miRTarBase - #MIRT080711


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pre-miRNA Information
pre-miRNA hsa-mir-548ah   
Genomic Coordinates chr4: 76575551 - 76575626
Description Homo sapiens miR-548ah stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548ah-5p
Sequence 11| AAAAGUGAUUGCAGUGUUUG |30
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 4 + 76575563 29233923 MiREDiBase
A-to-I 4 4 + 76575564 29233923 MiREDiBase
A-to-I 13 4 + 76575573 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1249440036 5 dbSNP
rs1208814230 6 dbSNP
rs1327858995 9 dbSNP
rs1034733368 12 dbSNP
rs1334062111 15 dbSNP
rs1442043011 16 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZCCHC2   
Synonyms C18orf49
Description zinc finger CCHC-type containing 2
Transcript NM_017742   
Expression
Putative miRNA Targets on ZCCHC2
3'UTR of ZCCHC2
(miRNA target sites are highlighted)		 
>ZCCHC2|NM_017742|3'UTR
   1 AACGAGTAAAGCTTGCCTACTTAATACACTCAAGTGTGGGGAGTCATGGGGTGTGGAGGGGAGGAAAGGAAAGGTATTTT
  81 GTTTCTTTGTCTATACATTTCCTAGATTTCTATGCAGTTGGGATTTTTCATTTCTCTTGTACCAATGTCCAAAACAAGAA
 161 AGAATGCAATGCTTTTGAGCCTCTGGTCTCCTGGTTCAACAACAGGCTTATATGTATGATACATGTAATTTAAACCTTCA
 241 GACAAACTTAAATGTTGGTGCGTGCTTTTTTTTTTTTTTTTACACTGAATACTTGCTGTGTGCAATGTTTACTGAATCTT
 321 TAAAACTGTGTATTTGACCTTTTTTTTACAACACTGGTGACAGTCATATGGTTTTGAAAAAAAAAAGAAATTTTGCTTCT
 401 TCCCAGCTTTTCTCACTTTCACCCTAAACGACACTTCCTCCCCAGCCAGCCTCACTCTGTCTCCGGCCCGCAGCAGGAGC
 481 AGCCAGCAGTGCATTCACCCCACTTTTGTAAACTGCTCTGCATATAAACCAAGGGCAGAATGTTTCACCCTGATCTTATG
 561 GGAGGAATCAAACTCCCAAAATAGTGTGTATATATGTAATAAACAGCGTCACGTAAATACATATATGCAGTGCTTGTTGT
 641 CCAAATAGAAATGAAAATAAGTGGAAGAGAGAGGAAGAAGTCAAACCATATGAAACTGAAAAAATATGACGTACGAAATG
 721 GACAAAAAGCTTTTTCTGAAACCAACTTTTTACTTCCATCATCCTTTTTTAGCCTGTTGCTTCAGAGAGACACAAAGTGA
 801 ACACACTGGTGTGAATGTCGCTCTCTGTGTGCTTGTGTTTGTAATGAAAGTCTACAGCCAATTTTACTTGTCTACCACCG
 881 TGTTGTGCTCAAAGAGACACTACTTGAGTGAAGATTTCTTCTTTCCCTGTACCAGCTGTTACAGTGTTACGTTGTGTTTA
 961 AAATGTGTATGGTTTATTGCAATCTGAACAGAGCTATGGGTTTCTACCATAAGTCAGGTTGTTTGTTCCCTAACCTGTCT
1041 CTCATAGCAAAGTCACTTTTATAACAGTTTACCACTATGCTTGATTATAATGTGAAAGGCGGAATTCTGAGTGTGTTAAG
1121 ATGGTATTAATCATGTCGGTGTCATGTCACTAAGTTTAATGCTGCTGTTTTTAAAAAAAAAAAAAAGTTTTTTTAAAAAG
1201 CCAATCTATGTACTAAATTGCTTCCAGGTAATTTTTGATTTCCTAAAGTGCACTGAGGTTATCTGGAAGATTGGGTGTAT
1281 TTTTTGGTGACTGCTGCATTCATCAGCAATGAACAGTTTCCACTGTATAGTCCTAGGGGTCAGGGGGTGGGGGTTTCATT
1361 TTCCATTCCTCAGCACAGAGCAGAAATGATAGATTTTTATTGTTTGGAGTAACGTTGGTATGCAGCAGAGGAACGTAAAC
1441 ATTTGGTCTTGGTTCAGAAGCCTAACAGATTGCTAGACAAGAGAAAAAACTTGAAGAAAAAAGAAGCTTAATTTCATGCT
1521 TCATAAGTAGCATTTATATTTATAGCACCAATGTACATTTTGAAACTTTCTTTCAGGGGTGGGAGTTATGGGGAAGGGGT
1601 GGGTGTGAAGGGGTAGATGAAAGCTTTAATTTAGAAAGAAAGTTCAAGTAAAGGAAATTATTTTGATTAAATATATTTTA
1681 TTTGATCTGGGTATTTTTGGACCACATTATTAAATTAATTGTTAAGCTGCAGTTGAGTTGTTCAAGTGAGAGTTTTGATA
1761 AGCCACTTATGGGCCGCGTTGTGAATCACTTGCCAGTTGTACTTTATGGAGCTTATTTTATGATTTAAAATACTGTACTG
1841 TACATAGGAGGTATGTTACCTTCTCCTTATTTGTATGTTTACCATATACTTTGATATTTGAAATGTTATGTACTGGAAAG
1921 GCCACTTATATTTCTAGAACAGATTGGATTTTATGCAACCTTTTTTCCTTGAATTAACAGCAATAAAAAAATGAAAAACA
2001 GCTTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' guuuGUGACGUU--AGUGAAAa 5'
              ||: ||||  ||||||| 
Target 5' ctctCATAGCAAAGTCACTTTt 3'
 1039 - 1060 158.00 -11.00
2 
miRNA  3' guUUGUGACGUUAGUGAAAa 5'
            |:| :| |  ||||||| 
Target 5' ccAGCTTTTC--TCACTTTc 3'
 403 - 420 146.00 -5.90
3 
miRNA  3' guuUGUGACG-UUAGUGAAaa 5'
             :|::||: ||||||||  
Target 5' gccGCGTTGTGAATCACTTgc 3'
 1773 - 1793 141.00 -12.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM2881556 3 COSMIC
COSN30163982 4 COSMIC
COSN30466191 21 COSMIC
COSN30530885 38 COSMIC
COSN31498973 39 COSMIC
COSN30187007 52 COSMIC
COSN9340292 64 COSMIC
COSN31786324 65 COSMIC
COSN30167644 69 COSMIC
COSN31583212 135 COSMIC
COSN31526106 143 COSMIC
COSN20115111 282 COSMIC
COSN31557634 454 COSMIC
COSN31590257 490 COSMIC
COSN26570963 563 COSMIC
COSN5430622 777 COSMIC
COSN6130262 813 COSMIC
COSN25725978 1000 COSMIC
COSN28706772 1044 COSMIC
COSN30165544 1142 COSMIC
COSN26567545 1175 COSMIC
COSN26571323 1176 COSMIC
COSN20115119 1186 COSMIC
COSN20115115 1187 COSMIC
COSN20115116 1187 COSMIC
COSN14813838 1188 COSMIC
COSN14820128 1189 COSMIC
COSN31534751 1225 COSMIC
COSN1208145 1307 COSMIC
COSN31607148 1358 COSMIC
COSN31481808 1414 COSMIC
COSN28650182 1436 COSMIC
COSN6130263 1727 COSMIC
COSN31481379 1778 COSMIC
COSN25917832 1885 COSMIC
COSN31583342 1888 COSMIC
COSN26640601 1982 COSMIC
rs11557713 65 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs750213191 4 dbSNP
rs760718338 5 dbSNP
rs1366260873 6 dbSNP
rs1244637207 7 dbSNP
rs369947304 22 dbSNP
rs1032134185 23 dbSNP
rs777076620 28 dbSNP
rs760078050 29 dbSNP
rs373565255 32 dbSNP
rs758784087 33 dbSNP
rs879093900 35 dbSNP
rs1423151650 36 dbSNP
rs1310597693 37 dbSNP
rs750643689 38 dbSNP
rs1337614943 40 dbSNP
rs1408505268 46 dbSNP
rs763886075 47 dbSNP
rs1173898710 48 dbSNP
rs1451373994 62 dbSNP
rs11557713 65 dbSNP
rs1480083332 73 dbSNP
rs1255287767 74 dbSNP
rs1175752766 81 dbSNP
rs1430043185 94 dbSNP
rs542255816 106 dbSNP
rs916115446 113 dbSNP
rs1157934973 119 dbSNP
rs948888160 121 dbSNP
rs1267940360 131 dbSNP
rs1416294064 135 dbSNP
rs1352890005 139 dbSNP
rs954503829 148 dbSNP
rs144366059 166 dbSNP
rs1340485165 167 dbSNP
rs1335604187 170 dbSNP
rs910245830 172 dbSNP
rs927722493 175 dbSNP
rs78317986 176 dbSNP
rs1046688996 180 dbSNP
rs765887921 186 dbSNP
rs1300452556 195 dbSNP
rs372308391 200 dbSNP
rs1415592531 212 dbSNP
rs547114095 213 dbSNP
rs1038290304 217 dbSNP
rs1473080510 223 dbSNP
rs899689894 224 dbSNP
rs75819440 227 dbSNP
rs1284537882 241 dbSNP
rs1030171342 242 dbSNP
rs1445545128 243 dbSNP
rs1247593708 245 dbSNP
rs1209784303 246 dbSNP
rs955459149 247 dbSNP
rs1271839061 248 dbSNP
rs1228311475 250 dbSNP
rs930101412 254 dbSNP
rs1047246530 257 dbSNP
rs1428008917 259 dbSNP
rs1364034459 261 dbSNP
rs1283036145 262 dbSNP
rs1165095703 266 dbSNP
rs1437029853 266 dbSNP
rs1474445697 266 dbSNP
rs1491193093 266 dbSNP
rs34072948 266 dbSNP
rs35651410 266 dbSNP
rs568874001 266 dbSNP
rs796434745 266 dbSNP
rs878965572 266 dbSNP
rs1317157825 269 dbSNP
rs1389790695 272 dbSNP
rs79319245 280 dbSNP
rs80056495 281 dbSNP
rs1189388168 282 dbSNP
rs1466413024 282 dbSNP
rs1218458620 283 dbSNP
rs538996616 284 dbSNP
rs1490136979 285 dbSNP
rs1200036224 288 dbSNP
rs1221253725 300 dbSNP
rs1271040893 306 dbSNP
rs1452738947 313 dbSNP
rs1479048249 314 dbSNP
rs1292585295 320 dbSNP
rs558090540 322 dbSNP
rs1212321642 331 dbSNP
rs1156906189 333 dbSNP
rs137906803 340 dbSNP
rs1407462270 340 dbSNP
rs1297680997 341 dbSNP
rs1401532738 345 dbSNP
rs1368300904 355 dbSNP
rs571413654 362 dbSNP
rs1436872599 367 dbSNP
rs949527796 368 dbSNP
rs553073826 370 dbSNP
rs1424490188 372 dbSNP
rs1370090936 377 dbSNP
rs1451603461 377 dbSNP
rs796604053 377 dbSNP
rs751227016 378 dbSNP
rs1191001213 382 dbSNP
rs905242122 383 dbSNP
rs557560087 390 dbSNP
rs1000825537 398 dbSNP
rs1203110192 417 dbSNP
rs1439324487 425 dbSNP
rs537334653 429 dbSNP
rs892395467 430 dbSNP
rs1009331350 431 dbSNP
rs754407646 433 dbSNP
rs999266786 441 dbSNP
rs780778858 443 dbSNP
rs1030188019 446 dbSNP
rs747710837 449 dbSNP
rs556902752 451 dbSNP
rs1277541611 460 dbSNP
rs573774396 461 dbSNP
rs921617202 464 dbSNP
rs542352987 465 dbSNP
rs990403256 466 dbSNP
rs1431646824 470 dbSNP
rs371723957 471 dbSNP
rs1291860811 476 dbSNP
rs962998054 478 dbSNP
rs1436027923 480 dbSNP
rs1175820841 497 dbSNP
rs552609927 500 dbSNP
rs973071245 502 dbSNP
rs1253104248 503 dbSNP
rs920153222 510 dbSNP
rs1484367324 511 dbSNP
rs970659823 517 dbSNP
rs779634313 519 dbSNP
rs375978339 523 dbSNP
rs544575965 526 dbSNP
rs1227530374 536 dbSNP
rs949498334 550 dbSNP
rs1290090258 556 dbSNP
rs1411744245 560 dbSNP
rs1376989227 563 dbSNP
rs746225647 570 dbSNP
rs1449086956 572 dbSNP
rs34455131 575 dbSNP
rs1361093836 579 dbSNP
rs1157435939 584 dbSNP
rs1457009849 587 dbSNP
rs1383686975 607 dbSNP
rs1444320239 608 dbSNP
rs939080758 609 dbSNP
rs1047243948 613 dbSNP
rs1254954647 614 dbSNP
rs1181903340 622 dbSNP
rs1311288170 634 dbSNP
rs772502185 637 dbSNP
rs1053732084 639 dbSNP
rs879632966 647 dbSNP
rs908246539 653 dbSNP
rs1231451531 654 dbSNP
rs775511539 659 dbSNP
rs1448430067 662 dbSNP
rs1312462565 665 dbSNP
rs1312164704 666 dbSNP
rs1381596944 666 dbSNP
rs1038322471 671 dbSNP
rs1381659286 671 dbSNP
rs747275001 674 dbSNP
rs768806771 686 dbSNP
rs932493708 691 dbSNP
rs1050911571 692 dbSNP
rs1007806004 706 dbSNP
rs565253765 707 dbSNP
rs1273698584 711 dbSNP
rs891214491 712 dbSNP
rs531144907 715 dbSNP
rs1465056320 716 dbSNP
rs998984772 717 dbSNP
rs1200607544 722 dbSNP
rs1031716023 726 dbSNP
rs1241456558 729 dbSNP
rs1265922921 733 dbSNP
rs1222407675 743 dbSNP
rs893162965 744 dbSNP
rs1444261894 746 dbSNP
rs963143778 751 dbSNP
rs1188632989 757 dbSNP
rs182506646 757 dbSNP
rs376752295 758 dbSNP
rs1011521078 759 dbSNP
rs1366161096 762 dbSNP
rs561372059 762 dbSNP
rs994488729 765 dbSNP
rs572827589 777 dbSNP
rs1026017305 781 dbSNP
rs1294559038 796 dbSNP
rs1474660580 801 dbSNP
rs1167833074 807 dbSNP
rs1368227482 808 dbSNP
rs770790586 810 dbSNP
rs776656673 811 dbSNP
rs1449753181 813 dbSNP
rs1391583491 816 dbSNP
rs761943584 820 dbSNP
rs530308885 821 dbSNP
rs1267990884 824 dbSNP
rs1334142634 826 dbSNP
rs951603607 826 dbSNP
rs982025005 837 dbSNP
rs1204495776 838 dbSNP
rs1404846439 844 dbSNP
rs1035896134 862 dbSNP
rs950945133 875 dbSNP
rs141409647 876 dbSNP
rs908277650 880 dbSNP
rs941016804 881 dbSNP
rs1302394944 883 dbSNP
rs1226508082 886 dbSNP
rs1392307889 888 dbSNP
rs973708755 890 dbSNP
rs981361937 893 dbSNP
rs1319929505 895 dbSNP
rs773147403 897 dbSNP
rs1372032441 898 dbSNP
rs1170386129 904 dbSNP
rs1261374685 913 dbSNP
rs926685031 915 dbSNP
rs1200698783 918 dbSNP
rs1201227798 919 dbSNP
rs1250922163 927 dbSNP
rs1258604379 928 dbSNP
rs1483384738 930 dbSNP
rs369928845 937 dbSNP
rs550085952 937 dbSNP
rs1199003511 940 dbSNP
rs566927748 945 dbSNP
rs3833190 949 dbSNP
rs397840822 949 dbSNP
rs1257007528 951 dbSNP
rs1264461006 952 dbSNP
rs921180883 953 dbSNP
rs1327744785 955 dbSNP
rs564356278 967 dbSNP
rs1288204590 976 dbSNP
rs1409917507 983 dbSNP
rs533309298 989 dbSNP
rs932553873 993 dbSNP
rs1479103792 994 dbSNP
rs866031838 996 dbSNP
rs145285230 997 dbSNP
rs890375428 1007 dbSNP
rs1411151866 1009 dbSNP
rs569210452 1010 dbSNP
rs891002287 1016 dbSNP
rs150940655 1018 dbSNP
rs934472451 1021 dbSNP
rs557211101 1023 dbSNP
rs1173962794 1029 dbSNP
rs1382329418 1033 dbSNP
rs762585943 1042 dbSNP
rs77119162 1044 dbSNP
rs8088581 1045 dbSNP
rs1022887598 1049 dbSNP
rs1342252284 1056 dbSNP
rs905850756 1057 dbSNP
rs1243369563 1063 dbSNP
rs1025985166 1064 dbSNP
rs1402993860 1068 dbSNP
rs1432644844 1071 dbSNP
rs1387705456 1074 dbSNP
rs759205751 1075 dbSNP
rs1282618886 1076 dbSNP
rs1458790093 1080 dbSNP
rs188108806 1088 dbSNP
rs1322904138 1092 dbSNP
rs767319103 1093 dbSNP
rs529326948 1096 dbSNP
rs1369284351 1101 dbSNP
rs549091720 1102 dbSNP
rs1025197171 1108 dbSNP
rs1247843946 1114 dbSNP
rs971405860 1119 dbSNP
rs1348832682 1127 dbSNP
rs980944099 1135 dbSNP
rs1204872599 1138 dbSNP
rs983588888 1139 dbSNP
rs1015368616 1140 dbSNP
rs140698309 1158 dbSNP
rs1363969885 1159 dbSNP
rs989561606 1160 dbSNP
rs766850776 1161 dbSNP
rs1268882583 1166 dbSNP
rs1322748716 1168 dbSNP
rs1433192536 1168 dbSNP
rs913987898 1168 dbSNP
rs1200388276 1172 dbSNP
rs1491462581 1172 dbSNP
rs11320033 1173 dbSNP
rs1198843211 1173 dbSNP
rs1293367840 1173 dbSNP
rs1452687488 1173 dbSNP
rs1491094279 1173 dbSNP
rs200828686 1173 dbSNP
rs371519156 1173 dbSNP
rs558135414 1173 dbSNP
rs558955871 1173 dbSNP
rs571720209 1173 dbSNP
rs71338281 1173 dbSNP
rs77361509 1173 dbSNP
rs869273686 1173 dbSNP
rs973744704 1173 dbSNP
rs201345990 1174 dbSNP
rs199852036 1175 dbSNP
rs945361815 1176 dbSNP
rs1216124335 1186 dbSNP
rs200046565 1186 dbSNP
rs1491544568 1187 dbSNP
rs377481611 1187 dbSNP
rs767632242 1187 dbSNP
rs370032876 1188 dbSNP
rs1052210611 1189 dbSNP
rs1437162205 1191 dbSNP
rs373009274 1195 dbSNP
rs558298078 1196 dbSNP
rs1347302144 1201 dbSNP
rs911797086 1205 dbSNP
rs1422579606 1209 dbSNP
rs575175435 1217 dbSNP
rs943311153 1222 dbSNP
rs1411849773 1223 dbSNP
rs1346077533 1226 dbSNP
rs1038881575 1232 dbSNP
rs1387369284 1244 dbSNP
rs932308470 1256 dbSNP
rs1334170092 1262 dbSNP
rs544623340 1270 dbSNP
rs1482410331 1272 dbSNP
rs1251895210 1273 dbSNP
rs755746288 1274 dbSNP
rs1310048097 1275 dbSNP
rs779507502 1276 dbSNP
rs192913617 1277 dbSNP
rs1325626956 1280 dbSNP
rs566195010 1280 dbSNP
rs765543816 1282 dbSNP
rs1013898846 1285 dbSNP
rs1298811173 1286 dbSNP
rs1444685939 1326 dbSNP
rs1024414384 1328 dbSNP
rs914662525 1330 dbSNP
rs1333945252 1331 dbSNP
rs906770401 1339 dbSNP
rs1157664070 1342 dbSNP
rs1489105937 1342 dbSNP
rs947507920 1344 dbSNP
rs1178413866 1345 dbSNP
rs1482085418 1346 dbSNP
rs150127022 1349 dbSNP
rs1210562176 1350 dbSNP
rs905885681 1353 dbSNP
rs2849623 1357 dbSNP
rs989612522 1366 dbSNP
rs1003272123 1375 dbSNP
rs1021007719 1394 dbSNP
rs185173939 1394 dbSNP
rs1381856255 1399 dbSNP
rs1057386945 1401 dbSNP
rs886665697 1403 dbSNP
rs987479264 1405 dbSNP
rs540791943 1414 dbSNP
rs1005054853 1415 dbSNP
rs1016405143 1416 dbSNP
rs963533354 1421 dbSNP
rs1196052063 1428 dbSNP
rs1350352558 1430 dbSNP
rs750973334 1435 dbSNP
rs3744927 1436 dbSNP
rs1457226680 1445 dbSNP
rs1346261026 1447 dbSNP
rs953767858 1454 dbSNP
rs1160701024 1461 dbSNP
rs551867648 1463 dbSNP
rs1421477825 1470 dbSNP
rs1412634914 1474 dbSNP
rs974620902 1479 dbSNP
rs1446216078 1480 dbSNP
rs920519910 1482 dbSNP
rs1207853935 1485 dbSNP
rs780441697 1487 dbSNP
rs1465308294 1490 dbSNP
rs1262376747 1492 dbSNP
rs1379408609 1494 dbSNP
rs1244176499 1496 dbSNP
rs1314829801 1497 dbSNP
rs1320060202 1509 dbSNP
rs571477134 1516 dbSNP
rs1047615446 1517 dbSNP
rs955918564 1519 dbSNP
rs886172583 1521 dbSNP
rs532690736 1522 dbSNP
rs1224399535 1524 dbSNP
rs988681361 1531 dbSNP
rs914445552 1533 dbSNP
rs1291082816 1542 dbSNP
rs1045393518 1544 dbSNP
rs1198734633 1552 dbSNP
rs947203418 1553 dbSNP
rs1163629775 1558 dbSNP
rs905564975 1566 dbSNP
rs369839559 1567 dbSNP
rs1044514403 1579 dbSNP
rs1459722692 1580 dbSNP
rs1428825232 1582 dbSNP
rs1001157098 1587 dbSNP
rs1182712434 1588 dbSNP
rs1488099489 1590 dbSNP
rs927339258 1590 dbSNP
rs537197662 1596 dbSNP
rs938712817 1615 dbSNP
rs1361908793 1616 dbSNP
rs894073194 1617 dbSNP
rs1228147759 1619 dbSNP
rs552697027 1625 dbSNP
rs1298177084 1627 dbSNP
rs768914684 1632 dbSNP
rs1385628392 1633 dbSNP
rs34535904 1635 dbSNP
rs1168223024 1642 dbSNP
rs1303253930 1644 dbSNP
rs1021571278 1645 dbSNP
rs966813476 1661 dbSNP
rs886696531 1671 dbSNP
rs1462176997 1672 dbSNP
rs1005174408 1681 dbSNP
rs1019034847 1688 dbSNP
rs1432548428 1699 dbSNP
rs1269469089 1701 dbSNP
rs1200240611 1702 dbSNP
rs964674196 1707 dbSNP
rs974754960 1710 dbSNP
rs1402675838 1719 dbSNP
rs1037957523 1722 dbSNP
rs1340275666 1731 dbSNP
rs1253496324 1742 dbSNP
rs1312154406 1745 dbSNP
rs1302508643 1751 dbSNP
rs1380274320 1764 dbSNP
rs562789966 1765 dbSNP
rs1348159719 1766 dbSNP
rs755217079 1770 dbSNP
rs1395689393 1771 dbSNP
rs996333996 1773 dbSNP
rs1028086694 1776 dbSNP
rs531685439 1777 dbSNP
rs112771180 1779 dbSNP
rs1465305500 1790 dbSNP
rs781451153 1797 dbSNP
rs1307479366 1800 dbSNP
rs953906022 1806 dbSNP
rs1218682133 1809 dbSNP
rs1007896685 1810 dbSNP
rs1259472138 1813 dbSNP
rs951967815 1816 dbSNP
rs550610777 1821 dbSNP
rs145764263 1835 dbSNP
rs1199097927 1840 dbSNP
rs955703601 1852 dbSNP
rs949827502 1856 dbSNP
rs1237704514 1862 dbSNP
rs988712521 1866 dbSNP
rs1484111490 1868 dbSNP
rs1045852402 1872 dbSNP
rs536063202 1876 dbSNP
rs1184624548 1878 dbSNP
rs546416941 1882 dbSNP
rs535651913 1884 dbSNP
rs927069383 1887 dbSNP
rs1260934563 1906 dbSNP
rs748168341 1910 dbSNP
rs1337173146 1916 dbSNP
rs566313399 1917 dbSNP
rs914476485 1921 dbSNP
rs538385974 1922 dbSNP
rs28373970 1926 dbSNP
rs1406625515 1930 dbSNP
rs1338417635 1941 dbSNP
rs879413374 1945 dbSNP
rs980317740 1947 dbSNP
rs1468311197 1969 dbSNP
rs927401853 1979 dbSNP
rs1387749884 1985 dbSNP
rs1158100623 1990 dbSNP
rs1470515079 1994 dbSNP
rs1365772048 1997 dbSNP
rs35260291 1999 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 54877.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' guuugugacguuAGUGAAAa 5'
                      ||||||| 
Target 5' ------------UCACUUUu 3'
 		1 - 8
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000269499.5 | 3UTR | UCACUUUUAUAACAGUUUACCACUAUGCUUGAUUAUAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
302 hsa-miR-548ah-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057035 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT060559 CCND1 cyclin D1 2 12
MIRT061211 MED17 mediator complex subunit 17 2 2
MIRT061700 BTG2 BTG anti-proliferation factor 2 2 4
MIRT064457 GPR137B G protein-coupled receptor 137B 2 2
MIRT065680 ACVR1B activin A receptor type 1B 2 6
MIRT068902 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT069414 ZFYVE21 zinc finger FYVE-type containing 21 2 8
MIRT069711 FOXJ3 forkhead box J3 2 2
MIRT071220 FCF1 FCF1, rRNA-processing protein 2 2
MIRT072258 B2M beta-2-microglobulin 2 10
MIRT073631 IGF1R insulin like growth factor 1 receptor 2 4
MIRT077074 KRT10 keratin 10 2 8
MIRT080711 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT081230 MIDN midnolin 2 8
MIRT085792 FMNL2 formin like 2 2 2
MIRT088055 UBXN2A UBX domain protein 2A 2 4
MIRT089219 ACTR2 ARP2 actin related protein 2 homolog 2 6
MIRT090626 PLS1 plastin 1 2 2
MIRT091390 EIF4A2 eukaryotic translation initiation factor 4A2 2 2
MIRT092424 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 2 2
MIRT094197 THAP6 THAP domain containing 6 2 2
MIRT098283 SMIM13 small integral membrane protein 13 2 6
MIRT099150 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT103209 SP4 Sp4 transcription factor 2 6
MIRT108713 XIAP X-linked inhibitor of apoptosis 2 2
MIRT114051 AKAP11 A-kinase anchoring protein 11 2 12
MIRT135494 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT156020 SIK1 salt inducible kinase 1 2 2
MIRT173035 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT182263 POU2F1 POU class 2 homeobox 1 2 2
MIRT182529 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT184889 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT187295 CLIC4 chloride intracellular channel 4 2 4
MIRT187488 PCBP2 poly(rC) binding protein 2 2 4
MIRT188194 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT188215 RAP1B RAP1B, member of RAS oncogene family 2 2
MIRT192288 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT201087 ZNF805 zinc finger protein 805 2 2
MIRT212617 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 8
MIRT213196 REST RE1 silencing transcription factor 2 2
MIRT213334 KIAA0232 KIAA0232 2 2
MIRT213444 DCK deoxycytidine kinase 2 4
MIRT220129 CAV1 caveolin 1 2 2
MIRT230191 AKAP17A A-kinase anchoring protein 17A 2 2
MIRT242730 ZNF714 zinc finger protein 714 2 2
MIRT242759 FNBP1L formin binding protein 1 like 2 2
MIRT257297 FOXC1 forkhead box C1 2 2
MIRT258911 LAPTM4B lysosomal protein transmembrane 4 beta 2 4
MIRT260958 SCD stearoyl-CoA desaturase 2 2
MIRT263458 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT284918 NFAT5 nuclear factor of activated T-cells 5 2 6
MIRT291947 TPM4 tropomyosin 4 2 2
MIRT297340 BCL2L11 BCL2 like 11 2 8
MIRT308819 NPNT nephronectin 2 2
MIRT311518 ISOC1 isochorismatase domain containing 1 2 2
MIRT314181 OCLN occludin 2 4
MIRT315706 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 2
MIRT331762 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT338783 STMN1 stathmin 1 2 2
MIRT341459 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT344226 SRSF11 serine and arginine rich splicing factor 11 2 2
MIRT355851 SGMS2 sphingomyelin synthase 2 2 4
MIRT409854 RLIM ring finger protein, LIM domain interacting 2 2
MIRT442758 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT443716 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT444315 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT444387 ZNF623 zinc finger protein 623 2 2
MIRT445543 TBC1D8 TBC1 domain family member 8 2 2
MIRT447791 NUPL2 nucleoporin like 2 2 2
MIRT447963 WDR77 WD repeat domain 77 2 2
MIRT448311 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT448363 TSR1 TSR1, ribosome maturation factor 2 6
MIRT448389 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT448801 GLIS3 GLIS family zinc finger 3 2 2
MIRT450193 TMEM9B TMEM9 domain family member B 2 2
MIRT453365 ZNF3 zinc finger protein 3 2 2
MIRT453579 CRCP CGRP receptor component 2 2
MIRT454815 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 2 2
MIRT455376 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT456971 SPAM1 sperm adhesion molecule 1 2 2
MIRT458297 FUT10 fucosyltransferase 10 2 2
MIRT458872 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT460528 S100A11 S100 calcium binding protein A11 2 4
MIRT462130 AKR7A2 aldo-keto reductase family 7 member A2 2 4
MIRT463268 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT463618 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT465229 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT465831 TMEM64 transmembrane protein 64 2 2
MIRT466460 TFAM transcription factor A, mitochondrial 2 8
MIRT467891 SLC22A23 solute carrier family 22 member 23 2 2
MIRT468847 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT469854 PXK PX domain containing serine/threonine kinase like 2 8
MIRT469885 PURB purine rich element binding protein B 2 4
MIRT470448 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 8
MIRT471867 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT472053 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT472163 NIN ninein 2 4
MIRT474279 LARP1 La ribonucleoprotein domain family member 1 2 6
MIRT474602 KLF6 Kruppel like factor 6 2 2
MIRT475468 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT476648 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT476878 FEM1B fem-1 homolog B 2 2
MIRT476906 FBXL5 F-box and leucine rich repeat protein 5 2 12
MIRT477188 F3 coagulation factor III, tissue factor 2 8
MIRT477291 ERGIC2 ERGIC and golgi 2 2 2
MIRT478410 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT479045 COIL coilin 2 10
MIRT479061 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 8
MIRT479273 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT480523 C11orf30 EMSY, BRCA2 interacting transcriptional repressor 2 10
MIRT480557 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT480781 BMP2 bone morphogenetic protein 2 2 2
MIRT481213 ATXN7L3B ataxin 7 like 3B 2 2
MIRT481341 ATL3 atlastin GTPase 3 2 2
MIRT481800 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT481934 ANKRD11 ankyrin repeat domain 11 2 12
MIRT481962 ANKH ANKH inorganic pyrophosphate transport regulator 2 8
MIRT484826 ZNFX1 zinc finger NFX1-type containing 1 2 4
MIRT484913 ZFYVE26 zinc finger FYVE-type containing 26 2 4
MIRT485132 RRAS2 RAS related 2 2 6
MIRT485197 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 4
MIRT492016 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT492366 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493120 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT493391 KIAA0513 KIAA0513 2 6
MIRT493668 HBP1 HMG-box transcription factor 1 2 2
MIRT494069 DUSP2 dual specificity phosphatase 2 2 4
MIRT494385 SOLH calpain 15 1 1
MIRT494776 ANKRD33B ankyrin repeat domain 33B 2 10
MIRT496737 TRIM31 tripartite motif containing 31 2 2
MIRT497422 FAM46A family with sequence similarity 46 member A 2 2
MIRT498160 FEM1C fem-1 homolog C 2 8
MIRT498357 ABHD17B abhydrolase domain containing 17B 2 2
MIRT499911 KIAA1191 KIAA1191 2 4
MIRT500764 TMEM127 transmembrane protein 127 2 6
MIRT501461 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501956 MAPRE3 microtubule associated protein RP/EB family member 3 2 8
MIRT502368 GIGYF1 GRB10 interacting GYF protein 1 2 8
MIRT502408 GATA6 GATA binding protein 6 2 8
MIRT503445 GINS4 GINS complex subunit 4 2 4
MIRT503565 MDM2 MDM2 proto-oncogene 2 4
MIRT503614 ZNF780A zinc finger protein 780A 2 2
MIRT503833 TMEM242 transmembrane protein 242 2 4
MIRT504102 C9orf40 chromosome 9 open reading frame 40 2 6
MIRT505495 SRSF2 serine and arginine rich splicing factor 2 2 4
MIRT505741 SEPT2 septin 2 2 4
MIRT505977 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT506229 PFKP phosphofructokinase, platelet 2 8
MIRT506432 NAGK N-acetylglucosamine kinase 2 6
MIRT506455 NACC2 NACC family member 2 2 4
MIRT506515 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 4
MIRT506626 MARCH6 membrane associated ring-CH-type finger 6 2 8
MIRT506677 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT506839 KIF23 kinesin family member 23 2 4
MIRT506866 KIAA1147 KIAA1147 2 2
MIRT507190 FZD9 frizzled class receptor 9 2 6
MIRT507236 FOXK2 forkhead box K2 2 4
MIRT507363 FAM129A family with sequence similarity 129 member A 2 6
MIRT508089 ANKRD52 ankyrin repeat domain 52 2 2
MIRT508230 ZNF850 zinc finger protein 850 2 6
MIRT511090 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 4
MIRT511258 KLHL36 kelch like family member 36 2 6
MIRT512681 ENO4 enolase family member 4 2 2
MIRT512754 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT513471 NARS asparaginyl-tRNA synthetase 2 6
MIRT513903 GRB10 growth factor receptor bound protein 10 2 6
MIRT513985 CEP97 centrosomal protein 97 2 2
MIRT513999 CENPQ centromere protein Q 2 4
MIRT514036 BNIP2 BCL2 interacting protein 2 2 2
MIRT514106 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 6
MIRT515002 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT517025 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT517533 ITM2C integral membrane protein 2C 2 6
MIRT517825 KIAA2018 upstream transcription factor family member 3 2 4
MIRT524333 CRLF3 cytokine receptor like factor 3 2 4
MIRT524700 BTG3 BTG anti-proliferation factor 3 2 8
MIRT525208 ZNF93 zinc finger protein 93 2 2
MIRT527210 XIRP2 xin actin binding repeat containing 2 2 2
MIRT527478 CLEC12B C-type lectin domain family 12 member B 2 4
MIRT527889 SERF1B small EDRK-rich factor 1B 2 2
MIRT529345 SERF1A small EDRK-rich factor 1A 2 2
MIRT529613 H1F0 H1 histone family member 0 2 2
MIRT531822 ZNF264 zinc finger protein 264 2 6
MIRT531843 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT532091 RTTN rotatin 2 2
MIRT533391 U2SURP U2 snRNP associated SURP domain containing 2 6
MIRT533837 TGFBR2 transforming growth factor beta receptor 2 2 6
MIRT533885 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT534006 SUV420H1 lysine methyltransferase 5B 2 2
MIRT534053 STC2 stanniocalcin 2 2 2
MIRT534635 RNASEH1 ribonuclease H1 2 4
MIRT537732 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT537782 EIF4H eukaryotic translation initiation factor 4H 2 6
MIRT538015 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT538717 CAPRIN2 caprin family member 2 2 4
MIRT539719 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT540521 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT541290 GLO1 glyoxalase I 2 2
MIRT541747 ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 2 2
MIRT542030 PEX2 peroxisomal biogenesis factor 2 2 2
MIRT542067 SLC25A46 solute carrier family 25 member 46 2 2
MIRT542509 WDR13 WD repeat domain 13 2 2
MIRT542717 RPS15A ribosomal protein S15a 2 2
MIRT542890 KLHL15 kelch like family member 15 2 4
MIRT542953 GDF11 growth differentiation factor 11 2 2
MIRT543588 RPF2 ribosome production factor 2 homolog 2 6
MIRT544312 IFNGR1 interferon gamma receptor 1 2 4
MIRT545143 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT545210 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT546255 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT546294 TMEM200C transmembrane protein 200C 2 4
MIRT546459 SLC5A3 solute carrier family 5 member 3 2 4
MIRT546821 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT546843 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT547089 PLRG1 pleiotropic regulator 1 2 2
MIRT548229 FJX1 four jointed box 1 2 4
MIRT548339 EPHA4 EPH receptor A4 2 2
MIRT548392 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT548464 EGLN3 egl-9 family hypoxia inducible factor 3 2 2
MIRT548861 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT549108 C16orf70 chromosome 16 open reading frame 70 2 4
MIRT549252 ATXN1 ataxin 1 2 2
MIRT549415 ADAR adenosine deaminase, RNA specific 2 2
MIRT549830 LUZP2 leucine zipper protein 2 2 2
MIRT550101 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT550109 TAF6 TATA-box binding protein associated factor 6 2 2
MIRT550242 PVR poliovirus receptor 2 4
MIRT552212 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT552640 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT552693 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT553033 USP48 ubiquitin specific peptidase 48 2 2
MIRT553475 TNKS2 tankyrase 2 2 2
MIRT554302 SIPA1L2 signal induced proliferation associated 1 like 2 2 2
MIRT554330 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT554476 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT554531 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT554562 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 2
MIRT554612 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT554745 RHOC ras homolog family member C 2 2
MIRT554803 RGMB repulsive guidance molecule family member b 2 4
MIRT555000 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT555166 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT555242 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT556282 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT557830 FOXJ2 forkhead box J2 2 2
MIRT558221 EFCAB14 EF-hand calcium binding domain 14 2 4
MIRT558332 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558943 CBX1 chromobox 1 2 2
MIRT558965 CAMLG calcium modulating ligand 2 4
MIRT559440 ARSJ arylsulfatase family member J 2 2
MIRT561378 TXNIP thioredoxin interacting protein 2 2
MIRT561646 RUNX3 runt related transcription factor 3 2 2
MIRT562223 HMGB2 high mobility group box 2 2 2
MIRT562560 CCDC71L coiled-coil domain containing 71 like 2 4
MIRT562973 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT563387 DSPP dentin sialophosphoprotein 2 2
MIRT563439 TRIM27 tripartite motif containing 27 2 2
MIRT565554 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 2
MIRT566879 LRP12 LDL receptor related protein 12 2 2
MIRT567051 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT567121 ITGB1 integrin subunit beta 1 2 2
MIRT567551 FGFR1OP FGFR1 oncogene partner 2 2
MIRT567628 FAM210A family with sequence similarity 210 member A 2 2
MIRT567785 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT567917 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT570955 RBM12B RNA binding motif protein 12B 2 2
MIRT571022 CKAP2 cytoskeleton associated protein 2 2 2
MIRT571221 F2R coagulation factor II thrombin receptor 2 2
MIRT571702 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT571732 RPL17-C18orf32 RPL17-C18orf32 readthrough 2 2
MIRT571862 NKIRAS1 NFKB inhibitor interacting Ras like 1 2 2
MIRT572151 DESI1 desumoylating isopeptidase 1 2 2
MIRT572217 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT573377 LIMA1 LIM domain and actin binding 1 2 2
MIRT573924 SNAP47 synaptosome associated protein 47 2 2
MIRT574720 HAUS8 HAUS augmin like complex subunit 8 2 2
MIRT575857 Rab1 RAB1A, member RAS oncogene family 1 1
MIRT608982 PRKCB protein kinase C beta 2 2
MIRT611007 BRI3BP BRI3 binding protein 2 2
MIRT613680 SH3KBP1 SH3 domain containing kinase binding protein 1 2 2
MIRT615455 FAXC failed axon connections homolog 2 2
MIRT615880 MEMO1 mediator of cell motility 1 2 2
MIRT616444 FAM126B family with sequence similarity 126 member B 2 2
MIRT623529 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT624425 CBX8 chromobox 8 2 2
MIRT625087 C15orf41 chromosome 15 open reading frame 41 2 2
MIRT634463 PAK6 p21 (RAC1) activated kinase 6 2 2
MIRT640011 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT641801 USP32 ubiquitin specific peptidase 32 2 2
MIRT664802 LIAS lipoic acid synthetase 2 4
MIRT682525 GJD3 gap junction protein delta 3 2 2
MIRT688719 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT693162 THEM4 thioesterase superfamily member 4 2 2
MIRT694572 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT699679 SFT2D2 SFT2 domain containing 2 2 2
MIRT701600 MYPN myopalladin 2 2
MIRT701967 MINK1 misshapen like kinase 1 2 2
MIRT702948 HIPK3 homeodomain interacting protein kinase 3 2 2
MIRT702962 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT709508 RHOH ras homolog family member H 2 2
MIRT725232 PEA15 phosphoprotein enriched in astrocytes 15 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548ah-5p Temozolomide 5394 NSC362856 approved sensitive High Glioma tissue
hsa-miR-548ah-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-548ah-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-548ah-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-548ah-5p Cetuximab resistant tissue (colorectal carcinoma)

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