miRTarBase - #MIRT084059


—
pre-miRNA Information
pre-miRNA hsa-mir-4282   
Genomic Coordinates chr6: 72967687 - 72967753
Description Homo sapiens miR-4282 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4282
Sequence 40| UAAAAUUUGCAUCCAGGA |57
Evidence Experimental
Experiments SOLiD
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN32074657 13 COSMIC
COSN6331413 18 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1195771339 5 dbSNP
rs755058572 6 dbSNP
rs1245753664 11 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol PPP1R3D   
Synonyms PPP1R6
Description protein phosphatase 1 regulatory subunit 3D
Transcript NM_006242   
Expression
Putative miRNA Targets on PPP1R3D
3'UTR of PPP1R3D
(miRNA target sites are highlighted)		 
>PPP1R3D|NM_006242|3'UTR
   1 GCCGCGCGGGGACCGGCCACCTGGAGCCTCCACACCTAAGCTGCGCCTCCTGTCATTTCCCTGCTGGGCTCTCACATCTA
  81 TCTGGTTGTTCTTCACCACCCTCCAAGTCCTCTGACCTAATTTTCTGCTGCAAGGTCCCCTGGCAGTGGCCCATCCTGTC
 161 TTCTACTTGAAACGTCTGAGTCACTTGGTCTAAAAAGTAGCCTCAGGTGGCCAGAAGGCCGAGTTGTGTAATGAGTTGGG
 241 GCAGGGTGGTGGGGTAGGTGCATGGGAGGGTGGGCCCTCTGGGGAGGCCCAAGCAGCTTGTTTTGCAAAGGCCCAAGTCC
 321 TCCTGCTAGGAAAAGCTTTTGCATGTGTCCTGAATGTGTCTCTGTAAACATAGCTGTTATTTATTATTGTGATGTTGGGA
 401 CCTTTAGCCCATAGCGGATGCCTCCTCAGGAATATTCTCGATTTAATAAGCTAAAAAAAAAAAGTTCTGTGTTTGTGCCC
 481 ACAGTAAACAGAATGTACAGTGTGACCCACATCGTGGTCCCTCCAGGCATTCCTGCCCCAGGATAAGGAAAACCTGAGCC
 561 CACATCTGATTGCCAACGGCTGTAGCCTTCTAACAGTGGGAAACTATTAATAGGCAAGAAATTTCTGCTTTATCAGTCAT
 641 CACACAACCATTCCTGGGCATTGAGACTGTCCTGGTTAGGCTGTGTGTCTCCTACATTAACAGCTGGGGAGGAGGGAAAA
 721 GCTTCAGACTTTTAAACTAGCAAAACAGTTATTTCTCTGCATTCACAATTCTGATTTCATGTATTTCTCTGTACATGTTT
 801 GATCATTATCAGGCCATTCTGTTTAAGTTTGAAACTAAGCATTTTAAGAAGTCTTGCCTCAGTTATTTCAGTTTTCAGGT
 881 GACTAGAGAATTTCAGGCAACAGTGCCCTTTGCAATTACCTTTTTGATGATTAAGGTGACTATTTTTATTTCTTGTTAAG
 961 CATCAGAAGATGTCAGCATTCATCTTTTGGGAGTCCAGTTACAAGGTGGAACTAGAAGGTGTTTTCAGCAATAGCCAGAG
1041 CACTGGAGGAAAAATAATTGACAAATATTTATACTTTTAAATTGTTTTGAACTGTATTTACATACATCATGTTTTATCAG
1121 GTACCCACCAACTTTATACTTTCTGCCTTCAGATAGAGTTTCTAACATTTTCTAGTTTGTCAGTTTTAAAATATAAAATT
1201 CTTTTATGTTTTTAAACCGTCAACCAAGAAGTCAAGACCACTGTCCCCTGCTGAGTTAGGCAATCACTTAAAACTCCAAA
1281 GAACTCCAGGCTGAGGAGTTCTTTTGGTGCTGAACAGTGGTCTGACAACAGGTGCTAGAATTAAGGTGTGGGAAAAAAAA
1361 AAAAACAGCCAGGAAGGACAAGATCTCCAATTTGTGAAGCTTATGATACAGCTGAAACCAGTCTGATCAATTTTATGCTA
1441 CCTGTCACCAAGAAATTAACTCTAAATTTTTGAATGCTTGTTGGCATCTGTCAAATCAATACTGAAAGGATGCATTTCGG
1521 CTTTTAACCAGTTTGGTTCTGATCATTGCAACCTCTGTGCTTTTATAATTCAAAGAACAAGGATAGCTTTCTTCGGTATC
1601 TTTTAATATAAGAACACTGAATTTTGGCTTGAAATATTGTGACTAAATTGCACAATCTCTGGCTATTAGCACTGTTCACT
1681 ACATTAACATGCAAGAGAGAGAGAAGCCTTGTTACATTTCCTGCTATTTAACAAACTGTCCAATTAGGTCAGCAAGCCTG
1761 TTAGGGCCTTCACTGCTACGCCCCTGGCCCCAAAACAGAGAGCAAGACAGTTGTCCAGAGAATTTAGATATGAGTTAAGA
1841 GCTGCCAGATTTATTTTAAGGCATGTAGAGAATCTCATAATCTATGTGAAAGTCACTTGCCAAAAAGGTTTTGGTTATGA
1921 AAGTGAATGTTATATATTTAATATTAAGTGAACCTCCCGTGCCTTTTAAAAAATACCAACATTATGAAATTTAAAAGCTT
2001 AAATATATTTGCCTAGTTGATAAAGAGGCTGTGGAACAACTGAAGGAGAACTTTCAGACCCTAAAACAGTTATATTACTT
2081 AGATGTTAAAATTTTCTAGTGGGCTGTGCAATTGCTGGGTTGTCCCCCCAAACATATTTTAATATGTTATTTAAAATGAT
2161 TTTACCCAAGCCTAAGTATTAAAGTATATGTGCAAAAACAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agGACCUACG--UUUAAAAu 5'
            :| ||||:  ||||||| 
Target 5' acTTAGATGTTAAAATTTTc 3'
 2077 - 2096 154.00 -6.60
2 
miRNA  3' aggaCCUACG--------UUUAAAAu 5'
              ||||||        :||| || 
Target 5' tagcGGATGCCTCCTCAGGAATATTc 3'
 412 - 437 100.00 -5.88
3 
miRNA  3' aggaCCUAC-----GUUUAAAAu 5'
              |||||     |:: |||| 
Target 5' gaaaGGATGCATTTCGGCTTTTa 3'
 1504 - 1526 90.00 -8.37
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26990140 8 COSMIC
COSN1251400 17 COSMIC
COSN13870964 44 COSMIC
COSN30183249 54 COSMIC
COSN31490427 78 COSMIC
COSN1878413 83 COSMIC
COSN30147076 103 COSMIC
COSN30516663 109 COSMIC
COSN31580914 125 COSMIC
COSN31591637 173 COSMIC
COSN31594094 398 COSMIC
COSN29054432 452 COSMIC
COSN27220876 453 COSMIC
COSN31547378 455 COSMIC
COSN31517848 486 COSMIC
COSN22440245 780 COSMIC
COSN26840307 802 COSMIC
COSN5446862 858 COSMIC
COSN7100089 962 COSMIC
COSN32062557 1162 COSMIC
COSN5975976 1193 COSMIC
COSN31549417 1199 COSMIC
COSN26576169 1313 COSMIC
COSN22446724 1353 COSMIC
COSN27205582 1353 COSMIC
COSN31609687 1362 COSMIC
COSN32056750 1594 COSMIC
COSN31549419 1612 COSMIC
COSN6422087 1652 COSMIC
COSN7100088 1674 COSMIC
COSN31481976 1800 COSMIC
COSN14582911 1806 COSMIC
COSN26576636 1839 COSMIC
COSN31538342 1901 COSMIC
COSN21515205 1902 COSMIC
COSN31514668 1962 COSMIC
COSN31520641 1991 COSMIC
COSN25503989 2205 COSMIC
COSN22740007 2287 COSMIC
COSN21947990 2303 COSMIC
COSN29528940 2331 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs771583006 2 dbSNP
rs759003138 3 dbSNP
rs1303531486 4 dbSNP
rs774011048 5 dbSNP
rs770503231 7 dbSNP
rs749025787 8 dbSNP
rs777707019 10 dbSNP
rs769759075 11 dbSNP
rs1158478763 12 dbSNP
rs1179244262 14 dbSNP
rs748065432 15 dbSNP
rs371149280 17 dbSNP
rs1223651546 20 dbSNP
rs758454930 22 dbSNP
rs750477897 26 dbSNP
rs779121626 27 dbSNP
rs768235278 29 dbSNP
rs757463070 33 dbSNP
rs1278963693 34 dbSNP
rs1444711170 41 dbSNP
rs1237242027 44 dbSNP
rs200816379 45 dbSNP
rs765255477 51 dbSNP
rs902008790 62 dbSNP
rs556641157 72 dbSNP
rs1371099507 77 dbSNP
rs1278869982 80 dbSNP
rs1040533448 82 dbSNP
rs1448097911 87 dbSNP
rs1286504626 89 dbSNP
rs1358113081 91 dbSNP
rs914892161 129 dbSNP
rs62205073 132 dbSNP
rs1171320637 137 dbSNP
rs562273810 147 dbSNP
rs1053431782 152 dbSNP
rs1010883839 153 dbSNP
rs892048660 158 dbSNP
rs543792050 166 dbSNP
rs1418932682 174 dbSNP
rs747135495 178 dbSNP
rs866390870 178 dbSNP
rs936005729 180 dbSNP
rs184223920 187 dbSNP
rs1394884574 188 dbSNP
rs1433286443 189 dbSNP
rs1044480471 190 dbSNP
rs1403977234 199 dbSNP
rs1396101746 207 dbSNP
rs1327606294 208 dbSNP
rs1184159302 214 dbSNP
rs1483599657 217 dbSNP
rs200448280 220 dbSNP
rs950141873 221 dbSNP
rs1237006125 225 dbSNP
rs1309938695 229 dbSNP
rs970571606 234 dbSNP
rs540471573 235 dbSNP
rs1346853013 236 dbSNP
rs908337797 238 dbSNP
rs983107678 242 dbSNP
rs1345987245 246 dbSNP
rs952637225 249 dbSNP
rs1256260401 251 dbSNP
rs1459449165 254 dbSNP
rs1179775311 258 dbSNP
rs1252974212 259 dbSNP
rs1431789245 266 dbSNP
rs1489400324 268 dbSNP
rs1201548267 269 dbSNP
rs1378934082 271 dbSNP
rs1027413953 276 dbSNP
rs907777861 287 dbSNP
rs1239152827 289 dbSNP
rs1314968861 295 dbSNP
rs985152312 300 dbSNP
rs573061456 302 dbSNP
rs964020748 311 dbSNP
rs1228850630 312 dbSNP
rs1028647125 313 dbSNP
rs1227003241 314 dbSNP
rs537818398 317 dbSNP
rs1320061757 319 dbSNP
rs1199414672 320 dbSNP
rs1377751056 322 dbSNP
rs1273101094 325 dbSNP
rs15068 331 dbSNP
rs1487793567 340 dbSNP
rs1211943010 344 dbSNP
rs1310558572 354 dbSNP
rs1428335602 359 dbSNP
rs564237648 361 dbSNP
rs1019749883 363 dbSNP
rs1421097338 371 dbSNP
rs974437141 373 dbSNP
rs1008307116 376 dbSNP
rs1170783037 377 dbSNP
rs1297265809 378 dbSNP
rs779797867 380 dbSNP
rs546040478 381 dbSNP
rs1295027128 383 dbSNP
rs1391139075 390 dbSNP
rs1381484109 393 dbSNP
rs1012258851 394 dbSNP
rs893358514 395 dbSNP
rs1167475788 402 dbSNP
rs1219256971 407 dbSNP
rs1292761028 411 dbSNP
rs1320391736 413 dbSNP
rs191831194 414 dbSNP
rs1266597274 415 dbSNP
rs556728339 416 dbSNP
rs1033260897 420 dbSNP
rs1260512514 439 dbSNP
rs1185902829 447 dbSNP
rs1478881667 450 dbSNP
rs1264154677 451 dbSNP
rs1204817866 452 dbSNP
rs1000471616 458 dbSNP
rs186100642 459 dbSNP
rs1046141834 461 dbSNP
rs1044427951 464 dbSNP
rs905848851 464 dbSNP
rs774328396 467 dbSNP
rs1166799813 468 dbSNP
rs1484748909 473 dbSNP
rs1267018600 479 dbSNP
rs908390258 481 dbSNP
rs982608416 484 dbSNP
rs1362626906 486 dbSNP
rs952639324 501 dbSNP
rs1312541936 510 dbSNP
rs919876947 513 dbSNP
rs895906266 514 dbSNP
rs1314062043 525 dbSNP
rs1316853365 528 dbSNP
rs780336779 529 dbSNP
rs1288634259 532 dbSNP
rs6100662 533 dbSNP
rs1355360796 540 dbSNP
rs940533334 551 dbSNP
rs6100661 554 dbSNP
rs907725597 556 dbSNP
rs1222144706 557 dbSNP
rs1321056396 560 dbSNP
rs1156557855 568 dbSNP
rs1439022454 568 dbSNP
rs573931707 577 dbSNP
rs180740319 578 dbSNP
rs1019590736 579 dbSNP
rs1450217837 584 dbSNP
rs1303516591 586 dbSNP
rs6100660 587 dbSNP
rs1340653823 593 dbSNP
rs7347729 597 dbSNP
rs1312145728 600 dbSNP
rs986883405 601 dbSNP
rs967463075 602 dbSNP
rs1380195984 603 dbSNP
rs1234088077 608 dbSNP
rs1277469240 613 dbSNP
rs1310078817 614 dbSNP
rs1020884306 616 dbSNP
rs1256096458 620 dbSNP
rs1457231813 629 dbSNP
rs190171257 631 dbSNP
rs1295664710 635 dbSNP
rs1176678908 640 dbSNP
rs567075679 641 dbSNP
rs1458803770 643 dbSNP
rs772399329 644 dbSNP
rs1394387140 654 dbSNP
rs974384980 667 dbSNP
rs1163473303 668 dbSNP
rs893294027 690 dbSNP
rs1424463136 692 dbSNP
rs1034644727 695 dbSNP
rs1176835073 704 dbSNP
rs185611500 721 dbSNP
rs1464175147 723 dbSNP
rs539681597 737 dbSNP
rs568605770 738 dbSNP
rs78249823 739 dbSNP
rs1426976682 747 dbSNP
rs1001709804 751 dbSNP
rs1269120388 755 dbSNP
rs550305155 757 dbSNP
rs1191555092 769 dbSNP
rs1046024319 781 dbSNP
rs1301589817 785 dbSNP
rs949152708 789 dbSNP
rs1196285664 791 dbSNP
rs1300867576 793 dbSNP
rs150603485 809 dbSNP
rs1047232698 812 dbSNP
rs1458169688 815 dbSNP
rs1220497767 825 dbSNP
rs1244797382 831 dbSNP
rs780635360 833 dbSNP
rs561683452 847 dbSNP
rs1200499743 850 dbSNP
rs1172908885 858 dbSNP
rs1401586203 888 dbSNP
rs1405313623 893 dbSNP
rs1321941080 898 dbSNP
rs368704207 899 dbSNP
rs1351951496 904 dbSNP
rs1437704815 908 dbSNP
rs1303378018 921 dbSNP
rs1339452204 927 dbSNP
rs1216190102 931 dbSNP
rs546292974 933 dbSNP
rs750968095 944 dbSNP
rs1339954175 946 dbSNP
rs764704723 950 dbSNP
rs1287706104 960 dbSNP
rs1014257405 974 dbSNP
rs756780663 990 dbSNP
rs1250288756 992 dbSNP
rs1224716257 997 dbSNP
rs1332466912 1006 dbSNP
rs1301622747 1019 dbSNP
rs73309270 1030 dbSNP
rs1370784765 1039 dbSNP
rs942552636 1040 dbSNP
rs912583051 1042 dbSNP
rs1467665805 1044 dbSNP
rs1401051797 1056 dbSNP
rs1416673782 1061 dbSNP
rs564399570 1062 dbSNP
rs546005378 1072 dbSNP
rs1460591024 1073 dbSNP
rs1379579407 1075 dbSNP
rs1158435850 1094 dbSNP
rs1177125049 1096 dbSNP
rs967767825 1099 dbSNP
rs1299701125 1103 dbSNP
rs1326487784 1106 dbSNP
rs1446723545 1107 dbSNP
rs1453545344 1111 dbSNP
rs575550821 1112 dbSNP
rs1282348937 1119 dbSNP
rs563477583 1129 dbSNP
rs1246361620 1132 dbSNP
rs763822426 1139 dbSNP
rs1048901076 1143 dbSNP
rs1351729924 1147 dbSNP
rs1219034661 1156 dbSNP
rs1262754214 1182 dbSNP
rs371441327 1186 dbSNP
rs930525334 1189 dbSNP
rs921861681 1201 dbSNP
rs1249126879 1203 dbSNP
rs990633359 1206 dbSNP
rs1158380360 1208 dbSNP
rs1378824698 1208 dbSNP
rs544654422 1214 dbSNP
rs1034443653 1216 dbSNP
rs1160075360 1218 dbSNP
rs73131315 1219 dbSNP
rs1233163483 1225 dbSNP
rs1331637502 1228 dbSNP
rs1347550105 1236 dbSNP
rs1453324287 1242 dbSNP
rs1308495216 1245 dbSNP
rs760305474 1248 dbSNP
rs778447661 1261 dbSNP
rs907436811 1263 dbSNP
rs1024500032 1264 dbSNP
rs573414199 1266 dbSNP
rs181185659 1269 dbSNP
rs886771984 1271 dbSNP
rs1198755170 1274 dbSNP
rs190393871 1279 dbSNP
rs955995493 1282 dbSNP
rs1046843517 1286 dbSNP
rs1389723913 1287 dbSNP
rs1236949137 1290 dbSNP
rs1441922323 1293 dbSNP
rs1404497116 1299 dbSNP
rs1363958857 1300 dbSNP
rs926118035 1301 dbSNP
rs1170251280 1308 dbSNP
rs978928689 1309 dbSNP
rs931022382 1312 dbSNP
rs1469913183 1314 dbSNP
rs1330576696 1332 dbSNP
rs1434359034 1334 dbSNP
rs1392970149 1341 dbSNP
rs753161261 1346 dbSNP
rs62205072 1350 dbSNP
rs1448645241 1352 dbSNP
rs1023220475 1353 dbSNP
rs76458760 1353 dbSNP
rs1276883760 1354 dbSNP
rs1324363106 1363 dbSNP
rs960056021 1365 dbSNP
rs1039532025 1366 dbSNP
rs1256640008 1366 dbSNP
rs1459488173 1366 dbSNP
rs544890202 1366 dbSNP
rs767465752 1366 dbSNP
rs942605192 1367 dbSNP
rs746387578 1368 dbSNP
rs1467151574 1370 dbSNP
rs1016024928 1373 dbSNP
rs1389725572 1378 dbSNP
rs1179635188 1383 dbSNP
rs1384924111 1388 dbSNP
rs1325773142 1398 dbSNP
rs1004278586 1400 dbSNP
rs888533815 1401 dbSNP
rs1048849719 1409 dbSNP
rs1228753257 1419 dbSNP
rs912510902 1423 dbSNP
rs986714977 1428 dbSNP
rs1487702046 1437 dbSNP
rs1484489072 1439 dbSNP
rs1212074616 1440 dbSNP
rs946104603 1446 dbSNP
rs900380816 1455 dbSNP
rs1038908514 1458 dbSNP
rs1351915155 1460 dbSNP
rs913192003 1464 dbSNP
rs1429830189 1473 dbSNP
rs1279459449 1490 dbSNP
rs990256016 1496 dbSNP
rs185008876 1498 dbSNP
rs1367893444 1500 dbSNP
rs1456140371 1502 dbSNP
rs866467972 1509 dbSNP
rs545535536 1510 dbSNP
rs1342297762 1512 dbSNP
rs539639611 1518 dbSNP
rs759742971 1519 dbSNP
rs971521009 1524 dbSNP
rs1313578903 1527 dbSNP
rs1480821673 1528 dbSNP
rs1320447165 1532 dbSNP
rs1247378635 1538 dbSNP
rs1292998156 1546 dbSNP
rs934388270 1557 dbSNP
rs754092425 1558 dbSNP
rs1005536563 1559 dbSNP
rs951086766 1560 dbSNP
rs1300347085 1578 dbSNP
rs1420061588 1582 dbSNP
rs1186600922 1583 dbSNP
rs1025693019 1585 dbSNP
rs569059316 1594 dbSNP
rs142809122 1595 dbSNP
rs1385597909 1598 dbSNP
rs1473744360 1607 dbSNP
rs993051729 1608 dbSNP
rs535496873 1612 dbSNP
rs1186599921 1616 dbSNP
rs1347242004 1617 dbSNP
rs1454314843 1637 dbSNP
rs767256884 1639 dbSNP
rs1015557641 1640 dbSNP
rs1377572644 1647 dbSNP
rs1473971487 1652 dbSNP
rs1316415092 1655 dbSNP
rs759527897 1658 dbSNP
rs1238517376 1661 dbSNP
rs890957770 1665 dbSNP
rs1283362253 1668 dbSNP
rs1318373370 1674 dbSNP
rs1004632023 1690 dbSNP
rs952778815 1695 dbSNP
rs1482010631 1698 dbSNP
rs1027022634 1699 dbSNP
rs368711054 1705 dbSNP
rs577562621 1705 dbSNP
rs1438845062 1707 dbSNP
rs900330006 1708 dbSNP
rs1051018055 1713 dbSNP
rs1038854726 1715 dbSNP
rs1419929299 1716 dbSNP
rs1175672180 1726 dbSNP
rs568083386 1728 dbSNP
rs1471031374 1737 dbSNP
rs1337960099 1738 dbSNP
rs890370623 1742 dbSNP
rs1444959091 1743 dbSNP
rs1052752602 1753 dbSNP
rs913252847 1755 dbSNP
rs1375010475 1756 dbSNP
rs1223961241 1760 dbSNP
rs1232739009 1766 dbSNP
rs1309920015 1779 dbSNP
rs760827016 1780 dbSNP
rs1353698365 1781 dbSNP
rs1054835225 1791 dbSNP
rs934312741 1792 dbSNP
rs904213309 1796 dbSNP
rs1042814811 1799 dbSNP
rs948465658 1800 dbSNP
rs748925841 1803 dbSNP
rs993409039 1803 dbSNP
rs1190818162 1804 dbSNP
rs1423408827 1810 dbSNP
rs1481422510 1811 dbSNP
rs1177267439 1820 dbSNP
rs1423480492 1827 dbSNP
rs938915138 1831 dbSNP
rs1331503535 1838 dbSNP
rs936003930 1847 dbSNP
rs1355452115 1850 dbSNP
rs769957374 1858 dbSNP
rs908781574 1861 dbSNP
rs1343258623 1862 dbSNP
rs1315965999 1863 dbSNP
rs983092082 1873 dbSNP
rs773233290 1875 dbSNP
rs1283394288 1877 dbSNP
rs927407352 1880 dbSNP
rs1316799475 1886 dbSNP
rs1391345484 1889 dbSNP
rs1216698988 1894 dbSNP
rs952801586 1902 dbSNP
rs1026970368 1907 dbSNP
rs768623905 1907 dbSNP
rs971571638 1908 dbSNP
rs964113454 1910 dbSNP
rs1164183764 1914 dbSNP
rs1490909541 1920 dbSNP
rs917381306 1923 dbSNP
rs1262522314 1932 dbSNP
rs1233177467 1933 dbSNP
rs1488317182 1933 dbSNP
rs983723237 1945 dbSNP
rs1425186578 1948 dbSNP
rs748245304 1949 dbSNP
rs1009154075 1953 dbSNP
rs182404360 1958 dbSNP
rs1303433087 1960 dbSNP
rs951006935 1968 dbSNP
rs1241827571 1974 dbSNP
rs890328940 1975 dbSNP
rs1031988227 1981 dbSNP
rs1025319629 1983 dbSNP
rs1453748426 1985 dbSNP
rs1274333262 1993 dbSNP
rs1362585062 1999 dbSNP
rs73309268 2032 dbSNP
rs1289356107 2040 dbSNP
rs1361383859 2044 dbSNP
rs1042764284 2050 dbSNP
rs1487348544 2051 dbSNP
rs1332715585 2069 dbSNP
rs962351346 2071 dbSNP
rs1260101491 2073 dbSNP
rs1472771435 2073 dbSNP
rs948413430 2076 dbSNP
rs770136278 2083 dbSNP
rs1387447443 2086 dbSNP
rs1425751288 2096 dbSNP
rs41276970 2100 dbSNP
rs1006612140 2109 dbSNP
rs1361522173 2115 dbSNP
rs1326908237 2120 dbSNP
rs1268697526 2124 dbSNP
rs564363978 2128 dbSNP
rs1308717789 2131 dbSNP
rs1348829101 2133 dbSNP
rs1051350848 2134 dbSNP
rs556542519 2135 dbSNP
rs1010168129 2136 dbSNP
rs1325090722 2138 dbSNP
rs908731358 2142 dbSNP
rs891736891 2143 dbSNP
rs1245583944 2146 dbSNP
rs1441964921 2146 dbSNP
rs983424083 2146 dbSNP
rs1445544512 2151 dbSNP
rs1401765328 2153 dbSNP
rs1054361238 2163 dbSNP
rs1379250467 2165 dbSNP
rs1468305767 2176 dbSNP
rs552453386 2179 dbSNP
rs1170543989 2181 dbSNP
rs936043716 2189 dbSNP
rs190262821 2194 dbSNP
rs1044467411 2204 dbSNP
rs563440143 2208 dbSNP
rs142125979 2210 dbSNP
rs1334607050 2215 dbSNP
rs1408218920 2216 dbSNP
rs919902603 2216 dbSNP
rs867822974 2229 dbSNP
rs1334165757 2232 dbSNP
rs1241415547 2234 dbSNP
rs917433722 2236 dbSNP
rs35204126 2237 dbSNP
rs1344392325 2240 dbSNP
rs983994351 2244 dbSNP
rs1221767515 2251 dbSNP
rs1479192127 2256 dbSNP
rs370528560 2259 dbSNP
rs138930162 2260 dbSNP
rs201204259 2261 dbSNP
rs1467531231 2262 dbSNP
rs1364087404 2265 dbSNP
rs973677190 2269 dbSNP
rs1240643776 2280 dbSNP
rs962379891 2285 dbSNP
rs1173653785 2288 dbSNP
rs540615319 2289 dbSNP
rs1224093150 2290 dbSNP
rs1017915887 2295 dbSNP
rs985226491 2305 dbSNP
rs1330638501 2306 dbSNP
rs955079674 2307 dbSNP
rs1271106215 2317 dbSNP
rs865966657 2329 dbSNP
rs144347902 2330 dbSNP
rs1403126745 2333 dbSNP
rs1285305434 2342 dbSNP
rs1010511009 2350 dbSNP
rs574629186 2356 dbSNP
rs1033378202 2359 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293
Disease 5509.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "HITS-CLIP data was present in GSM714642. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_006242 | 3UTR | UCUAAAUUUUUGAAUGCUUGUUGGCAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714642
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000370996.3 | 3UTR | UUAAAAUUUUCUAGUGGGCUGUGCAAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
280 hsa-miR-4282 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057628 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT060732 RPS3 ribosomal protein S3 2 2
MIRT063371 ETNK1 ethanolamine kinase 1 2 2
MIRT066257 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT070774 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT070871 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT078056 PCTP phosphatidylcholine transfer protein 2 2
MIRT078408 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT084059 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT093537 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096072 SFXN1 sideroflexin 1 2 2
MIRT098316 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT100493 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT102254 HBP1 HMG-box transcription factor 1 2 4
MIRT105318 VPS37A VPS37A, ESCRT-I subunit 2 2
MIRT114143 MZT1 mitotic spindle organizing protein 1 2 4
MIRT114873 DICER1 dicer 1, ribonuclease III 2 2
MIRT134683 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT137640 RCOR1 REST corepressor 1 2 2
MIRT155449 CCNT2 cyclin T2 2 4
MIRT165656 DCTN4 dynactin subunit 4 2 2
MIRT177570 CSTF2T cleavage stimulation factor subunit 2 tau variant 2 4
MIRT188514 E2F7 E2F transcription factor 7 2 10
MIRT193019 TMOD3 tropomodulin 3 2 4
MIRT195823 GADD45A growth arrest and DNA damage inducible alpha 2 2
MIRT195885 DEPDC1 DEP domain containing 1 2 6
MIRT206029 NUP50 nucleoporin 50 2 6
MIRT212148 CLCN3 chloride voltage-gated channel 3 2 2
MIRT213999 DCP2 decapping mRNA 2 2 2
MIRT214650 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT221568 CBX3 chromobox 3 2 2
MIRT224544 ZNF623 zinc finger protein 623 2 2
MIRT227654 SET SET nuclear proto-oncogene 2 2
MIRT229992 CHIC1 cysteine rich hydrophobic domain 1 2 2
MIRT238968 QKI QKI, KH domain containing RNA binding 2 2
MIRT239825 ACTB actin beta 2 2
MIRT241084 ZXDA zinc finger, X-linked, duplicated A 2 4
MIRT244852 ZBTB5 zinc finger and BTB domain containing 5 2 2
MIRT264534 TARDBP TAR DNA binding protein 2 2
MIRT271438 SKI SKI proto-oncogene 2 2
MIRT271597 ENAH ENAH, actin regulator 2 2
MIRT294332 ZNF264 zinc finger protein 264 2 2
MIRT296341 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT301715 TEF TEF, PAR bZIP transcription factor 2 2
MIRT308549 ZNF654 zinc finger protein 654 2 2
MIRT313866 DEPDC1B DEP domain containing 1B 2 2
MIRT315529 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT321066 RABGEF1 RAB guanine nucleotide exchange factor 1 2 2
MIRT343777 NUTF2 nuclear transport factor 2 2 2
MIRT359109 MAP1B microtubule associated protein 1B 2 2
MIRT397393 GOLGA3 golgin A3 2 4
MIRT400822 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT442171 DSEL dermatan sulfate epimerase-like 2 2
MIRT442777 JAG1 jagged 1 2 2
MIRT442862 SCARF1 scavenger receptor class F member 1 2 4
MIRT442919 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT444567 TRA2B transformer 2 beta homolog 2 2
MIRT444718 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 2
MIRT445018 RBMS3 RNA binding motif single stranded interacting protein 3 2 2
MIRT445853 LRRC1 leucine rich repeat containing 1 2 2
MIRT446242 HELZ helicase with zinc finger 2 2
MIRT446542 GOLGA8B golgin A8 family member B 2 2
MIRT446643 SPTY2D1 SPT2 chromatin protein domain containing 1 2 2
MIRT446948 ZMAT3 zinc finger matrin-type 3 2 4
MIRT447061 KCNAB1 potassium voltage-gated channel subfamily A member regulatory beta subunit 1 2 2
MIRT447327 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447995 CDX1 caudal type homeobox 1 2 2
MIRT448543 RHEBP1 RHEB pseudogene 1 2 6
MIRT448752 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT448772 GOLGA8A golgin A8 family member A 2 2
MIRT449342 WDR26 WD repeat domain 26 2 2
MIRT450011 SLC16A6 solute carrier family 16 member 6 2 4
MIRT450229 PCNX pecanex homolog 1 2 2
MIRT450340 MRPL17 mitochondrial ribosomal protein L17 2 4
MIRT450381 MSI2 musashi RNA binding protein 2 2 2
MIRT450759 PGGT1B protein geranylgeranyltransferase type I subunit beta 2 2
MIRT450809 NRCAM neuronal cell adhesion molecule 2 2
MIRT450947 ATAD2 ATPase family, AAA domain containing 2 2 2
MIRT459095 CCPG1 cell cycle progression 1 2 2
MIRT462428 TWISTNB TWIST neighbor 2 2
MIRT465200 TROVE2 TROVE domain family member 2 2 4
MIRT467382 SON SON DNA binding protein 2 4
MIRT468546 SERP1 stress associated endoplasmic reticulum protein 1 2 2
MIRT471506 PDE4D phosphodiesterase 4D 2 2
MIRT471981 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT474478 KLHL11 kelch like family member 11 2 8
MIRT475011 KANSL1 KAT8 regulatory NSL complex subunit 1 2 8
MIRT480341 C5orf51 chromosome 5 open reading frame 51 2 2
MIRT482696 TEX9 testis expressed 9 2 6
MIRT483462 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 6
MIRT485623 FAM217B family with sequence similarity 217 member B 2 2
MIRT485714 CASP16 caspase 16, pseudogene 2 8
MIRT486279 SEC23A Sec23 homolog A, coat complex II component 2 2
MIRT491000 PEBP1 phosphatidylethanolamine binding protein 1 2 4
MIRT492594 PPIL4 peptidylprolyl isomerase like 4 2 2
MIRT493365 KIF5B kinesin family member 5B 2 2
MIRT494316 CDKN1B cyclin dependent kinase inhibitor 1B 2 2
MIRT495208 EDN3 endothelin 3 2 2
MIRT497011 TCF15 transcription factor 15 2 2
MIRT498512 FRK fyn related Src family tyrosine kinase 2 2
MIRT498778 PARP15 poly(ADP-ribose) polymerase family member 15 2 2
MIRT501045 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 6
MIRT502939 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504806 VHL von Hippel-Lindau tumor suppressor 2 6
MIRT505656 SHMT1 serine hydroxymethyltransferase 1 2 6
MIRT505964 RAB5C RAB5C, member RAS oncogene family 2 6
MIRT506322 OTUD4 OTU deubiquitinase 4 2 4
MIRT506803 KLHL15 kelch like family member 15 2 6
MIRT506917 KBTBD8 kelch repeat and BTB domain containing 8 2 4
MIRT507400 EMC7 ER membrane protein complex subunit 7 2 8
MIRT507471 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 6
MIRT508058 ATP13A3 ATPase 13A3 2 4
MIRT508135 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT509895 RPS23 ribosomal protein S23 2 4
MIRT510881 RAN RAN, member RAS oncogene family 2 8
MIRT513766 PEX5L peroxisomal biogenesis factor 5 like 2 4
MIRT516898 COPS8 COP9 signalosome subunit 8 2 2
MIRT518703 TIMD4 T-cell immunoglobulin and mucin domain containing 4 2 4
MIRT520429 TTPAL alpha tocopherol transfer protein like 2 6
MIRT521843 PNISR PNN interacting serine and arginine rich protein 2 4
MIRT522116 NUDT3 nudix hydrolase 3 2 4
MIRT525467 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT525583 MTRNR2L7 MT-RNR2-like 7 2 2
MIRT525906 BUB1 BUB1 mitotic checkpoint serine/threonine kinase 2 2
MIRT526072 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT526232 MTRNR2L5 MT-RNR2-like 5 2 4
MIRT526455 FAM71F2 family with sequence similarity 71 member F2 2 4
MIRT526515 POU5F1B POU class 5 homeobox 1B 2 2
MIRT528032 FEZ2 fasciculation and elongation protein zeta 2 2 2
MIRT528422 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT528995 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 4
MIRT529311 ATRNL1 attractin like 1 2 2
MIRT529376 SKP1 S-phase kinase associated protein 1 2 4
MIRT530015 SRRM1 serine and arginine repetitive matrix 1 2 2
MIRT530089 FMN2 formin 2 2 2
MIRT530942 ENPP6 ectonucleotide pyrophosphatase/phosphodiesterase 6 2 2
MIRT531229 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT533088 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT533299 USP46 ubiquitin specific peptidase 46 2 2
MIRT533318 UNKL unkempt family like zinc finger 2 2
MIRT533721 TMEM30A transmembrane protein 30A 2 2
MIRT534096 AZF1 azoospermia factor 1 2 2
MIRT534188 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534493 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT536077 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT536242 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT537524 FAM104A family with sequence similarity 104 member A 2 2
MIRT538088 DGKH diacylglycerol kinase eta 2 2
MIRT538475 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT538853 BTG1 BTG anti-proliferation factor 1 2 4
MIRT539075 GDNF glial cell derived neurotrophic factor 2 2
MIRT539480 ACVR2B activin A receptor type 2B 2 4
MIRT540210 ARHGAP18 Rho GTPase activating protein 18 2 2
MIRT541940 TSPAN2 tetraspanin 2 2 2
MIRT543812 COCH cochlin 2 2
MIRT545120 PDZRN4 PDZ domain containing ring finger 4 2 2
MIRT545571 GIMAP4 GTPase, IMAP family member 4 2 2
MIRT545989 XKR4 XK related 4 2 2
MIRT547213 PANK3 pantothenate kinase 3 2 4
MIRT547740 KIAA1468 KIAA1468 2 2
MIRT548022 GRB2 growth factor receptor bound protein 2 2 4
MIRT548032 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548102 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 4
MIRT548217 FKBP1A FK506 binding protein 1A 2 2
MIRT548588 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT548953 CDC27 cell division cycle 27 2 2
MIRT549072 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT550368 INCENP inner centromere protein 2 6
MIRT550546 MYZAP myocardial zonula adherens protein 2 2
MIRT551491 TMEM192 transmembrane protein 192 2 4
MIRT553078 UEVLD UEV and lactate/malate dehyrogenase domains 2 2
MIRT554104 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT555127 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT555477 POC1B-GALNT4 POC1B-GALNT4 readthrough 2 2
MIRT555978 NPTN neuroplastin 2 2
MIRT557011 HPRT1 hypoxanthine phosphoribosyltransferase 1 2 2
MIRT557706 GALNT4 polypeptide N-acetylgalactosaminyltransferase 4 2 2
MIRT558333 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558488 DBN1 drebrin 1 2 2
MIRT559942 ZNF567 zinc finger protein 567 2 2
MIRT561127 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT561791 PAWR pro-apoptotic WT1 regulator 2 2
MIRT562438 EEF2 eukaryotic translation elongation factor 2 2 2
MIRT563102 PABPC4L poly(A) binding protein cytoplasmic 4 like 2 2
MIRT563212 ZNF813 zinc finger protein 813 2 2
MIRT563426 KIF3A kinesin family member 3A 2 2
MIRT563473 SPIN4 spindlin family member 4 2 2
MIRT564015 HSPA4 heat shock protein family A (Hsp70) member 4 2 4
MIRT564117 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT564223 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT564503 CACNG1 calcium voltage-gated channel auxiliary subunit gamma 1 2 2
MIRT564515 DUSP3 dual specificity phosphatase 3 2 2
MIRT564811 ZBTB21 zinc finger and BTB domain containing 21 2 2
MIRT565265 TPD52 tumor protein D52 2 2
MIRT566012 RHOB ras homolog family member B 2 2
MIRT566216 PTMA prothymosin, alpha 2 2
MIRT566638 NFYA nuclear transcription factor Y subunit alpha 2 2
MIRT566821 MAPK8 mitogen-activated protein kinase 8 2 2
MIRT566948 LEPROT leptin receptor overlapping transcript 2 2
MIRT567290 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 2 2
MIRT567895 CSTF2 cleavage stimulation factor subunit 2 2 2
MIRT568731 MTRNR2L3 MT-RNR2-like 3 2 2
MIRT571263 ZNF239 zinc finger protein 239 2 2
MIRT572593 EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4 2 2
MIRT573827 TGOLN2 trans-golgi network protein 2 2 2
MIRT576391 Fhl2 four and a half LIM domains 2 2 2
MIRT609901 SMS spermine synthase 2 2
MIRT613710 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 2
MIRT614406 ADAT1 adenosine deaminase, tRNA specific 1 2 2
MIRT615042 DCX doublecortin 2 2
MIRT617514 C5orf45 MRN complex interacting protein 2 2
MIRT619476 PRDM10 PR/SET domain 10 2 2
MIRT620349 TLN1 talin 1 2 2
MIRT620910 PLA2G7 phospholipase A2 group VII 2 2
MIRT622131 SP4 Sp4 transcription factor 2 2
MIRT622955 OTUD7B OTU deubiquitinase 7B 2 2
MIRT623351 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT623619 INTU inturned planar cell polarity protein 2 2
MIRT624409 CCDC171 coiled-coil domain containing 171 2 2
MIRT625171 CCS copper chaperone for superoxide dismutase 2 2
MIRT625685 RPP40 ribonuclease P/MRP subunit p40 2 2
MIRT625875 ALDH18A1 aldehyde dehydrogenase 18 family member A1 2 2
MIRT626002 FAM107A family with sequence similarity 107 member A 2 2
MIRT626872 HRH4 histamine receptor H4 2 4
MIRT628220 FKBP9 FK506 binding protein 9 2 2
MIRT628265 DIO2 iodothyronine deiodinase 2 2 2
MIRT628402 C8orf37 chromosome 8 open reading frame 37 2 2
MIRT630564 C3orf36 chromosome 3 open reading frame 36 2 4
MIRT631577 RASSF9 Ras association domain family member 9 2 2
MIRT635730 CCDC58 coiled-coil domain containing 58 2 2
MIRT636224 SLC8A1 solute carrier family 8 member A1 2 2
MIRT636613 CLIC5 chloride intracellular channel 5 2 2
MIRT638899 CDK9 cyclin dependent kinase 9 2 2
MIRT640167 ATXN7L1 ataxin 7 like 1 2 2
MIRT642070 GTDC1 glycosyltransferase like domain containing 1 2 2
MIRT643034 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 2 2
MIRT644572 SPOP speckle type BTB/POZ protein 2 2
MIRT644954 IFNB1 interferon beta 1 2 2
MIRT645948 TTF2 transcription termination factor 2 2 2
MIRT646440 XRCC2 X-ray repair cross complementing 2 2 2
MIRT647896 EPN2 epsin 2 2 2
MIRT648276 ZNF582 zinc finger protein 582 2 2
MIRT649381 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 2 2
MIRT650254 CD68 CD68 molecule 2 2
MIRT650333 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT651707 VMP1 vacuole membrane protein 1 2 2
MIRT651774 VASP vasodilator stimulated phosphoprotein 2 2
MIRT653144 SRPK2 SRSF protein kinase 2 2 2
MIRT654112 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT654161 RORB RAR related orphan receptor B 2 2
MIRT655716 MLF2 myeloid leukemia factor 2 2 2
MIRT657476 HDAC4 histone deacetylase 4 2 2
MIRT658095 FOXO1 forkhead box O1 2 2
MIRT658860 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT658988 DNAJA1 DnaJ heat shock protein family (Hsp40) member A1 2 2
MIRT660767 ALDH6A1 aldehyde dehydrogenase 6 family member A1 2 2
MIRT661622 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT661694 TFDP2 transcription factor Dp-2 2 2
MIRT662208 PLA2G4E phospholipase A2 group IVE 2 2
MIRT662443 RALGAPA1 Ral GTPase activating protein catalytic alpha subunit 1 2 2
MIRT664422 ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 2 2
MIRT687505 NECAB1 N-terminal EF-hand calcium binding protein 1 2 2
MIRT689910 SOD2 superoxide dismutase 2 2 2
MIRT690781 PLA2G2C phospholipase A2 group IIC 2 2
MIRT698488 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT699685 SFMBT2 Scm like with four mbt domains 2 2 2
MIRT700926 PDS5A PDS5 cohesin associated factor A 2 2
MIRT702258 LMNB1 lamin B1 2 2
MIRT703166 GPR137C G protein-coupled receptor 137C 2 2
MIRT703242 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT704737 CENPQ centromere protein Q 2 2
MIRT707310 GLRX2 glutaredoxin 2 2 2
MIRT710021 KCNQ5 potassium voltage-gated channel subfamily Q member 5 2 2
MIRT712212 SCOC short coiled-coil protein 2 2
MIRT714742 SETBP1 SET binding protein 1 2 2
MIRT718268 ZNF749 zinc finger protein 749 2 2
MIRT720553 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT722248 RBM41 RNA binding motif protein 41 2 2
MIRT723767 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT723977 KIAA0146 scaffolding protein involved in DNA repair 1 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4282 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)
hsa-miR-4282 Neoadjuvant chemotherapy sensitive tissue (breast cancer)

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