miRTarBase - #MIRT080233


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pre-miRNA Information
pre-miRNA hsa-mir-548c   
Genomic Coordinates chr12: 64622509 - 64622605
Description Homo sapiens miR-548c stem-loop
Comment Extensive cloning studies suggest that the 5' miRNA may be the predominant one .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-548c-3p
Sequence 61| CAAAAAUCUCAAUUACUUUUGC |82
Evidence Experimental
Experiments SAGE
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN23013696 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1396767933 3 dbSNP
rs1314622460 7 dbSNP
rs1226739912 9 dbSNP
rs780547012 11 dbSNP
rs747421587 12 dbSNP
rs1298302643 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SMAD4   
Synonyms DPC4, JIP, MADH4, MYHRS
Description SMAD family member 4
Transcript NM_005359   
Expression
Putative miRNA Targets on SMAD4
3'UTR of SMAD4
(miRNA target sites are highlighted)		 
>SMAD4|NM_005359|3'UTR
   1 GGTCTTTTACCGTTGGGGCCCTTAACCTTATCAGGATGGTGGACTACAAAATACAATCCTGTTTATAATCTGAAGATATA
  81 TTTCACTTTTGTTCTGCTTTATCTTTTCATAAAGGGTTGAAAATGTGTTTGCTGCCTTGCTCCTAGCAGACAGAAACTGG
 161 ATTAAAACAATTTTTTTTTTCCTCTTCAGAACTTGTCAGGCATGGCTCAGAGCTTGAAGATTAGGAGAAACACATTCTTA
 241 TTAATTCTTCACCTGTTATGTATGAAGGAATCATTCCAGTGCTAGAAAATTTAGCCCTTTAAAACGTCTTAGAGCCTTTT
 321 ATCTGCAGAACATCGATATGTATATCATTCTACAGAATAATCCAGTATTGCTGATTTTAAAGGCAGAGAAGTTCTCAAAG
 401 TTAATTCACCTATGTTATTTTGTGTACAAGTTGTTATTGTTGAACATACTTCAAAAATAATGTGCCATGTGGGTGAGTTA
 481 ATTTTACCAAGAGTAACTTTACTCTGTGTTTAAAAAGTAAGTTAATAATGTATTGTAATCTTTCATCCAAAATATTTTTT
 561 GCAAGTTATATTAGTGAAGATGGTTTCAATTCAGATTGTCTTGCAACTTCAGTTTTATTTTTGCCAAGGCAAAAAACTCT
 641 TAATCTGTGTGTATATTGAGAATCCCTTAAAATTACCAGACAAAAAAATTTAAAATTACGTTTGTTATTCCTAGTGGATG
 721 ACTGTTGATGAAGTATACTTTTCCCCTGTTAAACAGTAGTTGTATTCTTCTGTATTTCTAGGCACAAGGTTGGTTGCTAA
 801 GAAGCCTATAAGAGGAATTTCTTTTCCTTCATTCATAGGGAAAGGTTTTGTATTTTTTAAAACACTAAAAGCAGCGTCAC
 881 TCTACCTAATGTCTCACTGTTCTGCAAAGGTGGCAATGCTTAAACTAAATAATGAATAAACTGAATATTTTGGAAACTGC
 961 TAAATTCTATGTTAAATACTGTGCAGAATAATGGAAACATTACAGTTCATAATAGGTAGTTTGGATATTTTTGTACTTGA
1041 TTTGATGTGACTTTTTTTGGTATAATGTTTAAATCATGTATGTTATGATATTGTTTAAAATTCAGTTTTTGTATCTTGGG
1121 GCAAGACTGCAAACTTTTTTATATCTTTTGGTTATTCTAAGCCCTTTGCCATCAATGATCATATCAATTGGCAGTGACTT
1201 TGTATAGAGAATTTAAGTAGAAAAGTTGCAGATGTATTGACTGTACCACAGACACAATATGTATGCTTTTTACCTAGCTG
1281 GTAGCATAAATAAAACTGAATCTCAACATACAAAGTTGAATTCTAGGTTTGATTTTTAAGATTTTTTTTTTCTTTTGCAC
1361 TTTTGAGTCCAATCTCAGTGATGAGGTACCTTCTACTAAATGACAGGCAACAGCCAGTTCTATTGGGCAGCTTTGTTTTT
1441 TTCCCTCACACTCTACCGGGACTTCCCCATGGACATTGTGTATCATGTGTAGAGTTGGTTTTTTTTTTTTTTAATTTTTA
1521 TTTTACTATAGCAGAAATAGACCTGATTATCTACAAGATGATAAATAGATTGTCTACAGGATAAATAGTATGAAATAAAA
1601 TCAAGGATTATCTTTCAGATGTGTTTACTTTTGCCTGGAGAACTTTTAGCTATAGAAACACTTGTGTGATGATAGTCCTC
1681 CTTATATCACCTGGAATGAACACAGCTTCTACTGCCTTGCTCAGAAGGTCTTTTAAATAGACCATCCTAGAAACCACTGA
1761 GTTTGCTTATTTCTGTGATTTAAACATAGATCTTGATCCAAGCTACATGACTTTTGTCTTTAAATAACTTATCTACCACC
1841 TCATTTGTACTCTTGATTACTTACAAATTCTTTCAGTAAACACCTAATTTTCTTCTGTAAAAGTTTGGTGATTTAAGTTT
1921 TATTGGCAGTTTTATAAAAAGACATCTTCTCTAGAAATTGCTAACTTTAGGTCCATTTTACTGTGAATGAGGAATAGGAG
2001 TGAGTTTTAGAATAACAGATTTTTAAAAATCCAGATGATTTGATTAAAACCTTAATCATACATTGACATAATTCATTGCT
2081 TCTTTTTTTTGAGATATGGAGTCTTGCTGTGTTGCCCAGGCAGGAGTGCAGTGGTATGATCTCAGCTCACTGCAACCTCT
2161 GCCTCCCGGGTTCAACTGATTCTCCTGCCTCAGCCTCCCTGGTAGCTAGGATTACAGGTGCCCGCCACCATGCCTGGCTA
2241 ACTTTTGTAGTTTTAGTAGAGACGGGGTTTTGCCTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCATCC
2321 ACCTTGGCCTCCCAAAGTGCTGGGATTACGGGCGTGAGCCACTGTCCCTGGCCTCATTGTTCCCTTTTCTACTTTAAGGA
2401 AAGTTTTCATGTTTAATCATCTGGGGAAAGTATGTGAAAAATATTTGTTAAGAAGTATCTCTTTGGAGCCAAGCCACCTG
2481 TCTTGGTTTCTTTCTACTAAGAGCCATAAAGTATAGAAATACTTCTAGTTGTTAAGTGCTTATATTTGTACCTAGATTTA
2561 GTCACACGCTTTTGAGAAAACATCTAGTATGTTATGATCAGCTATTCCTGAGAGCTTGGTTGTTAATCTATATTTCTATT
2641 TCTTAGTGGTAGTCATCTTTGATGAATAAGACTAAAGATTCTCACAGGTTTAAAATTTTATGTCTACTTTAAGGGTAAAA
2721 TTATGAGGTTATGGTTCTGGGTGGGTTTTCTCTAGCTAATTCATATCTCAAAGAGTCTCAAAATGTTGAATTTCAGTGCA
2801 AGCTGAATGAGAGATGAGCCATGTACACCCACCGTAAGACCTCATTCCATGTTTGTCCAGTGCCTTTCAGTGCATTATCA
2881 AAGGGAATCCTTCATGGTGTTGCCTTTATTTTCCGGGGAGTAGATCGTGGGATATAGTCTATCTCATTTTTAATAGTTTA
2961 CCGCCCCTGGTATACAAAGATAATGACAATAAATCACTGCCATATAACCTTGCTTTTTCCAGAAACATGGCTGTTTTGTA
3041 TTGCTGTAACCACTAAATAGGTTGCCTATACCATTCCTCCTGTGAACAGTGCAGATTTACAGGTTGCATGGTCTGGCTTA
3121 AGGAGAGCCATACTTGAGACATGTGAGTAAACTGAACTCATATTAGCTGTGCTGCATTTCAGACTTAAAATCCATTTTTG
3201 TGGGGCAGGGTGTGGTGTGTAAAGGGGGGTGTTTGTAATACAAGTTGAAGGCAAAATAAAATGTCCTGTCTCCCAGATGA
3281 TATACATCTTATTATTTTTAAAGTTTATTGCTAATTGTAGGAAGGTGAGTTGCAGGTATCTTTGACTATGGTCATCTGGG
3361 GAAGGAAAATTTTACATTTTACTATTAATGCTCCTTAAGTGTCTATGGAGGTTAAAGAATAAAATGGTAAATGTTTCTGT
3441 GCCTGGTTTGATGGTAACTGGTTAATAGTTACTCACCATTTTATGCAGAGTCACATTAGTTCACACCCTTTCTGAGAGCC
3521 TTTTGGGAGAAGCAGTTTTATTCTCTGAGTGGAACAGAGTTCTTTTTGTTGATAATTTCTAGTTTGCTCCCTTCGTTATT
3601 GCCAACTTTACTGGCATTTTATTTAATGATAGCAGATTGGGAAAATGGCAAATTTAGGTTACGGAGGTAAATGAGTATAT
3681 GAAAGCAATTACCTCTAAAGCCAGTTAACAATTATTTTGTAGGTGGGGTACACTCAGCTTAAAGTAATGCATTTTTTTTT
3761 CCCGTAAAGGCAGAATCCATCTTGTTGCAGATAGCTATCTAAATAATCTCATATCCTCTTTTGCAAAGACTACAGAGAAT
3841 AGGCTATGACAATCTTGTTCAAGCCTTTCCATTTTTTTCCCTGATAACTAAGTAATTTCTTTGAACATACCAAGAAGTAT
3921 GTAAAAAGTCCATGGCCTTATTCATCCACAAAGTGGCATCCTAGGCCCAGCCTTATCCCTAGCAGTTGTCCCAGTGCTGC
4001 TAGGTTGCTTATCTTGTTTATCTGGAATCACTGTGGAGTGAAATTTTCCACATCATCCAGAATTGCCTTATTTAAGAAGT
4081 AAAACGTTTTAATTTTTAGCCTTTTTTTGGTGGAGTTATTTAATATGTATATCAGAGGATATACTAGATGGTAACATTTC
4161 TTTCTGTGCTTGGCTATCTTTGTGGACTTCAGGGGCTTCTAAAACAGACAGGACTGTGTTGCCTTTACTAAATGGTCTGA
4241 GACAGCTATGGTTTTGAATTTTTAGTTTTTTTTTTTTAACCCACTTCCCCTCCTGGTCTCTTCCCTCTCTGATAATTACC
4321 ATTCATATGTGAGTGTTAGTGTGCCTCCTTTTAGCATTTTCTTCTTCTCTTTCTGATTCTTCATTTCTGACTGCCTAGGC
4401 AAGGAAACCAGATAACCAAACTTACTAGAACGTTCTTTAAAACACAAGTACAAACTCTGGGACAGGACCCAAGACACTTT
4481 CCTGTGAAGTGCTGAAAAAGACCTCATTGTATTGGCATTTGATATCAGTTTGATGTAGCTTAGAGTGCTTCCTGATTCTT
4561 GCTGAGTTTCAGGTAGTTGAGATAGAGAGAAGTGAGTCATATTCATATTTTCCCCCTTAGAATAATATTTTGAAAGGTTT
4641 CATTGCTTCCACTTGAATGCTGCTCTTACAAAAACTGGGGTTACAAGGGTTACTAAATTAGCATCAGTAGCCAGAGGCAA
4721 TACCGTTGTCTGGAGGACACCAGCAAACAACACACAACAAAGCAAAACAAACCTTGGGAAACTAAGGCCATTTGTTTTGT
4801 TTTGGTGTCCCCTTTGAAGCCCTGCCTTCTGGCCTTACTCCTGTACAGATATTTTTGACCTATAGGTGCCTTTATGAGAA
4881 TTGAGGGTCTGACATCCTGCCCCAAGGAGTAGCTAAAGTAATTGCTAGTGTTTTCAGGGATTTTAACATCAGACTGGAAT
4961 GAATGAATGAAACTTTTTGTCCTTTTTTTTTCTGTTTTTTTTTTTCTAATGTAGTAAGGACTAAGGAAAACCTTTGGTGA
5041 AGACAATCATTTCTCTCTGTTGATGTGGATACTTTTCACACCGTTTATTTAAATGCTTTCTCAATAGGTCCAGAGCCAGT
5121 GTTCTTGTTCAACCTGAAAGTAATGGCTCTGGGTTGGGCCAGACAGTTGCACTCTCTAGTTTGCCCTCTGCCACAAATTT
5201 GATGTGTGACCTTTGGGCAAGTCATTTATCTTCTCTGGGCCTTAGTTGCCTCATCTGTAAAATGAGGGAGTTGGAGTAGA
5281 TTAATTATTCCAGCTCTGAAATTCTAAGTGACCTTGGCTACCTTGCAGCAGTTTTGGATTTCTTCCTTATCTTTGTTCTG
5361 CTGTTTGAGGGGGCTTTTTACTTATTTCCATGTTATTCAAAGGAGACTAGGCTTGATATTTTATTACTGTTCTTTTATGG
5441 ACAAAAGGTTACATAGTATGCCCTTAAGACTTAATTTTAACCAAAGGCCTAGCACCACCTTAGGGGCTGCAATAAACACT
5521 TAACGCGCGTGCGCACGCGCGCGCGCACACACACACACACACACACACACACACACAGGTCAGAGTTTAAGGCTTTCGAG
5601 TCATGACATTCTAGCTTTTGAATTGCGTGCACACACACACGCACGCACACACTCTGGTCAGAGTTTATTAAGGCTTTCGA
5681 GTCATGACATTATAGCTTTTGAGTTGGTGTGTGTGACACCACCCTCCTAAGTGGTGTGTGCTTGTAATTTTTTTTTTCAG
5761 TGAAAATGGATTGAAAACCTGTTGTTAATGCTTAGTGATATTATGCTCAAAACAAGGAAATTCCCTTGAACCGTGTCAAT
5841 TAAACTGGTTTATATGACTCAAGAAAACAATACCAGTAGATGATTATTAACTTTATTCTTGGCTCTTTTTAGGTCCATTT
5921 TGATTAAGTGACTTTTGGCTGGATCATTCAGAGCTCTCTTCTAGCCTACCCTTGGATGAGTACAATTAATGAAATTCATA
6001 TTTTCAAGGACCTGGGAGCCTTCCTTGGGGCTGGGTTGAGGGTGGGGGGTTGGGGAGTCCTGGTAGAGGCCAGCTTTGTG
6081 GTAGCTGGAGAGGAAGGGATGAAACCAGCTGCTGTTGCAAAGGCTGCTTGTCATTGATAGAAGGACTCACGGGCTTGGAT
6161 TGATTAAGACTAAACATGGAGTTGGCAAACTTTCTTCAAGTATTGAGTTCTGTTCAATGCATTGGACATGTGATTTAAGG
6241 GAAAAGTGTGAATGCTTATAGATGATGAAAACCTGGTGGGCTGCAGAGCCCAGTTTAGAAGAAGTGAGTTGGGGGTTGGG
6321 GACAGATTTGGTGGTGGTATTTCCCAACTGTTTCCTCCCCTAAATTCAGAGGAATGCAGCTATGCCAGAAGCCAGAGAAG
6401 AGCCACTCGTAGCTTCTGCTTTGGGGACAACTGGTCAGTTGAAAGTCCCAGGAGTTCCTTTGTGGCTTTCTGTATACTTT
6481 TGCCTGGTTAAAGTCTGTGGCTAAAAAATAGTCGAACCTTTCTTGAGAACTCTGTAACAAAGTATGTTTTTGATTAAAAG
6561 AGAAAGCCAACTAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgUUUUCAUUAA--CUCUAAAAAc 5'
            | |:|||:||  || |||||| 
Target 5' taATAGGTAGTTTGGATATTTTTg 3'
 1010 - 1033 142.00 -9.60
2 
miRNA  3' cguUUUCAUUAA-------------CUCUAAAAac 5'
             |||||||||             |:||||||  
Target 5' gctAAAGTAATTGCTAGTGTTTTCAGGGATTTTaa 3'
 4912 - 4946 139.00 -11.30
3 
miRNA  3' cguUUUCAUUAACUCUAAAAAc 5'
             ||||||||  : |||||| 
Target 5' cttAAAGTAAT--GCATTTTTt 3'
 3738 - 3757 139.00 -6.90
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
492457 2 ClinVar
630655 2 ClinVar
486984 5 ClinVar
628132 5 ClinVar
919511 7 ClinVar
139220 12 ClinVar
379499 13 ClinVar
630492 14 ClinVar
628094 15 ClinVar
630178 15 ClinVar
924821 20 ClinVar
327112 31 ClinVar
327113 82 ClinVar
889543 171 ClinVar
327114 203 ClinVar
327115 219 ClinVar
327116 242 ClinVar
890202 246 ClinVar
890774 260 ClinVar
890775 333 ClinVar
327117 335 ClinVar
892014 364 ClinVar
327118 413 ClinVar
889605 580 ClinVar
889606 581 ClinVar
889607 606 ClinVar
327119 686 ClinVar
890254 705 ClinVar
890821 721 ClinVar
890822 746 ClinVar
327120 838 ClinVar
327121 851 ClinVar
892059 937 ClinVar
888595 970 ClinVar
888596 1037 ClinVar
327122 1068 ClinVar
890298 1142 ClinVar
327123 1169 ClinVar
327124 1178 ClinVar
327125 1180 ClinVar
327126 1188 ClinVar
327127 1278 ClinVar
890862 1316 ClinVar
892096 1387 ClinVar
327128 1458 ClinVar
327129 1499 ClinVar
888649 1500 ClinVar
888650 1503 ClinVar
888651 1514 ClinVar
327130 1561 ClinVar
890354 1609 ClinVar
890355 1660 ClinVar
890356 1662 ClinVar
890916 1787 ClinVar
327131 1802 ClinVar
327132 1813 ClinVar
327133 1821 ClinVar
327134 1865 ClinVar
327135 1867 ClinVar
888706 1875 ClinVar
888707 2100 ClinVar
327136 2123 ClinVar
890411 2216 ClinVar
890980 2218 ClinVar
327137 2354 ClinVar
327138 2355 ClinVar
327139 2362 ClinVar
327140 2462 ClinVar
327141 2489 ClinVar
888777 2562 ClinVar
327142 2631 ClinVar
327143 2675 ClinVar
890485 2676 ClinVar
327144 2683 ClinVar
327145 2694 ClinVar
327146 2705 ClinVar
327147 2794 ClinVar
327148 2797 ClinVar
891042 2898 ClinVar
327149 2915 ClinVar
892266 2942 ClinVar
327150 2963 ClinVar
327151 2968 ClinVar
327152 2990 ClinVar
327153 3110 ClinVar
888863 3110 ClinVar
327154 3187 ClinVar
890563 3224 ClinVar
891129 3227 ClinVar
327155 3287 ClinVar
327156 3399 ClinVar
327157 3507 ClinVar
327158 3639 ClinVar
888928 3663 ClinVar
888929 3680 ClinVar
888930 3747 ClinVar
327159 3764 ClinVar
327160 3844 ClinVar
327161 3872 ClinVar
890628 3951 ClinVar
891180 4067 ClinVar
327162 4086 ClinVar
891181 4263 ClinVar
327163 4379 ClinVar
327164 4584 ClinVar
327165 4644 ClinVar
888985 4708 ClinVar
327166 4749 ClinVar
327167 4863 ClinVar
327168 4867 ClinVar
327169 4983 ClinVar
327170 4988 ClinVar
327171 4995 ClinVar
327172 5081 ClinVar
327173 5084 ClinVar
327174 5097 ClinVar
327175 5132 ClinVar
327176 5171 ClinVar
327177 5236 ClinVar
327178 5260 ClinVar
889049 5283 ClinVar
327179 5420 ClinVar
327180 5531 ClinVar
327181 5531 ClinVar
889738 5535 ClinVar
327182 5536 ClinVar
327183 5536 ClinVar
327184 5536 ClinVar
327186 5536 ClinVar
327187 5536 ClinVar
327188 5536 ClinVar
889739 5542 ClinVar
891286 5543 ClinVar
327185 5546 ClinVar
327189 5546 ClinVar
327190 5546 ClinVar
327191 5546 ClinVar
327192 5546 ClinVar
327193 5546 ClinVar
327194 5546 ClinVar
327195 5546 ClinVar
327196 5546 ClinVar
327197 5546 ClinVar
327198 5546 ClinVar
892481 5548 ClinVar
892482 5550 ClinVar
327199 5552 ClinVar
889104 5554 ClinVar
889105 5556 ClinVar
889106 5558 ClinVar
327200 5577 ClinVar
327201 5579 ClinVar
889799 5610 ClinVar
327202 5628 ClinVar
327203 5630 ClinVar
891344 5632 ClinVar
327204 5689 ClinVar
891345 5711 ClinVar
892539 5746 ClinVar
327205 5748 ClinVar
327206 5792 ClinVar
327207 5802 ClinVar
889181 5834 ClinVar
327208 5861 ClinVar
327209 5875 ClinVar
327210 5986 ClinVar
327211 5995 ClinVar
327212 6010 ClinVar
327213 6058 ClinVar
327214 6158 ClinVar
327215 6351 ClinVar
327216 6409 ClinVar
327217 6424 ClinVar
327218 6493 ClinVar
327219 6514 ClinVar
889242 6523 ClinVar
COSM308304 1 COSMIC
COSM4728234 1 COSMIC
COSN30495899 4 COSMIC
COSN31785303 12 COSMIC
COSN30500677 18 COSMIC
COSN31505255 20 COSMIC
COSN30471365 56 COSMIC
COSN22471403 104 COSMIC
COSN30165974 105 COSMIC
COSN18741399 181 COSMIC
COSN29723074 181 COSMIC
COSN31523785 223 COSMIC
COSN30175978 414 COSMIC
COSN31535566 470 COSMIC
COSN31543257 560 COSMIC
COSN31518157 567 COSMIC
COSN25828165 814 COSMIC
COSN25669729 941 COSMIC
COSN5428224 950 COSMIC
COSN19216519 1078 COSMIC
COSN31539930 1207 COSMIC
COSN31548938 1224 COSMIC
COSN29633347 1352 COSMIC
COSN25582378 1443 COSMIC
COSN19562985 1500 COSMIC
COSN27435422 1513 COSMIC
COSN14594150 1514 COSMIC
COSN32065244 1521 COSMIC
COSN21963459 1699 COSMIC
COSN5428225 2169 COSMIC
COSN29314172 2267 COSMIC
COSN31961435 2362 COSMIC
COSN22318719 3192 COSMIC
COSN2461616 3223 COSMIC
COSN22247728 3663 COSMIC
COSN22043980 4085 COSMIC
COSN15361017 4141 COSMIC
COSN25787568 4245 COSMIC
COSN25015395 4302 COSMIC
COSN7361782 4339 COSMIC
COSN25409685 4677 COSMIC
COSN23736625 4680 COSMIC
COSN29931198 4720 COSMIC
COSN27526490 5006 COSMIC
COSN22734094 5399 COSMIC
COSN20115001 5536 COSMIC
COSN20115002 5542 COSMIC
COSN32062039 5578 COSMIC
COSN25908542 5708 COSMIC
COSN29560424 5758 COSMIC
COSN7361783 5855 COSMIC
COSN20115003 5864 COSMIC
COSN25286941 5953 COSMIC
COSN26960273 5995 COSMIC
COSN6126068 6014 COSMIC
COSN32055911 6085 COSMIC
COSN216758 6139 COSMIC
COSN25658885 6166 COSMIC
COSN7361784 6451 COSMIC
COSN20887350 6533 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1176679575 5 dbSNP
rs11663402 12 dbSNP
rs148687037 13 dbSNP
rs1039813805 14 dbSNP
rs989027869 15 dbSNP
rs772351886 17 dbSNP
rs1425656270 18 dbSNP
rs1165935469 21 dbSNP
rs374562658 27 dbSNP
rs767288576 31 dbSNP
rs1298180219 34 dbSNP
rs771022919 35 dbSNP
rs776614361 37 dbSNP
rs760084081 40 dbSNP
rs1383496342 41 dbSNP
rs765726171 46 dbSNP
rs1272286495 47 dbSNP
rs1305927735 53 dbSNP
rs1304506555 54 dbSNP
rs1475409125 60 dbSNP
rs1421930494 63 dbSNP
rs1202095507 64 dbSNP
rs1383349138 80 dbSNP
rs886053894 82 dbSNP
rs906014700 85 dbSNP
rs1449306211 88 dbSNP
rs1274512703 90 dbSNP
rs1046900144 91 dbSNP
rs1049875 92 dbSNP
rs1048165207 95 dbSNP
rs888115189 97 dbSNP
rs1225071196 100 dbSNP
rs1345951480 110 dbSNP
rs1274420420 112 dbSNP
rs886926721 116 dbSNP
rs1003857873 117 dbSNP
rs753087904 128 dbSNP
rs1015532161 157 dbSNP
rs1311986649 165 dbSNP
rs563321159 170 dbSNP
rs1179236471 171 dbSNP
rs199787250 171 dbSNP
rs571626382 171 dbSNP
rs998092904 171 dbSNP
rs1429032593 175 dbSNP
rs1190210826 176 dbSNP
rs1265378237 181 dbSNP
rs1462198844 182 dbSNP
rs1198543668 185 dbSNP
rs1476868909 188 dbSNP
rs550836152 190 dbSNP
rs755748098 195 dbSNP
rs1234110198 196 dbSNP
rs765823244 203 dbSNP
rs532149207 205 dbSNP
rs1470854263 209 dbSNP
rs1456950092 215 dbSNP
rs886053895 219 dbSNP
rs1256038454 221 dbSNP
rs766473122 223 dbSNP
rs1012213764 226 dbSNP
rs1277727742 231 dbSNP
rs1217684850 232 dbSNP
rs1177442998 233 dbSNP
rs1280188823 234 dbSNP
rs978821022 240 dbSNP
rs1024058106 241 dbSNP
rs886053896 242 dbSNP
rs753295366 246 dbSNP
rs1470596317 254 dbSNP
rs1178398899 260 dbSNP
rs1003596988 263 dbSNP
rs1031074239 271 dbSNP
rs956851835 273 dbSNP
rs956061894 279 dbSNP
rs1235848077 281 dbSNP
rs1185336240 283 dbSNP
rs1461765879 290 dbSNP
rs1236652069 297 dbSNP
rs988745383 306 dbSNP
rs552459667 307 dbSNP
rs917246071 316 dbSNP
rs565996294 322 dbSNP
rs915490796 324 dbSNP
rs980379387 328 dbSNP
rs964654693 332 dbSNP
rs975068806 333 dbSNP
rs534790830 335 dbSNP
rs1301436426 336 dbSNP
rs1398229616 337 dbSNP
rs548116204 340 dbSNP
rs930794546 343 dbSNP
rs1418776525 345 dbSNP
rs1048190242 347 dbSNP
rs1298964331 351 dbSNP
rs1424306360 356 dbSNP
rs888167805 358 dbSNP
rs939737709 364 dbSNP
rs933672523 370 dbSNP
rs1242501035 373 dbSNP
rs751626446 374 dbSNP
rs1036721397 388 dbSNP
rs900832048 391 dbSNP
rs1046826879 397 dbSNP
rs28403611 413 dbSNP
rs529429248 414 dbSNP
rs1324673375 424 dbSNP
rs1321216731 438 dbSNP
rs764693044 450 dbSNP
rs1216845398 453 dbSNP
rs1049630149 461 dbSNP
rs191822473 463 dbSNP
rs941195963 467 dbSNP
rs529897551 472 dbSNP
rs1398974263 476 dbSNP
rs1358287676 486 dbSNP
rs1439051547 489 dbSNP
rs556134005 490 dbSNP
rs1457933185 491 dbSNP
rs1038619760 503 dbSNP
rs1204689751 521 dbSNP
rs757935348 522 dbSNP
rs999964540 522 dbSNP
rs1487330382 529 dbSNP
rs1201098573 531 dbSNP
rs1429777394 536 dbSNP
rs1192715701 539 dbSNP
rs1476950176 544 dbSNP
rs1271253245 545 dbSNP
rs894353247 550 dbSNP
rs1210670369 551 dbSNP
rs1033071876 562 dbSNP
rs1391878028 565 dbSNP
rs1207244334 566 dbSNP
rs1263822459 566 dbSNP
rs1308641345 571 dbSNP
rs1013268028 580 dbSNP
rs1421486746 581 dbSNP
rs1347817437 583 dbSNP
rs142236156 584 dbSNP
rs1387004335 587 dbSNP
rs79955608 590 dbSNP
rs537321708 595 dbSNP
rs796164052 601 dbSNP
rs758658410 627 dbSNP
rs1169899547 631 dbSNP
rs1400998666 631 dbSNP
rs1463828179 631 dbSNP
rs1431182945 636 dbSNP
rs751277312 637 dbSNP
rs1432893434 644 dbSNP
rs538654348 659 dbSNP
rs1305141215 664 dbSNP
rs1265325146 677 dbSNP
rs1003524800 679 dbSNP
rs980769521 682 dbSNP
rs1458290245 683 dbSNP
rs16952798 686 dbSNP
rs386803201 686 dbSNP
rs956822760 689 dbSNP
rs984985256 692 dbSNP
rs1264205139 698 dbSNP
rs747355315 699 dbSNP
rs1022890354 700 dbSNP
rs964306349 705 dbSNP
rs1377031585 714 dbSNP
rs371124732 715 dbSNP
rs976054814 721 dbSNP
rs922869815 727 dbSNP
rs1224279475 735 dbSNP
rs1269081475 736 dbSNP
rs757405718 738 dbSNP
rs1465713582 739 dbSNP
rs955021109 743 dbSNP
rs781461730 752 dbSNP
rs1161597412 755 dbSNP
rs796352880 763 dbSNP
rs1036773038 765 dbSNP
rs922267100 771 dbSNP
rs908256558 772 dbSNP
rs556941805 776 dbSNP
rs1177297125 786 dbSNP
rs1475727439 792 dbSNP
rs933630194 797 dbSNP
rs1162550710 805 dbSNP
rs941110539 808 dbSNP
rs183984903 809 dbSNP
rs1343336534 811 dbSNP
rs1253841144 813 dbSNP
rs1241872544 814 dbSNP
rs190076139 835 dbSNP
rs886053897 838 dbSNP
rs1444443247 840 dbSNP
rs1366507249 841 dbSNP
rs1384970948 846 dbSNP
rs889684258 846 dbSNP
rs886053898 851 dbSNP
rs973909571 852 dbSNP
rs1328534499 853 dbSNP
rs1420603337 864 dbSNP
rs1379760980 865 dbSNP
rs1054241840 867 dbSNP
rs35675831 867 dbSNP
rs1446946547 868 dbSNP
rs1369499052 873 dbSNP
rs561356108 876 dbSNP
rs948610109 877 dbSNP
rs1264371580 880 dbSNP
rs1045607216 884 dbSNP
rs907168748 897 dbSNP
rs1247447034 900 dbSNP
rs781016570 900 dbSNP
rs1291864418 902 dbSNP
rs1284664064 903 dbSNP
rs939349814 916 dbSNP
rs1010312541 917 dbSNP
rs1357886928 920 dbSNP
rs1284643918 932 dbSNP
rs868029566 936 dbSNP
rs1052395566 938 dbSNP
rs1338469967 942 dbSNP
rs1320118279 943 dbSNP
rs892515562 944 dbSNP
rs971808024 946 dbSNP
rs1011429153 959 dbSNP
rs1296602993 970 dbSNP
rs745934938 970 dbSNP
rs1391547677 973 dbSNP
rs1163123489 977 dbSNP
rs769911817 981 dbSNP
rs1375111851 983 dbSNP
rs1194911958 987 dbSNP
rs1477714547 989 dbSNP
rs543950258 1002 dbSNP
rs1214010439 1005 dbSNP
rs574464949 1015 dbSNP
rs1446369550 1017 dbSNP
rs1290043885 1031 dbSNP
rs1209159391 1034 dbSNP
rs1034748949 1037 dbSNP
rs567638921 1040 dbSNP
rs1218958191 1046 dbSNP
rs541221575 1052 dbSNP
rs563382618 1058 dbSNP
rs908073564 1063 dbSNP
rs542839921 1068 dbSNP
rs1323022568 1081 dbSNP
rs962167379 1085 dbSNP
rs1399204331 1088 dbSNP
rs1387626514 1091 dbSNP
rs1172053553 1095 dbSNP
rs1401590984 1112 dbSNP
rs1334089489 1114 dbSNP
rs972894678 1120 dbSNP
rs552224002 1122 dbSNP
rs1404621357 1133 dbSNP
rs1478842794 1134 dbSNP
rs1455038503 1135 dbSNP
rs1197605772 1138 dbSNP
rs1449401639 1145 dbSNP
rs1369789072 1149 dbSNP
rs1199196013 1150 dbSNP
rs1315197997 1160 dbSNP
rs138404813 1169 dbSNP
rs886053899 1178 dbSNP
rs10470 1180 dbSNP
rs762480216 1182 dbSNP
rs375691219 1185 dbSNP
rs1015286875 1186 dbSNP
rs181664459 1188 dbSNP
rs1054293517 1190 dbSNP
rs962462502 1194 dbSNP
rs974217403 1203 dbSNP
rs1446772303 1205 dbSNP
rs1351143810 1219 dbSNP
rs1398554636 1226 dbSNP
rs1199736203 1232 dbSNP
rs1425374409 1235 dbSNP
rs1171670202 1240 dbSNP
rs1276233071 1242 dbSNP
rs891640010 1247 dbSNP
rs763995065 1248 dbSNP
rs915687136 1272 dbSNP
rs749213039 1273 dbSNP
rs1236114359 1276 dbSNP
rs886053900 1278 dbSNP
rs945862435 1280 dbSNP
rs1046245320 1292 dbSNP
rs907313259 1297 dbSNP
rs1355935998 1298 dbSNP
rs548358195 1307 dbSNP
rs887767746 1312 dbSNP
rs1006483392 1316 dbSNP
rs1015144489 1342 dbSNP
rs962221184 1342 dbSNP
rs976250322 1342 dbSNP
rs1432541817 1343 dbSNP
rs1439113626 1353 dbSNP
rs78407704 1357 dbSNP
rs568213415 1358 dbSNP
rs928523155 1359 dbSNP
rs185104256 1360 dbSNP
rs1052365279 1368 dbSNP
rs892477970 1370 dbSNP
rs753807499 1371 dbSNP
rs549821029 1373 dbSNP
rs910921723 1381 dbSNP
rs553408737 1387 dbSNP
rs1172418248 1388 dbSNP
rs1044193883 1392 dbSNP
rs1427608426 1394 dbSNP
rs899947247 1401 dbSNP
rs1208280324 1405 dbSNP
rs996981761 1409 dbSNP
rs199846258 1411 dbSNP
rs1471264799 1413 dbSNP
rs1337916021 1436 dbSNP
rs569828346 1443 dbSNP
rs1398943845 1451 dbSNP
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rs34542515 1458 dbSNP
rs886053901 1458 dbSNP
rs1004481168 1459 dbSNP
rs1015876625 1471 dbSNP
rs1389115134 1472 dbSNP
rs1282861254 1475 dbSNP
rs1330309205 1481 dbSNP
rs945940123 1486 dbSNP
rs1045592037 1487 dbSNP
rs907028123 1488 dbSNP
rs1281191574 1493 dbSNP
rs1342944351 1495 dbSNP
rs1478691740 1499 dbSNP
rs755827115 1499 dbSNP
rs879111241 1499 dbSNP
rs886053902 1499 dbSNP
rs962674023 1499 dbSNP
rs973805114 1500 dbSNP
rs1224074483 1503 dbSNP
rs1023129132 1504 dbSNP
rs1257282099 1509 dbSNP
rs937475138 1513 dbSNP
rs75142398 1514 dbSNP
rs1055851642 1516 dbSNP
rs887777645 1519 dbSNP
rs1043975506 1521 dbSNP
rs1438654997 1525 dbSNP
rs1006201326 1526 dbSNP
rs538619979 1529 dbSNP
rs1278372251 1543 dbSNP
rs969842987 1546 dbSNP
rs1177799131 1550 dbSNP
rs1458329427 1559 dbSNP
rs1423445024 1561 dbSNP
rs886053903 1561 dbSNP
rs1162740877 1570 dbSNP
rs981203374 1571 dbSNP
rs558556719 1577 dbSNP
rs998160916 1578 dbSNP
rs1030541197 1582 dbSNP
rs1193198612 1587 dbSNP
rs566346771 1597 dbSNP
rs535046633 1598 dbSNP
rs1385907632 1608 dbSNP
rs1269516250 1609 dbSNP
rs1191796141 1617 dbSNP
rs555248411 1618 dbSNP
rs56734884 1619 dbSNP
rs988668343 1620 dbSNP
rs1347178902 1622 dbSNP
rs914532074 1624 dbSNP
rs985235263 1636 dbSNP
rs1017940704 1651 dbSNP
rs1217603658 1651 dbSNP
rs1405260317 1653 dbSNP
rs574896468 1660 dbSNP
rs989803194 1662 dbSNP
rs1366291512 1664 dbSNP
rs1305753488 1665 dbSNP
rs145643623 1670 dbSNP
rs946024358 1673 dbSNP
rs1169747894 1676 dbSNP
rs981756815 1678 dbSNP
rs1327494745 1679 dbSNP
rs1379551021 1680 dbSNP
rs921308477 1681 dbSNP
rs146563723 1685 dbSNP
rs932740076 1687 dbSNP
rs1458640731 1689 dbSNP
rs1237934659 1692 dbSNP
rs1194389614 1701 dbSNP
rs1222049422 1704 dbSNP
rs1266965401 1706 dbSNP
rs1257321668 1707 dbSNP
rs1227399025 1712 dbSNP
rs1233533074 1727 dbSNP
rs1051235649 1737 dbSNP
rs891285983 1741 dbSNP
rs1249670382 1743 dbSNP
rs1055905856 1745 dbSNP
rs1377616590 1747 dbSNP
rs904851814 1749 dbSNP
rs79279451 1753 dbSNP
rs1200678243 1756 dbSNP
rs1404103390 1762 dbSNP
rs1262899371 1765 dbSNP
rs1465793060 1767 dbSNP
rs1427303706 1770 dbSNP
rs1160585702 1777 dbSNP
rs1004409041 1781 dbSNP
rs942082364 1783 dbSNP
rs1380179750 1786 dbSNP
rs1036389216 1787 dbSNP
rs1425860671 1794 dbSNP
rs1037687727 1799 dbSNP
rs886053904 1802 dbSNP
rs897820514 1812 dbSNP
rs557065270 1813 dbSNP
rs1485163388 1819 dbSNP
rs141309481 1821 dbSNP
rs889293667 1824 dbSNP
rs1353805163 1828 dbSNP
rs190742750 1833 dbSNP
rs1236864967 1836 dbSNP
rs1342038587 1848 dbSNP
rs1313215101 1851 dbSNP
rs182092812 1853 dbSNP
rs957141182 1854 dbSNP
rs969758177 1861 dbSNP
rs561442548 1865 dbSNP
rs4940037 1867 dbSNP
rs1474095411 1871 dbSNP
rs761701805 1875 dbSNP
rs981382760 1877 dbSNP
rs928516511 1893 dbSNP
rs185229497 1895 dbSNP
rs1296143377 1897 dbSNP
rs767272084 1903 dbSNP
rs1327114409 1904 dbSNP
rs562023794 1905 dbSNP
rs991347779 1907 dbSNP
rs1214549520 1910 dbSNP
rs1488324301 1910 dbSNP
rs909029893 1913 dbSNP
rs942133315 1914 dbSNP
rs1036442141 1915 dbSNP
rs1272709474 1916 dbSNP
rs919272638 1916 dbSNP
rs1232413993 1928 dbSNP
rs151147707 1930 dbSNP
rs1353332951 1939 dbSNP
rs138909220 1942 dbSNP
rs1339926228 1945 dbSNP
rs1400898287 1945 dbSNP
rs1467321609 1946 dbSNP
rs1289675682 1949 dbSNP
rs1316362328 1950 dbSNP
rs1361929420 1968 dbSNP
rs1392018321 1969 dbSNP
rs968665100 1975 dbSNP
rs1163220818 1976 dbSNP
rs1460150467 1988 dbSNP
rs1223469184 1995 dbSNP
rs1426309054 1998 dbSNP
rs1172369080 2003 dbSNP
rs12327465 2011 dbSNP
rs1477967019 2014 dbSNP
rs1240997337 2017 dbSNP
rs1190341325 2025 dbSNP
rs1260540399 2026 dbSNP
rs1267896190 2028 dbSNP
rs1485071359 2038 dbSNP
rs1207425242 2040 dbSNP
rs979817891 2042 dbSNP
rs1332391873 2049 dbSNP
rs760239719 2051 dbSNP
rs1052042733 2054 dbSNP
rs921287490 2056 dbSNP
rs889338752 2063 dbSNP
rs1007746500 2067 dbSNP
rs1331769804 2069 dbSNP
rs1325812540 2070 dbSNP
rs1262964311 2073 dbSNP
rs932668107 2078 dbSNP
rs1051163922 2082 dbSNP
rs1053918829 2083 dbSNP
rs1171895431 2097 dbSNP
rs912691207 2098 dbSNP
rs766026458 2099 dbSNP
rs1037211183 2100 dbSNP
rs1386534093 2101 dbSNP
rs1478689895 2102 dbSNP
rs1191471586 2117 dbSNP
rs753317438 2121 dbSNP
rs149424787 2123 dbSNP
rs1239748562 2129 dbSNP
rs764514852 2137 dbSNP
rs1437046446 2138 dbSNP
rs751950834 2144 dbSNP
rs569791739 2148 dbSNP
rs1455097170 2156 dbSNP
rs1302821395 2158 dbSNP
rs1289377693 2162 dbSNP
rs905525227 2166 dbSNP
rs1232714970 2167 dbSNP
rs1379702311 2168 dbSNP
rs1332671191 2180 dbSNP
rs1002531060 2183 dbSNP
rs1450333853 2190 dbSNP
rs778792959 2195 dbSNP
rs1415882117 2201 dbSNP
rs1035348290 2216 dbSNP
rs1035391862 2218 dbSNP
rs532503813 2219 dbSNP
rs1010443998 2224 dbSNP
rs1382051301 2225 dbSNP
rs1179185286 2235 dbSNP
rs1021475691 2237 dbSNP
rs1231030128 2246 dbSNP
rs1212475486 2257 dbSNP
rs1247021678 2258 dbSNP
rs1443263727 2260 dbSNP
rs552142907 2264 dbSNP
rs1279911284 2268 dbSNP
rs189547031 2273 dbSNP
rs1315512609 2275 dbSNP
rs909082250 2277 dbSNP
rs1218465013 2278 dbSNP
rs963175839 2282 dbSNP
rs1371619192 2289 dbSNP
rs541243260 2295 dbSNP
rs1449735444 2301 dbSNP
rs1375624379 2304 dbSNP
rs919312080 2315 dbSNP
rs1432252388 2317 dbSNP
rs1028937784 2324 dbSNP
rs1159741608 2325 dbSNP
rs1400085195 2333 dbSNP
rs181201259 2336 dbSNP
rs781371523 2338 dbSNP
rs987907123 2341 dbSNP
rs554931269 2350 dbSNP
rs986834241 2351 dbSNP
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rs886053905 2355 dbSNP
rs143842829 2362 dbSNP
rs557624286 2363 dbSNP
rs1315709627 2367 dbSNP
rs577005548 2374 dbSNP
rs545968890 2384 dbSNP
rs920121213 2396 dbSNP
rs1229206604 2399 dbSNP
rs1053928882 2403 dbSNP
rs1292228922 2412 dbSNP
rs1159634021 2417 dbSNP
rs1376827312 2425 dbSNP
rs1429027306 2427 dbSNP
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rs1288996747 2434 dbSNP
rs746132672 2435 dbSNP
rs1338574287 2436 dbSNP
rs931504205 2445 dbSNP
rs1044636972 2447 dbSNP
rs906156696 2456 dbSNP
rs893979081 2457 dbSNP
rs1461721266 2460 dbSNP
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rs756364354 2465 dbSNP
rs538182527 2469 dbSNP
rs780135239 2470 dbSNP
rs1297676253 2479 dbSNP
rs1185953040 2483 dbSNP
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rs1056726320 2494 dbSNP
rs749343352 2495 dbSNP
rs185349233 2502 dbSNP
rs1010000171 2505 dbSNP
rs1035805110 2507 dbSNP
rs1222246543 2510 dbSNP
rs1021821396 2513 dbSNP
rs904337121 2526 dbSNP
rs1323626718 2528 dbSNP
rs1203282970 2534 dbSNP
rs541823078 2537 dbSNP
rs561803545 2540 dbSNP
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rs1230662121 2544 dbSNP
rs1481437134 2545 dbSNP
rs1012848556 2548 dbSNP
rs1177387985 2549 dbSNP
rs996451603 2549 dbSNP
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rs1016149297 2558 dbSNP
rs963225919 2565 dbSNP
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rs1170012220 2569 dbSNP
rs1267951835 2578 dbSNP
rs972281215 2583 dbSNP
rs1026135899 2588 dbSNP
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rs1028906807 2597 dbSNP
rs1427426659 2615 dbSNP
rs1194800214 2616 dbSNP
rs1178507458 2620 dbSNP
rs954620169 2622 dbSNP
rs1200870110 2624 dbSNP
rs768569083 2631 dbSNP
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rs530741382 2639 dbSNP
rs1305256947 2644 dbSNP
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rs1169892161 2666 dbSNP
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rs557955183 2683 dbSNP
rs78321956 2688 dbSNP
rs778780100 2694 dbSNP
rs769541605 2705 dbSNP
rs886053908 2705 dbSNP
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rs927508627 2763 dbSNP
rs1324956557 2764 dbSNP
rs1282045601 2765 dbSNP
rs1214469535 2767 dbSNP
rs749122500 2770 dbSNP
rs906700739 2770 dbSNP
rs1242298972 2774 dbSNP
rs1270317521 2792 dbSNP
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rs1290503966 2816 dbSNP
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rs1259096069 2861 dbSNP
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rs528447677 2869 dbSNP
rs1277657661 2871 dbSNP
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rs1206789971 2892 dbSNP
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rs995990930 2914 dbSNP
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rs1447084448 2972 dbSNP
rs1292264955 2975 dbSNP
rs139526377 2990 dbSNP
rs1213575251 2993 dbSNP
rs915221913 2999 dbSNP
rs770509560 3002 dbSNP
rs35658729 3019 dbSNP
rs1232881104 3021 dbSNP
rs776146914 3022 dbSNP
rs980214365 3028 dbSNP
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rs1316828368 3045 dbSNP
rs555375214 3049 dbSNP
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rs960225183 3071 dbSNP
rs1325708898 3081 dbSNP
rs1057305419 3083 dbSNP
rs575178510 3087 dbSNP
rs1415126644 3094 dbSNP
rs1169299087 3102 dbSNP
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rs886053910 3110 dbSNP
rs993021368 3112 dbSNP
rs1372069631 3120 dbSNP
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rs1037395977 3134 dbSNP
rs1391923709 3137 dbSNP
rs898823301 3141 dbSNP
rs1400427842 3142 dbSNP
rs1316680509 3143 dbSNP
rs796702216 3144 dbSNP
rs945724210 3145 dbSNP
rs1338819508 3148 dbSNP
rs1047601402 3150 dbSNP
rs1372300437 3158 dbSNP
rs1008700054 3160 dbSNP
rs1017376458 3161 dbSNP
rs1330471655 3162 dbSNP
rs964787254 3164 dbSNP
rs1010942338 3167 dbSNP
rs563178120 3170 dbSNP
rs779727426 3177 dbSNP
rs1455213677 3186 dbSNP
rs886053911 3187 dbSNP
rs1192944734 3190 dbSNP
rs925686911 3195 dbSNP
rs183255810 3204 dbSNP
rs1349692385 3209 dbSNP
rs1221928310 3211 dbSNP
rs186807250 3216 dbSNP
rs1448265113 3217 dbSNP
rs1447557726 3218 dbSNP
rs1202921300 3224 dbSNP
rs1050225328 3225 dbSNP
rs528878031 3227 dbSNP
rs1375947093 3242 dbSNP
rs903703464 3245 dbSNP
rs1280554999 3250 dbSNP
rs1459994134 3253 dbSNP
rs746551930 3262 dbSNP
rs1036280210 3266 dbSNP
rs1185663262 3271 dbSNP
rs966704116 3274 dbSNP
rs897741942 3285 dbSNP
rs886053912 3287 dbSNP
rs191317135 3289 dbSNP
rs994141454 3293 dbSNP
rs978754371 3295 dbSNP
rs1375587293 3316 dbSNP
rs1172935767 3335 dbSNP
rs761125154 3337 dbSNP
rs928217200 3337 dbSNP
rs961173430 3341 dbSNP
rs1410581266 3347 dbSNP
rs1458259560 3349 dbSNP
rs1190404291 3360 dbSNP
rs540445660 3361 dbSNP
rs768203013 3368 dbSNP
rs1486036638 3375 dbSNP
rs559571514 3377 dbSNP
rs1336590923 3385 dbSNP
rs1209323304 3386 dbSNP
rs1319197595 3391 dbSNP
rs182735651 3399 dbSNP
rs762135891 3402 dbSNP
rs767832093 3406 dbSNP
rs1286059903 3407 dbSNP
rs1416317240 3414 dbSNP
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rs1334240501 3429 dbSNP
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rs1311800075 3440 dbSNP
rs1034419167 3443 dbSNP
rs750812933 3444 dbSNP
rs1346853809 3446 dbSNP
rs1439537965 3449 dbSNP
rs1281107883 3451 dbSNP
rs1351075049 3461 dbSNP
rs1399882314 3465 dbSNP
rs1222841339 3466 dbSNP
rs777249272 3470 dbSNP
rs948491938 3471 dbSNP
rs1205718892 3473 dbSNP
rs1417439298 3475 dbSNP
rs866741629 3476 dbSNP
rs1437505149 3487 dbSNP
rs920260577 3494 dbSNP
rs1215779955 3496 dbSNP
rs1179875615 3506 dbSNP
rs886053913 3507 dbSNP
rs1473089079 3513 dbSNP
rs1176341048 3515 dbSNP
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rs992990396 3526 dbSNP
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rs756274309 3533 dbSNP
rs1292330361 3541 dbSNP
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rs1048121322 3544 dbSNP
rs890405260 3546 dbSNP
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rs1395100203 3556 dbSNP
rs1407888175 3557 dbSNP
rs559385300 3559 dbSNP
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rs1038880990 3566 dbSNP
rs1327608255 3566 dbSNP
rs1281131736 3567 dbSNP
rs528143337 3568 dbSNP
rs968037634 3586 dbSNP
rs548283262 3595 dbSNP
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rs1338774749 3618 dbSNP
rs1010955540 3631 dbSNP
rs886053914 3639 dbSNP
rs780147709 3650 dbSNP
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rs1022299516 3656 dbSNP
rs753944813 3658 dbSNP
rs114852346 3663 dbSNP
rs1050155565 3664 dbSNP
rs1272133378 3670 dbSNP
rs1219014184 3678 dbSNP
rs1308714707 3683 dbSNP
rs530933836 3687 dbSNP
rs755068847 3696 dbSNP
rs1362891257 3700 dbSNP
rs1275297822 3706 dbSNP
rs944517333 3710 dbSNP
rs1314255878 3724 dbSNP
rs551257153 3729 dbSNP
rs1463761827 3731 dbSNP
rs1036605510 3733 dbSNP
rs897715511 3742 dbSNP
rs930566802 3746 dbSNP
rs1023815540 3752 dbSNP
rs202070730 3752 dbSNP
rs12961857 3761 dbSNP
rs571174422 3764 dbSNP
rs920328934 3765 dbSNP
rs1001529600 3771 dbSNP
rs929033128 3772 dbSNP
rs748132746 3781 dbSNP
rs1481381972 3783 dbSNP
rs895912471 3798 dbSNP
rs1251560720 3800 dbSNP
rs983159260 3806 dbSNP
rs1014336590 3814 dbSNP
rs1020891007 3815 dbSNP
rs540009734 3822 dbSNP
rs1282360169 3824 dbSNP
rs1235020241 3830 dbSNP
rs866179516 3840 dbSNP
rs979412318 3841 dbSNP
rs886053915 3844 dbSNP
rs953024662 3853 dbSNP
rs985830320 3858 dbSNP
rs944658965 3863 dbSNP
rs373831598 3872 dbSNP
rs575160530 3872 dbSNP
rs886053916 3872 dbSNP
rs1408014929 3877 dbSNP
rs1377422876 3879 dbSNP
rs1174779697 3885 dbSNP
rs547197185 3894 dbSNP
rs1376453064 3910 dbSNP
rs1161679322 3911 dbSNP
rs1387304917 3912 dbSNP
rs944455126 3925 dbSNP
rs1420051758 3935 dbSNP
rs900348177 3936 dbSNP
rs1181080909 3944 dbSNP
rs1481786560 3947 dbSNP
rs1259059689 3964 dbSNP
rs1325933652 3972 dbSNP
rs971891337 3978 dbSNP
rs919068417 3980 dbSNP
rs773522198 3981 dbSNP
rs376846816 3985 dbSNP
rs930524361 3987 dbSNP
rs1317311552 3993 dbSNP
rs1306546321 3994 dbSNP
rs1049444487 4008 dbSNP
rs566427445 4010 dbSNP
rs1225418832 4012 dbSNP
rs1299901948 4013 dbSNP
rs1357422751 4017 dbSNP
rs1313505005 4023 dbSNP
rs1414277776 4028 dbSNP
rs905158756 4032 dbSNP
rs1400606672 4033 dbSNP
rs866589164 4037 dbSNP
rs1343199842 4039 dbSNP
rs1291154249 4047 dbSNP
rs1454614785 4052 dbSNP
rs1221978608 4053 dbSNP
rs1157921402 4054 dbSNP
rs1290078621 4057 dbSNP
rs1471435435 4063 dbSNP
rs772166247 4067 dbSNP
rs1210971487 4074 dbSNP
rs1000001497 4076 dbSNP
rs1253922663 4077 dbSNP
rs1055730755 4078 dbSNP
rs1206888448 4080 dbSNP
rs1194766801 4082 dbSNP
rs886053917 4086 dbSNP
rs1390227452 4087 dbSNP
rs1035068570 4102 dbSNP
rs896472681 4102 dbSNP
rs1226368668 4115 dbSNP
rs777659974 4127 dbSNP
rs1294138353 4129 dbSNP
rs1244078606 4137 dbSNP
rs1023867800 4140 dbSNP
rs1338831651 4149 dbSNP
rs1298364257 4160 dbSNP
rs1383313103 4169 dbSNP
rs1014310175 4177 dbSNP
rs1384677917 4179 dbSNP
rs1443664033 4181 dbSNP
rs1161231572 4183 dbSNP
rs1463376329 4188 dbSNP
rs1386876775 4189 dbSNP
rs746812265 4194 dbSNP
rs1472170874 4206 dbSNP
rs368065509 4215 dbSNP
rs143563979 4219 dbSNP
rs150556996 4222 dbSNP
rs1382772033 4225 dbSNP
rs1383827284 4228 dbSNP
rs1322687098 4229 dbSNP
rs1469659644 4233 dbSNP
rs1365968070 4236 dbSNP
rs1209534905 4247 dbSNP
rs1354296548 4249 dbSNP
rs537464619 4251 dbSNP
rs1272052609 4255 dbSNP
rs1228278710 4257 dbSNP
rs371901376 4263 dbSNP
rs911568102 4265 dbSNP
rs1372254642 4266 dbSNP
rs559471969 4266 dbSNP
rs985766679 4267 dbSNP
rs1018642702 4268 dbSNP
rs965727865 4269 dbSNP
rs1260484745 4274 dbSNP
rs974650965 4278 dbSNP
rs1211081289 4282 dbSNP
rs1462053526 4284 dbSNP
rs921823888 4285 dbSNP
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rs1455415158 4288 dbSNP
rs1253433312 4291 dbSNP
rs1198401428 4297 dbSNP
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rs946622521 4313 dbSNP
rs1460440628 4318 dbSNP
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rs902343673 4330 dbSNP
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rs1158167271 4359 dbSNP
rs1361816190 4367 dbSNP
rs1330489213 4373 dbSNP
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rs540039847 4379 dbSNP
rs1056910634 4380 dbSNP
rs1389481441 4381 dbSNP
rs560338410 4388 dbSNP
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rs1349179752 4477 dbSNP
rs570306736 4480 dbSNP
rs551582129 4481 dbSNP
rs903304734 4485 dbSNP
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rs1280918249 4504 dbSNP
rs1228668855 4507 dbSNP
rs1349310779 4512 dbSNP
rs1315454409 4513 dbSNP
rs1230789637 4514 dbSNP
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rs1269247735 4518 dbSNP
rs1416124872 4523 dbSNP
rs1000730561 4526 dbSNP
rs1333449373 4528 dbSNP
rs1412533603 4529 dbSNP
rs377120415 4536 dbSNP
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rs1483395764 4540 dbSNP
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rs1007798197 4543 dbSNP
rs1025844927 4556 dbSNP
rs1019237620 4558 dbSNP
rs1410071519 4562 dbSNP
rs965695269 4564 dbSNP
rs993217798 4572 dbSNP
rs542263546 4573 dbSNP
rs1237397513 4582 dbSNP
rs1208517318 4584 dbSNP
rs138276731 4584 dbSNP
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rs780198143 4584 dbSNP
rs951838224 4584 dbSNP
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rs1286077509 4587 dbSNP
rs1234530519 4601 dbSNP
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rs759064132 4626 dbSNP
rs1346724634 4637 dbSNP
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rs369040052 4644 dbSNP
rs1428586229 4649 dbSNP
rs1167445275 4656 dbSNP
rs769227954 4670 dbSNP
rs1468148482 4673 dbSNP
rs992023409 4675 dbSNP
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rs1476645102 4679 dbSNP
rs530890237 4684 dbSNP
rs1243234980 4685 dbSNP
rs185468281 4687 dbSNP
rs775015489 4688 dbSNP
rs921586418 4690 dbSNP
rs1265840002 4708 dbSNP
rs1215251098 4713 dbSNP
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rs1288590960 4725 dbSNP
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rs1363904145 4729 dbSNP
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rs924653119 4753 dbSNP
rs112739300 4754 dbSNP
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rs1280162416 4809 dbSNP
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rs887302918 4928 dbSNP
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rs1369008381 4956 dbSNP
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rs768028273 5006 dbSNP
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rs969170647 5332 dbSNP
rs529462368 5335 dbSNP
rs750283122 5337 dbSNP
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rs983212070 5363 dbSNP
rs1205990230 5371 dbSNP
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rs1273113785 5375 dbSNP
rs1221238449 5378 dbSNP
rs1346225042 5382 dbSNP
rs180715759 5389 dbSNP
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rs1043192046 5432 dbSNP
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rs1391037252 5518 dbSNP
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rs68159021 5547 dbSNP
rs11662245 5548 dbSNP
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rs1189822217 5549 dbSNP
rs777856072 5550 dbSNP
rs1357951916 5551 dbSNP
rs74169183 5551 dbSNP
rs202140561 5552 dbSNP
rs1229609192 5553 dbSNP
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rs1180470543 5555 dbSNP
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rs1294022586 5561 dbSNP
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rs1383345285 5564 dbSNP
rs1175141053 5566 dbSNP
rs1399380228 5568 dbSNP
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rs1415839490 5571 dbSNP
rs1334332705 5573 dbSNP
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rs1334953004 5575 dbSNP
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rs554002554 5598 dbSNP
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rs1360028934 5861 dbSNP
rs767658962 5861 dbSNP
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rs200482328 5864 dbSNP
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rs1430063050 5889 dbSNP
rs1046146220 5903 dbSNP
rs370152218 5914 dbSNP
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rs529594222 5947 dbSNP
rs1223172662 5948 dbSNP
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rs1290969012 5955 dbSNP
rs1219964716 5968 dbSNP
rs1433184011 5971 dbSNP
rs886053934 5986 dbSNP
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rs3819122 5995 dbSNP
rs181250637 6010 dbSNP
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rs1006794099 6017 dbSNP
rs1359124398 6020 dbSNP
rs1355529110 6027 dbSNP
rs1170220093 6029 dbSNP
rs1408972175 6031 dbSNP
rs1210916096 6040 dbSNP
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rs1463111319 6044 dbSNP
rs551023050 6045 dbSNP
rs1248320219 6046 dbSNP
rs997963042 6050 dbSNP
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rs12960005 6065 dbSNP
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rs561194988 6071 dbSNP
rs1230459661 6087 dbSNP
rs909401693 6115 dbSNP
rs926282182 6127 dbSNP
rs963544952 6131 dbSNP
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rs1374738411 6142 dbSNP
rs1297898889 6143 dbSNP
rs187018810 6151 dbSNP
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rs1178233688 6160 dbSNP
rs1388000166 6165 dbSNP
rs1469843536 6174 dbSNP
rs939928237 6177 dbSNP
rs35671610 6180 dbSNP
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rs1322626363 6205 dbSNP
rs191403347 6209 dbSNP
rs1479574307 6217 dbSNP
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rs949018801 6222 dbSNP
rs1366258838 6223 dbSNP
rs1395636216 6228 dbSNP
rs1261295517 6240 dbSNP
rs1046496159 6250 dbSNP
rs1230309613 6258 dbSNP
rs998226800 6258 dbSNP
rs923686792 6260 dbSNP
rs1028341247 6264 dbSNP
rs772566289 6265 dbSNP
rs1381852881 6283 dbSNP
rs1337823476 6294 dbSNP
rs768723885 6297 dbSNP
rs935094590 6300 dbSNP
rs1342578228 6309 dbSNP
rs1334048714 6316 dbSNP
rs1454945738 6317 dbSNP
rs1364305976 6328 dbSNP
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rs1327685669 6340 dbSNP
rs1184006690 6348 dbSNP
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rs573785159 6351 dbSNP
rs886053937 6351 dbSNP
rs893630316 6361 dbSNP
rs989460339 6362 dbSNP
rs1260622422 6376 dbSNP
rs1024487250 6380 dbSNP
rs1179704069 6381 dbSNP
rs971518876 6394 dbSNP
rs981878560 6395 dbSNP
rs1006762840 6396 dbSNP
rs1180811156 6400 dbSNP
rs547102720 6401 dbSNP
rs557992238 6409 dbSNP
rs76830638 6410 dbSNP
rs983841063 6420 dbSNP
rs2282544 6424 dbSNP
rs549995868 6427 dbSNP
rs1163920254 6431 dbSNP
rs1443843869 6438 dbSNP
rs1465749394 6439 dbSNP
rs1195658870 6445 dbSNP
rs1429180027 6451 dbSNP
rs1261075560 6460 dbSNP
rs1037314920 6475 dbSNP
rs1293212619 6477 dbSNP
rs997491250 6482 dbSNP
rs1030760080 6486 dbSNP
rs1222206962 6490 dbSNP
rs569819237 6493 dbSNP
rs1005356406 6502 dbSNP
rs1263291059 6503 dbSNP
rs1016338530 6507 dbSNP
rs1397036549 6508 dbSNP
rs76020793 6514 dbSNP
rs558196623 6515 dbSNP
rs183472455 6523 dbSNP
rs1380043917 6531 dbSNP
rs889890805 6532 dbSNP
rs1303760697 6537 dbSNP
rs971400899 6538 dbSNP
rs981777732 6558 dbSNP
rs777081844 6562 dbSNP
rs1288456629 6565 dbSNP
rs1311046940 6568 dbSNP
rs1169454046 6574 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 4089.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 4089.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine "PAR-CLIP data was present in GSM1065669. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM4903833
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_a
Location of target site NM_005359 | 3UTR | UAUUUUUAAAGUUUAUUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_005359 | 3UTR | UUUUAAAGUUUAUUGC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer