 dbSNP
rs1195134461 214 dbSNP
rs373804585 217 dbSNP
rs763962077 218 dbSNP
rs780865135 219 dbSNP
rs890760954 219 dbSNP
rs762831280 220 dbSNP
rs1413133286 225 dbSNP
rs1315070524 236 dbSNP
rs1352824847 237 dbSNP
rs1258735782 238 dbSNP
rs1239077663 239 dbSNP
rs1371482383 240 dbSNP
rs1305845098 249 dbSNP
rs958334107 253 dbSNP
rs1276787598 258 dbSNP
rs1034098334 259 dbSNP
rs376257474 265 dbSNP
rs1338333458 266 dbSNP
rs185384001 267 dbSNP
rs757314831 271 dbSNP
rs1212547155 275 dbSNP
rs553036472 287 dbSNP
rs1257807262 297 dbSNP
rs1051302865 299 dbSNP
rs1191242792 304 dbSNP
rs1399497791 308 dbSNP
rs537341623 319 dbSNP
rs555239163 325 dbSNP
rs930206973 326 dbSNP
rs536976059 328 dbSNP
rs1010042819 338 dbSNP
rs552299972 346 dbSNP
rs117735422 349 dbSNP
rs1376297719 371 dbSNP
rs780993033 373 dbSNP
rs1316669394 375 dbSNP
rs1328633332 378 dbSNP
rs546095122 380 dbSNP
rs918761554 381 dbSNP
rs368284283 391 dbSNP
rs1424977275 392 dbSNP
rs1235888999 394 dbSNP
rs1280513658 395 dbSNP
rs944712625 397 dbSNP
rs1214072521 399 dbSNP
rs532504265 407 dbSNP
rs1447415569 408 dbSNP
rs941524587 431 dbSNP
rs1422126978 439 dbSNP
rs916691245 440 dbSNP
rs1472859077 445 dbSNP
rs1452586326 448 dbSNP
rs11105 449 dbSNP
rs930695043 451 dbSNP
rs1419327142 452 dbSNP
rs752306286 463 dbSNP
rs181184826 464 dbSNP
rs1258549115 466 dbSNP
rs1323425036 470 dbSNP
rs917499835 471 dbSNP
rs542554556 473 dbSNP
rs1303485834 478 dbSNP
rs993089047 479 dbSNP
rs1315777664 482 dbSNP
rs1280953490 490 dbSNP
rs1209027385 492 dbSNP
rs1277520568 508 dbSNP
rs1287574311 515 dbSNP
rs1233787587 528 dbSNP
rs1469758594 534 dbSNP
rs35919262 539 dbSNP
rs1214323701 542 dbSNP
rs76444460 547 dbSNP
rs967354410 548 dbSNP
rs1286015813 550 dbSNP
rs1446175567 551 dbSNP
rs1470676285 554 dbSNP
rs1163053217 561 dbSNP
rs1392812082 567 dbSNP
rs1020617852 568 dbSNP
rs990020712 572 dbSNP
rs978511504 576 dbSNP
rs968453622 579 dbSNP
rs1358804124 588 dbSNP
rs189489649 590 dbSNP
rs550476184 600 dbSNP
rs1467532331 608 dbSNP
rs1336727818 609 dbSNP
rs1006570129 611 dbSNP
rs900969523 614 dbSNP
rs890797376 618 dbSNP
rs1194152504 625 dbSNP
rs1029252709 630 dbSNP
rs868720000 635 dbSNP
rs766206437 653 dbSNP
rs1438595338 659 dbSNP
rs1187187710 666 dbSNP
rs889142918 667 dbSNP
rs1476419209 668 dbSNP
rs994232151 670 dbSNP
rs1459975427 677 dbSNP
rs1299373661 679 dbSNP
rs897447324 694 dbSNP
rs1039009276 695 dbSNP
rs7224226 699 dbSNP
rs1036416697 719 dbSNP
rs1415199466 724 dbSNP
rs1277405977 725 dbSNP
rs940891874 732 dbSNP
rs895287954 734 dbSNP
rs758156664 741 dbSNP
rs762385310 745 dbSNP
rs1180078532 755 dbSNP
rs1340197893 755 dbSNP
rs993511892 780 dbSNP
rs1456304552 781 dbSNP
rs374328212 796 dbSNP
rs937582298 802 dbSNP
rs765650659 804 dbSNP
rs1257163620 805 dbSNP
rs3794725 806 dbSNP
rs1173216434 807 dbSNP
rs913175793 808 dbSNP
rs978416763 809 dbSNP
rs1171314104 817 dbSNP
rs552496882 818 dbSNP
rs1415105562 822 dbSNP
rs1020460718 825 dbSNP
rs1383816952 829 dbSNP
rs1296268185 830 dbSNP
rs1327048329 847 dbSNP
rs965626899 847 dbSNP
rs988569979 847 dbSNP
rs1350310218 849 dbSNP
rs1211949986 855 dbSNP
rs1260475457 855 dbSNP
rs1485126936 856 dbSNP
rs747805895 858 dbSNP
rs568252146 861 dbSNP
rs185025217 862 dbSNP
rs1453195285 866 dbSNP
rs1191216825 868 dbSNP
rs985185473 878 dbSNP
rs760863252 881 dbSNP
rs542355471 885 dbSNP
rs1434940310 887 dbSNP
rs1157718376 888 dbSNP
rs1310307700 894 dbSNP
rs561110325 895 dbSNP
rs1029366613 908 dbSNP
rs1375209385 917 dbSNP
rs993873756 919 dbSNP
rs896802073 924 dbSNP
rs1306593362 925 dbSNP
rs1017201259 927 dbSNP
rs112183912 931 dbSNP
rs767853079 934 dbSNP
rs562576472 935 dbSNP
rs1380341561 936 dbSNP
rs1160132353 941 dbSNP
rs759399008 948 dbSNP
rs1237411012 957 dbSNP
rs1224743211 960 dbSNP
rs543280681 973 dbSNP
rs1489305692 981 dbSNP
rs1244931770 982 dbSNP
rs1036896276 987 dbSNP
rs192886667 988 dbSNP
rs1459782841 989 dbSNP
rs763509370 989 dbSNP
rs866809068 992 dbSNP
rs1042850968 993 dbSNP
rs189121962 997 dbSNP
rs927552664 998 dbSNP
rs1225739950 1004 dbSNP
rs539266009 1006 dbSNP
rs947087555 1009 dbSNP
rs1387728960 1018 dbSNP
rs1468507081 1024 dbSNP
rs1370124790 1029 dbSNP
rs866307972 1030 dbSNP
rs1230735259 1031 dbSNP
rs1481409009 1033 dbSNP
rs565921261 1040 dbSNP
rs935888667 1042 dbSNP
rs1416872536 1043 dbSNP
rs911132530 1048 dbSNP
rs965143729 1049 dbSNP
rs184529176 1055 dbSNP
rs1166963599 1064 dbSNP
rs1418495832 1067 dbSNP
rs1405965472 1070 dbSNP
rs192563357 1072 dbSNP
rs985308333 1080 dbSNP
rs1299490840 1081 dbSNP
rs1417245203 1084 dbSNP
rs955192105 1091 dbSNP
rs1026939035 1092 dbSNP
rs1295579142 1093 dbSNP
rs1336090937 1095 dbSNP
rs1379314829 1098 dbSNP
rs770750585 1099 dbSNP
rs1434719043 1111 dbSNP
rs922406528 1112 dbSNP
rs972867059 1117 dbSNP
rs1422763324 1124 dbSNP
rs963733784 1127 dbSNP
rs1014914813 1128 dbSNP
rs1484531458 1140 dbSNP
rs961090676 1143 dbSNP
rs553585972 1150 dbSNP
rs1016972390 1151 dbSNP
rs1005209984 1152 dbSNP
rs186560534 1158 dbSNP
rs1005264721 1168 dbSNP
rs895920320 1169 dbSNP
rs568048241 1170 dbSNP
rs1169421416 1174 dbSNP
rs532393038 1177 dbSNP
rs749286422 1180 dbSNP
rs1375074014 1183 dbSNP
rs1001667119 1189 dbSNP
rs1315174697 1192 dbSNP
rs549822560 1198 dbSNP
rs1043328415 1199 dbSNP
rs947645329 1211 dbSNP
rs776119225 1212 dbSNP
rs1003741655 1215 dbSNP
rs906668979 1218 dbSNP
rs538491358 1227 dbSNP
rs1280739096 1235 dbSNP
rs1446260038 1241 dbSNP
rs1314355201 1243 dbSNP
rs1299622800 1244 dbSNP
rs943676044 1247 dbSNP
rs796238176 1248 dbSNP
rs1189311200 1254 dbSNP
rs1042493747 1256 dbSNP
rs1394625670 1261 dbSNP
rs985172903 1274 dbSNP
rs1010025078 1275 dbSNP
rs1300522701 1292 dbSNP
rs1400525141 1298 dbSNP
rs893813142 1299 dbSNP
rs1316778116 1300 dbSNP
rs1397615651 1300 dbSNP
rs1347480573 1302 dbSNP
rs1383565771 1303 dbSNP
rs571063939 1309 dbSNP
rs35834449 1315 dbSNP
rs1302052323 1319 dbSNP
rs1054232430 1322 dbSNP
rs1368193489 1328 dbSNP
rs1236008069 1330 dbSNP
rs1303718841 1332 dbSNP
rs943373890 1333 dbSNP
rs1303109145 1335 dbSNP
rs1467241487 1346 dbSNP
rs911163523 1350 dbSNP
rs1049620975 1354 dbSNP
rs772608239 1355 dbSNP
rs974017835 1356 dbSNP
rs922406208 1367 dbSNP
rs561789790 1368 dbSNP
rs552871327 1369 dbSNP
rs961384390 1370 dbSNP
rs1378431760 1378 dbSNP
rs909629689 1379 dbSNP
rs1469898564 1382 dbSNP
rs1410698952 1383 dbSNP
rs1458196925 1385 dbSNP
rs1325879363 1389 dbSNP
rs1391586081 1393 dbSNP
rs527876973 1396 dbSNP
rs983811913 1399 dbSNP
rs959013041 1402 dbSNP
rs117233767 1403 dbSNP
rs906063207 1405 dbSNP
rs1021735236 1410 dbSNP
rs1467143522 1412 dbSNP
rs773054511 1415 dbSNP
rs892063547 1416 dbSNP
rs1003772707 1422 dbSNP
rs1179971091 1426 dbSNP
rs569980610 1427 dbSNP
rs1318973881 1428 dbSNP
rs943724579 1430 dbSNP
rs769298609 1445 dbSNP
rs1217303033 1450 dbSNP
rs369025134 1451 dbSNP
rs541431643 1452 dbSNP
rs562516109 1457 dbSNP
rs893924044 1463 dbSNP
rs1389301138 1468 dbSNP
rs774461941 1469 dbSNP
rs1350841176 1470 dbSNP
rs544204516 1483 dbSNP
rs1376528089 1486 dbSNP
rs1335606853 1488 dbSNP
rs1465969816 1497 dbSNP
rs919649230 1498 dbSNP
rs889088242 1506 dbSNP
rs1266072360 1509 dbSNP
rs575893188 1515 dbSNP
rs150610160 1519 dbSNP
rs780818361 1521 dbSNP
rs1277071492 1527 dbSNP
rs1483549763 1528 dbSNP
rs1187699738 1529 dbSNP
rs908464479 1530 dbSNP
rs992477963 1538 dbSNP
rs754685283 1545 dbSNP
rs1169219219 1546 dbSNP
rs1188336993 1546 dbSNP
rs1365686854 1550 dbSNP
rs746210467 1551 dbSNP
rs980184890 1553 dbSNP
rs970128466 1558 dbSNP
rs1294803804 1561 dbSNP
rs939850882 1563 dbSNP
rs909653119 1577 dbSNP
rs1225343690 1579 dbSNP
rs184223014 1585 dbSNP
rs983842963 1588 dbSNP
rs1343124871 1592 dbSNP
rs1183178921 1595 dbSNP
rs937677364 1596 dbSNP
rs1278593547 1617 dbSNP
rs1484455709 1620 dbSNP
rs926234649 1622 dbSNP
rs1011747295 1626 dbSNP
rs111276855 1628 dbSNP
rs982367349 1630 dbSNP
rs550064013 1637 dbSNP
rs1390319109 1654 dbSNP
rs572545853 1657 dbSNP
rs1171423562 1659 dbSNP
rs1021205656 1660 dbSNP
rs1031956052 1665 dbSNP
rs1466390492 1666 dbSNP
rs1008879217 1674 dbSNP
rs769355408 1675 dbSNP
rs890826040 1687 dbSNP
rs1339301216 1703 dbSNP
rs1366074979 1704 dbSNP
rs559099193 1708 dbSNP
rs757597177 1712 dbSNP
rs1319356082 1713 dbSNP
rs1032404711 1723 dbSNP
rs866329311 1724 dbSNP
rs1447029071 1725 dbSNP
rs1378907356 1726 dbSNP
rs932283781 1729 dbSNP
rs572128008 1732 dbSNP
rs1211164390 1738 dbSNP
rs898251207 1747 dbSNP
rs555997566 1748 dbSNP
rs1467659287 1749 dbSNP
rs1390535547 1750 dbSNP
rs1191321277 1761 dbSNP
rs1007575361 1764 dbSNP
rs939904997 1764 dbSNP
rs1158089415 1765 dbSNP
rs754325657 1766 dbSNP
rs1459537287 1770 dbSNP
rs569988975 1783 dbSNP
rs541915212 1784 dbSNP
rs201302225 1800 dbSNP
rs1163231575 1820 dbSNP
rs1030255693 1821 dbSNP
rs997519297 1832 dbSNP
rs1369983686 1833 dbSNP
rs111946258 1834 dbSNP
rs1177167294 1836 dbSNP
rs1315553762 1841 dbSNP
rs926513016 1845 dbSNP
rs1437554174 1846 dbSNP
rs76891339 1851 dbSNP
rs939862659 1852 dbSNP
rs192781482 1853 dbSNP
rs1488601475 1858 dbSNP
rs1176309700 1874 dbSNP
rs556766541 1875 dbSNP
rs1473468118 1876 dbSNP
rs1159726730 1881 dbSNP
rs769838413 1883 dbSNP
rs1355410014 1890 dbSNP
rs1306554122 1891 dbSNP
rs1459861847 1891 dbSNP
rs1238088244 1892 dbSNP
rs1331431011 1893 dbSNP
rs1437717852 1894 dbSNP
rs1351723770 1895 dbSNP
rs1437424760 1895 dbSNP
rs1384983894 1896 dbSNP
rs1297839184 1899 dbSNP
rs956270535 1907 dbSNP
rs1412074658 1908 dbSNP
rs866268362 1909 dbSNP
rs1032245971 1910 dbSNP
rs1491332013 1910 dbSNP
rs1420315356 1911 dbSNP
rs796882052 1911 dbSNP
rs1491428412 1912 dbSNP
rs1182613914 1913 dbSNP
rs1203320311 1913 dbSNP
rs1249266523 1913 dbSNP
rs1321849646 1913 dbSNP
rs1368965621 1913 dbSNP
rs1483880443 1913 dbSNP
rs200946319 1913 dbSNP
rs576562825 1913 dbSNP
rs66478872 1913 dbSNP
rs749212873 1913 dbSNP
rs767901689 1913 dbSNP
rs774938185 1913 dbSNP
rs369008504 1914 dbSNP
rs1309015507 1915 dbSNP
rs1156999489 1917 dbSNP
rs1286491058 1917 dbSNP
rs1375266040 1917 dbSNP
rs1379176792 1926 dbSNP
rs1048173631 1931 dbSNP
rs1378546455 1935 dbSNP
rs1201713602 1936 dbSNP
rs1450386528 1937 dbSNP
rs1189725928 1939 dbSNP
rs187936822 1941 dbSNP
rs955628933 1945 dbSNP
rs926351113 1950 dbSNP
rs1283476217 1959 dbSNP
rs981814842 1969 dbSNP
rs534542607 1970 dbSNP
rs996522413 1975 dbSNP
rs1345510923 1980 dbSNP
rs1388474746 1984 dbSNP
rs150184240 1990 dbSNP
rs914171287 1994 dbSNP
rs1169519214 1995 dbSNP
rs1375169481 2004 dbSNP
rs988384391 2005 dbSNP
rs1004351008 2006 dbSNP
rs1317917055 2008 dbSNP
rs566915631 2010 dbSNP
rs1056714111 2017 dbSNP
rs939163448 2025 dbSNP
rs926542478 2026 dbSNP
rs1316556168 2027 dbSNP
rs1220756096 2038 dbSNP
rs1279140363 2042 dbSNP
rs1446355963 2043 dbSNP
rs867733158 2045 dbSNP
rs548397089 2046 dbSNP
rs530089464 2053 dbSNP
rs953498467 2054 dbSNP
rs914553713 2055 dbSNP
rs1479626337 2061 dbSNP
rs990280804 2069 dbSNP
rs569019121 2070 dbSNP
rs1390147329 2074 dbSNP
rs1435187614 2077 dbSNP
rs997953122 2088 dbSNP
rs2306912 2095 dbSNP
rs1015944948 2101 dbSNP
rs1438257624 2102 dbSNP
rs1004092130 2108 dbSNP
rs1349751512 2109 dbSNP
rs532402471 2114 dbSNP
rs1269975797 2129 dbSNP
rs868304868 2132 dbSNP
rs767836607 2133 dbSNP
rs183442142 2136 dbSNP
rs1442638589 2144 dbSNP
rs545765797 2145 dbSNP
rs2306911 2151 dbSNP
rs766157988 2154 dbSNP
rs913547205 2155 dbSNP
rs1016998392 2167 dbSNP
rs1163582450 2174 dbSNP
rs1057423 2188 dbSNP
rs1053119564 2189 dbSNP
rs1057424 2192 dbSNP
rs762677767 2193 dbSNP
rs1406720125 2194 dbSNP
rs1220361316 2196 dbSNP
rs773136679 2198 dbSNP
rs1342508387 2200 dbSNP
rs1290043677 2202 dbSNP
rs1268482879 2203 dbSNP
rs560041107 2208 dbSNP
rs1232642078 2209 dbSNP
rs1003853289 2217 dbSNP
rs1341307963 2220 dbSNP
rs886876861 2225 dbSNP
rs925532163 2236 dbSNP
rs1468594920 2256 dbSNP
rs1211816620 2257 dbSNP
rs1290860465 2261 dbSNP
rs1437546947 2268 dbSNP
rs1180460807 2270 dbSNP
rs769789553 2271 dbSNP
rs953533852 2272 dbSNP
rs923370183 2273 dbSNP
rs1366153335 2274 dbSNP
rs1473512884 2277 dbSNP
rs1163411924 2284 dbSNP
rs976168666 2289 dbSNP
rs1309587777 2299 dbSNP
rs962355352 2309 dbSNP
rs1416854736 2310 dbSNP
rs747645268 2312 dbSNP
rs542054316 2320 dbSNP
rs1044999410 2321 dbSNP
rs744991 2322 dbSNP
rs1203332739 2352 dbSNP
rs1277190387 2355 dbSNP
rs915135842 2356 dbSNP
rs556287926 2387 dbSNP
rs1200346856 2390 dbSNP
rs952644504 2393 dbSNP
rs1181329408 2404 dbSNP
rs1424983797 2412 dbSNP
rs1460738512 2414 dbSNP
rs1238541548 2428 dbSNP
rs544351315 2430 dbSNP
rs576746922 2431 dbSNP
rs1002067423 2433 dbSNP
rs1305694837 2439 dbSNP
rs934641904 2443 dbSNP
rs905000510 2445 dbSNP
rs1272128288 2448 dbSNP
rs1300949196 2468 dbSNP
rs768269536 2485 dbSNP
rs550081582 2490 dbSNP
rs534197802 2494 dbSNP
rs567157832 2497 dbSNP
rs924698606 2505 dbSNP
rs1286213371 2513 dbSNP
rs533544445 2520 dbSNP
rs779598697 2521 dbSNP
rs1343235965 2524 dbSNP
rs59717571 2525 dbSNP
rs749615429 2526 dbSNP
rs1985249 2528 dbSNP
rs1050606659 2529 dbSNP
rs1353283331 2530 dbSNP
rs1170302754 2538 dbSNP
rs932169925 2542 dbSNP
rs1453477932 2548 dbSNP
rs1276009581 2551 dbSNP
rs1379196677 2553 dbSNP
rs1466469632 2560 dbSNP
rs550640936 2569 dbSNP
rs796707519 2570 dbSNP
rs371570390 2577 dbSNP
rs1161338187 2578 dbSNP
rs976578469 2580 dbSNP
rs1322743470 2582 dbSNP
rs962184371 2587 dbSNP
rs531350574 2588 dbSNP
rs1386462293 2594 dbSNP
rs984831081 2595 dbSNP
rs952014932 2601 dbSNP
rs1026917753 2611 dbSNP
rs1314332170 2616 dbSNP
rs1035214007 2638 dbSNP
rs1268052186 2639 dbSNP
rs1479505862 2640 dbSNP
rs1210039089 2641 dbSNP
rs1248176324 2642 dbSNP
rs1232261818 2648 dbSNP
rs571517915 2652 dbSNP
rs781460458 2653 dbSNP
rs1003243025 2654 dbSNP
rs1452302057 2656 dbSNP
rs1458811599 2660 dbSNP
rs1161459987 2661 dbSNP
rs576926603 2668 dbSNP
rs527550092 2669 dbSNP
rs560462863 2670 dbSNP
rs1010672778 2677 dbSNP
rs2011631 2678 dbSNP
rs1013830292 2679 dbSNP
rs1349168251 2689 dbSNP
rs751754802 2690 dbSNP
rs1268187635 2693 dbSNP
rs1310189739 2696 dbSNP
rs1052331169 2698 dbSNP
rs1242797744 2700 dbSNP
rs529890246 2702 dbSNP
rs1488652262 2707 dbSNP
rs1397653757 2714 dbSNP
rs1204162363 2719 dbSNP
rs56348712 2719 dbSNP
rs1298147363 2720 dbSNP
rs1182837620 2725 dbSNP
rs371749878 2725 dbSNP
rs1408757015 2742 dbSNP
rs1437783216 2744 dbSNP
rs1052596398 2745 dbSNP
rs1351176847 2746 dbSNP
rs1458662877 2748 dbSNP
rs1300744810 2752 dbSNP
rs1423386942 2756 dbSNP
rs1000500231 2757 dbSNP
rs1051205967 2758 dbSNP
rs903504705 2762 dbSNP
rs1050639296 2763 dbSNP
rs1314325754 2768 dbSNP
rs932201479 2780 dbSNP
rs766523851 2784 dbSNP
rs975596386 2785 dbSNP
rs543937243 2786 dbSNP
rs1417121317 2790 dbSNP
rs902083450 2795 dbSNP
rs1272151824 2797 dbSNP
rs1040584492 2805 dbSNP
rs940834606 2806 dbSNP
rs1236848979 2811 dbSNP
rs762803624 2812 dbSNP
rs1406948312 2815 dbSNP
rs1191756227 2819 dbSNP
rs147104848 2822 dbSNP
rs907983245 2823 dbSNP
rs985253469 2824 dbSNP
rs1238670981 2831 dbSNP
rs141867486 2833 dbSNP
rs1266604457 2843 dbSNP
rs1359083463 2849 dbSNP
rs983044561 2858 dbSNP
rs540234304 2860 dbSNP
rs930651078 2862 dbSNP
rs1034628157 2863 dbSNP
rs927241820 2867 dbSNP
rs1227160825 2869 dbSNP
rs1294952186 2869 dbSNP
rs1343968807 2873 dbSNP
rs1228846340 2884 dbSNP
rs980692732 2886 dbSNP
rs753292137 2887 dbSNP
rs750243274 2891 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084068. RNA binding protein: AGO2. Condition:CLIP_noemetine_SigmaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agacuaGUCCGUUUCAACGUCc 5'
                ||||   :||||||| 
Target 5' ------CAGG---GGUUGCAGu 3'
 		1 - 13
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084068
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_SigmaAb
Location of target site ENST00000571995.1 | 3UTR | CAGGGGUUGCAGUGAGCCGAGAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
313 hsa-miR-4772-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT079462 RAB40B RAB40B, member RAS oncogene family 2 2
MIRT092011 SNRK SNF related kinase 2 10
MIRT259504 TXLNG taxilin gamma 2 2
MIRT286668 ZNF207 zinc finger protein 207 2 2
MIRT393055 RSBN1L round spermatid basic protein 1 like 2 2
MIRT443335 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443430 MAPT microtubule associated protein tau 2 2
MIRT454267 PSMA1 proteasome subunit alpha 1 2 2
MIRT461774 MPDU1 mannose-P-dolichol utilization defect 1 2 2
MIRT473561 MATR3 matrin 3 2 2
MIRT495678 PRKD3 protein kinase D3 2 2
MIRT502649 DCTN5 dynactin subunit 5 2 8
MIRT503958 ZNF180 zinc finger protein 180 2 6
MIRT504114 GPR158 G protein-coupled receptor 158 2 2
MIRT513556 IL5 interleukin 5 2 2
MIRT529025 EXOC8 exocyst complex component 8 2 2
MIRT530632 PPIC peptidylprolyl isomerase C 2 4
MIRT536889 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT537224 GATA6 GATA binding protein 6 2 6
MIRT539006 AVL9 AVL9 cell migration associated 2 2
MIRT539129 ARHGEF17 Rho guanine nucleotide exchange factor 17 2 2
MIRT539572 CNKSR3 CNKSR family member 3 2 2
MIRT556145 MED12L mediator complex subunit 12 like 2 2
MIRT559481 ARL8A ADP ribosylation factor like GTPase 8A 2 2
MIRT560095 ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 2 2
MIRT561661 RNF11 ring finger protein 11 2 4
MIRT569672 SEC23B Sec23 homolog B, coat complex II component 2 4
MIRT571883 MSL2 MSL complex subunit 2 2 2
MIRT575071 Ets1 E26 avian leukemia oncogene 1, 5' domain 2 4
MIRT607053 IDS iduronate 2-sulfatase 2 2
MIRT607801 RHBDL2 rhomboid like 2 2 4
MIRT608145 SYAP1 synapse associated protein 1 2 4
MIRT609242 SERPINA4 serpin family A member 4 2 2
MIRT612060 PDGFRA platelet derived growth factor receptor alpha 2 2
MIRT615120 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT617270 EXOSC10 exosome component 10 2 2
MIRT617684 MAPKBP1 mitogen-activated protein kinase binding protein 1 2 2
MIRT618063 ZNF799 zinc finger protein 799 2 2
MIRT618101 PPP5D1 PPP5 tetratricopeptide repeat domain containing 1 2 2
MIRT618487 DENND5B DENN domain containing 5B 2 4
MIRT618801 SPATA21 spermatogenesis associated 21 2 2
MIRT618907 CDK9 cyclin dependent kinase 9 2 2
MIRT619392 RSPH3 radial spoke head 3 homolog 2 2
MIRT619896 NPTXR neuronal pentraxin receptor 2 2
MIRT620069 ZNF85 zinc finger protein 85 2 2
MIRT620085 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 2
MIRT620782 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT620859 SERPING1 serpin family G member 1 2 2
MIRT621161 RTTN rotatin 2 2
MIRT621217 LILRA2 leukocyte immunoglobulin like receptor A2 2 2
MIRT623445 KDM5A lysine demethylase 5A 2 2
MIRT623639 IDE insulin degrading enzyme 2 2
MIRT624190 DDX19B DEAD-box helicase 19B 2 2
MIRT624699 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT624906 CTCFL CCCTC-binding factor like 2 2
MIRT624954 SERF2 small EDRK-rich factor 2 2 2
MIRT625026 ZNF730 zinc finger protein 730 2 2
MIRT625117 SLC1A5 solute carrier family 1 member 5 2 2
MIRT625129 NUP93 nucleoporin 93 2 2
MIRT625145 ITPRIPL1 inositol 1,4,5-trisphosphate receptor interacting protein-like 1 2 2
MIRT625259 ZNF566 zinc finger protein 566 2 2
MIRT625280 PNPT1 polyribonucleotide nucleotidyltransferase 1 2 2
MIRT625331 TNFRSF13B TNF receptor superfamily member 13B 2 2
MIRT625466 ZNF135 zinc finger protein 135 2 2
MIRT625525 FGFR1 fibroblast growth factor receptor 1 2 2
MIRT625724 CXorf38 chromosome X open reading frame 38 2 2
MIRT625834 NXPE2 neurexophilin and PC-esterase domain family member 2 2 2
MIRT625905 LINC00632 long intergenic non-protein coding RNA 632 2 2
MIRT626017 XRCC2 X-ray repair cross complementing 2 2 2
MIRT626048 PDE4C phosphodiesterase 4C 2 2
MIRT626166 RRP1B ribosomal RNA processing 1B 2 2
MIRT626171 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT626348 PACS1 phosphofurin acidic cluster sorting protein 1 2 2
MIRT626362 DIS3L DIS3 like exosome 3'-5' exoribonuclease 2 2
MIRT626442 SRSF7 serine and arginine rich splicing factor 7 2 2
MIRT626532 EMCN endomucin 2 2
MIRT626575 MED7 mediator complex subunit 7 2 2
MIRT626639 ZNF551 zinc finger protein 551 2 2
MIRT626666 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT626681 CISD2 CDGSH iron sulfur domain 2 2 2
MIRT626772 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 2
MIRT626788 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT626821 PRR11 proline rich 11 2 2
MIRT626831 ZNF430 zinc finger protein 430 2 2
MIRT626884 PTCD3 pentatricopeptide repeat domain 3 2 2
MIRT626941 TTR transthyretin 2 2
MIRT626960 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627454 SYNRG synergin gamma 2 2
MIRT627788 RAB11FIP1 RAB11 family interacting protein 1 2 2
MIRT627821 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT627949 NMNAT1 nicotinamide nucleotide adenylyltransferase 1 2 2
MIRT627998 MELK maternal embryonic leucine zipper kinase 2 2
MIRT628019 MAP7 microtubule associated protein 7 2 2
MIRT628051 KIAA1468 KIAA1468 2 2
MIRT628129 HMGB1 high mobility group box 1 2 4
MIRT628143 HM13 histocompatibility minor 13 2 2
MIRT628237 FADS1 fatty acid desaturase 1 2 2
MIRT628794 A2ML1 alpha-2-macroglobulin like 1 2 2
MIRT628874 FAM177A1 family with sequence similarity 177 member A1 2 4
MIRT629251 KDM2B lysine demethylase 2B 2 2
MIRT629320 ZNF487P zinc finger protein 487 1 1
MIRT629361 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT629800 GPR82 G protein-coupled receptor 82 2 2
MIRT629919 POLR2D RNA polymerase II subunit D 2 2
MIRT630099 DCAF10 DDB1 and CUL4 associated factor 10 2 2
MIRT630487 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT630722 FPR1 formyl peptide receptor 1 2 2
MIRT631018 DNAJC22 DnaJ heat shock protein family (Hsp40) member C22 2 2
MIRT631073 ZNF829 zinc finger protein 829 2 2
MIRT631230 C7orf65 chromosome 7 open reading frame 65 2 2
MIRT631248 ABCB5 ATP binding cassette subfamily B member 5 2 2
MIRT631680 NQO2 N-ribosyldihydronicotinamide:quinone reductase 2 2 2
MIRT631780 IL17RA interleukin 17 receptor A 2 2
MIRT632044 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT632132 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT632202 ZKSCAN1 zinc finger with KRAB and SCAN domains 1 2 2
MIRT632410 SLC30A5 solute carrier family 30 member 5 2 2
MIRT632523 PSMB2 proteasome subunit beta 2 2 2
MIRT632547 PRPF4 pre-mRNA processing factor 4 2 2
MIRT632702 MTA3 metastasis associated 1 family member 3 2 2
MIRT633134 C6orf132 chromosome 6 open reading frame 132 2 2
MIRT633365 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT633551 ATAD3C ATPase family, AAA domain containing 3C 2 2
MIRT633698 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT633793 SOX7 SRY-box 7 2 2
MIRT634512 NKAP NFKB activating protein 2 2
MIRT634830 ARHGEF39 Rho guanine nucleotide exchange factor 39 2 2
MIRT634917 RBM4B RNA binding motif protein 4B 2 2
MIRT634972 C8orf17 chromosome 8 open reading frame 17 2 2
MIRT635107 MAVS mitochondrial antiviral signaling protein 2 2
MIRT635199 FXN frataxin 2 2
MIRT635407 KIAA1614 KIAA1614 2 2
MIRT635417 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT635433 LRP10 LDL receptor related protein 10 2 2
MIRT635484 ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 2 2
MIRT635513 C1orf64 steroid receptor associated and regulated protein 2 2
MIRT635617 ZNF439 zinc finger protein 439 2 2
MIRT635639 TRMT10B tRNA methyltransferase 10B 2 2
MIRT635736 IFNAR1 interferon alpha and beta receptor subunit 1 2 2
MIRT635897 SP110 SP110 nuclear body protein 2 2
MIRT635936 PLA2G12A phospholipase A2 group XIIA 2 2
MIRT636019 GNPNAT1 glucosamine-phosphate N-acetyltransferase 1 2 2
MIRT636277 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT636287 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT636344 PHAX phosphorylated adaptor for RNA export 2 2
MIRT636472 KLHL7 kelch like family member 7 2 2
MIRT636893 C5orf45 MRN complex interacting protein 2 2
MIRT636984 ZNF561 zinc finger protein 561 2 2
MIRT637041 FITM2 fat storage inducing transmembrane protein 2 2 2
MIRT637148 PCDHA6 protocadherin alpha 6 2 4
MIRT637369 ORAI2 ORAI calcium release-activated calcium modulator 2 2 4
MIRT637379 HINFP histone H4 transcription factor 2 2
MIRT637399 ZNF546 zinc finger protein 546 2 2
MIRT637721 MYOZ3 myozenin 3 2 2
MIRT637771 PDLIM3 PDZ and LIM domain 3 2 2
MIRT637905 FAM153B family with sequence similarity 153 member B 2 2
MIRT638129 UBXN7 UBX domain protein 7 2 2
MIRT638564 IFNE interferon epsilon 2 2
MIRT638581 HYPK huntingtin interacting protein K 2 2
MIRT638792 EDARADD EDAR associated death domain 2 2
MIRT638945 BMPR2 bone morphogenetic protein receptor type 2 2 2
MIRT640676 ARSK arylsulfatase family member K 2 2
MIRT641734 TXNL1 thioredoxin like 1 2 2
MIRT642163 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT642512 ORC6 origin recognition complex subunit 6 2 2
MIRT642622 CDKN3 cyclin dependent kinase inhibitor 3 2 2
MIRT642701 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT643550 C11orf70 chromosome 11 open reading frame 70 2 2
MIRT643868 COX20 COX20, cytochrome c oxidase assembly factor 2 2
MIRT643936 WIPF3 WAS/WASL interacting protein family member 3 2 2
MIRT644034 CENPM centromere protein M 2 2
MIRT644595 SPOP speckle type BTB/POZ protein 2 2
MIRT644693 ZNF320 zinc finger protein 320 2 2
MIRT645122 HES2 hes family bHLH transcription factor 2 2 2
MIRT645614 TSPAN6 tetraspanin 6 2 2
MIRT646260 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT646994 ZNF621 zinc finger protein 621 2 2
MIRT647549 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT648479 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT649069 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT649244 TRIM65 tripartite motif containing 65 2 2
MIRT649301 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT650124 G6PC glucose-6-phosphatase catalytic subunit 2 2
MIRT650167 USHBP1 USH1 protein network component harmonin binding protein 1 2 2
MIRT651263 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT652140 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT652159 TRIM66 tripartite motif containing 66 2 2
MIRT652673 TIMELESS timeless circadian clock 2 2
MIRT654237 RNF115 ring finger protein 115 2 2
MIRT655229 PEX5L peroxisomal biogenesis factor 5 like 2 2
MIRT655255 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT656064 MTMR10 myotubularin related protein 10 2 2
MIRT656575 LSM10 LSM10, U7 small nuclear RNA associated 2 2
MIRT656754 LDHA lactate dehydrogenase A 2 2
MIRT657687 GPR155 G protein-coupled receptor 155 2 2
MIRT657811 GJD3 gap junction protein delta 3 2 2
MIRT658403 FAM212B family with sequence similarity 212 member B 2 2
MIRT660211 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT660241 BMP7 bone morphogenetic protein 7 2 2
MIRT660450 ATG14 autophagy related 14 2 2
MIRT660546 ARHGAP29 Rho GTPase activating protein 29 2 2
MIRT660620 ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 2 2
MIRT660759 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT660987 ABHD2 abhydrolase domain containing 2 2 2
MIRT661037 HIATL2 major facilitator superfamily domain containing 14C 2 2
MIRT661047 RABAC1 Rab acceptor 1 2 2
MIRT661076 FFAR2 free fatty acid receptor 2 2 2
MIRT661152 ZNF101 zinc finger protein 101 2 2
MIRT661278 APOPT1 apoptogenic 1, mitochondrial 2 2
MIRT661521 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT661710 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT661721 KLF8 Kruppel like factor 8 2 3
MIRT661730 RAB9A RAB9A, member RAS oncogene family 2 2
MIRT662240 PGBD4 piggyBac transposable element derived 4 2 2
MIRT662337 MYLK3 myosin light chain kinase 3 2 2
MIRT662450 SEMA5A semaphorin 5A 2 2
MIRT662743 LRRC3C leucine rich repeat containing 3C 2 2
MIRT662769 HIST1H2AH histone cluster 1 H2A family member h 2 2
MIRT663012 KIAA1586 KIAA1586 2 2
MIRT663098 THEM4 thioesterase superfamily member 4 2 2
MIRT663800 BET1L Bet1 golgi vesicular membrane trafficking protein like 2 2
MIRT663878 CXorf56 chromosome X open reading frame 56 2 2
MIRT664679 TMEM19 transmembrane protein 19 2 2
MIRT664695 DBF4 DBF4 zinc finger 2 2
MIRT664762 MESDC2 mesoderm development LRP chaperone 2 2
MIRT664774 LIAS lipoic acid synthetase 2 2
MIRT664907 PDE6A phosphodiesterase 6A 2 2
MIRT664925 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT665244 ZNF384 zinc finger protein 384 2 2
MIRT665529 USP14 ubiquitin specific peptidase 14 2 2
MIRT665535 UROS uroporphyrinogen III synthase 2 2
MIRT665630 TSHZ2 teashirt zinc finger homeobox 2 2 2
MIRT665808 TMEM168 transmembrane protein 168 2 2
MIRT666151 SP2 Sp2 transcription factor 2 2
MIRT666649 RBM48 RNA binding motif protein 48 2 2
MIRT667212 NIPAL1 NIPA like domain containing 1 2 2
MIRT667514 LUC7L2 LUC7 like 2, pre-mRNA splicing factor 2 2
MIRT667541 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT667962 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT668004 HCFC2 host cell factor C2 2 2
MIRT668101 GK5 glycerol kinase 5 (putative) 2 2
MIRT668151 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT668254 FUT11 fucosyltransferase 11 2 2
MIRT668424 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT668468 FADS6 fatty acid desaturase 6 2 2
MIRT668849 CYCS cytochrome c, somatic 2 2
MIRT668985 CIAO1 cytosolic iron-sulfur assembly component 1 2 2
MIRT669020 MPZ myelin protein zero 2 2
MIRT669232 C7orf55-LUC7L2 C7orf55-LUC7L2 readthrough 2 2
MIRT671099 ZNF665 zinc finger protein 665 2 2
MIRT671496 SLC38A9 solute carrier family 38 member 9 2 2
MIRT672717 TMIGD2 transmembrane and immunoglobulin domain containing 2 2 2
MIRT672909 KRBA2 KRAB-A domain containing 2 2 2
MIRT672962 ZNF655 zinc finger protein 655 2 2
MIRT673609 HPSE heparanase 2 2
MIRT673740 TCF23 transcription factor 23 2 2
MIRT673755 ZNF333 zinc finger protein 333 2 2
MIRT673780 PROSER2 proline and serine rich 2 2 2
MIRT674217 FAM120AOS family with sequence similarity 120A opposite strand 2 2
MIRT674343 KCMF1 potassium channel modulatory factor 1 2 2
MIRT674756 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 2
MIRT674811 FAM229B family with sequence similarity 229 member B 2 2
MIRT675173 BPTF bromodomain PHD finger transcription factor 2 2
MIRT675265 ZNF431 zinc finger protein 431 2 2
MIRT675954 FOXK1 forkhead box K1 2 2
MIRT676155 OGFOD1 2-oxoglutarate and iron dependent oxygenase domain containing 1 2 2
MIRT676195 GSTM3 glutathione S-transferase mu 3 2 2
MIRT676437 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT676466 RACGAP1 Rac GTPase activating protein 1 2 2
MIRT676563 VSIG1 V-set and immunoglobulin domain containing 1 2 2
MIRT676715 METTL14 methyltransferase like 14 2 2
MIRT677197 MURC caveolae associated protein 4 2 2
MIRT677276 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT677350 POC1A POC1 centriolar protein A 2 2
MIRT677507 SLC10A6 solute carrier family 10 member 6 2 2
MIRT677552 C19orf52 translocase of inner mitochondrial membrane 29 2 2
MIRT677621 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT677690 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT677748 GNB4 G protein subunit beta 4 2 2
MIRT678106 MICA MHC class I polypeptide-related sequence A 2 2
MIRT678336 MCTS1 MCTS1, re-initiation and release factor 2 2
MIRT678454 GLYAT glycine-N-acyltransferase 2 2
MIRT678472 RNF222 ring finger protein 222 2 2
MIRT678560 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT679302 SSBP2 single stranded DNA binding protein 2 2 2
MIRT679371 GP2 glycoprotein 2 2 2
MIRT679380 WDR92 WD repeat domain 92 2 2
MIRT679575 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT679683 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT679876 SLC25A51 solute carrier family 25 member 51 2 2
MIRT680092 ETS1 ETS proto-oncogene 1, transcription factor 2 5
MIRT680470 C3 complement C3 2 2
MIRT683082 A1BG alpha-1-B glycoprotein 2 2
MIRT683905 PSMB9 proteasome subunit beta 9 2 2
MIRT684177 MOG myelin oligodendrocyte glycoprotein 2 2
MIRT686213 ZNF267 zinc finger protein 267 2 2
MIRT688737 CNDP1 carnosine dipeptidase 1 2 2
MIRT689035 ANGPTL3 angiopoietin like 3 2 2
MIRT690683 PTCHD3 patched domain containing 3 2 2
MIRT697761 USP37 ubiquitin specific peptidase 37 2 2
MIRT704407 CTPS1 CTP synthase 1 2 2
MIRT705016 CAMK2N1 calcium/calmodulin dependent protein kinase II inhibitor 1 2 2
MIRT709567 GYG2 glycogenin 2 2 2
MIRT709955 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT710001 TXNDC12 thioredoxin domain containing 12 2 2
MIRT710219 JMJD4 jumonji domain containing 4 2 2
MIRT710478 CDH5 cadherin 5 2 2
MIRT713074 ENTHD1 ENTH domain containing 1 2 2
MIRT713890 RNF19B ring finger protein 19B 2 2
MIRT715337 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT715989 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT720098 SPTLC3 serine palmitoyltransferase long chain base subunit 3 2 2
MIRT720981 METTL21A methyltransferase like 21A 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4772-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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