miRTarBase - #MIRT087131


—
pre-miRNA Information
pre-miRNA hsa-mir-4534   
Genomic Coordinates chr22: 37988794 - 37988853
Description Homo sapiens miR-4534 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4534
Sequence 36| GGAUGGAGGAGGGGUCU |52
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs890798116 2 dbSNP
rs1382774432 11 dbSNP
rs982883970 15 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CRKL   
Synonyms -
Description CRK like proto-oncogene, adaptor protein
Transcript NM_005207   
Expression
Putative miRNA Targets on CRKL
3'UTR of CRKL
(miRNA target sites are highlighted)		 
>CRKL|NM_005207|3'UTR
   1 TTGCTGTTGCCCTGTTTCCTGCTGCTTTGTTGTTCTGCCTGTCCTAGTCTCCTTTGAAGTGGGAAAGCATTTTCTCTCAT
  81 AGGCAAGTCACACTGCATTGCCGAAGTCCAGCTTTCTGCAGACTGGCAGTCGCACACACATTTGGAATGCACACAGCGGC
 161 TGCCTCCTGATGTTTGTATCATAGTCGTATTGTCAAAGAGTAGCCGATTTTAGAGTTCTTTTGGATCATAAACTGGAAAT
 241 ACTGATGGAAGCACACAAGTGGAGAGAAGTTGACATGGAAAGGGTCTTCCTTCTCATTGCTGCCCGTTTGTACATGGGAC
 321 TGATTCTGTTGTGTTCACCAGAGAAAGCTTGAGGCCATGGCGAGATACTGCATGTTTGCTGTTCCACAAAGCAGTGGCTT
 401 AGCTGCCATCTTGCTTTTCTTTGGACAACAGGAAGTGAACCTTAAGGAAGAGAGAATTCTGTTCTAAAACTCCAAAATCT
 481 GGCTTTTTTTTTTCTTTTGTTTTGGTTTGGTTTTGGAAAACTAATTAATTAGACTTGTGTGGGGGTTTTTTTTTGTTTTG
 561 TTTTGTTTGTTTTGTTTTGTTTTTTTGAGACGGTGTCTCGCTGCATCACCCAGGCTGGAGTGCAGTGGCGCAATCTCGCC
 641 TTCCTGCAGTCTCCGCCTCCTGAGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGACTGCAGGCGCGCACA
 721 CCACGCCCAGCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCATCATGTTGACCAGGCTGGTCTCAAACTCCTGACTT
 801 CAGGTGATCCACCCGCCTTCAGCCTCCCAACGTGCTGGGATTACAGCCGTGAGCCGCCGCGCCTGGCCTAGACTTGTGTG
 881 TTCTAAACAGGTTAAGTAGCAGGTTGGGTTTTTATGATAGTGCAAGGAATGACTCATGCCTCTGAGCTTCTAAACTGAAG
 961 CTGCTGTAACTAAAGGAATCTGAAAAGAACAACCCTGAAGCAGAGGCCTTTATTGTCTTGGTTGCCAGTAGTACCTTGTT
1041 TTGCCATGTAGCAGACAACACACAAAATAATGCAGTTGTGGTGTGCCATGCTATGTGCACAGCCCCTTGGATTACTTTGT
1121 TTTAAAAAGCATCAGAGTTGGGGGTACTTTAGGGAAACCTTTGCTTACCTTGTTTTGCCAGTGATAAGAGCAGTGGGTTG
1201 GAGGGCACTTGGCCAGTTTTCTGTTCAGCTTTTCAGTGAATGTACCCCTTTAAGGTTCAGACTTAAACTTCCTTAAAAAG
1281 TGGCGTTGTTCATAGAATCGTTGGACTCATTAATGAATCGTTCAACTCCACTCACTGAAGCCCAGACCTCCGTGCCCAGG
1361 CCCAATCTCGTCAGGCTGCCAGAGAAAGTTGGTGCTGCTCATACTGGTCTCACAGTCTAAGTAAGTGTCTGTGATGCTCC
1441 CAAGCAAAGGAAATGCAAGCTCTGGAAATTCGTTAATGTATTTGATGTCTTAGTGTTTTAGTGACTAGGGAGACCATTAA
1521 CTAGTTTATCATTAACCACTTATCAGTGTATTGATGTTAAAGCATTTCCCTGTTAGCTAAAAGAGGCCTGTTCATACAAG
1601 CCAACTGGTATATACGTGTGGTTCATCCATCATCTGCTGCACATAGCAGACTAGAATTCTGGGAACCCTGTGCAATTCAG
1681 TCTGCTCTCCCTTGTGGACCCTGGTAAAGAAAAGCCTCAGCTCATAGTGAACACAGCAGACCTAGAAATGTAGCAGCAGC
1761 CTACTGAGTAGCTTTCATTTACTGATCATCTGCTGTGACTGTGGCCCTGTCTGGAGGTTCCTAGGTTTTGAGATTTAGAG
1841 CAATGCATTCTGGAGACAGAACCAGCAGAACAGCCATTTTTCAATTTTTCTTTAAATCAGTATTCCATCAGGCAGATAAC
1921 TGCTGTATTCATGAATCTTGAGAGTGTTCCTGAGACAGAATTAATGGTCATTTGGGAAAACTATCGCCATGGCTTCCCAT
2001 CTGTGGTTTTCCTCTAAAAGCCTTGGAGATTAGCCCTTCCTTGCCAGTGAGAACGGTGACCGCCTCCTGCTCTGCACGGT
2081 CTGCGGCAGTTGCCGCTTCTGGTTAGGTGTGTCAGGTTGGCTTATTTTGGGTTCAGGCCTGGCGTAGCACCCACAAGTGG
2161 CAGACATATCACAAGAGTCCCCAGACTCTGCCTAGAAACAGTGTTTGCCCTTTGGCCAGTGACGTGGTTCATCCCGGCCC
2241 ATGTTGAGCCATGAGTGGAGTTTCCAACAGAGGGAGGAATGTGTGCCTTGTTCAAGGAGGGCACGACCCTTAGGCCTTTT
2321 TCAACCAGATTTAGCTGAAGGGCTTGACACCTTTGAATTACAGCAGTTGACTCAGAGTGCAAGAAGTCTGGCCATTTTGG
2401 AAAGCAAGGTTTCCTTTCAGCCCTGTCTACTGACCAATACCCCGACTCACCTTGTGTGGCGCACTTCAGAATCAGATATA
2481 CCTAGAGTATACCTGTGGTTTGGTTTTATAATTAATCAGCTCGTTACTTCAGCCCATGAAAATGGCATCCAGGGCTGCCA
2561 GGAGATTCAGAGCTCAAAACAAGGCGAGCTTGAGTTCTGCACTCCAGATATGTGCCAAAACTAGTAAAACTTAACGGACT
2641 TACAACCTTGTCAGTTTTTTTAATGAGGCAGGGATACTCTGTTTTTCACACTAAACATATGAATGCAGCACTGCTGCCTC
2721 AGCTCAGCTTCGTGCCTGGGTTCCCCACTGGTCTGGGAAGACTGTTGTGCTCCATAGAGCAGTGCACATCTGACCCAGAG
2801 GGTGGGTGTTCATAACTGCTACTTGCTCTGCTCTACCATGTTTAAAGAAATATTTGGATGTTAAATTAACTCACTATGGT
2881 TTTTCACCTGGGAAGGAAACAAATTACGTACTAGAGGGCATTGACTGGTTAAAAACTTGTGTATCCCGGGAAGGACCTGC
2961 GGTACAGGAGTCAGCCATGTCTGTGCTGTGTGGAACCACCTGATGACATGGTTAACGAGGAAGACGATGTGTTGACCGGC
3041 TGCCGTTTGAGGACTTTGGTCACCCAGACTAGACACCTTCTGTGCTCATGTTTGGAAAGCTGAAAGGGAAGGACAGCTGT
3121 GCCCTCCTGGGAGCTCATGTGTCCCTGGCGCTGTGCTAGCTTTCCTTTACAGCTGTTTACAGACAAGGCAGGCCTGAGGC
3201 AGATGGCCACTGCTCTTGTGATGTTTGCTCAGAGGAATATGAACATTTTATTTTTGAAAAGGGATGATGTGGTTTTTTGC
3281 CAGGTGTTTATAATTAATCCTTTAATATTATGGTTATTAACCTCTTAAACATGAATGAATTCTTGATTGTTTTAACACAG
3361 TACCTAAGACTAATGCTTTCTGTGGACACCACTGAGCTCTGCCTCAACTCCACCCTCTGCGACCGGAGGACTATGCCCCT
3441 AGTAACTGCTGTCGGTGTGGACGCTGTGCTGGTTCTGTTTTCTAAAGGAGCAGAAGGACAGGTCTCTGAGACAGGATCGT
3521 TGTCCCTACAGGAGGAACAGTGGCCTTGCTTCTTAGACGGTCTTCACTGTGTGTTTTAAAACAACAACAACAACAACAAC
3601 AACAACATAAAACTCTTTTGACCTGTAACTTAAAGATCATAAACTTCAGGCAATAATATTTTCTGTGTAAGCTTTTAAAA
3681 TTATTTTTGGGGATCATAGCTTGTTTTATTTTGTGCTATAAAATTAACAGTATTAAATGACTTATATTCTTAGAATACAT
3761 CGAGTGTCTTTTCTTAACAGATTAGTGCCTTTTTATTTTTGTATTCCGTTTTACGTTACTGGTCCCAGCATCAAAACCCT
3841 TGTTTCCATGGCCTGTTTGTATATTGTCTCAATAAAACTTGCATCAGCCGGTGGTGGCGGCAGCAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ucUGGGGAGGAGGUAGg 5'
            |:|  | :|||||| 
Target 5' aaATCAGTATTCCATCa 3'
 1894 - 1910 131.00 -11.00
2 
miRNA  3' ucUGGGGA-GGAGGUAgg 5'
            ||||:| ::|||||  
Target 5' aaACCCTTGTTTCCATgg 3'
 3834 - 3851 123.00 -13.00
3 
miRNA  3' ucuggggAGGAGGUAgg 5'
                 | ||||||  
Target 5' actgttgTGCTCCATag 3'
 2761 - 2777 122.00 -8.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30152205 14 COSMIC
COSN26565212 62 COSMIC
COSN30162707 75 COSMIC
COSN30494465 77 COSMIC
COSN25180772 133 COSMIC
COSN31575748 136 COSMIC
COSN30511189 175 COSMIC
COSN31570583 207 COSMIC
COSN30137283 217 COSMIC
COSN1259459 253 COSMIC
COSN20117162 494 COSMIC
COSN1259460 495 COSMIC
COSN9161964 546 COSMIC
COSN29372788 715 COSMIC
COSN31961946 988 COSMIC
COSN17075706 1201 COSMIC
COSN21492652 1415 COSMIC
COSN22448442 1554 COSMIC
COSN21660247 1584 COSMIC
COSN31562665 2493 COSMIC
COSN22588846 2632 COSMIC
COSN31563154 2638 COSMIC
COSN31577194 2698 COSMIC
COSN17337516 2754 COSMIC
COSN31548132 2827 COSMIC
COSN1259461 3100 COSMIC
COSN28813562 3188 COSMIC
COSN1895149 3284 COSMIC
COSN31546984 3371 COSMIC
COSN32064240 3455 COSMIC
COSN8346385 3519 COSMIC
COSN23713815 3580 COSMIC
COSN20117167 3606 COSMIC
COSN20117166 3608 COSMIC
COSN31579223 3666 COSMIC
COSN31538039 3763 COSMIC
COSN26171823 3838 COSMIC
COSN26170622 3858 COSMIC
rs117003805 1714 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs993387735 2 dbSNP
rs1463700584 4 dbSNP
rs1327696332 7 dbSNP
rs1035280926 10 dbSNP
rs1395013800 13 dbSNP
rs1385985046 18 dbSNP
rs1299192111 19 dbSNP
rs754239104 22 dbSNP
rs1229704391 23 dbSNP
rs763362875 26 dbSNP
rs759848266 36 dbSNP
rs373218389 37 dbSNP
rs765462541 42 dbSNP
rs752850306 49 dbSNP
rs758615647 51 dbSNP
rs962435561 60 dbSNP
rs973515333 81 dbSNP
rs1439116826 82 dbSNP
rs959738886 86 dbSNP
rs560990413 93 dbSNP
rs769177194 95 dbSNP
rs1237242957 103 dbSNP
rs1437405635 105 dbSNP
rs920559358 107 dbSNP
rs747678003 118 dbSNP
rs969942007 121 dbSNP
rs202127561 131 dbSNP
rs878948440 132 dbSNP
rs1287960932 133 dbSNP
rs1208427278 138 dbSNP
rs979599831 139 dbSNP
rs1304052915 140 dbSNP
rs911122423 149 dbSNP
rs943995115 159 dbSNP
rs771582414 164 dbSNP
rs1324767763 168 dbSNP
rs1398525056 173 dbSNP
rs530023569 174 dbSNP
rs549067426 178 dbSNP
rs891668341 182 dbSNP
rs772959264 187 dbSNP
rs566056236 188 dbSNP
rs1040176667 197 dbSNP
rs1260707544 201 dbSNP
rs1176078449 206 dbSNP
rs899893281 207 dbSNP
rs748417301 219 dbSNP
rs1376200013 223 dbSNP
rs1042821625 235 dbSNP
rs35335239 235 dbSNP
rs535066674 244 dbSNP
rs1428793048 245 dbSNP
rs1264876687 249 dbSNP
rs1001175294 256 dbSNP
rs1034001863 258 dbSNP
rs760366910 262 dbSNP
rs1232982264 270 dbSNP
rs766255001 271 dbSNP
rs1014542916 272 dbSNP
rs1250868289 275 dbSNP
rs737894 276 dbSNP
rs962244774 278 dbSNP
rs547902233 280 dbSNP
rs753116903 282 dbSNP
rs1342059682 284 dbSNP
rs1356534568 296 dbSNP
rs1195913893 297 dbSNP
rs1027758624 298 dbSNP
rs1396369436 303 dbSNP
rs1166884063 306 dbSNP
rs1462039018 311 dbSNP
rs1425079531 314 dbSNP
rs571806225 315 dbSNP
rs1258021453 316 dbSNP
rs545959252 316 dbSNP
rs537609450 319 dbSNP
rs189640104 321 dbSNP
rs1253174456 329 dbSNP
rs1548410 331 dbSNP
rs978924259 332 dbSNP
rs1196450712 339 dbSNP
rs1374758687 340 dbSNP
rs1232919604 341 dbSNP
rs1032470801 351 dbSNP
rs1475716627 358 dbSNP
rs956895996 362 dbSNP
rs17212305 363 dbSNP
rs114248326 370 dbSNP
rs944308625 373 dbSNP
rs1328256050 374 dbSNP
rs1401886230 381 dbSNP
rs572500671 382 dbSNP
rs1162143268 384 dbSNP
rs12628354 387 dbSNP
rs1391710532 391 dbSNP
rs1418114620 395 dbSNP
rs913023853 398 dbSNP
rs1299605606 402 dbSNP
rs1328528774 407 dbSNP
rs1468418925 409 dbSNP
rs945916396 411 dbSNP
rs533878900 415 dbSNP
rs1458994852 418 dbSNP
rs183405299 419 dbSNP
rs1213117037 429 dbSNP
rs937120875 438 dbSNP
rs1292279844 449 dbSNP
rs1055381400 450 dbSNP
rs1222222599 451 dbSNP
rs1350417371 455 dbSNP
rs1234575530 464 dbSNP
rs1280463588 465 dbSNP
rs1242981003 471 dbSNP
rs1265711250 472 dbSNP
rs1369388224 474 dbSNP
rs895488034 475 dbSNP
rs1439501351 483 dbSNP
rs1383995720 484 dbSNP
rs1398550189 484 dbSNP
rs200139060 484 dbSNP
rs398081677 484 dbSNP
rs60913011 484 dbSNP
rs908376727 491 dbSNP
rs397819599 494 dbSNP
rs200621487 495 dbSNP
rs939884683 495 dbSNP
rs1193154735 498 dbSNP
rs1447305489 500 dbSNP
rs1014887127 501 dbSNP
rs1192857067 504 dbSNP
rs1421383889 505 dbSNP
rs867625059 516 dbSNP
rs1056958276 518 dbSNP
rs1416283591 522 dbSNP
rs895713102 522 dbSNP
rs558215893 523 dbSNP
rs1303328535 535 dbSNP
rs575011073 538 dbSNP
rs994996415 539 dbSNP
rs1369312030 540 dbSNP
rs1367729319 541 dbSNP
rs1276053848 543 dbSNP
rs1428270276 544 dbSNP
rs1421278031 546 dbSNP
rs544048902 546 dbSNP
rs904188858 546 dbSNP
rs1373334205 547 dbSNP
rs1031456549 550 dbSNP
rs1184834341 551 dbSNP
rs59011694 551 dbSNP
rs1019809338 552 dbSNP
rs1475247091 552 dbSNP
rs529888353 556 dbSNP
rs1291956600 557 dbSNP
rs1007685542 561 dbSNP
rs1212248445 562 dbSNP
rs368709446 562 dbSNP
rs572061085 562 dbSNP
rs1018919372 564 dbSNP
rs187614589 566 dbSNP
rs567863750 566 dbSNP
rs976072908 566 dbSNP
rs977047184 570 dbSNP
rs913167982 571 dbSNP
rs1234634327 580 dbSNP
rs1448732957 580 dbSNP
rs1360822482 582 dbSNP
rs1409467343 590 dbSNP
rs1312844196 591 dbSNP
rs879302997 591 dbSNP
rs190588920 592 dbSNP
rs1474318936 596 dbSNP
rs1242176940 598 dbSNP
rs183479700 600 dbSNP
rs1231660991 601 dbSNP
rs1204375470 605 dbSNP
rs925823715 610 dbSNP
rs937089856 616 dbSNP
rs1261004828 622 dbSNP
rs1220114232 623 dbSNP
rs984156013 625 dbSNP
rs1292494273 630 dbSNP
rs188333956 631 dbSNP
rs553642758 633 dbSNP
rs571739083 634 dbSNP
rs1441341648 636 dbSNP
rs1036460553 638 dbSNP
rs193003105 639 dbSNP
rs751862979 645 dbSNP
rs199836325 650 dbSNP
rs948623120 655 dbSNP
rs184656524 656 dbSNP
rs1177171370 658 dbSNP
rs889288385 661 dbSNP
rs904179834 665 dbSNP
rs1420743501 668 dbSNP
rs1158381606 669 dbSNP
rs1358976955 672 dbSNP
rs1007617008 673 dbSNP
rs1417182128 683 dbSNP
rs1303876441 686 dbSNP
rs567840743 694 dbSNP
rs1393786791 696 dbSNP
rs1308768929 708 dbSNP
rs1223191855 709 dbSNP
rs1019055157 714 dbSNP
rs536495152 715 dbSNP
rs1239208163 716 dbSNP
rs1283662434 717 dbSNP
rs1052789936 721 dbSNP
rs150480292 724 dbSNP
rs1009553159 725 dbSNP
rs1021402735 726 dbSNP
rs1255273332 731 dbSNP
rs1440892919 741 dbSNP
rs868823505 750 dbSNP
rs1483007683 751 dbSNP
rs1452036060 757 dbSNP
rs566860260 758 dbSNP
rs1210086761 760 dbSNP
rs1489242862 764 dbSNP
rs1258780104 770 dbSNP
rs1215618753 778 dbSNP
rs774386531 781 dbSNP
rs1354392626 788 dbSNP
rs138659879 791 dbSNP
rs377709552 791 dbSNP
rs1231910241 793 dbSNP
rs1370388717 795 dbSNP
rs978689840 796 dbSNP
rs1302015773 802 dbSNP
rs1032772245 811 dbSNP
rs1388796820 812 dbSNP
rs891525154 815 dbSNP
rs538214183 816 dbSNP
rs1420706420 831 dbSNP
rs1008661891 832 dbSNP
rs757554478 833 dbSNP
rs558152517 836 dbSNP
rs916987677 839 dbSNP
rs1178204959 845 dbSNP
rs574948297 849 dbSNP
rs949866428 850 dbSNP
rs1488498393 853 dbSNP
rs1378862943 855 dbSNP
rs971747057 856 dbSNP
rs570361391 857 dbSNP
rs554414375 860 dbSNP
rs370855350 861 dbSNP
rs952723146 862 dbSNP
rs1235511941 863 dbSNP
rs1306043614 877 dbSNP
rs1295128425 884 dbSNP
rs750800364 895 dbSNP
rs9625171 900 dbSNP
rs1342798253 904 dbSNP
rs908562732 907 dbSNP
rs1299355154 915 dbSNP
rs57573660 917 dbSNP
rs1467142976 918 dbSNP
rs943538774 924 dbSNP
rs1040967808 926 dbSNP
rs1169561935 927 dbSNP
rs917085502 928 dbSNP
rs1445610432 932 dbSNP
rs1185492516 943 dbSNP
rs1306561689 952 dbSNP
rs1441837760 961 dbSNP
rs1256761057 962 dbSNP
rs1337565799 964 dbSNP
rs1257449897 966 dbSNP
rs761951740 967 dbSNP
rs377011515 976 dbSNP
rs1320227571 978 dbSNP
rs1372918894 991 dbSNP
rs532467614 993 dbSNP
rs1341383171 994 dbSNP
rs948592301 1000 dbSNP
rs1390131756 1008 dbSNP
rs1393725276 1010 dbSNP
rs1330070298 1019 dbSNP
rs980026883 1029 dbSNP
rs1425322279 1034 dbSNP
rs925841084 1036 dbSNP
rs935919866 1045 dbSNP
rs1310332526 1057 dbSNP
rs1368787010 1060 dbSNP
rs1189561494 1066 dbSNP
rs1435984652 1073 dbSNP
rs1237690189 1078 dbSNP
rs545372340 1080 dbSNP
rs1206485522 1082 dbSNP
rs1260098386 1083 dbSNP
rs1458220560 1086 dbSNP
rs565285662 1088 dbSNP
rs901914571 1090 dbSNP
rs1052740300 1091 dbSNP
rs530970637 1094 dbSNP
rs1357536501 1103 dbSNP
rs1010099940 1107 dbSNP
rs1236574922 1115 dbSNP
rs11913242 1125 dbSNP
rs1286273132 1129 dbSNP
rs1237592597 1139 dbSNP
rs1376775033 1141 dbSNP
rs1479242004 1147 dbSNP
rs186924008 1151 dbSNP
rs1446867765 1154 dbSNP
rs891471065 1171 dbSNP
rs780568915 1172 dbSNP
rs1404340341 1178 dbSNP
rs747624627 1181 dbSNP
rs1425133380 1186 dbSNP
rs1164748728 1187 dbSNP
rs1040562598 1189 dbSNP
rs73392523 1196 dbSNP
rs1179111198 1210 dbSNP
rs1441625228 1236 dbSNP
rs1251178555 1237 dbSNP
rs1000039785 1238 dbSNP
rs1032907980 1252 dbSNP
rs530300574 1256 dbSNP
rs138343678 1261 dbSNP
rs991268483 1263 dbSNP
rs1292523311 1284 dbSNP
rs1203750370 1285 dbSNP
rs777279089 1285 dbSNP
rs763897430 1286 dbSNP
rs1028508624 1289 dbSNP
rs888667303 1292 dbSNP
rs971166297 1293 dbSNP
rs1005765955 1300 dbSNP
rs1272548826 1300 dbSNP
rs566796996 1301 dbSNP
rs1015506722 1321 dbSNP
rs972225371 1326 dbSNP
rs1417643615 1331 dbSNP
rs9613388 1341 dbSNP
rs770494981 1352 dbSNP
rs1421391384 1359 dbSNP
rs558089316 1362 dbSNP
rs985019646 1366 dbSNP
rs970187632 1370 dbSNP
rs576482420 1371 dbSNP
rs1488171315 1375 dbSNP
rs1264301137 1385 dbSNP
rs1256454877 1387 dbSNP
rs568510220 1390 dbSNP
rs149555262 1401 dbSNP
rs191277182 1405 dbSNP
rs1246514900 1406 dbSNP
rs1218111849 1407 dbSNP
rs1345032301 1411 dbSNP
rs370284592 1414 dbSNP
rs555511198 1417 dbSNP
rs1339622302 1418 dbSNP
rs1487677541 1418 dbSNP
rs935866720 1420 dbSNP
rs1040539139 1422 dbSNP
rs1175523726 1423 dbSNP
rs902049313 1430 dbSNP
rs1167895325 1432 dbSNP
rs867971486 1435 dbSNP
rs1168842447 1439 dbSNP
rs945442142 1440 dbSNP
rs1424833536 1441 dbSNP
rs1196289760 1442 dbSNP
rs944383932 1456 dbSNP
rs1237424167 1464 dbSNP
rs764645414 1470 dbSNP
rs903838699 1472 dbSNP
rs533959023 1473 dbSNP
rs769818290 1478 dbSNP
rs554009915 1485 dbSNP
rs577165732 1492 dbSNP
rs1339730250 1500 dbSNP
rs1055076931 1503 dbSNP
rs894387350 1504 dbSNP
rs775612009 1508 dbSNP
rs1013285839 1510 dbSNP
rs1050316803 1511 dbSNP
rs375222775 1514 dbSNP
rs762925828 1516 dbSNP
rs1229117494 1517 dbSNP
rs993234184 1527 dbSNP
rs562821285 1541 dbSNP
rs144243028 1544 dbSNP
rs1422438495 1549 dbSNP
rs1413472728 1551 dbSNP
rs1219233460 1563 dbSNP
rs1474048115 1577 dbSNP
rs1238743622 1578 dbSNP
rs1014187468 1595 dbSNP
rs751591534 1596 dbSNP
rs1258324814 1598 dbSNP
rs762033843 1605 dbSNP
rs1319739819 1612 dbSNP
rs970515630 1616 dbSNP
rs910254485 1617 dbSNP
rs964956585 1625 dbSNP
rs976745143 1626 dbSNP
rs1381244183 1628 dbSNP
rs1307242989 1637 dbSNP
rs1446143600 1639 dbSNP
rs1472800969 1640 dbSNP
rs1033257776 1641 dbSNP
rs1456537226 1643 dbSNP
rs1349710184 1647 dbSNP
rs957225698 1651 dbSNP
rs57484744 1652 dbSNP
rs1411162098 1656 dbSNP
rs375244998 1661 dbSNP
rs1238214615 1667 dbSNP
rs1421336809 1674 dbSNP
rs913176906 1676 dbSNP
rs1487290042 1687 dbSNP
rs965969131 1688 dbSNP
rs780669705 1690 dbSNP
rs945553353 1692 dbSNP
rs1042583917 1696 dbSNP
rs976124723 1701 dbSNP
rs561400042 1702 dbSNP
rs1283798144 1704 dbSNP
rs1359615312 1707 dbSNP
rs117003805 1714 dbSNP
rs1055044472 1716 dbSNP
rs1377771690 1724 dbSNP
rs895151250 1725 dbSNP
rs750745536 1728 dbSNP
rs564770745 1736 dbSNP
rs865884949 1739 dbSNP
rs1367167341 1749 dbSNP
rs1294545851 1754 dbSNP
rs910043762 1764 dbSNP
rs1358955250 1765 dbSNP
rs1158610281 1775 dbSNP
rs369234111 1778 dbSNP
rs1448848706 1788 dbSNP
rs1420792009 1801 dbSNP
rs1046071247 1806 dbSNP
rs1160646568 1808 dbSNP
rs1431148167 1809 dbSNP
rs941559239 1814 dbSNP
rs1266244080 1822 dbSNP
rs1377227288 1841 dbSNP
rs1191342173 1842 dbSNP
rs1490788339 1846 dbSNP
rs937829045 1848 dbSNP
rs907013951 1850 dbSNP
rs1260704900 1851 dbSNP
rs993720673 1854 dbSNP
rs1287213320 1856 dbSNP
rs1353363582 1859 dbSNP
rs780517938 1860 dbSNP
rs897384643 1865 dbSNP
rs184989297 1866 dbSNP
rs1302250763 1869 dbSNP
rs112216359 1870 dbSNP
rs1338938895 1882 dbSNP
rs1046107870 1885 dbSNP
rs368777340 1896 dbSNP
rs951770677 1896 dbSNP
rs1401189892 1903 dbSNP
rs754429501 1908 dbSNP
rs1301541074 1909 dbSNP
rs1464105846 1924 dbSNP
rs905905244 1925 dbSNP
rs1006014765 1926 dbSNP
rs1186195909 1931 dbSNP
rs1192662862 1936 dbSNP
rs1488610616 1939 dbSNP
rs1002017741 1945 dbSNP
rs1441196517 1946 dbSNP
rs1482987174 1959 dbSNP
rs1256618539 1982 dbSNP
rs532613829 1986 dbSNP
rs552431165 1987 dbSNP
rs1010051538 1988 dbSNP
rs1020141704 1990 dbSNP
rs1219647216 1994 dbSNP
rs964741331 2000 dbSNP
rs976027447 2002 dbSNP
rs921592058 2004 dbSNP
rs976337040 2016 dbSNP
rs923498305 2030 dbSNP
rs1302884211 2038 dbSNP
rs1470789401 2039 dbSNP
rs1397659231 2048 dbSNP
rs967015748 2054 dbSNP
rs372052771 2055 dbSNP
rs1437520329 2056 dbSNP
rs189274432 2062 dbSNP
rs925491455 2063 dbSNP
rs936717110 2075 dbSNP
rs777271857 2078 dbSNP
rs1037129479 2079 dbSNP
rs1169613040 2082 dbSNP
rs916550341 2082 dbSNP
rs1456453611 2085 dbSNP
rs1257667748 2086 dbSNP
rs1403954836 2094 dbSNP
rs116709245 2095 dbSNP
rs1310170406 2096 dbSNP
rs3171744 2097 dbSNP
rs1341586658 2114 dbSNP
rs568098676 2115 dbSNP
rs1376709833 2123 dbSNP
rs1046418027 2132 dbSNP
rs907103655 2139 dbSNP
rs929275841 2140 dbSNP
rs905845998 2142 dbSNP
rs575162167 2145 dbSNP
rs887612388 2155 dbSNP
rs553946602 2165 dbSNP
rs781624578 2170 dbSNP
rs544163986 2172 dbSNP
rs893196171 2175 dbSNP
rs1010332916 2193 dbSNP
rs1020089504 2195 dbSNP
rs1237587709 2196 dbSNP
rs1437932357 2196 dbSNP
rs1179549369 2198 dbSNP
rs539676517 2200 dbSNP
rs376149893 2201 dbSNP
rs1209601049 2210 dbSNP
rs1357426483 2215 dbSNP
rs1238560319 2224 dbSNP
rs1294594633 2224 dbSNP
rs997577316 2225 dbSNP
rs997833498 2231 dbSNP
rs139100081 2234 dbSNP
rs533624313 2236 dbSNP
rs1337161985 2237 dbSNP
rs1437657900 2243 dbSNP
rs746519194 2244 dbSNP
rs770663498 2245 dbSNP
rs1200709485 2247 dbSNP
rs1378176868 2248 dbSNP
rs1477677092 2252 dbSNP
rs1165414002 2261 dbSNP
rs1043235 2268 dbSNP
rs561130450 2275 dbSNP
rs1015892516 2277 dbSNP
rs574836156 2284 dbSNP
rs971830077 2297 dbSNP
rs990839609 2306 dbSNP
rs1452580622 2311 dbSNP
rs34507581 2313 dbSNP
rs916646869 2314 dbSNP
rs143115509 2316 dbSNP
rs181747193 2325 dbSNP
rs918749571 2326 dbSNP
rs117779512 2329 dbSNP
rs1284774141 2332 dbSNP
rs1223842851 2338 dbSNP
rs1352128131 2343 dbSNP
rs1272747569 2345 dbSNP
rs918636951 2351 dbSNP
rs1304696078 2352 dbSNP
rs185457677 2362 dbSNP
rs1398145159 2363 dbSNP
rs1359808264 2366 dbSNP
rs1318819569 2374 dbSNP
rs1390067606 2374 dbSNP
rs112867627 2381 dbSNP
rs1423104086 2395 dbSNP
rs887582814 2400 dbSNP
rs775561225 2406 dbSNP
rs563167293 2408 dbSNP
rs1038914103 2413 dbSNP
rs557582988 2414 dbSNP
rs937604634 2423 dbSNP
rs1488284859 2426 dbSNP
rs777691656 2430 dbSNP
rs577414383 2441 dbSNP
rs900241854 2444 dbSNP
rs762877950 2445 dbSNP
rs1275864192 2455 dbSNP
rs1030369190 2459 dbSNP
rs1323799716 2461 dbSNP
rs548125656 2462 dbSNP
rs1216581732 2475 dbSNP
rs902182842 2478 dbSNP
rs1270731096 2480 dbSNP
rs1432750452 2483 dbSNP
rs1211227863 2486 dbSNP
rs1333559831 2493 dbSNP
rs768487862 2495 dbSNP
rs1408562295 2496 dbSNP
rs1032572980 2509 dbSNP
rs774439923 2520 dbSNP
rs1477715292 2524 dbSNP
rs567951291 2534 dbSNP
rs533820399 2540 dbSNP
rs1472076783 2562 dbSNP
rs761830033 2562 dbSNP
rs946108445 2566 dbSNP
rs1041856616 2567 dbSNP
rs1461330714 2569 dbSNP
rs901659858 2586 dbSNP
rs990936427 2587 dbSNP
rs1317092392 2589 dbSNP
rs997381886 2595 dbSNP
rs1478870721 2601 dbSNP
rs34881868 2604 dbSNP
rs1029260099 2605 dbSNP
rs547496077 2607 dbSNP
rs1043242 2611 dbSNP
rs1385002899 2618 dbSNP
rs868039291 2622 dbSNP
rs1006097988 2623 dbSNP
rs918549148 2636 dbSNP
rs189984591 2637 dbSNP
rs117644779 2640 dbSNP
rs1024752644 2644 dbSNP
rs1184678408 2651 dbSNP
rs970904166 2655 dbSNP
rs981607242 2671 dbSNP
rs1176450631 2673 dbSNP
rs927460273 2677 dbSNP
rs1271197060 2680 dbSNP
rs909114658 2680 dbSNP
rs937568141 2686 dbSNP
rs990438149 2690 dbSNP
rs914565896 2691 dbSNP
rs1319645267 2695 dbSNP
rs58561717 2698 dbSNP
rs901903065 2701 dbSNP
rs1361740329 2710 dbSNP
rs1038883331 2713 dbSNP
rs546381663 2715 dbSNP
rs1446404964 2721 dbSNP
rs921790436 2726 dbSNP
rs933028735 2727 dbSNP
rs1434767149 2728 dbSNP
rs1051533621 2732 dbSNP
rs140499593 2733 dbSNP
rs555674963 2738 dbSNP
rs1053415205 2741 dbSNP
rs1213368896 2751 dbSNP
rs574720057 2751 dbSNP
rs894055289 2754 dbSNP
rs1250817137 2768 dbSNP
rs1178512288 2773 dbSNP
rs1012494247 2775 dbSNP
rs993103020 2783 dbSNP
rs1355448082 2784 dbSNP
rs1024187097 2786 dbSNP
rs11544581 2788 dbSNP
rs970928094 2795 dbSNP
rs1490818309 2800 dbSNP
rs1219945179 2802 dbSNP
rs1265295175 2803 dbSNP
rs568006410 2806 dbSNP
rs1356379721 2807 dbSNP
rs1488593689 2809 dbSNP
rs1192787609 2810 dbSNP
rs1309462659 2812 dbSNP
rs1025077012 2817 dbSNP
rs540264086 2819 dbSNP
rs1407371341 2827 dbSNP
rs1274593661 2831 dbSNP
rs1426743449 2832 dbSNP
rs1025746731 2833 dbSNP
rs754158311 2835 dbSNP
rs1189958522 2837 dbSNP
rs1363835363 2839 dbSNP
rs951470301 2840 dbSNP
rs755456196 2841 dbSNP
rs1457763435 2854 dbSNP
rs34237673 2856 dbSNP
rs1162025391 2873 dbSNP
rs527277305 2875 dbSNP
rs1199859990 2880 dbSNP
rs1481261543 2881 dbSNP
rs868173144 2886 dbSNP
rs1204439345 2888 dbSNP
rs35778959 2890 dbSNP
rs1420865101 2897 dbSNP
rs984112676 2900 dbSNP
rs909922538 2901 dbSNP
rs1397252822 2902 dbSNP
rs142185959 2905 dbSNP
rs1225754686 2908 dbSNP
rs765689401 2909 dbSNP
rs1339476189 2925 dbSNP
rs2285547 2926 dbSNP
rs545944674 2937 dbSNP
rs933184692 2941 dbSNP
rs1052055529 2943 dbSNP
rs562948094 2944 dbSNP
rs1404913719 2946 dbSNP
rs866380281 2948 dbSNP
rs1215824287 2951 dbSNP
rs1258879937 2954 dbSNP
rs923272775 2961 dbSNP
rs1429018943 2965 dbSNP
rs1264030985 2967 dbSNP
rs1202215762 2975 dbSNP
rs1460884988 2976 dbSNP
rs780972281 2979 dbSNP
rs531970431 2980 dbSNP
rs1423481777 2982 dbSNP
rs542153415 2982 dbSNP
rs1181932472 2994 dbSNP
rs1251073060 2997 dbSNP
rs1228872959 3002 dbSNP
rs935118677 3003 dbSNP
rs1311130784 3010 dbSNP
rs368146627 3012 dbSNP
rs933418706 3012 dbSNP
rs150791567 3017 dbSNP
rs114946552 3018 dbSNP
rs1470738831 3019 dbSNP
rs1012419439 3026 dbSNP
rs547433271 3027 dbSNP
rs941894995 3029 dbSNP
rs1462486563 3030 dbSNP
rs763813214 3038 dbSNP
rs906671675 3039 dbSNP
rs1003697834 3042 dbSNP
rs755829987 3046 dbSNP
rs1185717334 3066 dbSNP
rs1456604753 3070 dbSNP
rs1037517699 3071 dbSNP
rs897719528 3075 dbSNP
rs1341822278 3077 dbSNP
rs570423757 3080 dbSNP
rs1005641829 3090 dbSNP
rs906228469 3091 dbSNP
rs1358166865 3094 dbSNP
rs539319608 3127 dbSNP
rs1400826242 3134 dbSNP
rs1016911065 3140 dbSNP
rs1454308964 3141 dbSNP
rs555968837 3144 dbSNP
rs1001951294 3146 dbSNP
rs975040407 3150 dbSNP
rs533064758 3151 dbSNP
rs749055960 3152 dbSNP
rs921852412 3153 dbSNP
rs867551330 3159 dbSNP
rs1165530311 3162 dbSNP
rs1437840836 3165 dbSNP
rs768597627 3166 dbSNP
rs1363440362 3175 dbSNP
rs954815139 3179 dbSNP
rs987315713 3181 dbSNP
rs1182750394 3185 dbSNP
rs1239152875 3189 dbSNP
rs1439941397 3190 dbSNP
rs774195576 3194 dbSNP
rs1313858518 3195 dbSNP
rs1291946374 3201 dbSNP
rs1210665304 3203 dbSNP
rs935045167 3211 dbSNP
rs1347842902 3212 dbSNP
rs1278625575 3216 dbSNP
rs181522565 3223 dbSNP
rs923290434 3231 dbSNP
rs1301035198 3248 dbSNP
rs1404315190 3251 dbSNP
rs954904161 3255 dbSNP
rs115497413 3256 dbSNP
rs1417969894 3260 dbSNP
rs1278205943 3262 dbSNP
rs947765248 3264 dbSNP
rs6005034 3265 dbSNP
rs1376352130 3269 dbSNP
rs906775307 3269 dbSNP
rs772199225 3270 dbSNP
rs543745259 3273 dbSNP
rs555357762 3273 dbSNP
rs1215038712 3274 dbSNP
rs113886812 3278 dbSNP
rs189775686 3282 dbSNP
rs1205401854 3284 dbSNP
rs773493136 3285 dbSNP
rs887280659 3300 dbSNP
rs929221431 3301 dbSNP
rs1046777711 3302 dbSNP
rs1222674624 3303 dbSNP
rs906183347 3307 dbSNP
rs180742984 3312 dbSNP
rs1017046453 3322 dbSNP
rs1325970028 3332 dbSNP
rs576884167 3343 dbSNP
rs893530993 3346 dbSNP
rs1404203523 3354 dbSNP
rs1175888626 3359 dbSNP
rs1470526137 3360 dbSNP
rs1431844348 3374 dbSNP
rs996843507 3378 dbSNP
rs1475358334 3383 dbSNP
rs1030112230 3389 dbSNP
rs1021761815 3393 dbSNP
rs903387625 3396 dbSNP
rs1260895892 3397 dbSNP
rs545881154 3398 dbSNP
rs556662389 3400 dbSNP
rs139209821 3403 dbSNP
rs955004470 3408 dbSNP
rs1361168815 3410 dbSNP
rs1030760925 3411 dbSNP
rs542447269 3414 dbSNP
rs1017569370 3421 dbSNP
rs1219743632 3422 dbSNP
rs1300429021 3425 dbSNP
rs989167022 3426 dbSNP
rs963393311 3431 dbSNP
rs1168755213 3433 dbSNP
rs766601466 3434 dbSNP
rs186271915 3440 dbSNP
rs528016223 3442 dbSNP
rs1450831100 3445 dbSNP
rs540981754 3452 dbSNP
rs939584755 3455 dbSNP
rs1043260 3459 dbSNP
rs1043264 3460 dbSNP
rs564082425 3463 dbSNP
rs1204047593 3464 dbSNP
rs1047357546 3467 dbSNP
rs1306646872 3470 dbSNP
rs11913346 3471 dbSNP
rs941489380 3483 dbSNP
rs535615292 3485 dbSNP
rs15127 3489 dbSNP
rs1268792730 3492 dbSNP
rs549608491 3494 dbSNP
rs555824996 3503 dbSNP
rs903333814 3506 dbSNP
rs148867912 3510 dbSNP
rs532791034 3510 dbSNP
rs569765648 3519 dbSNP
rs1030515198 3520 dbSNP
rs1355441807 3530 dbSNP
rs899904867 3539 dbSNP
rs997380699 3548 dbSNP
rs1172162824 3549 dbSNP
rs1423660097 3550 dbSNP
rs529045735 3559 dbSNP
rs1162372272 3567 dbSNP
rs1444642332 3574 dbSNP
rs1364657368 3578 dbSNP
rs1175067098 3580 dbSNP
rs1216757776 3580 dbSNP
rs1281626567 3580 dbSNP
rs1361867100 3580 dbSNP
rs137932565 3580 dbSNP
rs143569858 3580 dbSNP
rs369529613 3580 dbSNP
rs537439856 3580 dbSNP
rs548687400 3580 dbSNP
rs55778752 3580 dbSNP
rs747542713 3580 dbSNP
rs201239212 3583 dbSNP
rs1403710894 3590 dbSNP
rs891128848 3592 dbSNP
rs1365512594 3593 dbSNP
rs1167793936 3600 dbSNP
rs1008786615 3604 dbSNP
rs1351074247 3606 dbSNP
rs754346698 3606 dbSNP
rs781516829 3606 dbSNP
rs1156541042 3609 dbSNP
rs751109383 3613 dbSNP
rs1418125564 3614 dbSNP
rs1436911309 3615 dbSNP
rs58683340 3616 dbSNP
rs1408509774 3619 dbSNP
rs1292912045 3632 dbSNP
rs549180573 3639 dbSNP
rs1184070740 3643 dbSNP
rs3182906 3646 dbSNP
rs1479293041 3651 dbSNP
rs1268128158 3652 dbSNP
rs1223089662 3662 dbSNP
rs1489531358 3669 dbSNP
rs1343545638 3684 dbSNP
rs1007813459 3689 dbSNP
rs866595624 3696 dbSNP
rs956647113 3697 dbSNP
rs1215410213 3704 dbSNP
rs1317740708 3710 dbSNP
rs1280212930 3729 dbSNP
rs1222082314 3742 dbSNP
rs989261930 3746 dbSNP
rs1341141361 3747 dbSNP
rs1214220610 3756 dbSNP
rs1284519065 3762 dbSNP
rs1017558135 3763 dbSNP
rs1022119690 3768 dbSNP
rs1271131577 3770 dbSNP
rs1369164794 3780 dbSNP
rs969124244 3784 dbSNP
rs192129544 3786 dbSNP
rs927620862 3790 dbSNP
rs963378876 3802 dbSNP
rs960670712 3804 dbSNP
rs534611174 3808 dbSNP
rs982467327 3809 dbSNP
rs1200123196 3811 dbSNP
rs1434824973 3812 dbSNP
rs1026377557 3813 dbSNP
rs908780852 3815 dbSNP
rs1486202191 3816 dbSNP
rs1243669350 3819 dbSNP
rs372806940 3823 dbSNP
rs1201963714 3828 dbSNP
rs1323323655 3833 dbSNP
rs1264117480 3840 dbSNP
rs1474319586 3849 dbSNP
rs950846759 3854 dbSNP
rs759853972 3856 dbSNP
rs1295406237 3860 dbSNP
rs941626791 3862 dbSNP
rs765746358 3863 dbSNP
rs982323349 3875 dbSNP
rs1185662846 3879 dbSNP
rs927827080 3883 dbSNP
rs1038546663 3890 dbSNP
rs1467330161 3891 dbSNP
rs570506825 3899 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ucuggggaggAGGUAGg 5'
                    |||||| 
Target 5' ------uucaUCCAUCa 3'
 		1 - 11
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000354336.3 | 3UTR | UUCAUCCAUCAUCUGCUGCACAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
141 hsa-miR-4534 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT087131 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT179641 CAPZA1 capping actin protein of muscle Z-line alpha subunit 1 2 2
MIRT243304 SLC25A36 solute carrier family 25 member 36 2 2
MIRT325574 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT448776 GNA13 G protein subunit alpha 13 2 2
MIRT451456 HSD11B1L hydroxysteroid 11-beta dehydrogenase 1 like 2 2
MIRT452150 PPP2R1B protein phosphatase 2 scaffold subunit Abeta 2 2
MIRT454199 HLA-A major histocompatibility complex, class I, A 2 2
MIRT455984 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 2
MIRT456058 SLC25A28 solute carrier family 25 member 28 2 2
MIRT457082 XPNPEP3 X-prolyl aminopeptidase 3 2 2
MIRT457278 ALDH9A1 aldehyde dehydrogenase 9 family member A1 2 2
MIRT457361 POFUT2 protein O-fucosyltransferase 2 2 2
MIRT457396 CAMK2A calcium/calmodulin dependent protein kinase II alpha 2 2
MIRT458817 ZNF843 zinc finger protein 843 2 2
MIRT459697 VPS37C VPS37C, ESCRT-I subunit 2 2
MIRT460346 ARL14EP ADP ribosylation factor like GTPase 14 effector protein 2 2
MIRT462713 MAPK13 mitogen-activated protein kinase 13 2 2
MIRT464278 VASH1 vasohibin 1 2 2
MIRT465634 TNRC18P2 trinucleotide repeat containing 18 pseudogene 2 2 10
MIRT465772 TMOD3 tropomodulin 3 2 2
MIRT466414 TFDP1 transcription factor Dp-1 2 2
MIRT467122 SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 2 8
MIRT467475 SMYD1 SET and MYND domain containing 1 2 4
MIRT468462 SET SET nuclear proto-oncogene 2 2
MIRT468618 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT468835 RRM2 ribonucleotide reductase regulatory subunit M2 2 4
MIRT470890 PLXND1 plexin D1 2 2
MIRT473226 SMCR7L mitochondrial elongation factor 1 2 4
MIRT473858 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT474975 KCND3 potassium voltage-gated channel subfamily D member 3 2 2
MIRT475858 H6PD hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase 2 2
MIRT478569 CTNND1 catenin delta 1 2 2
MIRT479347 CEP97 centrosomal protein 97 2 2
MIRT479910 CCDC117 coiled-coil domain containing 117 2 4
MIRT480122 CALR calreticulin 2 2
MIRT480892 BCL9L B-cell CLL/lymphoma 9 like 2 2
MIRT481149 AVL9 AVL9 cell migration associated 2 6
MIRT481527 ARL5B ADP ribosylation factor like GTPase 5B 2 10
MIRT481896 ANKRD40 ankyrin repeat domain 40 2 2
MIRT490138 FN3K fructosamine 3 kinase 2 4
MIRT490329 ANK1 ankyrin 1 2 4
MIRT491472 TMEM214 transmembrane protein 214 2 2
MIRT503552 TIGIT T-cell immunoreceptor with Ig and ITIM domains 2 4
MIRT504413 TUBA1B tubulin alpha 1b 2 4
MIRT508207 SLC35E1 solute carrier family 35 member E1 2 2
MIRT508333 SLC37A4 solute carrier family 37 member 4 2 6
MIRT516381 TRAF3IP2 TRAF3 interacting protein 2 2 4
MIRT518549 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT522545 MED28 mediator complex subunit 28 2 6
MIRT522592 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1 like 2 2
MIRT522923 KAT6A lysine acetyltransferase 6A 2 4
MIRT525937 C11orf74 chromosome 11 open reading frame 74 2 2
MIRT527021 PABPN1L poly(A) binding protein nuclear 1 like, cytoplasmic 2 2
MIRT530396 SULT1B1 sulfotransferase family 1B member 1 2 2
MIRT530660 TRIM56 tripartite motif containing 56 2 2
MIRT531625 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT532703 TCN2 transcobalamin 2 2 4
MIRT540173 MB21D1 Mab-21 domain containing 1 2 2
MIRT540756 UTP6 UTP6, small subunit processome component 2 2
MIRT541966 ZNF485 zinc finger protein 485 2 2
MIRT542738 RAF1 Raf-1 proto-oncogene, serine/threonine kinase 2 2
MIRT543090 KNSTRN kinetochore localized astrin/SPAG5 binding protein 2 2
MIRT550687 YARS tyrosyl-tRNA synthetase 2 2
MIRT553466 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT559980 RELA RELA proto-oncogene, NF-kB subunit 2 2
MIRT561084 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT561738 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT569872 KLK10 kallikrein related peptidase 10 2 2
MIRT570264 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT573431 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT573874 PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1 2 2
MIRT576905 Poteg POTE ankyrin domain family, member G 2 2
MIRT607934 ANG angiogenin 2 2
MIRT609472 RPL7L1 ribosomal protein L7 like 1 2 4
MIRT612179 EMC3 ER membrane protein complex subunit 3 2 2
MIRT613428 GALNT6 polypeptide N-acetylgalactosaminyltransferase 6 2 2
MIRT613746 GPR155 G protein-coupled receptor 155 2 2
MIRT615034 DIS3 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease 2 2
MIRT615565 JPH2 junctophilin 2 2 2
MIRT615937 MAP1LC3B microtubule associated protein 1 light chain 3 beta 2 2
MIRT616643 LRAT lecithin retinol acyltransferase 2 4
MIRT630890 SLC25A33 solute carrier family 25 member 33 2 2
MIRT636542 FAM126B family with sequence similarity 126 member B 2 2
MIRT641392 NUBPL nucleotide binding protein like 2 2
MIRT641410 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT643184 HYPK huntingtin interacting protein K 2 2
MIRT652600 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT653974 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT655692 NUDT3 nudix hydrolase 3 2 2
MIRT660734 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 4
MIRT661604 C2orf15 chromosome 2 open reading frame 15 2 2
MIRT663284 ZNF675 zinc finger protein 675 2 2
MIRT666337 SKAP2 src kinase associated phosphoprotein 2 2 2
MIRT666636 RBMS2 RNA binding motif single stranded interacting protein 2 2 2
MIRT667125 OCIAD2 OCIA domain containing 2 2 2
MIRT670412 ELP2 elongator acetyltransferase complex subunit 2 2 2
MIRT671119 ZNF573 zinc finger protein 573 2 2
MIRT671152 ANKRD9 ankyrin repeat domain 9 2 2
MIRT671336 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT671867 ZNF429 zinc finger protein 429 2 2
MIRT671972 IKZF3 IKAROS family zinc finger 3 2 2
MIRT672062 KIAA0930 KIAA0930 2 2
MIRT672652 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672671 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT672768 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672927 LRRC2 leucine rich repeat containing 2 2 2
MIRT673156 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673270 RUNDC1 RUN domain containing 1 2 2
MIRT673329 THAP1 THAP domain containing 1 2 2
MIRT673348 SLC35F6 solute carrier family 35 member F6 2 2
MIRT673664 ZNF440 zinc finger protein 440 2 2
MIRT673901 DCTN6 dynactin subunit 6 2 2
MIRT674399 MYCBP MYC binding protein 2 2
MIRT674523 PRR23A proline rich 23A 2 2
MIRT674831 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 2
MIRT675064 FGD6 FYVE, RhoGEF and PH domain containing 6 2 2
MIRT675078 CCR6 C-C motif chemokine receptor 6 2 2
MIRT675123 FSD2 fibronectin type III and SPRY domain containing 2 2 2
MIRT679399 IL10RB interleukin 10 receptor subunit beta 2 2
MIRT686608 TMEM70 transmembrane protein 70 2 2
MIRT690371 ZSWIM7 zinc finger SWIM-type containing 7 2 2
MIRT694464 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT695706 OLA1 Obg like ATPase 1 2 2
MIRT696846 WDR13 WD repeat domain 13 2 2
MIRT700894 PER2 period circadian clock 2 2 2
MIRT701924 MLLT1 MLLT1, super elongation complex subunit 2 2
MIRT704918 CCDC36 coiled-coil domain containing 36 2 2
MIRT706211 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT706546 GJD2 gap junction protein delta 2 2 2
MIRT706727 RFK riboflavin kinase 2 2
MIRT707366 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT707416 RRP7A ribosomal RNA processing 7 homolog A 2 2
MIRT710646 GLUL glutamate-ammonia ligase 2 2
MIRT712298 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713709 HIST3H2BB histone cluster 3 H2B family member b 2 2
MIRT713751 SLC9A8 solute carrier family 9 member A8 2 2
MIRT716423 VPS53 VPS53, GARP complex subunit 2 2
MIRT717169 UCHL3 ubiquitin C-terminal hydrolase L3 2 2
MIRT718877 PDIA3 protein disulfide isomerase family A member 3 2 2
MIRT720096 SPTLC3 serine palmitoyltransferase long chain base subunit 3 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4534 Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-4534 Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PATU8988)
hsa-miR-4534 Dabrafenib 44462760 NSC764134 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-4534 Vemurafenib 42611257 NSC761431 approved sensitive High Melanoma cell line (A375, IGR37, 501Mel)
hsa-miR-4534 Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-4534 Tamoxifen 2733525 NSC180973 approved resistant High Breast Cancer cell line (MCF-7)
hsa-mir-4534 Androstenedione+Anastrozole sensitive cell line (MCF-7)
hsa-mir-4534 Cisplatin 5460033 NSC119875 approved resistant cell line (BxPC3)
hsa-miR-4534 Cisplatin 5460033 NSC119875 approved resistant cell line (CAL-27) (cytosolic RNA)
hsa-miR-4534 Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-4534 Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-4534 Paclitaxel 36314 NSC125973 approved resistant cell line (A2780)
hsa-miR-4534 Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)
hsa-miR-4534 Platinum 23939 resistant tissue
hsa-miR-4534 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)
hsa-miR-4534 Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-4534 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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