miRTarBase - #MIRT087151


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pre-miRNA Information
pre-miRNA hsa-mir-1277   
Genomic Coordinates chrX: 118386394 - 118386471
Synonyms MIRN1277, hsa-mir-1277, MIR1277
Description Homo sapiens miR-1277 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1277-5p
Sequence 8| AAAUAUAUAUAUAUAUGUACGUAU |31
Evidence Not_experimental
Experiments
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 15 X + 118386415 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs746499482 2 dbSNP
rs770518695 2 dbSNP
rs1198178052 3 dbSNP
rs781269752 6 dbSNP
rs746163811 8 dbSNP
rs1190574471 13 dbSNP
rs1170658098 19 dbSNP
rs776234383 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol HIC2   
Synonyms HRG22, ZBTB30, ZNF907
Description HIC ZBTB transcriptional repressor 2
Transcript NM_015094   
Expression
Putative miRNA Targets on HIC2
3'UTR of HIC2
(miRNA target sites are highlighted)		 
>HIC2|NM_015094|3'UTR
   1 AAGCCAAAGACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAGCAGCA
  81 GGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGTGGCCCCTCTGGCCCCCACTGCCCACACCCAGAGCTTTAATGGACA
 161 GTCCGTACCAAGCAGAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGTCTACCTCCCCATCCCACCCAGGCCCCCAGC
 241 TCCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGGACCTGGTCCCTTTGTTGCAGGCGGC
 321 TTGGAGAAAGGGCAGTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAGCAGGCCTCACCCCGCTGGCCGTGTCTGTGT
 401 GTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGTTCTGCAGGGAACAGGTGCTGGGGGTGCAGATCCCT
 481 CCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAGGGTGACCCCACCGCCTACCTCTCTACATCTAA
 561 AGAGCCCTCTGGGCCTGTGTTGCTGTTATTCCTACTGATCTGTTCCTCTGTTTTTCTTTTTGATTTTTGTTTTTTAAACC
 641 AAAACAGACAATAGCTTATTTTCTTTCCGCCCCCTCCGGGGCTGAGCCTGGGTCTGAAGACTGAATGTAACAGGGGCCGC
 721 TGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCAGGGGTGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCTTCTT
 801 GCCCAAAGGCTTCCCTGGTCCCTGAGCCCTGCCTCGGCTGCCTCAGGGGAGAGTGCTTTTCCTGTAGTTTCCAAGGAATA
 881 TTCTTTGTTTAGAGGTACTTGTTTTTTATTAAGAGAAAAACCAGTGTAACGTTTATGTGACTGTTTGAACTGGAAGGTCT
 961 GGGGTTCCGGGGGGTGGGGGGAGGCTAGACTCAATGCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGT
1041 GTGTGTGTGTGTATGTGCGTATGTGTGTGTCTATGTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCC
1121 TTCCTCGCTGAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGATATGTTGGTGACTGGCAG
1201 TGGAAGCCCTTGACACTCTTGTTTTCCTTCGCTTAGCACCTAGGAAGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTGGC
1281 CCAGTGCCTGCAGCTCACCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGGCACCCCGGG
1361 CACACAAACCTCTGTGGTATAGGTGAGGGGTGTGAGGCCCCAGCCTGGAGCCAGGCACTGGGTGCTGACAGGGGAACCAT
1441 GAGGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAGGGTGAGGCGGAAGTGAGCCCTCATCCTGCCACTCCTATCCTCCAT
1521 TCCTGCAAGAGTTTTAAGCTTGAGAGAGCTGACCACAGGGCCCCCCGGGGAACAGGGATGGCACTTCCCTGAGCAGTCCT
1601 GGCCCCCGGCCACTGTCTCGGGGCCCACCTCTCGCCCCTCATCTTGGTAATTAGCCAGCCTCAGATACTTCTGTGGGCCC
1681 TGAAGTGGGCTCTCAAGGTCAGACCAAGGTTGCTGATCTCAGTCCCACTGTCTTCAGCCAGCTGAAGCTGTGGGGCTGGG
1761 CTGGCAGCCTTTATTGTCATCTTGCTTCACCATTTTTTTTTCTCTCTCTTTTCATTCTATTTTAAGTTTAGACCAAAAAA
1841 ATACAGAGTCATCCCCTACCCCCACCCCTCTAGAGACCCTCCAGCTAAAAACAGAGCCTGAGTTCAGGGACCCAAGTGGT
1921 GAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGGTAGATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAA
2001 GATGGCCCCTCTTCCCTCCTGGTGGGAGACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCT
2081 GGGGGGAGGAGACCCATGGACTTCACCCATACTCAGTGAGGGGGCTCCTGCCGTCCTGACGCCACCCCGCCCCATCAGCA
2161 CTTAAGCCACATGACACAAAGTCTGTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGTGCATGGCCTCCCGGGCTGTG
2241 GGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCAGAACTTCAGGGACTGGGAGCAGAGGCCCCTC
2321 ACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTTTTCTGTGTTTTAATGAGAAAGC
2401 AGAACACTAGTTTCCTATTTAAGACTTTAAGGGTTTGTGGGGCGGGGCGGGATTAACACAACATTTGGCTTTGTTTTCTT
2481 TTTCCTTTGATTTCCACATCAGGTGTGTGCGAGTGTGTGTGTGTGGAGATGTTAAGAGCCTCACAAGGAAACTGGGTTAT
2561 TGGAGGCCAAGGCGGCTTACAGTTCTCTGCGTTCGTCACTTAATTCCTGAATGTTTCAGAGAAACAGGAATCAGAAAATA
2641 GCAGATATCATGTAGGAAAGAGAGGATAAACAAAGAAAAAAGAAAAAAAAATAAGCTCATACCCAAATTCACAAAGCCTA
2721 TTTTTTAAACCAAAGCACATTTTGAATGAGTATGGAACCTCCATGGGCTCAGAAAAAAGATGCTAATATATTTATCTCAT
2801 TGTTTACATAAGCTTTTACAGTTTCAGACCTCAGCAGCTGTAAGGCCAGTCCAGGGAACCCTCCCCTGCTGCTGGAAACC
2881 CTTCTGAGTTGGCCCTGGAGTGGCTCACGGGCAGAGAAGGGTAGCCCTGGGGCTGGGGGAGGGATTGGAAGCCTCCCTGG
2961 AGTCACCTGAGCCCTCGTCCCCATTCCCAGGGCCCCTCCAAGCCCAGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCA
3041 GCCCCCAAGGCCCTCTGGCCGGACCATGCTGGTCCTGACCAGCTAGCCTACGCGGGGATGGCCGTCAGTTCTGGCCACAG
3121 GACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCTCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAG
3201 CCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTGGGGCCCCCTAACCCCACCCCAGGC
3281 AGCGGAAGGGGCTGACTGGGTCTGGTCCTTACCAACATAGACGGTGCAAACACTCTTAACAGTGTTGTTTTTGTATCAAT
3361 ATGTTTGTGCAGTGATGAATGTATTTATTTCTCAGACTTGGGGCGAGTGAGCGGGTGGCAGGCCGGGCTCCGCCACTGCA
3441 TGCTCCCGCCGGACCGAGCCCCAGCAAGGGCTCCTCCAGGATTGCAAAAAAAAAAGGAAGAGAAAAGATGAACCTTTAAG
3521 CAAATAAGAATCTCAGAGACTCGCAGCATAGCCATACACCTCAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTT
3601 CCCCACCTCAGGCAGCCCTGTGTGTTTACCGTTCATCACCACTCGGGGGCACCGGGCCGCCCACCCACTCCCAAAATCCG
3681 TCAGTATTCACTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGGCTGGGCCGCTGGGCAGGCTGACCCCCTGCCCTCC
3761 TGCGGCCATCCTGAGTTGGGGTGAGGCCTGGGCAGCCGGAGGGCAGGGCTCAGGGAGCAGGAGGCTGCATCCGTCCACCC
3841 CCAGGCGTGGGGGACAAAAGCCAAAGGTGCCAGGCCTTAGAGCAGACAAGGGCTCTCAGCCCTGGCATGCCCCCTAAAGG
3921 GACCAAGGTCCTCCTATTTCCCAGAACCCCGTTGGGGCAGATGTTACTGAACCTGTGAATCAGACGCCAGGAGTGAGGGC
4001 TGGGGAGGGACCTAACTGGAGCCTCAGTCTGACATTCCACGCCGGGGTGGGGGTGGGCATGAGCGGTGGGAACTGAGGCT
4081 GCCCAGGACCCCCTTCCTAGGATGCCCCGGCTTCAGTCACCCCACTTTAACTTTCTACCAGGACCCCCTCCCCCTACCTC
4161 ACCTTGCTATTTATTGCTGTAATTTATTGACCTCAAAAATGCTGCATAACAGACCTCACTGGGGCAGGGAGGATCCCCAG
4241 GGCTCCCACCCTCCACTTGGCGGGCCCCGTGGGGCCAGGTGCTGAGGGGAGCCTCTCTACCCCACCCATCACTAGCTTCC
4321 CTCTGCCCTCTCCCACCCCGGGGGGGACCCAGGTTGGGCACTGGCTCATTTCTCGCAAATACCTCGAAGGGGAGGGGGGA
4401 GGGATGGGGTTATAGCTGTTTTGTTTAATTGGAACTGGAAGAGGGATCATGTTTTGTTTTATGCCCTTCCCAGAAGGGGG
4481 GAGGGACACCGGGATCGCACTCCTGTACTGGCCACCGCCGCTGTCACTTGTCACATTGAGTTCATGTCCCTTGAGAGTTT
4561 GTATAAATTCAGGTCAGAGCTGCAGCTACACAGCTGCCCAGTGTCATAGAAAAGCAATTCACCAACGACTGATCTCTCCA
4641 TTCAGAAGTGTGCAGTCTTAAATGTACAGCGATAAGAAACTGTTATTTTATGATCTTTTCATTAAAAGCTTGATTGAAAA
4721 AAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uauGCAUGUAUAUAUAUAUAUAAa 5'
             :|| : |:|||  ||||:|| 
Target 5' tgtTGTTTTTGTATCAATATGTTt 3'
 3343 - 3366 145.00 -6.30
2 
miRNA  3' uauGCAUG----UAUAUAUAUAUAUAAA 5'
             :||:|    ||: ||:||| |||||
Target 5' gttTGTGCAGTGATGAATGTATTTATTT 3'
 3363 - 3390 135.00 -11.60
3 
miRNA  3' uaugcAUGUA-UAUAUAUAUAUAAa 5'
               | ||| | |   ||||:|| 
Target 5' ttgaaTTCATGACAACGATATGTTg 3'
 1165 - 1189 131.00 -5.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31506304 3 COSMIC
COSN30459365 10 COSMIC
COSN24387802 15 COSMIC
COSN30466112 17 COSMIC
COSN31504312 18 COSMIC
COSN30448460 41 COSMIC
COSN18743946 42 COSMIC
COSN28812593 43 COSMIC
COSN30450709 44 COSMIC
COSN30151341 64 COSMIC
COSN30483404 112 COSMIC
COSN30165341 150 COSMIC
COSN31537096 158 COSMIC
COSN32058742 259 COSMIC
COSN28792452 319 COSMIC
COSN31540176 384 COSMIC
COSN32062868 391 COSMIC
COSN31512942 433 COSMIC
COSN31562996 434 COSMIC
COSN28657138 458 COSMIC
COSN30164457 496 COSMIC
COSN26505804 541 COSMIC
COSN31596513 626 COSMIC
COSN29083947 734 COSMIC
COSN32056662 736 COSMIC
COSN31512892 743 COSMIC
COSN26669290 936 COSMIC
COSN31481550 1040 COSMIC
COSN31573170 1054 COSMIC
COSN25131809 1056 COSMIC
COSN31512941 1060 COSMIC
COSN31533458 1118 COSMIC
COSN31552402 1143 COSMIC
COSN31568978 1182 COSMIC
COSN30164581 1213 COSMIC
COSN31556354 1269 COSMIC
COSN8612323 1277 COSMIC
COSN14664731 1479 COSMIC
COSN31607972 1532 COSMIC
COSN24108541 1613 COSMIC
COSN26678708 1635 COSMIC
COSN27411306 1802 COSMIC
COSN31570115 1802 COSMIC
COSN31592897 1863 COSMIC
COSN1259495 2005 COSMIC
COSN31595718 2029 COSMIC
COSN31593324 2080 COSMIC
COSN27567811 2207 COSMIC
COSN31482608 2209 COSMIC
COSN31597290 2241 COSMIC
COSN5454323 2405 COSMIC
COSN8565835 2470 COSMIC
COSN31583231 2479 COSMIC
COSN31485844 2665 COSMIC
COSN31609691 2676 COSMIC
COSN31577435 2682 COSMIC
COSN23275897 2779 COSMIC
COSN31571550 2780 COSMIC
COSN9162026 2875 COSMIC
COSN14899828 3015 COSMIC
COSN26549109 3034 COSMIC
COSN27354679 3094 COSMIC
COSN31566556 3177 COSMIC
COSN31568683 3222 COSMIC
COSN28725738 3354 COSMIC
COSN20117182 3496 COSMIC
COSN31538347 3799 COSMIC
COSN31534080 3804 COSMIC
COSN31518891 3848 COSMIC
COSN30159697 3886 COSMIC
COSN30172949 4022 COSMIC
COSN22194771 4044 COSMIC
COSN8612324 4045 COSMIC
COSN22923208 4046 COSMIC
COSN31488587 4161 COSMIC
COSN31572530 4195 COSMIC
COSN31534713 4387 COSMIC
COSN31610764 4483 COSMIC
COSN30540200 4518 COSMIC
COSN5989135 4582 COSMIC
COSN31548552 4605 COSMIC
COSN15661899 4691 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs556909764 4 dbSNP
rs372801043 14 dbSNP
rs1217675977 15 dbSNP
rs753443515 15 dbSNP
rs149083531 16 dbSNP
rs752127635 17 dbSNP
rs889715795 18 dbSNP
rs1216385615 19 dbSNP
rs560385386 20 dbSNP
rs778140239 21 dbSNP
rs1203211472 24 dbSNP
rs1271519158 26 dbSNP
rs747380548 27 dbSNP
rs1327043951 28 dbSNP
rs1490603698 28 dbSNP
rs771362774 33 dbSNP
rs370763659 42 dbSNP
rs770105614 43 dbSNP
rs1167987413 50 dbSNP
rs775684705 51 dbSNP
rs757455239 52 dbSNP
rs1427440172 53 dbSNP
rs577022048 64 dbSNP
rs1001188176 65 dbSNP
rs548572392 65 dbSNP
rs1284321475 74 dbSNP
rs993462001 75 dbSNP
rs1446109209 77 dbSNP
rs1033941224 86 dbSNP
rs1025065244 92 dbSNP
rs1002049132 93 dbSNP
rs1457962928 94 dbSNP
rs1259744169 95 dbSNP
rs1033502314 100 dbSNP
rs1320903309 101 dbSNP
rs1313255133 102 dbSNP
rs958236404 111 dbSNP
rs1229988592 113 dbSNP
rs1381401890 127 dbSNP
rs1307227269 128 dbSNP
rs1246640275 131 dbSNP
rs960570365 133 dbSNP
rs1333636419 134 dbSNP
rs545697052 136 dbSNP
rs1456654342 138 dbSNP
rs1349699812 139 dbSNP
rs1407618578 141 dbSNP
rs564909117 142 dbSNP
rs1405120410 146 dbSNP
rs1177536432 147 dbSNP
rs530832682 150 dbSNP
rs1439906120 153 dbSNP
rs1239555582 156 dbSNP
rs1446766593 160 dbSNP
rs989407401 165 dbSNP
rs144462135 166 dbSNP
rs993067592 174 dbSNP
rs576813064 180 dbSNP
rs1160416564 181 dbSNP
rs1377755203 183 dbSNP
rs1311692081 190 dbSNP
rs962262810 194 dbSNP
rs1385718820 195 dbSNP
rs758954443 196 dbSNP
rs530313087 198 dbSNP
rs932020287 204 dbSNP
rs540994686 209 dbSNP
rs911873459 210 dbSNP
rs1158588201 215 dbSNP
rs1419701596 217 dbSNP
rs1381658216 219 dbSNP
rs943964657 233 dbSNP
rs1314321460 234 dbSNP
rs1267785373 235 dbSNP
rs942309897 240 dbSNP
rs1484777582 243 dbSNP
rs1262298212 245 dbSNP
rs546920488 246 dbSNP
rs898039961 247 dbSNP
rs891686354 248 dbSNP
rs41282577 249 dbSNP
rs539310648 251 dbSNP
rs1264544207 253 dbSNP
rs1388832431 256 dbSNP
rs1338910116 258 dbSNP
rs552917965 259 dbSNP
rs904289049 265 dbSNP
rs1361861425 280 dbSNP
rs545788039 281 dbSNP
rs1462964812 282 dbSNP
rs1033993750 291 dbSNP
rs906642699 298 dbSNP
rs1476693390 299 dbSNP
rs537867855 302 dbSNP
rs1002272256 309 dbSNP
rs1489256094 310 dbSNP
rs73398478 314 dbSNP
rs577627176 318 dbSNP
rs1015215775 319 dbSNP
rs962600065 320 dbSNP
rs1316396250 321 dbSNP
rs1011118423 330 dbSNP
rs1219777945 336 dbSNP
rs973578394 342 dbSNP
rs1431667250 345 dbSNP
rs1394877174 349 dbSNP
rs1027787898 351 dbSNP
rs759124198 352 dbSNP
rs1304168344 353 dbSNP
rs796527253 356 dbSNP
rs976416852 357 dbSNP
rs868129198 360 dbSNP
rs769292431 366 dbSNP
rs986187319 367 dbSNP
rs1186759035 376 dbSNP
rs1423279805 377 dbSNP
rs953836571 384 dbSNP
rs985218827 385 dbSNP
rs909587950 387 dbSNP
rs1329388138 389 dbSNP
rs911949108 391 dbSNP
rs1244724428 392 dbSNP
rs1282899079 392 dbSNP
rs1340521653 396 dbSNP
rs760521288 396 dbSNP
rs1236197524 402 dbSNP
rs774850705 405 dbSNP
rs929528798 409 dbSNP
rs1388350667 410 dbSNP
rs1162535647 413 dbSNP
rs1222493533 414 dbSNP
rs1369099857 417 dbSNP
rs1185560127 422 dbSNP
rs1262986482 422 dbSNP
rs1437918375 424 dbSNP
rs1482474748 427 dbSNP
rs1046454843 428 dbSNP
rs746916992 431 dbSNP
rs1251788865 432 dbSNP
rs1209730173 433 dbSNP
rs988543035 434 dbSNP
rs1237256776 436 dbSNP
rs1352343580 437 dbSNP
rs1448563403 440 dbSNP
rs1329117707 445 dbSNP
rs533894929 457 dbSNP
rs464694 458 dbSNP
rs184230448 464 dbSNP
rs1156778891 465 dbSNP
rs904341423 470 dbSNP
rs1375731476 474 dbSNP
rs937163522 480 dbSNP
rs545660149 481 dbSNP
rs1042190577 482 dbSNP
rs1168452139 483 dbSNP
rs747042890 484 dbSNP
rs1245336990 489 dbSNP
rs1395619253 495 dbSNP
rs1452567483 496 dbSNP
rs902463681 498 dbSNP
rs895553126 515 dbSNP
rs556076570 516 dbSNP
rs10597644 522 dbSNP
rs71736327 522 dbSNP
rs367710915 527 dbSNP
rs1006927747 535 dbSNP
rs780973240 541 dbSNP
rs1310814362 542 dbSNP
rs1014972511 543 dbSNP
rs1230020864 544 dbSNP
rs1252429934 547 dbSNP
rs1359944062 550 dbSNP
rs763632597 552 dbSNP
rs1423260999 554 dbSNP
rs467127 557 dbSNP
rs1027840174 563 dbSNP
rs1431935249 568 dbSNP
rs1192102287 570 dbSNP
rs1488274228 576 dbSNP
rs1263268055 585 dbSNP
rs761555024 588 dbSNP
rs769422719 590 dbSNP
rs1007711858 598 dbSNP
rs1440199098 601 dbSNP
rs1019066153 603 dbSNP
rs973624788 609 dbSNP
rs1294115203 610 dbSNP
rs1325389358 617 dbSNP
rs544326981 617 dbSNP
rs1276112999 630 dbSNP
rs190832307 639 dbSNP
rs62237327 641 dbSNP
rs374345112 648 dbSNP
rs928164258 650 dbSNP
rs967285263 652 dbSNP
rs1333699872 655 dbSNP
rs938045915 655 dbSNP
rs1415308932 656 dbSNP
rs978619504 664 dbSNP
rs925855070 669 dbSNP
rs915358558 670 dbSNP
rs946772579 672 dbSNP
rs937215677 674 dbSNP
rs755989274 677 dbSNP
rs529438553 678 dbSNP
rs530099923 679 dbSNP
rs1462426666 683 dbSNP
rs1255899098 684 dbSNP
rs1427819318 687 dbSNP
rs549201802 697 dbSNP
rs776653774 712 dbSNP
rs560444523 713 dbSNP
rs1291462821 717 dbSNP
rs781204200 719 dbSNP
rs1036048711 720 dbSNP
rs993912683 730 dbSNP
rs753834525 733 dbSNP
rs994493729 734 dbSNP
rs41282579 735 dbSNP
rs532787487 736 dbSNP
rs1007764023 739 dbSNP
rs1401506723 741 dbSNP
rs1019496446 742 dbSNP
rs1364904458 742 dbSNP
rs966156981 743 dbSNP
rs1412436603 747 dbSNP
rs959877683 751 dbSNP
rs1445936008 753 dbSNP
rs1235910537 759 dbSNP
rs1177663608 760 dbSNP
rs1010041616 762 dbSNP
rs779230760 765 dbSNP
rs748557843 766 dbSNP
rs1263730239 767 dbSNP
rs376781642 768 dbSNP
rs5997950 770 dbSNP
rs1361721464 771 dbSNP
rs968045497 777 dbSNP
rs979399689 778 dbSNP
rs1307288415 781 dbSNP
rs1446382977 792 dbSNP
rs1260853980 793 dbSNP
rs1374472038 799 dbSNP
rs1300335289 802 dbSNP
rs978155313 806 dbSNP
rs925907213 807 dbSNP
rs958582601 818 dbSNP
rs1385745760 821 dbSNP
rs923987988 822 dbSNP
rs1164773023 824 dbSNP
rs34905308 826 dbSNP
rs991342576 828 dbSNP
rs1425966058 829 dbSNP
rs917047772 832 dbSNP
rs1157657103 835 dbSNP
rs1439967818 836 dbSNP
rs569614432 837 dbSNP
rs1189314498 843 dbSNP
rs1162148280 846 dbSNP
rs1247147126 849 dbSNP
rs746132168 862 dbSNP
rs531320841 863 dbSNP
rs1050854966 876 dbSNP
rs1346450562 887 dbSNP
rs889736300 892 dbSNP
rs1284022527 893 dbSNP
rs1239686194 895 dbSNP
rs949845083 898 dbSNP
rs1217762281 902 dbSNP
rs1309434154 902 dbSNP
rs942593129 908 dbSNP
rs1388368744 909 dbSNP
rs1407354423 912 dbSNP
rs1036551607 923 dbSNP
rs1433293409 924 dbSNP
rs1038076702 931 dbSNP
rs1453986566 932 dbSNP
rs1365121985 936 dbSNP
rs1317800046 937 dbSNP
rs147845787 939 dbSNP
rs993796513 942 dbSNP
rs1310758258 952 dbSNP
rs1318800913 957 dbSNP
rs1240048703 961 dbSNP
rs568049364 968 dbSNP
rs1260296582 969 dbSNP
rs1476838274 969 dbSNP
rs1463403122 972 dbSNP
rs1205277442 974 dbSNP
rs1243505679 976 dbSNP
rs1311955528 976 dbSNP
rs1460867542 977 dbSNP
rs1284376933 978 dbSNP
rs1025420525 980 dbSNP
rs533625609 983 dbSNP
rs559588036 998 dbSNP
rs1382235272 999 dbSNP
rs1386539758 1000 dbSNP
rs1419079114 1005 dbSNP
rs1465267294 1006 dbSNP
rs1048749114 1008 dbSNP
rs778439678 1009 dbSNP
rs1463876277 1012 dbSNP
rs1422748964 1014 dbSNP
rs1035581764 1015 dbSNP
rs1193846014 1015 dbSNP
rs1339145402 1020 dbSNP
rs959688414 1026 dbSNP
rs878870554 1029 dbSNP
rs889376428 1030 dbSNP
rs1008186532 1031 dbSNP
rs1301547716 1032 dbSNP
rs1022510739 1035 dbSNP
rs1375629891 1035 dbSNP
rs991472412 1035 dbSNP
rs553849690 1036 dbSNP
rs759597515 1037 dbSNP
rs142556171 1039 dbSNP
rs572034371 1039 dbSNP
rs752891833 1039 dbSNP
rs901978833 1039 dbSNP
rs978039103 1039 dbSNP
rs1338295150 1040 dbSNP
rs1009723751 1041 dbSNP
rs771474212 1041 dbSNP
rs570301253 1043 dbSNP
rs763257886 1043 dbSNP
rs1374864909 1044 dbSNP
rs1444100632 1046 dbSNP
rs903940067 1046 dbSNP
rs747576909 1050 dbSNP
rs1185693673 1052 dbSNP
rs771339121 1054 dbSNP
rs1225549159 1059 dbSNP
rs1250304605 1059 dbSNP
rs372550909 1060 dbSNP
rs1311334897 1062 dbSNP
rs375202816 1062 dbSNP
rs1207938868 1064 dbSNP
rs199649970 1072 dbSNP
rs371581509 1072 dbSNP
rs1033601268 1074 dbSNP
rs958636299 1075 dbSNP
rs141454086 1076 dbSNP
rs991788971 1082 dbSNP
rs1024214524 1089 dbSNP
rs796354762 1090 dbSNP
rs368621560 1095 dbSNP
rs1292872868 1096 dbSNP
rs1176696284 1110 dbSNP
rs1385967672 1117 dbSNP
rs971662595 1118 dbSNP
rs1035229017 1127 dbSNP
rs971918969 1128 dbSNP
rs1363570660 1140 dbSNP
rs1182908883 1153 dbSNP
rs919041475 1162 dbSNP
rs1265832736 1165 dbSNP
rs1414200514 1167 dbSNP
rs1222427600 1172 dbSNP
rs1358745559 1175 dbSNP
rs1174614747 1181 dbSNP
rs930343493 1182 dbSNP
rs1293372248 1184 dbSNP
rs1237505876 1185 dbSNP
rs1352610168 1190 dbSNP
rs1279788395 1194 dbSNP
rs1419009631 1196 dbSNP
rs895313149 1198 dbSNP
rs1356741203 1199 dbSNP
rs984456146 1205 dbSNP
rs556036570 1208 dbSNP
rs1322760696 1211 dbSNP
rs1443534642 1212 dbSNP
rs544143201 1219 dbSNP
rs1348691859 1223 dbSNP
rs775114002 1225 dbSNP
rs575972108 1231 dbSNP
rs999510201 1232 dbSNP
rs1471331981 1233 dbSNP
rs1366682134 1237 dbSNP
rs542117498 1250 dbSNP
rs955493605 1251 dbSNP
rs1270403188 1252 dbSNP
rs554621160 1255 dbSNP
rs945571142 1257 dbSNP
rs1284473297 1269 dbSNP
rs911274140 1271 dbSNP
rs1342587419 1272 dbSNP
rs796621755 1279 dbSNP
rs1282472000 1280 dbSNP
rs574791925 1281 dbSNP
rs1308043019 1288 dbSNP
rs1224030679 1289 dbSNP
rs1204340811 1290 dbSNP
rs1347258003 1319 dbSNP
rs1276232562 1330 dbSNP
rs1271936466 1333 dbSNP
rs1490681874 1339 dbSNP
rs1042500783 1340 dbSNP
rs3747085 1352 dbSNP
rs1402700048 1354 dbSNP
rs973906550 1355 dbSNP
rs558949243 1358 dbSNP
rs528796371 1359 dbSNP
rs895168741 1360 dbSNP
rs146923472 1361 dbSNP
rs1168441759 1365 dbSNP
rs561947102 1368 dbSNP
rs1474767057 1370 dbSNP
rs1242245743 1373 dbSNP
rs1194841263 1380 dbSNP
rs551709775 1389 dbSNP
rs1262133854 1391 dbSNP
rs546458125 1395 dbSNP
rs1325462197 1403 dbSNP
rs1256018258 1406 dbSNP
rs1213962142 1410 dbSNP
rs565550063 1430 dbSNP
rs971330039 1434 dbSNP
rs938294068 1444 dbSNP
rs1434540344 1451 dbSNP
rs1271779065 1465 dbSNP
rs1336332082 1468 dbSNP
rs972313968 1470 dbSNP
rs563080955 1471 dbSNP
rs1169136730 1472 dbSNP
rs894201271 1473 dbSNP
rs1012841535 1484 dbSNP
rs531993976 1485 dbSNP
rs1242098637 1497 dbSNP
rs1014909592 1500 dbSNP
rs984510144 1508 dbSNP
rs1462467162 1509 dbSNP
rs1236173426 1513 dbSNP
rs1203724166 1515 dbSNP
rs1308067856 1518 dbSNP
rs529063104 1523 dbSNP
rs910288977 1535 dbSNP
rs1361017574 1536 dbSNP
rs1275047524 1541 dbSNP
rs1216339494 1546 dbSNP
rs1357414950 1554 dbSNP
rs566576141 1566 dbSNP
rs78874131 1566 dbSNP
rs1288504287 1567 dbSNP
rs999729231 1568 dbSNP
rs561493612 1569 dbSNP
rs955380647 1573 dbSNP
rs1355554557 1574 dbSNP
rs1331497782 1575 dbSNP
rs1217493069 1579 dbSNP
rs923527791 1584 dbSNP
rs1403048548 1585 dbSNP
rs1384118532 1589 dbSNP
rs1244207027 1595 dbSNP
rs1163789982 1598 dbSNP
rs1446150540 1599 dbSNP
rs1378239745 1600 dbSNP
rs773752199 1603 dbSNP
rs1042552497 1604 dbSNP
rs185328082 1608 dbSNP
rs761606432 1609 dbSNP
rs974338638 1620 dbSNP
rs772474613 1621 dbSNP
rs1164337732 1629 dbSNP
rs1055161732 1633 dbSNP
rs919756309 1634 dbSNP
rs951312283 1635 dbSNP
rs1403867548 1647 dbSNP
rs41282581 1650 dbSNP
rs1374536736 1656 dbSNP
rs982704289 1657 dbSNP
rs1403677027 1661 dbSNP
rs928497547 1662 dbSNP
rs1303291280 1665 dbSNP
rs547157778 1670 dbSNP
rs1345574071 1672 dbSNP
rs938365043 1679 dbSNP
rs1157960957 1683 dbSNP
rs1055436644 1686 dbSNP
rs1409954511 1689 dbSNP
rs1189368430 1695 dbSNP
rs1434040907 1697 dbSNP
rs895230786 1703 dbSNP
rs1268255010 1710 dbSNP
rs1223231255 1715 dbSNP
rs1490869602 1719 dbSNP
rs1318490192 1722 dbSNP
rs140753237 1723 dbSNP
rs1046356731 1726 dbSNP
rs1317861166 1726 dbSNP
rs1286860288 1727 dbSNP
rs1246586067 1740 dbSNP
rs767355555 1741 dbSNP
rs1345373716 1750 dbSNP
rs907114883 1751 dbSNP
rs1353631476 1754 dbSNP
rs537500247 1759 dbSNP
rs1225117423 1763 dbSNP
rs41282583 1769 dbSNP
rs904021559 1773 dbSNP
rs549526159 1775 dbSNP
rs1346744541 1785 dbSNP
rs999613050 1790 dbSNP
rs760703660 1792 dbSNP
rs1052637634 1793 dbSNP
rs569941139 1793 dbSNP
rs768578547 1794 dbSNP
rs1465647674 1800 dbSNP
rs1259790330 1801 dbSNP
rs148016775 1801 dbSNP
rs1491563993 1801 dbSNP
rs891352096 1801 dbSNP
rs1008676358 1802 dbSNP
rs1491396009 1802 dbSNP
rs1246538152 1803 dbSNP
rs1463100528 1805 dbSNP
rs1264247759 1806 dbSNP
rs1188834895 1807 dbSNP
rs1305229072 1807 dbSNP
rs1294319724 1809 dbSNP
rs1367975018 1809 dbSNP
rs374629907 1810 dbSNP
rs188895226 1811 dbSNP
rs181339867 1812 dbSNP
rs1027038781 1814 dbSNP
rs1406603156 1818 dbSNP
rs951198102 1818 dbSNP
rs1456894472 1820 dbSNP
rs1460462928 1828 dbSNP
rs1371392789 1829 dbSNP
rs1017400007 1830 dbSNP
rs1429202737 1834 dbSNP
rs1250092304 1835 dbSNP
rs1408023046 1835 dbSNP
rs1461130845 1843 dbSNP
rs1035619573 1845 dbSNP
rs959971317 1845 dbSNP
rs1479979044 1846 dbSNP
rs73877618 1851 dbSNP
rs915574508 1855 dbSNP
rs947156807 1860 dbSNP
rs978488587 1870 dbSNP
rs1338223376 1874 dbSNP
rs555666930 1875 dbSNP
rs766208644 1878 dbSNP
rs1338525169 1888 dbSNP
rs1389472812 1892 dbSNP
rs935516757 1893 dbSNP
rs1298713121 1906 dbSNP
rs1462519357 1907 dbSNP
rs1392158016 1910 dbSNP
rs1161870061 1911 dbSNP
rs1328092781 1914 dbSNP
rs184021014 1924 dbSNP
rs367546785 1925 dbSNP
rs867633666 1926 dbSNP
rs555624338 1928 dbSNP
rs936882508 1929 dbSNP
rs3747086 1930 dbSNP
rs1481308552 1935 dbSNP
rs752910253 1937 dbSNP
rs1359635443 1945 dbSNP
rs995875395 1946 dbSNP
rs916659241 1951 dbSNP
rs1334973594 1956 dbSNP
rs758681866 1964 dbSNP
rs1393108238 1966 dbSNP
rs1301440759 1980 dbSNP
rs1219853053 1982 dbSNP
rs1046848879 1984 dbSNP
rs577367742 1987 dbSNP
rs1366358823 1995 dbSNP
rs546321257 2003 dbSNP
rs1004077035 2010 dbSNP
rs113747126 2015 dbSNP
rs533212795 2019 dbSNP
rs1047698710 2022 dbSNP
rs960268562 2026 dbSNP
rs1197980183 2031 dbSNP
rs1267396248 2031 dbSNP
rs1490378938 2031 dbSNP
rs1291523593 2032 dbSNP
rs1203062225 2035 dbSNP
rs1349644622 2045 dbSNP
rs991411304 2051 dbSNP
rs887690708 2053 dbSNP
rs1400042676 2058 dbSNP
rs1411561227 2065 dbSNP
rs1282568445 2068 dbSNP
rs1329020689 2073 dbSNP
rs1006067235 2074 dbSNP
rs1023267987 2076 dbSNP
rs1325736177 2080 dbSNP
rs1349318269 2081 dbSNP
rs1407624135 2083 dbSNP
rs1159450672 2084 dbSNP
rs1459160379 2086 dbSNP
rs41282585 2098 dbSNP
rs978372544 2102 dbSNP
rs1347819022 2110 dbSNP
rs1234362494 2114 dbSNP
rs1176362462 2115 dbSNP
rs964836287 2116 dbSNP
rs1255751941 2120 dbSNP
rs188604445 2133 dbSNP
rs1030483625 2134 dbSNP
rs1262014395 2136 dbSNP
rs1275519565 2137 dbSNP
rs966374708 2139 dbSNP
rs977727138 2140 dbSNP
rs2287409 2141 dbSNP
rs958248073 2142 dbSNP
rs1345799458 2145 dbSNP
rs912724627 2149 dbSNP
rs990949312 2150 dbSNP
rs916727934 2151 dbSNP
rs766186687 2152 dbSNP
rs41282587 2153 dbSNP
rs1404428032 2155 dbSNP
rs5753562 2159 dbSNP
rs1046503549 2166 dbSNP
rs1470627532 2167 dbSNP
rs918648716 2172 dbSNP
rs1165598267 2177 dbSNP
rs1474799877 2178 dbSNP
rs1373250606 2188 dbSNP
rs781511217 2189 dbSNP
rs1271255741 2190 dbSNP
rs748834082 2191 dbSNP
rs1197953784 2193 dbSNP
rs1048392643 2194 dbSNP
rs1375714250 2195 dbSNP
rs1048412528 2199 dbSNP
rs1230941761 2200 dbSNP
rs5997955 2201 dbSNP
rs1336551462 2202 dbSNP
rs941902692 2203 dbSNP
rs532818042 2207 dbSNP
rs900364168 2208 dbSNP
rs549489246 2209 dbSNP
rs1030122554 2210 dbSNP
rs1170086735 2217 dbSNP
rs138555942 2218 dbSNP
rs1013123363 2227 dbSNP
rs1022898668 2231 dbSNP
rs1473673445 2233 dbSNP
rs543447678 2234 dbSNP
rs563030931 2237 dbSNP
rs1031927180 2248 dbSNP
rs773834911 2249 dbSNP
rs1031297412 2251 dbSNP
rs991056170 2252 dbSNP
rs1024293539 2266 dbSNP
rs535666897 2267 dbSNP
rs1229212800 2279 dbSNP
rs1381828597 2281 dbSNP
rs1278274739 2283 dbSNP
rs1442198928 2285 dbSNP
rs1341569472 2287 dbSNP
rs549002724 2289 dbSNP
rs1309251941 2295 dbSNP
rs1422216712 2297 dbSNP
rs965594185 2298 dbSNP
rs771677865 2305 dbSNP
rs573431459 2307 dbSNP
rs918712689 2309 dbSNP
rs566005051 2311 dbSNP
rs1405569507 2323 dbSNP
rs1176547959 2324 dbSNP
rs1209449178 2326 dbSNP
rs930006428 2327 dbSNP
rs984141808 2328 dbSNP
rs773043492 2329 dbSNP
rs942665559 2330 dbSNP
rs149397574 2331 dbSNP
rs111480484 2332 dbSNP
rs542776510 2339 dbSNP
rs1282665466 2343 dbSNP
rs1052001866 2349 dbSNP
rs902272477 2350 dbSNP
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rs999206007 2361 dbSNP
rs1402500898 2369 dbSNP
rs1031978939 2372 dbSNP
rs1057217360 2373 dbSNP
rs1368536849 2377 dbSNP
rs766373459 2388 dbSNP
rs1158030342 2390 dbSNP
rs1291373630 2394 dbSNP
rs539905635 2397 dbSNP
rs895863211 2399 dbSNP
rs893499868 2401 dbSNP
rs1012307710 2403 dbSNP
rs1268324218 2404 dbSNP
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rs528734195 2419 dbSNP
rs1044605375 2426 dbSNP
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rs146375206 2444 dbSNP
rs1023929457 2445 dbSNP
rs1330269894 2449 dbSNP
rs971378045 2450 dbSNP
rs1315005675 2453 dbSNP
rs1031518130 2456 dbSNP
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rs368130055 2459 dbSNP
rs1388023358 2462 dbSNP
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rs1322340504 2469 dbSNP
rs3217187 2470 dbSNP
rs551781290 2470 dbSNP
rs1390630374 2474 dbSNP
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rs1263859394 2494 dbSNP
rs776369360 2498 dbSNP
rs1025795321 2501 dbSNP
rs542459423 2511 dbSNP
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rs1322619586 2513 dbSNP
rs1417575060 2513 dbSNP
rs955710168 2513 dbSNP
rs759675850 2516 dbSNP
rs1185333090 2524 dbSNP
rs1008494321 2525 dbSNP
rs35582296 2547 dbSNP
rs942757533 2547 dbSNP
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rs921882349 2559 dbSNP
rs1018710630 2566 dbSNP
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rs562237833 2575 dbSNP
rs1257105036 2577 dbSNP
rs762149316 2579 dbSNP
rs1305284564 2580 dbSNP
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rs1294384475 2588 dbSNP
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rs765472988 2591 dbSNP
rs752484171 2592 dbSNP
rs1451646860 2593 dbSNP
rs1402772401 2595 dbSNP
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rs138460208 2603 dbSNP
rs1388346766 2604 dbSNP
rs1352875148 2610 dbSNP
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rs1450387036 2638 dbSNP
rs923746810 2639 dbSNP
rs181000051 2640 dbSNP
rs952973830 2646 dbSNP
rs1433539196 2647 dbSNP
rs1305035439 2648 dbSNP
rs143086816 2649 dbSNP
rs908752893 2653 dbSNP
rs1202759523 2655 dbSNP
rs940019653 2659 dbSNP
rs146046102 2660 dbSNP
rs1205266393 2672 dbSNP
rs367613130 2672 dbSNP
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rs993207308 2672 dbSNP
rs57102371 2676 dbSNP
rs1340893852 2680 dbSNP
rs1491509020 2681 dbSNP
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rs1044273136 2683 dbSNP
rs3179053 2683 dbSNP
rs747669846 2683 dbSNP
rs904375766 2683 dbSNP
rs935798033 2683 dbSNP
rs543091219 2693 dbSNP
rs1369450241 2697 dbSNP
rs1267338420 2701 dbSNP
rs1053491140 2703 dbSNP
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rs1417917869 2718 dbSNP
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rs563443530 2721 dbSNP
rs891686038 2733 dbSNP
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rs1019006970 2752 dbSNP
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rs1288946040 2760 dbSNP
rs906803099 2764 dbSNP
rs1252044280 2765 dbSNP
rs1386492282 2773 dbSNP
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rs1165292936 2788 dbSNP
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rs1160612834 2812 dbSNP
rs5753564 2828 dbSNP
rs527432237 2841 dbSNP
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rs1027372859 2852 dbSNP
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rs1451762395 2862 dbSNP
rs1269027479 2865 dbSNP
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rs952857936 2870 dbSNP
rs1230198307 2873 dbSNP
rs1331320651 2875 dbSNP
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rs763307446 2880 dbSNP
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rs951549634 2890 dbSNP
rs1388414194 2894 dbSNP
rs1321801883 2895 dbSNP
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rs565736890 2910 dbSNP
rs185938972 2920 dbSNP
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rs551714210 2966 dbSNP
rs1459883428 2972 dbSNP
rs778080803 2973 dbSNP
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rs1220693525 2989 dbSNP
rs891736627 2998 dbSNP
rs1311599681 2999 dbSNP
rs987375723 3000 dbSNP
rs1437732842 3023 dbSNP
rs539872766 3024 dbSNP
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rs1276172761 3046 dbSNP
rs1483056324 3050 dbSNP
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rs995814614 3061 dbSNP
rs1053542127 3062 dbSNP
rs887495901 3064 dbSNP
rs1481199337 3067 dbSNP
rs915004369 3069 dbSNP
rs868803221 3071 dbSNP
rs1443067920 3073 dbSNP
rs1280895320 3075 dbSNP
rs1190307126 3083 dbSNP
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rs947754671 3089 dbSNP
rs751985491 3092 dbSNP
rs906221688 3093 dbSNP
rs1003192864 3094 dbSNP
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rs556695372 3096 dbSNP
rs1341730829 3097 dbSNP
rs1372493418 3099 dbSNP
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rs781728707 3105 dbSNP
rs1370750653 3108 dbSNP
rs1170142095 3109 dbSNP
rs1368989944 3112 dbSNP
rs970481498 3119 dbSNP
rs1412881694 3122 dbSNP
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rs980044184 3127 dbSNP
rs926069204 3135 dbSNP
rs1180054584 3139 dbSNP
rs535586798 3143 dbSNP
rs1252786800 3147 dbSNP
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rs1289690107 3168 dbSNP
rs1229266543 3170 dbSNP
rs964177785 3185 dbSNP
rs1408660141 3186 dbSNP
rs997307788 3196 dbSNP
rs944520969 3198 dbSNP
rs1342280079 3203 dbSNP
rs555882786 3211 dbSNP
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rs1029732096 3220 dbSNP
rs1203873303 3221 dbSNP
rs1271826488 3222 dbSNP
rs955579749 3223 dbSNP
rs977390023 3225 dbSNP
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rs756607428 3234 dbSNP
rs116756031 3239 dbSNP
rs1247674606 3240 dbSNP
rs1246353934 3245 dbSNP
rs375507908 3254 dbSNP
rs915031492 3255 dbSNP
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rs1329218904 3260 dbSNP
rs1289615086 3261 dbSNP
rs541293056 3262 dbSNP
rs771739093 3267 dbSNP
rs1438320793 3268 dbSNP
rs927733947 3276 dbSNP
rs192469690 3281 dbSNP
rs1046731742 3284 dbSNP
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rs887362303 3286 dbSNP
rs572157716 3288 dbSNP
rs1433965547 3289 dbSNP
rs1014404123 3300 dbSNP
rs150850734 3301 dbSNP
rs1192030167 3303 dbSNP
rs543054375 3304 dbSNP
rs970323455 3308 dbSNP
rs1001514882 3309 dbSNP
rs1208508103 3312 dbSNP
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rs1270602195 3317 dbSNP
rs1207367377 3318 dbSNP
rs757244132 3319 dbSNP
rs900025843 3323 dbSNP
rs997005130 3324 dbSNP
rs563147286 3325 dbSNP
rs1294844962 3326 dbSNP
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rs1357784688 3330 dbSNP
rs1301043517 3333 dbSNP
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rs1177055376 3336 dbSNP
rs1436748711 3343 dbSNP
rs373354483 3345 dbSNP
rs891202152 3348 dbSNP
rs1288652215 3359 dbSNP
rs913277244 3360 dbSNP
rs966288261 3364 dbSNP
rs1180674260 3371 dbSNP
rs1212265459 3373 dbSNP
rs998819014 3375 dbSNP
rs1465791361 3383 dbSNP
rs1188420727 3386 dbSNP
rs1273490832 3388 dbSNP
rs1240433675 3389 dbSNP
rs73877619 3394 dbSNP
rs931898098 3398 dbSNP
rs1048795390 3401 dbSNP
rs956641107 3405 dbSNP
rs1227146757 3406 dbSNP
rs542376520 3413 dbSNP
rs908887335 3423 dbSNP
rs1413401724 3424 dbSNP
rs989385825 3425 dbSNP
rs1022195367 3426 dbSNP
rs181942485 3432 dbSNP
rs896209233 3433 dbSNP
rs1434303121 3435 dbSNP
rs1481803066 3439 dbSNP
rs777256361 3440 dbSNP
rs927712015 3448 dbSNP
rs939046711 3449 dbSNP
rs746827244 3451 dbSNP
rs528327460 3452 dbSNP
rs1353871059 3454 dbSNP
rs940990397 3456 dbSNP
rs41282589 3457 dbSNP
rs1010168872 3459 dbSNP
rs900077838 3466 dbSNP
rs1292088696 3474 dbSNP
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rs1020799221 3483 dbSNP
rs1471309544 3485 dbSNP
rs1410676149 3486 dbSNP
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rs34482610 3486 dbSNP
rs398036575 3486 dbSNP
rs75467954 3486 dbSNP
rs1330164582 3494 dbSNP
rs1208684086 3495 dbSNP
rs796312418 3495 dbSNP
rs200472329 3496 dbSNP
rs201786667 3496 dbSNP
rs1444610097 3497 dbSNP
rs1188378645 3498 dbSNP
rs200031390 3499 dbSNP
rs1236969818 3503 dbSNP
rs932845743 3513 dbSNP
rs966139112 3519 dbSNP
rs571617004 3525 dbSNP
rs1412446133 3526 dbSNP
rs891213061 3527 dbSNP
rs1287731470 3528 dbSNP
rs759461307 3529 dbSNP
rs1229101153 3531 dbSNP
rs1456476811 3535 dbSNP
rs1028822601 3539 dbSNP
rs1386530049 3541 dbSNP
rs998872736 3543 dbSNP
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rs567736249 3548 dbSNP
rs1388569376 3549 dbSNP
rs9609460 3552 dbSNP
rs1159199524 3554 dbSNP
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rs1375542890 3558 dbSNP
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rs1183066449 3560 dbSNP
rs1197785905 3561 dbSNP
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rs1404328573 3567 dbSNP
rs1206593433 3574 dbSNP
rs533358611 3579 dbSNP
rs1011531135 3580 dbSNP
rs1022669191 3584 dbSNP
rs984710863 3585 dbSNP
rs909107965 3587 dbSNP
rs940354024 3590 dbSNP
rs770578389 3596 dbSNP
rs1338132072 3600 dbSNP
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rs550111375 3608 dbSNP
rs775763254 3609 dbSNP
rs1365055378 3610 dbSNP
rs1034839791 3611 dbSNP
rs949161853 3619 dbSNP
rs960459987 3623 dbSNP
rs1351507949 3628 dbSNP
rs569953621 3631 dbSNP
rs908271155 3632 dbSNP
rs906037906 3634 dbSNP
rs962407910 3635 dbSNP
rs1188375652 3640 dbSNP
rs973755741 3642 dbSNP
rs1199959586 3643 dbSNP
rs1348815071 3645 dbSNP
rs893358954 3645 dbSNP
rs535917153 3646 dbSNP
rs764415741 3649 dbSNP
rs901962311 3651 dbSNP
rs751673211 3654 dbSNP
rs1051719530 3655 dbSNP
rs1484696209 3657 dbSNP
rs997619042 3658 dbSNP
rs745429204 3659 dbSNP
rs772631181 3660 dbSNP
rs369915364 3668 dbSNP
rs912700505 3669 dbSNP
rs1428839875 3676 dbSNP
rs984596721 3680 dbSNP
rs374462611 3681 dbSNP
rs1179450577 3692 dbSNP
rs1053170646 3693 dbSNP
rs961937837 3695 dbSNP
rs893215337 3697 dbSNP
rs972179698 3700 dbSNP
rs1486064510 3703 dbSNP
rs1259849519 3704 dbSNP
rs1478321707 3705 dbSNP
rs917584528 3709 dbSNP
rs1341893015 3712 dbSNP
rs1274073389 3716 dbSNP
rs879764793 3719 dbSNP
rs1044366061 3720 dbSNP
rs1216702564 3721 dbSNP
rs905130016 3724 dbSNP
rs1002100528 3725 dbSNP
rs775903742 3727 dbSNP
rs1308088500 3728 dbSNP
rs565612147 3734 dbSNP
rs960551347 3734 dbSNP
rs1004044475 3740 dbSNP
rs1015385018 3741 dbSNP
rs536760759 3751 dbSNP
rs1330586656 3753 dbSNP
rs1333132284 3756 dbSNP
rs1403432026 3757 dbSNP
rs1234613704 3761 dbSNP
rs1274737303 3763 dbSNP
rs1345845222 3764 dbSNP
rs1163824770 3769 dbSNP
rs1475569797 3774 dbSNP
rs974147433 3777 dbSNP
rs893411414 3781 dbSNP
rs1230772723 3788 dbSNP
rs920916112 3793 dbSNP
rs139324108 3798 dbSNP
rs987094889 3799 dbSNP
rs1482891866 3801 dbSNP
rs1194286638 3804 dbSNP
rs1269203477 3805 dbSNP
rs1233689123 3812 dbSNP
rs1207013007 3813 dbSNP
rs1450282636 3816 dbSNP
rs1451923435 3818 dbSNP
rs558019593 3827 dbSNP
rs1042144165 3830 dbSNP
rs912812545 3832 dbSNP
rs750766372 3833 dbSNP
rs577875234 3834 dbSNP
rs1393246844 3835 dbSNP
rs1227272732 3845 dbSNP
rs1373563163 3846 dbSNP
rs777167304 3847 dbSNP
rs541614377 3848 dbSNP
rs947473046 3856 dbSNP
rs144372197 3858 dbSNP
rs1462888889 3869 dbSNP
rs905895248 3871 dbSNP
rs41282591 3872 dbSNP
rs1156971969 3874 dbSNP
rs1294855322 3875 dbSNP
rs1408945393 3880 dbSNP
rs1393370133 3884 dbSNP
rs1477235349 3887 dbSNP
rs1246557306 3891 dbSNP
rs746731906 3893 dbSNP
rs1325630617 3894 dbSNP
rs752239180 3896 dbSNP
rs1317042453 3901 dbSNP
rs970436220 3908 dbSNP
rs185874829 3910 dbSNP
rs1303800283 3913 dbSNP
rs1298499371 3916 dbSNP
rs1362894106 3917 dbSNP
rs1341462578 3924 dbSNP
rs1453117798 3926 dbSNP
rs559212512 3927 dbSNP
rs751319462 3929 dbSNP
rs561497913 3931 dbSNP
rs190368494 3932 dbSNP
rs777497833 3934 dbSNP
rs1041991773 3937 dbSNP
rs1209062535 3945 dbSNP
rs995238366 3948 dbSNP
rs1028477841 3950 dbSNP
rs1050401319 3951 dbSNP
rs565089105 3952 dbSNP
rs986864377 3953 dbSNP
rs1019833227 3959 dbSNP
rs1280636348 3964 dbSNP
rs956253238 3966 dbSNP
rs1339861918 3970 dbSNP
rs988959129 3973 dbSNP
rs1296764865 3978 dbSNP
rs914716510 3986 dbSNP
rs1006304374 3987 dbSNP
rs1290646281 3991 dbSNP
rs768453811 4003 dbSNP
rs1166501552 4009 dbSNP
rs1375045485 4010 dbSNP
rs41282593 4015 dbSNP
rs1457072348 4024 dbSNP
rs1436958848 4028 dbSNP
rs897664056 4035 dbSNP
rs1170194856 4036 dbSNP
rs1429568392 4038 dbSNP
rs550622982 4041 dbSNP
rs1179570459 4042 dbSNP
rs993712396 4044 dbSNP
rs1257753737 4046 dbSNP
rs927365465 4047 dbSNP
rs1459299285 4048 dbSNP
rs1212647752 4050 dbSNP
rs1024903038 4054 dbSNP
rs563667023 4054 dbSNP
rs1227901212 4055 dbSNP
rs529306880 4065 dbSNP
rs938728997 4066 dbSNP
rs1310540819 4069 dbSNP
rs368696433 4074 dbSNP
rs1321760757 4086 dbSNP
rs1361381911 4088 dbSNP
rs1380648809 4090 dbSNP
rs896405077 4092 dbSNP
rs1368963358 4093 dbSNP
rs770614249 4098 dbSNP
rs1341366202 4101 dbSNP
rs1033303756 4103 dbSNP
rs1163349656 4105 dbSNP
rs939894351 4106 dbSNP
rs780889033 4109 dbSNP
rs1271050702 4110 dbSNP
rs898356883 4114 dbSNP
rs182839354 4116 dbSNP
rs530208473 4119 dbSNP
rs1209313975 4120 dbSNP
rs1481523470 4120 dbSNP
rs534802187 4122 dbSNP
rs889500203 4123 dbSNP
rs551512618 4124 dbSNP
rs571526285 4125 dbSNP
rs1484840497 4126 dbSNP
rs1335401808 4128 dbSNP
rs1293925990 4132 dbSNP
rs187112142 4138 dbSNP
rs1256241322 4140 dbSNP
rs1019217165 4145 dbSNP
rs147829679 4146 dbSNP
rs1399152959 4149 dbSNP
rs933568578 4156 dbSNP
rs989053979 4158 dbSNP
rs117371082 4160 dbSNP
rs1166403013 4163 dbSNP
rs1471340283 4168 dbSNP
rs1185275100 4175 dbSNP
rs535916011 4179 dbSNP
rs553026456 4180 dbSNP
rs941972789 4190 dbSNP
rs745636108 4192 dbSNP
rs1420654059 4195 dbSNP
rs1264924486 4200 dbSNP
rs897873849 4203 dbSNP
rs993371134 4205 dbSNP
rs980667840 4206 dbSNP
rs1275010482 4208 dbSNP
rs1215605035 4209 dbSNP
rs927406795 4215 dbSNP
rs1327222451 4217 dbSNP
rs1181814151 4218 dbSNP
rs190095884 4221 dbSNP
rs1002068018 4232 dbSNP
rs1345156082 4239 dbSNP
rs1337757627 4242 dbSNP
rs1033522489 4243 dbSNP
rs893493100 4244 dbSNP
rs1452255470 4249 dbSNP
rs1455177903 4251 dbSNP
rs992845507 4257 dbSNP
rs1383703026 4259 dbSNP
rs759542310 4259 dbSNP
rs545130870 4262 dbSNP
rs1375594683 4265 dbSNP
rs1020690464 4269 dbSNP
rs966843824 4270 dbSNP
rs940658054 4274 dbSNP
rs748151812 4277 dbSNP
rs1445347062 4288 dbSNP
rs759320203 4293 dbSNP
rs775501766 4295 dbSNP
rs11557465 4300 dbSNP
rs1305986852 4301 dbSNP
rs565045797 4304 dbSNP
rs1306267816 4305 dbSNP
rs910781845 4314 dbSNP
rs889563143 4317 dbSNP
rs1007905370 4320 dbSNP
rs1019311231 4324 dbSNP
rs575526430 4325 dbSNP
rs973386842 4327 dbSNP
rs763136257 4328 dbSNP
rs929379312 4329 dbSNP
rs1046261010 4336 dbSNP
rs1311946347 4336 dbSNP
rs1396728759 4338 dbSNP
rs1472694071 4339 dbSNP
rs1009852964 4340 dbSNP
rs1255639337 4340 dbSNP
rs906365879 4340 dbSNP
rs768674062 4341 dbSNP
rs969340325 4343 dbSNP
rs1001711176 4346 dbSNP
rs1417866653 4347 dbSNP
rs1034907266 4349 dbSNP
rs960124625 4350 dbSNP
rs11557463 4356 dbSNP
rs1338251827 4366 dbSNP
rs1178784467 4368 dbSNP
rs753651244 4375 dbSNP
rs373457326 4376 dbSNP
rs1376908234 4380 dbSNP
rs1305900646 4381 dbSNP
rs1010553024 4394 dbSNP
rs561058384 4394 dbSNP
rs761979139 4395 dbSNP
rs902297259 4396 dbSNP
rs1410665607 4399 dbSNP
rs773467988 4402 dbSNP
rs753240162 4406 dbSNP
rs1370836796 4410 dbSNP
rs973368780 4416 dbSNP
rs1202829806 4417 dbSNP
rs1437667004 4420 dbSNP
rs1274309094 4422 dbSNP
rs11557464 4424 dbSNP
rs1333341131 4430 dbSNP
rs919857501 4430 dbSNP
rs1220880065 4433 dbSNP
rs1233390983 4435 dbSNP
rs543598770 4436 dbSNP
rs1049596946 4438 dbSNP
rs1301833049 4439 dbSNP
rs963603468 4440 dbSNP
rs973437836 4444 dbSNP
rs1330646662 4449 dbSNP
rs1393676093 4450 dbSNP
rs911077282 4450 dbSNP
rs919243459 4452 dbSNP
rs1462069709 4453 dbSNP
rs929288840 4464 dbSNP
rs943858594 4465 dbSNP
rs1276145804 4466 dbSNP
rs1284132926 4471 dbSNP
rs1040813610 4472 dbSNP
rs1203309003 4476 dbSNP
rs141389242 4478 dbSNP
rs766114199 4479 dbSNP
rs776433443 4482 dbSNP
rs1193451178 4483 dbSNP
rs1222786394 4487 dbSNP
rs1043075492 4491 dbSNP
rs1454194633 4492 dbSNP
rs904790278 4497 dbSNP
rs559324343 4498 dbSNP
rs1034593992 4501 dbSNP
rs1392090362 4503 dbSNP
rs1054866353 4509 dbSNP
rs1430665076 4510 dbSNP
rs893763385 4516 dbSNP
rs960218010 4517 dbSNP
rs754288176 4518 dbSNP
rs1014429165 4520 dbSNP
rs577905553 4521 dbSNP
rs1293862909 4522 dbSNP
rs528534359 4524 dbSNP
rs183020584 4526 dbSNP
rs1453004877 4528 dbSNP
rs1299193208 4532 dbSNP
rs902181688 4533 dbSNP
rs920561732 4535 dbSNP
rs1194864995 4536 dbSNP
rs953391127 4537 dbSNP
rs1051298728 4541 dbSNP
rs985803164 4543 dbSNP
rs563806593 4547 dbSNP
rs34266331 4548 dbSNP
rs1317102848 4551 dbSNP
rs1007752901 4558 dbSNP
rs1231776317 4559 dbSNP
rs1346956300 4560 dbSNP
rs943910948 4561 dbSNP
rs145300139 4562 dbSNP
rs963658378 4563 dbSNP
rs1468473773 4564 dbSNP
rs1287141091 4568 dbSNP
rs1192246045 4571 dbSNP
rs1249988061 4573 dbSNP
rs1450124937 4576 dbSNP
rs1185979538 4578 dbSNP
rs1345979960 4584 dbSNP
rs995504552 4590 dbSNP
rs912988269 4601 dbSNP
rs12901 4623 dbSNP
rs1394922966 4623 dbSNP
rs145131030 4626 dbSNP
rs1318968730 4627 dbSNP
rs1185399720 4633 dbSNP
rs1165286220 4635 dbSNP
rs1042743674 4637 dbSNP
rs1208369742 4639 dbSNP
rs751051115 4662 dbSNP
rs536622511 4666 dbSNP
rs1485144637 4670 dbSNP
rs959446515 4671 dbSNP
rs990648296 4675 dbSNP
rs915086378 4677 dbSNP
rs541658418 4681 dbSNP
rs946515928 4681 dbSNP
rs1362819061 4683 dbSNP
rs149031766 4685 dbSNP
rs1413089325 4687 dbSNP
rs1056489328 4696 dbSNP
rs1313828501 4709 dbSNP
rs933678067 4721 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293
Disease 23119.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "HITS-CLIP data was present in GSM714642. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 23119.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM714642
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545212
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / Control
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 5 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 6 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUAAGCUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 7 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 8 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
CLIP-seq Support 9 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000407464.2 | 3UTR | CUAAUAUAUUUAUCUCAUUGUUUACAUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
619 hsa-miR-1277-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056754 ARID5B AT-rich interaction domain 5B 2 4
MIRT061744 ATP2B4 ATPase plasma membrane Ca2+ transporting 4 2 2
MIRT061749 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT064112 ERGIC2 ERGIC and golgi 2 2 2
MIRT064651 YAF2 YY1 associated factor 2 2 4
MIRT064836 ZBTB18 zinc finger and BTB domain containing 18 2 4
MIRT067662 ZIC5 Zic family member 5 2 6
MIRT069282 HSP90AA1 heat shock protein 90 alpha family class A member 1 2 6
MIRT070956 ZFP36L1 ZFP36 ring finger protein like 1 2 2
MIRT071145 NUMB NUMB, endocytic adaptor protein 2 2
MIRT074785 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 6
MIRT075264 SNTB2 syntrophin beta 2 2 4
MIRT075446 PSMD7 proteasome 26S subunit, non-ATPase 7 2 6
MIRT076212 ALKBH5 alkB homolog 5, RNA demethylase 2 2
MIRT084669 BTG3 BTG anti-proliferation factor 3 2 6
MIRT087151 HIC2 HIC ZBTB transcriptional repressor 2 2 6
MIRT088873 FOXN2 forkhead box N2 2 12
MIRT093119 SLC7A11 solute carrier family 7 member 11 2 10
MIRT096246 CANX calnexin 2 2
MIRT097122 TNPO1 transportin 1 2 2
MIRT097389 LHFPL2 LHFPL tetraspan subfamily member 2 2 2
MIRT100756 VEGFA vascular endothelial growth factor A 2 4
MIRT100865 CD2AP CD2 associated protein 2 4
MIRT101318 FAM135A family with sequence similarity 135 member A 2 2
MIRT103531 HOXA9 homeobox A9 2 2
MIRT105845 DDHD2 DDHD domain containing 2 2 2
MIRT111511 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT113092 CCND2 cyclin D2 2 4
MIRT116209 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 6
MIRT117356 TGIF1 TGFB induced factor homeobox 1 2 4
MIRT122389 RGMB repulsive guidance molecule family member b 2 4
MIRT126100 USP6NL USP6 N-terminal like 2 10
MIRT163363 PRKCD protein kinase C delta 2 4
MIRT163466 WNT5A Wnt family member 5A 2 4
MIRT164377 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT181785 UHMK1 U2AF homology motif kinase 1 2 4
MIRT182290 POU2F1 POU class 2 homeobox 1 2 2
MIRT193652 RORA RAR related orphan receptor A 2 4
MIRT198842 C18ORF25 chromosome 18 open reading frame 25 2 2
MIRT201466 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT214454 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT223276 TRIM4 tripartite motif containing 4 2 2
MIRT225132 KAT6A lysine acetyltransferase 6A 2 6
MIRT225924 SNX16 sorting nexin 16 2 6
MIRT227867 NFIB nuclear factor I B 2 6
MIRT229421 ZNF275 zinc finger protein 275 2 4
MIRT243203 SERTAD2 SERTA domain containing 2 2 2
MIRT265715 WARS2 tryptophanyl tRNA synthetase 2, mitochondrial 2 2
MIRT267012 ZDHHC5 zinc finger DHHC-type containing 5 2 6
MIRT269383 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT270184 UNG uracil DNA glycosylase 2 6
MIRT271867 ZNF678 zinc finger protein 678 2 2
MIRT273689 HOXC4 homeobox C4 2 8
MIRT274714 CPSF6 cleavage and polyadenylation specific factor 6 2 2
MIRT276556 AKAP11 A-kinase anchoring protein 11 2 2
MIRT277062 NDFIP2 Nedd4 family interacting protein 2 2 4
MIRT277511 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT277911 RBM23 RNA binding motif protein 23 2 4
MIRT282601 IGF1R insulin like growth factor 1 receptor 2 2
MIRT287614 NPEPPS aminopeptidase puromycin sensitive 2 2
MIRT296120 TP53RK TP53 regulating kinase 2 4
MIRT297070 NCK2 NCK adaptor protein 2 2 2
MIRT301453 DDX17 DEAD-box helicase 17 2 2
MIRT302777 ZFP36L2 ZFP36 ring finger protein like 2 2 2
MIRT303262 FBXO48 F-box protein 48 2 4
MIRT308605 ARL13B ADP ribosylation factor like GTPase 13B 2 2
MIRT311040 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT312331 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT312420 GRPEL2 GrpE like 2, mitochondrial 2 2
MIRT313989 TPPP tubulin polymerization promoting protein 2 6
MIRT316901 ATXN1 ataxin 1 2 2
MIRT316955 QKI QKI, KH domain containing RNA binding 2 2
MIRT317931 SLC29A1 solute carrier family 29 member 1 (Augustine blood group) 2 2
MIRT323683 PLEKHF2 pleckstrin homology and FYVE domain containing 2 2 4
MIRT327651 ZXDA zinc finger, X-linked, duplicated A 2 8
MIRT330640 CDK1 cyclin dependent kinase 1 2 2
MIRT331299 TM9SF3 transmembrane 9 superfamily member 3 2 2
MIRT338170 SP1 Sp1 transcription factor 2 6
MIRT359188 F2RL1 F2R like trypsin receptor 1 2 6
MIRT359673 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 4
MIRT362977 CASD1 CAS1 domain containing 1 2 4
MIRT366901 NONO non-POU domain containing octamer binding 2 2
MIRT379801 APOOL apolipoprotein O like 2 6
MIRT395177 ZNF609 zinc finger protein 609 2 2
MIRT403410 RPS7 ribosomal protein S7 2 2
MIRT408867 BACH2 BTB domain and CNC homolog 2 2 8
MIRT441400 SOX5 SRY-box 5 2 8
MIRT441513 AKR1D1 aldo-keto reductase family 1 member D1 2 2
MIRT441661 COCH cochlin 2 2
MIRT441785 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT441968 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT442041 TRPV2 transient receptor potential cation channel subfamily V member 2 2 2
MIRT442718 TNKS tankyrase 2 2
MIRT443365 CSRP1 cysteine and glycine rich protein 1 2 2
MIRT443403 HMX3 H6 family homeobox 3 2 2
MIRT443422 LIN28B lin-28 homolog B 2 4
MIRT443458 ANP32B acidic nuclear phosphoprotein 32 family member B 2 2
MIRT444783 ECE1 endothelin converting enzyme 1 2 2
MIRT444794 TMEM251 transmembrane protein 251 2 2
MIRT444829 POLR1B RNA polymerase I subunit B 2 2
MIRT445040 TRPS1 transcriptional repressor GATA binding 1 2 2
MIRT445146 KLHL23 kelch like family member 23 2 8
MIRT445904 TBX18 T-box 18 2 6
MIRT446322 GM2A GM2 ganglioside activator 2 2
MIRT446772 ATAD5 ATPase family, AAA domain containing 5 2 2
MIRT446996 UBXN2A UBX domain protein 2A 2 2
MIRT447326 ZSCAN21 zinc finger and SCAN domain containing 21 2 2
MIRT447435 FER FER tyrosine kinase 2 2
MIRT447732 DGKH diacylglycerol kinase eta 2 4
MIRT447885 ERI1 exoribonuclease 1 2 2
MIRT448972 CADM2 cell adhesion molecule 2 2 2
MIRT450008 SLC16A6 solute carrier family 16 member 6 2 4
MIRT450383 GUF1 GUF1 homolog, GTPase 2 2
MIRT450752 POLI DNA polymerase iota 2 2
MIRT454744 NDUFB6 NADH:ubiquinone oxidoreductase subunit B6 2 2
MIRT456101 MB21D1 Mab-21 domain containing 1 2 6
MIRT460169 CCL16 C-C motif chemokine ligand 16 2 2
MIRT466574 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT466700 TAF13 TATA-box binding protein associated factor 13 2 4
MIRT467423 SNTB1 syntrophin beta 1 2 4
MIRT467733 SLC38A1 solute carrier family 38 member 1 2 2
MIRT469922 PTPRJ protein tyrosine phosphatase, receptor type J 2 8
MIRT470039 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT472972 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT475057 JMY junction mediating and regulatory protein, p53 cofactor 2 2
MIRT475180 INSIG2 insulin induced gene 2 2 6
MIRT477509 ELL2 elongation factor for RNA polymerase II 2 2 2
MIRT480614 BTF3L4 basic transcription factor 3 like 4 2 2
MIRT480943 BBX BBX, HMG-box containing 2 8
MIRT481533 ARL5B ADP ribosylation factor like GTPase 5B 2 8
MIRT485089 SLC30A1 solute carrier family 30 member 1 2 4
MIRT496317 GCK glucokinase 2 6
MIRT496323 DOCK9 dedicator of cytokinesis 9 2 2
MIRT497792 DTX3L deltex E3 ubiquitin ligase 3L 2 2
MIRT499299 KCNK1 potassium two pore domain channel subfamily K member 1 2 10
MIRT503233 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 10
MIRT503290 XRCC3 X-ray repair cross complementing 3 2 6
MIRT503330 TET2 tet methylcytosine dioxygenase 2 2 10
MIRT503384 ASB11 ankyrin repeat and SOCS box containing 11 2 4
MIRT503397 C11orf74 chromosome 11 open reading frame 74 2 4
MIRT503520 USP51 ubiquitin specific peptidase 51 2 6
MIRT503575 BTBD19 BTB domain containing 19 2 6
MIRT503697 CTLA4 cytotoxic T-lymphocyte associated protein 4 2 8
MIRT503739 GPATCH11 G-patch domain containing 11 2 10
MIRT503813 CARF calcium responsive transcription factor 2 8
MIRT503835 NCAM2 neural cell adhesion molecule 2 2 6
MIRT503857 CSMD1 CUB and Sushi multiple domains 1 2 4
MIRT503891 ELF2 E74 like ETS transcription factor 2 2 6
MIRT503975 C4orf29 abhydrolase domain containing 18 2 10
MIRT504025 CEP104 centrosomal protein 104 2 4
MIRT504134 RAB3B RAB3B, member RAS oncogene family 2 14
MIRT504249 FAM26E calcium homeostasis modulator family member 5 2 8
MIRT504250 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 10
MIRT504298 ZNF318 zinc finger protein 318 2 6
MIRT504343 COPS8 COP9 signalosome subunit 8 2 6
MIRT504357 VCAM1 vascular cell adhesion molecule 1 2 8
MIRT504385 SLC24A2 solute carrier family 24 member 2 2 6
MIRT504454 MIPOL1 mirror-image polydactyly 1 2 6
MIRT504520 BVES blood vessel epicardial substance 2 6
MIRT504582 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 6
MIRT504583 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 2 6
MIRT504607 MMADHC methylmalonic aciduria and homocystinuria, cblD type 2 6
MIRT504659 CYGB cytoglobin 2 4
MIRT504719 PLEKHA6 pleckstrin homology domain containing A6 2 10
MIRT504730 DGKG diacylglycerol kinase gamma 2 10
MIRT504732 GSK3B glycogen synthase kinase 3 beta 2 8
MIRT504770 CLEC2D C-type lectin domain family 2 member D 2 4
MIRT504818 HOXD10 homeobox D10 2 8
MIRT504862 VAMP4 vesicle associated membrane protein 4 2 6
MIRT504925 IMPG2 interphotoreceptor matrix proteoglycan 2 2 10
MIRT504929 CA12 carbonic anhydrase 12 2 6
MIRT505093 ZBED3 zinc finger BED-type containing 3 2 6
MIRT505175 WDR76 WD repeat domain 76 2 4
MIRT505259 RPS27A ribosomal protein S27a 2 6
MIRT505431 TBPL1 TATA-box binding protein like 1 2 8
MIRT505521 SPATA2 spermatogenesis associated 2 2 10
MIRT505743 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT505762 SEC23IP SEC23 interacting protein 2 6
MIRT506023 PUM1 pumilio RNA binding family member 1 2 6
MIRT506055 PPP4R2 protein phosphatase 4 regulatory subunit 2 2 8
MIRT506141 PLEKHA3 pleckstrin homology domain containing A3 2 6
MIRT506169 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 6
MIRT506303 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506404 NRF1 nuclear respiratory factor 1 2 4
MIRT506473 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 6
MIRT506551 MON1B MON1 homolog B, secretory trafficking associated 2 4
MIRT506612 MARCH6 membrane associated ring-CH-type finger 6 2 10
MIRT506723 LPAR3 lysophosphatidic acid receptor 3 2 10
MIRT506734 LMTK2 lemur tyrosine kinase 2 2 8
MIRT506902 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 6
MIRT507175 G3BP2 G3BP stress granule assembly factor 2 2 2
MIRT507399 EMC7 ER membrane protein complex subunit 7 2 8
MIRT507476 E2F8 E2F transcription factor 8 2 6
MIRT507618 CSRNP3 cysteine and serine rich nuclear protein 3 2 8
MIRT507635 CREBZF CREB/ATF bZIP transcription factor 2 6
MIRT507831 CD55 CD55 molecule (Cromer blood group) 2 4
MIRT508102 AMER1 APC membrane recruitment protein 1 2 12
MIRT508195 PTP4A2 protein tyrosine phosphatase type IVA, member 2 2 8
MIRT508255 CD226 CD226 molecule 2 8
MIRT508276 ADCYAP1 adenylate cyclase activating polypeptide 1 2 10
MIRT508325 CCDC38 coiled-coil domain containing 38 2 6
MIRT508364 ITPRIPL1 inositol 1,4,5-trisphosphate receptor interacting protein-like 1 2 10
MIRT508419 MYBL1 MYB proto-oncogene like 1 2 6
MIRT508438 ZNF608 zinc finger protein 608 2 4
MIRT508458 SHOX2 short stature homeobox 2 2 6
MIRT508532 RPP14 ribonuclease P/MRP subunit p14 2 6
MIRT508580 ZNF516 zinc finger protein 516 2 6
MIRT508596 CREB1 cAMP responsive element binding protein 1 2 6
MIRT508630 EIF2B1 eukaryotic translation initiation factor 2B subunit alpha 2 8
MIRT508637 RPL23A ribosomal protein L23a 2 6
MIRT508673 TBX20 T-box 20 2 6
MIRT508679 ENTHD1 ENTH domain containing 1 2 6
MIRT508694 NRIP1 nuclear receptor interacting protein 1 2 8
MIRT508764 ETV6 ETS variant 6 2 8
MIRT508781 CDKL1 cyclin dependent kinase like 1 2 10
MIRT508796 NTRK3 neurotrophic receptor tyrosine kinase 3 2 4
MIRT508841 TMCO1 transmembrane and coiled-coil domains 1 2 4
MIRT508970 MLLT3 MLLT3, super elongation complex subunit 2 6
MIRT508985 DCLRE1C DNA cross-link repair 1C 2 6
MIRT508990 TNFRSF9 TNF receptor superfamily member 9 2 6
MIRT509015 CUL2 cullin 2 2 10
MIRT509021 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 6
MIRT509040 AKAP2 A-kinase anchoring protein 2 2 6
MIRT509076 RABGAP1 RAB GTPase activating protein 1 2 8
MIRT509152 SLC25A27 solute carrier family 25 member 27 2 8
MIRT509176 EFHC1 EF-hand domain containing 1 2 4
MIRT509177 HS2ST1 heparan sulfate 2-O-sulfotransferase 1 2 6
MIRT509180 TSPAN2 tetraspanin 2 2 6
MIRT509220 PYHIN1 pyrin and HIN domain family member 1 2 10
MIRT509241 OTX1 orthodenticle homeobox 1 2 6
MIRT509261 SUCNR1 succinate receptor 1 2 10
MIRT509437 SRP72 signal recognition particle 72 2 10
MIRT509443 POU2F2 POU class 2 homeobox 2 2 6
MIRT509464 TRIM2 tripartite motif containing 2 2 4
MIRT509482 LARP1 La ribonucleoprotein domain family member 1 2 10
MIRT509539 RSBN1L round spermatid basic protein 1 like 2 6
MIRT509604 SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 2 6
MIRT509701 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 4
MIRT509759 KIAA2018 upstream transcription factor family member 3 2 6
MIRT509816 SULT1B1 sulfotransferase family 1B member 1 2 8
MIRT509822 GTPBP2 GTP binding protein 2 2 6
MIRT509829 TACR3 tachykinin receptor 3