miRTarBase - #MIRT085792


—
pre-miRNA Information
pre-miRNA hsa-mir-548ah   
Genomic Coordinates chr4: 76575551 - 76575626
Description Homo sapiens miR-548ah stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548ah-5p
Sequence 11| AAAAGUGAUUGCAGUGUUUG |30
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 3 4 + 76575563 29233923 MiREDiBase
A-to-I 4 4 + 76575564 29233923 MiREDiBase
A-to-I 13 4 + 76575573 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1249440036 5 dbSNP
rs1208814230 6 dbSNP
rs1327858995 9 dbSNP
rs1034733368 12 dbSNP
rs1334062111 15 dbSNP
rs1442043011 16 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol FMNL2   
Synonyms FHOD2
Description formin like 2
Transcript NM_052905   
Expression
Putative miRNA Targets on FMNL2
3'UTR of FMNL2
(miRNA target sites are highlighted)		 
>FMNL2|NM_052905|3'UTR
   1 ACCTGAGACTGGCCTGCATGAATACAGGGTGTGCGTGAATGAAACTGCCCACATGAACTTTATGTGCTACGATTTAACTG
  81 CAGCCTTGAACACACACAAAAATATTCTTAAGGGCTCAGATTTAGCAAACACGGAAGAATTTTAAAATGAGCTCTCCTTT
 161 CAACCCTTGTTAACAAGTGCCTAAAAATGGAAGTACCTGTTCAGATTAATCAAAGCAATAGGATTTGATTTGATTAGGTA
 241 TCTTTTTACACCAGTATGTTATTTTTAACCAAAATGTAAAGTTCTTATTAAACTCATTACCTGCCATTGTGATTGTCCCA
 321 TCATGGCCCACCTGGTTTCCTGATGTTGTAAATAACATCAATGCATCTGCTGTGGGTCCTTTGCTGAGATGTCTTCGAAG
 401 GAATTTTGTTTTAGCCATATCCATCAACTTTGTATTTTACTTGCAATTTGGAAGAAGGAAAGTCACATGATGAAACTCCT
 481 TTTGTCTATAACCAGGCCCTGGCAAAGTGCAAACAGGATGCAACTGCAGTGGCACAAAGGTCACTCAATCCTTTGTTTCC
 561 AGTTTCACATTCTACTACTTCTGCGCTAGAGAACGATGCTCTGTGAGAGGCATTCACTAGTATGAATGTGGGGATATAGT
 641 GTATAAGACTTATTTGCAGTACTGTGTTCTTCAGCTAGAGGCAGCTTTTTAAATAATGCAAGTGTATTTATTAGCATTAA
 721 AATTAACATCTCAGTAATCAGCATTAGCATTTCTGAGGACCATTATTAATTCTGAGAACAGAAATTGGTGCCTTGCAAGG
 801 AAGTTTACTAGCTCTATCAACAAGCATTCAAGGTTACATCTGCTAGCAGAGTAGTGTTAGGAACCTGGCCTTACTCTCCT
 881 CTGACAATCGCAATTTTTTCTTATTTTTTATAAATTCAAGAAGATACACTTGGCATCGTGTATCGAGGCTAAGTTTTTCA
 961 TGCATTTCCCAGACTACTTATGGAGAATTGCAGTTTAAGTTGCTGAAAAGTATTAACATGGTATTAAGCTTAAATAATAC
1041 GTAATGGGACTAGATGGCCCACTAAGCCACTGTTATTTTCCTTCCTCTCTGGCAGGGCACTTGATCCATTCCAAAGTCAA
1121 AAACTGGACTGAAGCTAAATTTGTACTTTTCATAATATACATTCTGCTTCTGGCTTATCTTCTTGGTACATCAATATATT
1201 AATTGTAAAGTTTATTGTATAGTATTTAACCGCTGAAGTTCCTATTTTATGTTGTGCTTATGTGAACCCCTTGGTGAAGG
1281 TCCCTTTTCCTTGGATGTGTAGTTATATGATCTTTTTAAATGTACAGATATTTTGCTATAAAATCGGTGCAGTTTTTTAT
1361 GGTTTTTACACTTCTCTTTAATTCCCACCTAAGCCTCTGGGTAATATTGTAAATATTGTTTTAAAATGCATCAGCCTATG
1441 CTATACAATCTGAATGTTATTTTAACTTATAGTTTTTTTTAATATATATATTTAACTATAAGGACAGTTTAGGGAACAAG
1521 TTACCTACCACATTTCACTTTAGTGTACCTATTTACAGAAAGATTAAACTGCCACCTGCGGGCACATTCCCATAAATGTG
1601 TACTTTACTTTAAAAAGAACATGCCACGATTTTGTCTTTCTGTGGACTCAACATTCACTTCGATTAAAAATAGCAATTTG
1681 ACCAAGTTGGACTTCCACTACAAAGCAGCTGTTTTCCAAAGTTCAATGCTGACATATATGTATATTAAAATAATTGCCTA
1761 TTTATTAATCTACAAATAGACAACGTTGGCATGTTCTTTTCTGTTTGTCTATTAATGGGCCTGCTTCTTAGCAATATTAG
1841 AATGTTTTATAAAAGCAATTCATGTTACTTTTCTGGTCTTTTCATGGCATATGAGCAAATAATAAACTATTTACACTACT
1921 ATTCTGTAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' guuUGUGACGUUAGUGAAAa 5'
             |||:|    ||||||| 
Target 5' accACATT----TCACTTTa 3'
 1527 - 1542 147.00 -6.70
2 
miRNA  3' guUUGUGACGU-UAGUGAAAa 5'
            |:|| | || :|:||||| 
Target 5' aaAGCAATTCATGTTACTTTt 3'
 1852 - 1872 142.00 -8.90
3 
miRNA  3' guUUGUGACGUUAGUGAAaa 5'
            :|| |  || ||||||  
Target 5' tgGACTCAACATTCACTTcg 3'
 1643 - 1662 134.00 -7.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN22236929 34 COSMIC
COSN28185962 63 COSMIC
COSN30115771 86 COSMIC
COSN30483590 111 COSMIC
COSN1798689 190 COSMIC
COSN20225597 326 COSMIC
COSN26601907 341 COSMIC
COSN21449735 352 COSMIC
COSN6197626 399 COSMIC
COSN28018181 414 COSMIC
COSN6197627 448 COSMIC
COSN27837789 452 COSMIC
COSN1798691 489 COSMIC
COSN26538150 742 COSMIC
COSN19658912 891 COSMIC
COSN28733054 958 COSMIC
COSN31551319 1003 COSMIC
COSN30543529 1174 COSMIC
COSN31547740 1206 COSMIC
COSN23356980 1481 COSMIC
COSN1798693 1490 COSMIC
COSN31556212 1542 COSMIC
COSN31518888 1860 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs774892480 2 dbSNP
rs753100790 4 dbSNP
rs186657614 5 dbSNP
rs890541271 12 dbSNP
rs1272951224 13 dbSNP
rs943162132 15 dbSNP
rs1354437183 16 dbSNP
rs778257804 18 dbSNP
rs1374802774 19 dbSNP
rs760009660 20 dbSNP
rs1359520298 24 dbSNP
rs1446551182 26 dbSNP
rs1038899649 28 dbSNP
rs1191402765 29 dbSNP
rs367975208 31 dbSNP
rs1475499519 32 dbSNP
rs1186892872 33 dbSNP
rs771272626 35 dbSNP
rs201665827 36 dbSNP
rs772480143 36 dbSNP
rs1454988791 37 dbSNP
rs1158824586 38 dbSNP
rs779210090 39 dbSNP
rs979978063 44 dbSNP
rs564160733 48 dbSNP
rs1296879140 49 dbSNP
rs749879179 55 dbSNP
rs1421987574 59 dbSNP
rs1216493959 63 dbSNP
rs745717981 67 dbSNP
rs561390637 70 dbSNP
rs1486012655 71 dbSNP
rs572201418 91 dbSNP
rs938111040 96 dbSNP
rs1000138449 99 dbSNP
rs1031326059 100 dbSNP
rs192688512 110 dbSNP
rs891441569 112 dbSNP
rs1261672417 113 dbSNP
rs1185206401 115 dbSNP
rs945404246 120 dbSNP
rs1385593706 125 dbSNP
rs1013949675 128 dbSNP
rs1315378852 130 dbSNP
rs1024023290 132 dbSNP
rs1339189463 133 dbSNP
rs530340425 133 dbSNP
rs12693429 134 dbSNP
rs1002776856 140 dbSNP
rs1156440726 150 dbSNP
rs1409581442 152 dbSNP
rs1033893065 155 dbSNP
rs904121275 158 dbSNP
rs1456374963 162 dbSNP
rs1370144544 165 dbSNP
rs1188120861 166 dbSNP
rs1400775242 167 dbSNP
rs1475580413 167 dbSNP
rs1262550296 175 dbSNP
rs1191856807 183 dbSNP
rs60853545 188 dbSNP
rs1262927765 195 dbSNP
rs1209636983 197 dbSNP
rs535773355 201 dbSNP
rs1354634912 203 dbSNP
rs1357940030 208 dbSNP
rs1234372585 212 dbSNP
rs1049911125 216 dbSNP
rs1275755561 219 dbSNP
rs889946479 220 dbSNP
rs1326635228 222 dbSNP
rs1322411140 226 dbSNP
rs973655561 228 dbSNP
rs919528398 231 dbSNP
rs1007973960 234 dbSNP
rs1465033502 235 dbSNP
rs1423055401 239 dbSNP
rs950681100 252 dbSNP
rs1376560263 253 dbSNP
rs1019327452 254 dbSNP
rs1281459213 256 dbSNP
rs765112824 259 dbSNP
rs555349661 263 dbSNP
rs1351571600 274 dbSNP
rs987439446 277 dbSNP
rs1457689901 278 dbSNP
rs1255665070 282 dbSNP
rs1218735266 288 dbSNP
rs896865716 289 dbSNP
rs1273887814 291 dbSNP
rs73016134 296 dbSNP
rs775327514 298 dbSNP
rs1332678147 302 dbSNP
rs943503866 303 dbSNP
rs1039260048 308 dbSNP
rs75425753 324 dbSNP
rs1398052698 328 dbSNP
rs952684681 337 dbSNP
rs935844630 343 dbSNP
rs1205434294 344 dbSNP
rs1243582440 346 dbSNP
rs1457133704 349 dbSNP
rs1176470633 354 dbSNP
rs138109208 362 dbSNP
rs891721139 363 dbSNP
rs1236918578 365 dbSNP
rs1470273278 371 dbSNP
rs1437919326 373 dbSNP
rs375280649 376 dbSNP
rs1171486452 380 dbSNP
rs1013896259 381 dbSNP
rs1346655687 383 dbSNP
rs76751361 386 dbSNP
rs1471254215 388 dbSNP
rs992625987 389 dbSNP
rs1374292954 391 dbSNP
rs768653192 393 dbSNP
rs1001316409 397 dbSNP
rs918017841 398 dbSNP
rs967172205 399 dbSNP
rs978140117 400 dbSNP
rs1177758575 404 dbSNP
rs1333559818 406 dbSNP
rs1413032683 424 dbSNP
rs1377529509 425 dbSNP
rs1174455735 429 dbSNP
rs1400076474 445 dbSNP
rs1378793435 451 dbSNP
rs1445011969 455 dbSNP
rs543463253 460 dbSNP
rs1331227739 463 dbSNP
rs1034251660 465 dbSNP
rs963553604 469 dbSNP
rs563239839 472 dbSNP
rs936970159 482 dbSNP
rs143988439 489 dbSNP
rs543353023 490 dbSNP
rs911437605 497 dbSNP
rs1026490266 498 dbSNP
rs951001226 502 dbSNP
rs865939012 505 dbSNP
rs1287884945 506 dbSNP
rs575668394 508 dbSNP
rs562353777 510 dbSNP
rs1282312432 524 dbSNP
rs987428010 525 dbSNP
rs1357374126 531 dbSNP
rs1041168798 533 dbSNP
rs1419316511 535 dbSNP
rs774425480 540 dbSNP
rs1401597970 547 dbSNP
rs1413740720 551 dbSNP
rs775636618 552 dbSNP
rs148252753 556 dbSNP
rs1257582865 557 dbSNP
rs1048088603 568 dbSNP
rs974824811 574 dbSNP
rs926050172 578 dbSNP
rs1265127763 580 dbSNP
rs762143325 581 dbSNP
rs1065266 585 dbSNP
rs1287650489 588 dbSNP
rs1337121331 590 dbSNP
rs913147255 590 dbSNP
rs75998872 592 dbSNP
rs1399678552 595 dbSNP
rs1197659358 596 dbSNP
rs1045407273 600 dbSNP
rs1034274463 605 dbSNP
rs532241497 606 dbSNP
rs905557597 607 dbSNP
rs773565416 617 dbSNP
rs1038083360 621 dbSNP
rs1322207135 625 dbSNP
rs761162056 632 dbSNP
rs766745356 635 dbSNP
rs1170040857 638 dbSNP
rs1169319086 641 dbSNP
rs1476528814 642 dbSNP
rs1014113447 644 dbSNP
rs1186683776 645 dbSNP
rs1488043155 648 dbSNP
rs1244752222 650 dbSNP
rs1215557046 653 dbSNP
rs571432682 654 dbSNP
rs1405044360 655 dbSNP
rs1321796582 659 dbSNP
rs1257288867 662 dbSNP
rs1218124887 664 dbSNP
rs1316071392 669 dbSNP
rs1020109128 681 dbSNP
rs1215366224 686 dbSNP
rs1367421663 697 dbSNP
rs185045831 699 dbSNP
rs1395886000 700 dbSNP
rs754325842 708 dbSNP
rs978571124 710 dbSNP
rs1355719505 711 dbSNP
rs1170780797 712 dbSNP
rs925348722 715 dbSNP
rs1422851018 720 dbSNP
rs528020140 721 dbSNP
rs1277578438 727 dbSNP
rs1454519147 730 dbSNP
rs994957950 731 dbSNP
rs1196615692 735 dbSNP
rs911488562 742 dbSNP
rs944271161 745 dbSNP
rs1205536317 750 dbSNP
rs1041221606 757 dbSNP
rs1301468003 759 dbSNP
rs760047093 760 dbSNP
rs1271736007 761 dbSNP
rs1237002053 762 dbSNP
rs1372103532 764 dbSNP
rs918738204 769 dbSNP
rs1026478956 773 dbSNP
rs1374970197 774 dbSNP
rs1339802422 775 dbSNP
rs1465279613 777 dbSNP
rs929776418 786 dbSNP
rs1048620832 787 dbSNP
rs886672612 794 dbSNP
rs888168852 795 dbSNP
rs1009130536 797 dbSNP
rs1176768306 799 dbSNP
rs1019625797 800 dbSNP
rs964716805 802 dbSNP
rs975152748 803 dbSNP
rs1177874711 809 dbSNP
rs764038898 816 dbSNP
rs755337857 817 dbSNP
rs530881370 821 dbSNP
rs1477142318 824 dbSNP
rs188311898 826 dbSNP
rs1195930046 827 dbSNP
rs1014165828 828 dbSNP
rs1374036296 834 dbSNP
rs756754521 837 dbSNP
rs957478140 850 dbSNP
rs1020148517 853 dbSNP
rs967612099 855 dbSNP
rs1367692270 859 dbSNP
rs1314391193 868 dbSNP
rs988641005 870 dbSNP
rs1359705292 874 dbSNP
rs1425461611 879 dbSNP
rs1156587443 883 dbSNP
rs999996672 886 dbSNP
rs1364345467 890 dbSNP
rs1163907585 891 dbSNP
rs765242532 891 dbSNP
rs1255476421 894 dbSNP
rs1190425593 898 dbSNP
rs1032849566 901 dbSNP
rs10645049 901 dbSNP
rs1261834692 901 dbSNP
rs1353201034 901 dbSNP
rs1358645587 904 dbSNP
rs763515214 905 dbSNP
rs1294560516 911 dbSNP
rs1297594669 919 dbSNP
rs1326873927 922 dbSNP
rs376654739 923 dbSNP
rs751012615 926 dbSNP
rs985445518 927 dbSNP
rs1315737856 928 dbSNP
rs528182429 937 dbSNP
rs1383713455 939 dbSNP
rs555671268 945 dbSNP
rs1018213386 946 dbSNP
rs1415828207 950 dbSNP
rs1456325045 950 dbSNP
rs565792151 950 dbSNP
rs981353544 952 dbSNP
rs927204969 953 dbSNP
rs2463 958 dbSNP
rs918807070 962 dbSNP
rs1434428922 963 dbSNP
rs1449151282 966 dbSNP
rs930144379 974 dbSNP
rs1284752933 975 dbSNP
rs780885741 976 dbSNP
rs984276072 982 dbSNP
rs909641676 984 dbSNP
rs1316677604 991 dbSNP
rs1268061738 993 dbSNP
rs937054188 996 dbSNP
rs1326875160 997 dbSNP
rs1300300617 1000 dbSNP
rs1055495853 1004 dbSNP
rs1491447023 1006 dbSNP
rs895473972 1006 dbSNP
rs1491335581 1007 dbSNP
rs557955405 1009 dbSNP
rs547365295 1011 dbSNP
rs1038478361 1019 dbSNP
rs750042692 1020 dbSNP
rs1042031292 1022 dbSNP
rs1476493441 1027 dbSNP
rs1374042343 1028 dbSNP
rs1198623994 1029 dbSNP
rs1452916869 1033 dbSNP
rs1255445657 1034 dbSNP
rs903068753 1038 dbSNP
rs577827156 1039 dbSNP
rs929749727 1042 dbSNP
rs1047869954 1044 dbSNP
rs1158248501 1046 dbSNP
rs1339637439 1047 dbSNP
rs1032823676 1056 dbSNP
rs886579493 1057 dbSNP
rs1455407367 1059 dbSNP
rs1231851413 1070 dbSNP
rs1372832182 1074 dbSNP
rs1304140721 1086 dbSNP
rs142742974 1088 dbSNP
rs748423218 1090 dbSNP
rs1385586730 1092 dbSNP
rs1019155807 1095 dbSNP
rs1326910757 1108 dbSNP
rs867416149 1109 dbSNP
rs965346559 1111 dbSNP
rs1395344183 1114 dbSNP
rs1433263576 1119 dbSNP
rs1334473113 1121 dbSNP
rs1194876308 1123 dbSNP
rs976745837 1123 dbSNP
rs900760447 1126 dbSNP
rs1183388801 1128 dbSNP
rs951638163 1130 dbSNP
rs996186344 1132 dbSNP
rs1255056887 1135 dbSNP
rs755949521 1152 dbSNP
rs193181602 1156 dbSNP
rs957424084 1159 dbSNP
rs1349865639 1162 dbSNP
rs988922955 1163 dbSNP
rs937106490 1173 dbSNP
rs573623081 1188 dbSNP
rs971197797 1192 dbSNP
rs184613602 1195 dbSNP
rs147385599 1197 dbSNP
rs1336363308 1198 dbSNP
rs916961338 1200 dbSNP
rs1413164383 1203 dbSNP
rs927223628 1206 dbSNP
rs903118453 1208 dbSNP
rs1406470224 1209 dbSNP
rs935915684 1211 dbSNP
rs1470213851 1212 dbSNP
rs1256183862 1216 dbSNP
rs937295364 1219 dbSNP
rs1257719755 1231 dbSNP
rs1215668903 1232 dbSNP
rs1444997768 1233 dbSNP
rs888941411 1236 dbSNP
rs1224261953 1263 dbSNP
rs1351582606 1269 dbSNP
rs560783570 1271 dbSNP
rs1292717044 1276 dbSNP
rs1231742032 1285 dbSNP
rs973745939 1291 dbSNP
rs1245406628 1295 dbSNP
rs139450099 1296 dbSNP
rs545214141 1300 dbSNP
rs1178330733 1319 dbSNP
rs1248670969 1322 dbSNP
rs1430469787 1328 dbSNP
rs1343747566 1329 dbSNP
rs1320926273 1339 dbSNP
rs1421045887 1341 dbSNP
rs1159966439 1342 dbSNP
rs1018321343 1343 dbSNP
rs549731268 1346 dbSNP
rs929655059 1347 dbSNP
rs1162193985 1348 dbSNP
rs1475878778 1353 dbSNP
rs1377092317 1357 dbSNP
rs1046774863 1359 dbSNP
rs890876564 1370 dbSNP
rs1174145111 1371 dbSNP
rs1243631482 1373 dbSNP
rs567641775 1375 dbSNP
rs1216462325 1377 dbSNP
rs944844081 1386 dbSNP
rs868168358 1392 dbSNP
rs900753328 1399 dbSNP
rs565174754 1400 dbSNP
rs901236555 1401 dbSNP
rs1360357855 1408 dbSNP
rs1054448020 1412 dbSNP
rs1431867025 1413 dbSNP
rs998610875 1416 dbSNP
rs1324387347 1429 dbSNP
rs189336139 1435 dbSNP
rs1010261086 1439 dbSNP
rs951745050 1440 dbSNP
rs1169390774 1441 dbSNP
rs1426338260 1445 dbSNP
rs1421452064 1446 dbSNP
rs1370737878 1457 dbSNP
rs1453536608 1462 dbSNP
rs1251072445 1465 dbSNP
rs1195364019 1467 dbSNP
rs1469926758 1467 dbSNP
rs546712964 1468 dbSNP
rs1005792641 1469 dbSNP
rs1306001998 1470 dbSNP
rs550708008 1471 dbSNP
rs1370641293 1472 dbSNP
rs1371145442 1473 dbSNP
rs1459982075 1473 dbSNP
rs570392772 1473 dbSNP
rs991624541 1473 dbSNP
rs1355950282 1474 dbSNP
rs1170630045 1475 dbSNP
rs971504385 1481 dbSNP
rs1307108378 1482 dbSNP
rs971148563 1486 dbSNP
rs1002707188 1488 dbSNP
rs1034619653 1489 dbSNP
rs1176717806 1493 dbSNP
rs1222263839 1493 dbSNP
rs1234828414 1494 dbSNP
rs181952844 1496 dbSNP
rs977516700 1498 dbSNP
rs1265537726 1499 dbSNP
rs1324789160 1500 dbSNP
rs1313319928 1505 dbSNP
rs1198423864 1507 dbSNP
rs958633610 1511 dbSNP
rs974366280 1529 dbSNP
rs1177976108 1533 dbSNP
rs935950925 1535 dbSNP
rs1266815035 1539 dbSNP
rs919860348 1542 dbSNP
rs1413787779 1546 dbSNP
rs1054376908 1547 dbSNP
rs1314512130 1550 dbSNP
rs910430557 1555 dbSNP
rs1363158179 1557 dbSNP
rs1479496418 1580 dbSNP
rs951010804 1581 dbSNP
rs371745292 1582 dbSNP
rs982423570 1583 dbSNP
rs901288672 1586 dbSNP
rs767119677 1587 dbSNP
rs998267873 1590 dbSNP
rs1470197748 1593 dbSNP
rs1483745734 1594 dbSNP
rs912306310 1596 dbSNP
rs531709410 1601 dbSNP
rs533003454 1601 dbSNP
rs780787950 1601 dbSNP
rs943827155 1603 dbSNP
rs1288399285 1604 dbSNP
rs1040530903 1606 dbSNP
rs1463244116 1608 dbSNP
rs922123364 1609 dbSNP
rs1415183187 1612 dbSNP
rs1298360704 1618 dbSNP
rs1383954297 1621 dbSNP
rs1287112014 1623 dbSNP
rs1017203924 1625 dbSNP
rs1389467439 1628 dbSNP
rs530113868 1629 dbSNP
rs1160031712 1635 dbSNP
rs145069571 1638 dbSNP
rs1415964733 1646 dbSNP
rs1013112922 1648 dbSNP
rs1261470740 1649 dbSNP
rs1284580214 1649 dbSNP
rs1203940353 1652 dbSNP
rs1487147847 1658 dbSNP
rs1346702241 1660 dbSNP
rs550214050 1662 dbSNP
rs377567951 1663 dbSNP
rs1331950428 1666 dbSNP
rs1293941396 1668 dbSNP
rs1245059041 1669 dbSNP
rs893396071 1672 dbSNP
rs1309601721 1674 dbSNP
rs1293149709 1676 dbSNP
rs971584045 1677 dbSNP
rs1010233200 1683 dbSNP
rs150511253 1684 dbSNP
rs1461000753 1688 dbSNP
rs1265073934 1689 dbSNP
rs1458579983 1691 dbSNP
rs1372921088 1692 dbSNP
rs1191521633 1693 dbSNP
rs907267980 1704 dbSNP
rs924311391 1708 dbSNP
rs1193540665 1717 dbSNP
rs1274473032 1718 dbSNP
rs1489905321 1718 dbSNP
rs1210113114 1719 dbSNP
rs139934612 1720 dbSNP
rs957063993 1729 dbSNP
rs1224817044 1733 dbSNP
rs1269643362 1734 dbSNP
rs1249220087 1747 dbSNP
rs1480737954 1755 dbSNP
rs1003398092 1759 dbSNP
rs202078152 1759 dbSNP
rs749098969 1759 dbSNP
rs1185840337 1765 dbSNP
rs1302657101 1774 dbSNP
rs1438622143 1785 dbSNP
rs910487628 1785 dbSNP
rs1325588547 1786 dbSNP
rs1387381970 1787 dbSNP
rs1396040899 1790 dbSNP
rs1034450432 1792 dbSNP
rs1166309888 1794 dbSNP
rs1463901095 1797 dbSNP
rs780271903 1802 dbSNP
rs1170782273 1804 dbSNP
rs1453094525 1805 dbSNP
rs1364588837 1808 dbSNP
rs1198993778 1810 dbSNP
rs1422293175 1811 dbSNP
rs1436656521 1817 dbSNP
rs943270878 1822 dbSNP
rs1040211928 1824 dbSNP
rs1342697323 1824 dbSNP
rs1279307130 1827 dbSNP
rs923120259 1833 dbSNP
rs1365634611 1835 dbSNP
rs1349994039 1840 dbSNP
rs1275298156 1842 dbSNP
rs1234068618 1843 dbSNP
rs768585305 1860 dbSNP
rs1335231094 1861 dbSNP
rs1327179040 1862 dbSNP
rs1287625276 1863 dbSNP
rs1371612400 1869 dbSNP
rs1364593936 1872 dbSNP
rs934107993 1878 dbSNP
rs1427872892 1884 dbSNP
rs958758238 1885 dbSNP
rs1312367358 1886 dbSNP
rs995353191 1889 dbSNP
rs1026822970 1890 dbSNP
rs1248391875 1892 dbSNP
rs1256310430 1896 dbSNP
rs1208465956 1897 dbSNP
rs1486494897 1898 dbSNP
rs1279313464 1901 dbSNP
rs1292663428 1903 dbSNP
rs1487987841 1904 dbSNP
rs1215066940 1908 dbSNP
rs551685163 1913 dbSNP
rs1230249962 1915 dbSNP
rs951336041 1915 dbSNP
rs1351370443 1917 dbSNP
rs747077877 1919 dbSNP
rs1486774673 1920 dbSNP
rs1292830636 1922 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 114793.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' guuUGUGACGUUAGUGAAAa 5'
             |||:|    ||||||| 
Target 5' accACAUU----UCACUUUa 3'
 		7 - 22
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000288670.9 | 3UTR | UUACCUACCACAUUUCACUUUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
302 hsa-miR-548ah-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057035 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT060559 CCND1 cyclin D1 2 12
MIRT061211 MED17 mediator complex subunit 17 2 2
MIRT061700 BTG2 BTG anti-proliferation factor 2 2 4
MIRT064457 GPR137B G protein-coupled receptor 137B 2 2
MIRT065680 ACVR1B activin A receptor type 1B 2 6
MIRT068902 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT069414 ZFYVE21 zinc finger FYVE-type containing 21 2 8
MIRT069711 FOXJ3 forkhead box J3 2 2
MIRT071220 FCF1 FCF1, rRNA-processing protein 2 2
MIRT072258 B2M beta-2-microglobulin 2 10
MIRT073631 IGF1R insulin like growth factor 1 receptor 2 4
MIRT077074 KRT10 keratin 10 2 8
MIRT080711 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT081230 MIDN midnolin 2 8
MIRT085792 FMNL2 formin like 2 2 2
MIRT088055 UBXN2A UBX domain protein 2A 2 4
MIRT089219 ACTR2 ARP2 actin related protein 2 homolog 2 6
MIRT090626 PLS1 plastin 1 2 2
MIRT091390 EIF4A2 eukaryotic translation initiation factor 4A2 2 2
MIRT092424 APPL1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 2 2
MIRT094197 THAP6 THAP domain containing 6 2 2
MIRT098283 SMIM13 small integral membrane protein 13 2 6
MIRT099150 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT103209 SP4 Sp4 transcription factor 2 6
MIRT108713 XIAP X-linked inhibitor of apoptosis 2 2
MIRT114051 AKAP11 A-kinase anchoring protein 11 2 12
MIRT135494 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT156020 SIK1 salt inducible kinase 1 2 2
MIRT173035 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT182263 POU2F1 POU class 2 homeobox 1 2 2
MIRT182529 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT184889 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT187295 CLIC4 chloride intracellular channel 4 2 4
MIRT187488 PCBP2 poly(rC) binding protein 2 2 4
MIRT188194 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT188215 RAP1B RAP1B, member of RAS oncogene family 2 2
MIRT192288 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT201087 ZNF805 zinc finger protein 805 2 2
MIRT212617 RBPJ recombination signal binding protein for immunoglobulin kappa J region 2 8
MIRT213196 REST RE1 silencing transcription factor 2 2
MIRT213334 KIAA0232 KIAA0232 2 2
MIRT213444 DCK deoxycytidine kinase 2 4
MIRT220129 CAV1 caveolin 1 2 2
MIRT230191 AKAP17A A-kinase anchoring protein 17A 2 2
MIRT242730 ZNF714 zinc finger protein 714 2 2
MIRT242759 FNBP1L formin binding protein 1 like 2 2
MIRT257297 FOXC1 forkhead box C1 2 2
MIRT258911 LAPTM4B lysosomal protein transmembrane 4 beta 2 4
MIRT260958 SCD stearoyl-CoA desaturase 2 2
MIRT263458 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT284918 NFAT5 nuclear factor of activated T-cells 5 2 6
MIRT291947 TPM4 tropomyosin 4 2 2
MIRT297340 BCL2L11 BCL2 like 11 2 8
MIRT308819 NPNT nephronectin 2 2
MIRT311518 ISOC1 isochorismatase domain containing 1 2 2
MIRT314181 OCLN occludin 2 4
MIRT315706 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 2
MIRT331762 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 4
MIRT338783 STMN1 stathmin 1 2 2
MIRT341459 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT344226 SRSF11 serine and arginine rich splicing factor 11 2 2
MIRT355851 SGMS2 sphingomyelin synthase 2 2 4
MIRT409854 RLIM ring finger protein, LIM domain interacting 2 2
MIRT442758 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT443716 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT444315 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT444387 ZNF623 zinc finger protein 623 2 2
MIRT445543 TBC1D8 TBC1 domain family member 8 2 2
MIRT447791 NUPL2 nucleoporin like 2 2 2
MIRT447963 WDR77 WD repeat domain 77 2 2
MIRT448311 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT448363 TSR1 TSR1, ribosome maturation factor 2 6
MIRT448389 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT448801 GLIS3 GLIS family zinc finger 3 2 2
MIRT450193 TMEM9B TMEM9 domain family member B 2 2
MIRT453365 ZNF3 zinc finger protein 3 2 2
MIRT453579 CRCP CGRP receptor component 2 2
MIRT454815 NEDD9 neural precursor cell expressed, developmentally down-regulated 9 2 2
MIRT455376 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT456971 SPAM1 sperm adhesion molecule 1 2 2
MIRT458297 FUT10 fucosyltransferase 10 2 2
MIRT458872 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT460528 S100A11 S100 calcium binding protein A11 2 4
MIRT462130 AKR7A2 aldo-keto reductase family 7 member A2 2 4
MIRT463268 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT463618 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT465229 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT465831 TMEM64 transmembrane protein 64 2 2
MIRT466460 TFAM transcription factor A, mitochondrial 2 8
MIRT467891 SLC22A23 solute carrier family 22 member 23 2 2
MIRT468847 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT469854 PXK PX domain containing serine/threonine kinase like 2 8
MIRT469885 PURB purine rich element binding protein B 2 4
MIRT470448 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 8
MIRT471867 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT472053 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT472163 NIN ninein 2 4
MIRT474279 LARP1 La ribonucleoprotein domain family member 1 2 6
MIRT474602 KLF6 Kruppel like factor 6 2 2
MIRT475468 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT476648 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT476878 FEM1B fem-1 homolog B 2 2
MIRT476906 FBXL5 F-box and leucine rich repeat protein 5 2 12
MIRT477188 F3 coagulation factor III, tissue factor 2 8
MIRT477291 ERGIC2 ERGIC and golgi 2 2 2
MIRT478410 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT479045 COIL coilin 2 10
MIRT479061 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 8
MIRT479273 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT480523 C11orf30 EMSY, BRCA2 interacting transcriptional repressor 2 10
MIRT480557 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT480781 BMP2 bone morphogenetic protein 2 2 2
MIRT481213 ATXN7L3B ataxin 7 like 3B 2 2
MIRT481341 ATL3 atlastin GTPase 3 2 2
MIRT481800 APEX1 apurinic/apyrimidinic endodeoxyribonuclease 1 2 2
MIRT481934 ANKRD11 ankyrin repeat domain 11 2 12
MIRT481962 ANKH ANKH inorganic pyrophosphate transport regulator 2 8
MIRT484826 ZNFX1 zinc finger NFX1-type containing 1 2 4
MIRT484913 ZFYVE26 zinc finger FYVE-type containing 26 2 4
MIRT485132 RRAS2 RAS related 2 2 6
MIRT485197 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 4
MIRT492016 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT492366 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493120 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT493391 KIAA0513 KIAA0513 2 6
MIRT493668 HBP1 HMG-box transcription factor 1 2 2
MIRT494069 DUSP2 dual specificity phosphatase 2 2 4
MIRT494385 SOLH calpain 15 1 1
MIRT494776 ANKRD33B ankyrin repeat domain 33B 2 10
MIRT496737 TRIM31 tripartite motif containing 31 2 2
MIRT497422 FAM46A family with sequence similarity 46 member A 2 2
MIRT498160 FEM1C fem-1 homolog C 2 8
MIRT498357 ABHD17B abhydrolase domain containing 17B 2 2
MIRT499911 KIAA1191 KIAA1191 2 4
MIRT500764 TMEM127 transmembrane protein 127 2 6
MIRT501461 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501956 MAPRE3 microtubule associated protein RP/EB family member 3 2 8
MIRT502368 GIGYF1 GRB10 interacting GYF protein 1 2 8
MIRT502408 GATA6 GATA binding protein 6 2 8
MIRT503445 GINS4 GINS complex subunit 4 2 4
MIRT503565 MDM2 MDM2 proto-oncogene 2 4
MIRT503614 ZNF780A zinc finger protein 780A 2 2
MIRT503833 TMEM242 transmembrane protein 242 2 4
MIRT504102 C9orf40 chromosome 9 open reading frame 40 2 6
MIRT505495 SRSF2 serine and arginine rich splicing factor 2 2 4
MIRT505741 SEPT2 septin 2 2 4
MIRT505977 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT506229 PFKP phosphofructokinase, platelet 2 8
MIRT506432 NAGK N-acetylglucosamine kinase 2 6
MIRT506455 NACC2 NACC family member 2 2 4
MIRT506515 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 4
MIRT506626 MARCH6 membrane associated ring-CH-type finger 6 2 8
MIRT506677 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT506839 KIF23 kinesin family member 23 2 4
MIRT506866 KIAA1147 KIAA1147 2 2
MIRT507190 FZD9 frizzled class receptor 9 2 6
MIRT507236 FOXK2 forkhead box K2 2 4
MIRT507363 FAM129A family with sequence similarity 129 member A 2 6
MIRT508089 ANKRD52 ankyrin repeat domain 52 2 2
MIRT508230 ZNF850 zinc finger protein 850 2 6
MIRT511090 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 4
MIRT511258 KLHL36 kelch like family member 36 2 6
MIRT512681 ENO4 enolase family member 4 2 2
MIRT512754 CD59 CD59 molecule (CD59 blood group) 2 4
MIRT513471 NARS asparaginyl-tRNA synthetase 2 6
MIRT513903 GRB10 growth factor receptor bound protein 10 2 6
MIRT513985 CEP97 centrosomal protein 97 2 2
MIRT513999 CENPQ centromere protein Q 2 4
MIRT514036 BNIP2 BCL2 interacting protein 2 2 2
MIRT514106 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 6
MIRT515002 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT517025 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT517533 ITM2C integral membrane protein 2C 2 6
MIRT517825 KIAA2018 upstream transcription factor family member 3 2 4
MIRT524333 CRLF3 cytokine receptor like factor 3 2 4
MIRT524700 BTG3 BTG anti-proliferation factor 3 2 8
MIRT525208 ZNF93 zinc finger protein 93 2 2
MIRT527210 XIRP2 xin actin binding repeat containing 2 2 2
MIRT527478 CLEC12B C-type lectin domain family 12 member B 2 4
MIRT527889 SERF1B small EDRK-rich factor 1B 2 2
MIRT529345 SERF1A small EDRK-rich factor 1A 2 2
MIRT529613 H1F0 H1 histone family member 0 2 2
MIRT531822 ZNF264 zinc finger protein 264 2 6
MIRT531843 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT532091 RTTN rotatin 2 2
MIRT533391 U2SURP U2 snRNP associated SURP domain containing 2 6
MIRT533837 TGFBR2 transforming growth factor beta receptor 2 2 6
MIRT533885 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT534006 SUV420H1 lysine methyltransferase 5B 2 2
MIRT534053 STC2 stanniocalcin 2 2 2
MIRT534635 RNASEH1 ribonuclease H1 2 4
MIRT537732 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT537782 EIF4H eukaryotic translation initiation factor 4H 2 6
MIRT538015 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT538717 CAPRIN2 caprin family member 2 2 4
MIRT539719 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT540521 CXCL10 C-X-C motif chemokine ligand 10 2 2
MIRT541290 GLO1 glyoxalase I 2 2
MIRT541747 ZC3HAV1 zinc finger CCCH-type containing, antiviral 1 2 2
MIRT542030 PEX2 peroxisomal biogenesis factor 2 2 2
MIRT542067 SLC25A46 solute carrier family 25 member 46 2 2
MIRT542509 WDR13 WD repeat domain 13 2 2
MIRT542717 RPS15A ribosomal protein S15a 2 2
MIRT542890 KLHL15 kelch like family member 15 2 4
MIRT542953 GDF11 growth differentiation factor 11 2 2
MIRT543588 RPF2 ribosome production factor 2 homolog 2 6
MIRT544312 IFNGR1 interferon gamma receptor 1 2 4
MIRT545143 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT545210 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT546255 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT546294 TMEM200C transmembrane protein 200C 2 4
MIRT546459 SLC5A3 solute carrier family 5 member 3 2 4
MIRT546821 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT546843 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT547089 PLRG1 pleiotropic regulator 1 2 2
MIRT548229 FJX1 four jointed box 1 2 4
MIRT548339 EPHA4 EPH receptor A4 2 2
MIRT548392 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT548464 EGLN3 egl-9 family hypoxia inducible factor 3 2 2
MIRT548861 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT549108 C16orf70 chromosome 16 open reading frame 70 2 4
MIRT549252 ATXN1 ataxin 1 2 2
MIRT549415 ADAR adenosine deaminase, RNA specific 2 2
MIRT549830 LUZP2 leucine zipper protein 2 2 2
MIRT550101 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT550109 TAF6 TATA-box binding protein associated factor 6 2 2
MIRT550242 PVR poliovirus receptor 2 4
MIRT552212 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT552640 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT552693 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT553033 USP48 ubiquitin specific peptidase 48 2 2
MIRT553475 TNKS2 tankyrase 2 2 2
MIRT554302 SIPA1L2 signal induced proliferation associated 1 like 2 2 2
MIRT554330 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT554476 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT554531 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT554562 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 2
MIRT554612 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT554745 RHOC ras homolog family member C 2 2
MIRT554803 RGMB repulsive guidance molecule family member b 2 4
MIRT555000 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT555166 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT555242 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT556282 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT557830 FOXJ2 forkhead box J2 2 2
MIRT558221 EFCAB14 EF-hand calcium binding domain 14 2 4
MIRT558332 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558943 CBX1 chromobox 1 2 2
MIRT558965 CAMLG calcium modulating ligand 2 4
MIRT559440 ARSJ arylsulfatase family member J 2 2
MIRT561378 TXNIP thioredoxin interacting protein 2 2
MIRT561646 RUNX3 runt related transcription factor 3 2 2
MIRT562223 HMGB2 high mobility group box 2 2 2
MIRT562560 CCDC71L coiled-coil domain containing 71 like 2 4
MIRT562973 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT563387 DSPP dentin sialophosphoprotein 2 2
MIRT563439 TRIM27 tripartite motif containing 27 2 2
MIRT565554 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 2
MIRT566879 LRP12 LDL receptor related protein 12 2 2
MIRT567051 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT567121 ITGB1 integrin subunit beta 1 2 2
MIRT567551 FGFR1OP FGFR1 oncogene partner 2 2
MIRT567628 FAM210A family with sequence similarity 210 member A 2 2
MIRT567785 DGAT2 diacylglycerol O-acyltransferase 2 2 2
MIRT567917 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT570955 RBM12B RNA binding motif protein 12B 2 2
MIRT571022 CKAP2 cytoskeleton associated protein 2 2 2
MIRT571221 F2R coagulation factor II thrombin receptor 2 2
MIRT571702 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT571732 RPL17-C18orf32 RPL17-C18orf32 readthrough 2 2
MIRT571862 NKIRAS1 NFKB inhibitor interacting Ras like 1 2 2
MIRT572151 DESI1 desumoylating isopeptidase 1 2 2
MIRT572217 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT573377 LIMA1 LIM domain and actin binding 1 2 2
MIRT573924 SNAP47 synaptosome associated protein 47 2 2
MIRT574720 HAUS8 HAUS augmin like complex subunit 8 2 2
MIRT575857 Rab1 RAB1A, member RAS oncogene family 1 1
MIRT608982 PRKCB protein kinase C beta 2 2
MIRT611007 BRI3BP BRI3 binding protein 2 2
MIRT613680 SH3KBP1 SH3 domain containing kinase binding protein 1 2 2
MIRT615455 FAXC failed axon connections homolog 2 2
MIRT615880 MEMO1 mediator of cell motility 1 2 2
MIRT616444 FAM126B family with sequence similarity 126 member B 2 2
MIRT623529 KCNK10 potassium two pore domain channel subfamily K member 10 2 2
MIRT624425 CBX8 chromobox 8 2 2
MIRT625087 C15orf41 chromosome 15 open reading frame 41 2 2
MIRT634463 PAK6 p21 (RAC1) activated kinase 6 2 2
MIRT640011 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT641801 USP32 ubiquitin specific peptidase 32 2 2
MIRT664802 LIAS lipoic acid synthetase 2 4
MIRT682525 GJD3 gap junction protein delta 3 2 2
MIRT688719 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT693162 THEM4 thioesterase superfamily member 4 2 2
MIRT694572 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT699679 SFT2D2 SFT2 domain containing 2 2 2
MIRT701600 MYPN myopalladin 2 2
MIRT701967 MINK1 misshapen like kinase 1 2 2
MIRT702948 HIPK3 homeodomain interacting protein kinase 3 2 2
MIRT702962 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT709508 RHOH ras homolog family member H 2 2
MIRT725232 PEA15 phosphoprotein enriched in astrocytes 15 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548ah-5p Temozolomide 5394 NSC362856 approved sensitive High Glioma tissue
hsa-miR-548ah-5p Osimertinib 71496458 NSC779217 approved resistant cell line (PC9)
hsa-miR-548ah-5p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-548ah-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-548ah-5p Cetuximab resistant tissue (colorectal carcinoma)

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