miRTarBase - #MIRT091699


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pre-miRNA Information
pre-miRNA hsa-mir-548c   
Genomic Coordinates chr12: 64622509 - 64622605
Description Homo sapiens miR-548c stem-loop
Comment Extensive cloning studies suggest that the 5' miRNA may be the predominant one .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-548c-3p
Sequence 61| CAAAAAUCUCAAUUACUUUUGC |82
Evidence Experimental
Experiments SAGE
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN23013696 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1396767933 3 dbSNP
rs1314622460 7 dbSNP
rs1226739912 9 dbSNP
rs780547012 11 dbSNP
rs747421587 12 dbSNP
rs1298302643 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol TGFBR2   
Synonyms AAT3, FAA3, LDS1B, LDS2, LDS2B, MFS2, RIIC, TAAD2, TGFR-2, TGFbeta-RII
Description transforming growth factor beta receptor 2
Transcript NM_001024847   
Other Transcripts NM_003242   
Expression
Putative miRNA Targets on TGFBR2
3'UTR of TGFBR2
(miRNA target sites are highlighted)		 
>TGFBR2|NM_001024847|3'UTR
   1 CTCTTCTGGGGCAGGCTGGGCCATGTCCAAAGAGGCTGCCCCTCTCACCAAAGAACAGAGGCAGCAGGAAGCTGCCCCTG
  81 AACTGATGCTTCCTGGAAAACCAAGGGGGTCACTCCCCTCCCTGTAAGCTGTGGGGATAAGCAGAAACAACAGCAGCAGG
 161 GAGTGGGTGACATAGAGCATTCTATGCCTTTGACATTGTCATAGGATAAGCTGTGTTAGCACTTCCTCAGGAAATGAGAT
 241 TGATTTTTACAATAGCCAATAACATTTGCACTTTATTAATGCCTGTATATAAATATGAATAGCTATGTTTTATATATATA
 321 TATATATATCTATATATGTCTATAGCTCTATATATATAGCCATACCTTGAAAAGAGACAAGGAAAAACATCAAATATTCC
 401 CAGGAAATTGGTTTTATTGGAGAACTCCAGAACCAAGCAGAGAAGGAAGGGACCCATGACAGCATTAGCATTTGACAATC
 481 ACACATGCAGTGGTTCTCTGACTGTAAAACAGTGAACTTTGCATGAGGAAAGAGGCTCCATGTCTCACAGCCAGCTATGA
 561 CCACATTGCACTTGCTTTTGCAAAATAATCATTCCCTGCCTAGCACTTCTCTTCTGGCCATGGAACTAAGTACAGTGGCA
 641 CTGTTTGAGGACCAGTGTTCCCGGGGTTCCTGTGTGCCCTTATTTCTCCTGGACTTTTCATTTAAGCTCCAAGCCCCAAA
 721 TCTGGGGGGCTAGTTTAGAAACTCTCCCTCAACCTAGTTTAGAAACTCTACCCCATCTTTAATACCTTGAATGTTTTGAA
 801 CCCCACTTTTTACCTTCATGGGTTGCAGAAAAATCAGAACAGATGTCCCCATCCATGCGATTGCCCCACCATCTACTAAT
 881 GAAAAATTGTTCTTTTTTTCATCTTTCCCCTGCACTTATGTTACTATTCTCTGCTCCCAGCCTTCATCCTTTTCTAAAAA
 961 GGAGCAAATTCTCACTCTAGGCTTTATCGTGTTTACTTTTTCATTACACTTGACTTGATTTTCTAGTTTTCTATACAAAC
1041 ACCAATGGGTTCCATCTTTCTGGGCTCCTGATTGCTCAAGCACAGTTTGGCCTGATGAAGAGGATTTCAACTACACAATA
1121 CTATCATTGTCAGGACTATGACCTCAGGCACTCTAAACATATGTTTTGTTTGGTCAGCACAGCGTTTCAAAAAGTGAAGC
1201 CACTTTATAAATATTTGGAGATTTTGCAGGAAAATCTGGATCCCCAGGTAAGGATAGCAGATGGTTTTCAGTTATCTCCA
1281 GTCCACGTTCACAAAATGTGAAGGTGTGGAGACACTTACAAAGCTGCCTCACTTCTCACTGTAAACATTAGCTCTTTCCA
1361 CTGCCTACCTGGACCCCAGTCTAGGAATTAAATCTGCACCTAACCAAGGTCCCTTGTAAGAAATGTCCATTCAAGCAGTC
1441 ATTCTCTGGGTATATAATATGATTTTGACTACCTTATCTGGTGTTAAGATTTGAAGTTGGCCTTTTATTGGACTAAAGGG
1521 GAACTCCTTTAAGGGTCTCAGTTAGCCCAAGTTTCTTTTGCTTATATGTTAATAGTTTTACCCTCTGCATTGGAGAGAGG
1601 AGTGCTTTACTCCAAGAAGCTTTCCTCATGGTTACCGTTCTCTCCATCATGCCAGCCTTCTCAACCTTTGCAGAAATTAC
1681 TAGAGAGGATTTGAATGTGGGACACAAAGGTCCCATTTGCAGTTAGAAAATTTGTGTCCACAAGGACAAGAACAAAGTAT
1761 GAGCTTTAAAACTCCATAGGAAACTTGTTAATCAACAAAGAAGTGTTAATGCTGCAAGTAATCTCTTTTTTAAAACTTTT
1841 TGAAGCTACTTATTTTCAGCCAAATAGGAATATTAGAGAGGGACTGGTAGTGAGAATATCAGCTCTGTTTGGATGGTGGA
1921 AGGTCTCATTTTATTGAGATTTTTAAGATACATGCAAAGGTTTGGAAATAGAACCTCTAGGCACCCTCCTCAGTGTGGGT
2001 GGGCTGAGAGTTAAAGACAGTGTGGCTGCAGTAGCATAGAGGCGCCTAGAAATTCCACTTGCACCGTAGGGCATGCTGAT
2081 ACCATCCCAATAGCTGTTGCCCATTGACCTCTAGTGGTGAGTTTCTAGAATACTGGTCCATTCATGAGATATTCAAGATT
2161 CAAGAGTATTCTCACTTCTGGGTTATCAGCATAAACTGGAATGTAGTGTCAGAGGATACTGTGGCTTGTTTTGTTTATGT
2241 TTTTTTTTCTTATTCAAGAAAAAAGACCAAGGAATAACATTCTGTAGTTCCTAAAAATACTGACTTTTTTCACTACTATA
2321 CATAAAGGGAAAGTTTTATTCTTTTATGGAACACTTCAGCTGTACTCATGTATTAAAATAGGAATGTGAATGCTATATAC
2401 TCTTTTTATATCAAAAGTCTCAAGCACTTATTTTTATTCTATGCATTGTTTGTCTTTTACATAAATAAAATGTTTATTAG
2481 ATTGAATAAAGCAAAATACTCAGGTGAGCATCCTGCCTCCTGTTCCCATTCCTAGTAGCTAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cguuuucAUUAACUCUAAAAAc 5'
                 | |||||||||||| 
Target 5' tctcattTTATTGAGATTTTTa 3'
 1924 - 1945 167.00 -9.90
2 
miRNA  3' cgUUUUCAUUAA-CUCUAAAAac 5'
            | || || || ||||||||  
Target 5' ttATAAATATTTGGAGATTTTgc 3'
 1205 - 1227 148.00 -7.20
3 
miRNA  3' cgUUUUCAUUAACU---CUAAAaac 5'
            :||| || | ||   |||||   
Target 5' caGAAATTACTAGAGAGGATTTgaa 3'
 1671 - 1695 120.00 -5.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
259009 12 ClinVar
344664 34 ClinVar
344665 87 ClinVar
344666 106 ClinVar
344667 150 ClinVar
344668 227 ClinVar
1183809 311 ClinVar
344669 311 ClinVar
344670 313 ClinVar
344671 329 ClinVar
344672 329 ClinVar
344673 331 ClinVar
344674 353 ClinVar
901441 408 ClinVar
344675 444 ClinVar
902006 580 ClinVar
344676 599 ClinVar
344677 600 ClinVar
344678 705 ClinVar
344679 714 ClinVar
344680 743 ClinVar
344681 748 ClinVar
344682 794 ClinVar
344683 800 ClinVar
902007 821 ClinVar
344684 836 ClinVar
344685 849 ClinVar
344686 859 ClinVar
344687 860 ClinVar
344688 989 ClinVar
344689 990 ClinVar
344690 998 ClinVar
344691 1076 ClinVar
344692 1202 ClinVar
900344 1208 ClinVar
344693 1212 ClinVar
344694 1286 ClinVar
344695 1327 ClinVar
900345 1328 ClinVar
344696 1355 ClinVar
900346 1466 ClinVar
344697 1508 ClinVar
344698 1522 ClinVar
344699 1573 ClinVar
901497 1638 ClinVar
344700 1683 ClinVar
901498 1716 ClinVar
344701 1810 ClinVar
344702 1816 ClinVar
344703 1834 ClinVar
344704 1843 ClinVar
344705 1860 ClinVar
344706 1861 ClinVar
344707 1881 ClinVar
344708 1887 ClinVar
344709 1888 ClinVar
902068 1888 ClinVar
902069 1967 ClinVar
344710 1999 ClinVar
344711 2066 ClinVar
344712 2067 ClinVar
344713 2086 ClinVar
344714 2240 ClinVar
344715 2333 ClinVar
344716 2336 ClinVar
344717 2341 ClinVar
344718 2426 ClinVar
344719 2438 ClinVar
344720 2484 ClinVar
COSN31601365 42 COSMIC
COSN30526414 43 COSMIC
COSN30165984 59 COSMIC
COSN30181787 75 COSMIC
COSN30110402 98 COSMIC
COSN31519549 171 COSMIC
COSN1945906 202 COSMIC
COSN31546612 293 COSMIC
COSN31592766 309 COSMIC
COSN23283953 312 COSMIC
COSN20098257 329 COSMIC
COSN30175187 562 COSMIC
COSN6426623 683 COSMIC
COSN22421885 1057 COSMIC
COSN20170328 1263 COSMIC
COSN15839801 1288 COSMIC
COSN22517147 1453 COSMIC
COSN20739924 1539 COSMIC
COSN30109943 1555 COSMIC
COSN8489100 1628 COSMIC
COSN19412090 1630 COSMIC
COSN21432166 1748 COSMIC
COSN22416830 1749 COSMIC
COSN26465751 1754 COSMIC
COSN26640732 1797 COSMIC
COSN9547763 1801 COSMIC
COSN31484301 1826 COSMIC
COSN16606138 2007 COSMIC
COSN15660001 2009 COSMIC
COSN7605636 2017 COSMIC
COSN23849468 2057 COSMIC
COSN31527781 2157 COSMIC
COSN31540640 2190 COSMIC
COSN20098258 2249 COSMIC
COSN32064864 2250 COSMIC
COSN14847545 2273 COSMIC
COSN14461379 2301 COSMIC
COSN23271800 2376 COSMIC
COSN29671635 2385 COSMIC
COSN31601219 2436 COSMIC
COSN31543940 2469 COSMIC
rs6550008 1810 GWAS
rs542768261 2241 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1017849203 6 dbSNP
rs1273676501 9 dbSNP
rs766751602 11 dbSNP
rs886038529 12 dbSNP
rs374127951 21 dbSNP
rs760055355 24 dbSNP
rs767870504 25 dbSNP
rs752848507 26 dbSNP
rs1235230055 30 dbSNP
rs1472143868 31 dbSNP
rs369578953 33 dbSNP
rs886058306 34 dbSNP
rs1463497403 35 dbSNP
rs1157368447 38 dbSNP
rs778145481 39 dbSNP
rs1421581888 40 dbSNP
rs1382990356 42 dbSNP
rs754109749 43 dbSNP
rs758188328 49 dbSNP
rs945172116 51 dbSNP
rs1294004676 53 dbSNP
rs1416259010 60 dbSNP
rs558371189 63 dbSNP
rs976284576 70 dbSNP
rs376307349 76 dbSNP
rs1173248670 77 dbSNP
rs1043691434 84 dbSNP
rs1236170528 85 dbSNP
rs1355612472 86 dbSNP
rs540602629 87 dbSNP
rs1286155859 90 dbSNP
rs1215409729 101 dbSNP
rs565436114 102 dbSNP
rs149112005 106 dbSNP
rs554379684 110 dbSNP
rs1277743975 119 dbSNP
rs909244919 121 dbSNP
rs574343493 132 dbSNP
rs1216101880 135 dbSNP
rs1296276769 137 dbSNP
rs772416591 146 dbSNP
rs1311508550 148 dbSNP
rs143024112 150 dbSNP
rs1038733315 152 dbSNP
rs1037221349 153 dbSNP
rs1417973672 161 dbSNP
rs1351765692 165 dbSNP
rs1165766168 166 dbSNP
rs1215460305 167 dbSNP
rs1405127060 170 dbSNP
rs556791298 172 dbSNP
rs905112714 173 dbSNP
rs1173417122 183 dbSNP
rs776094473 186 dbSNP
rs1263126523 193 dbSNP
rs1056315374 204 dbSNP
rs896297308 206 dbSNP
rs995619926 212 dbSNP
rs1248084651 214 dbSNP
rs1433150728 215 dbSNP
rs1009344028 216 dbSNP
rs201873824 216 dbSNP
rs1221938269 221 dbSNP
rs886058307 227 dbSNP
rs1320860965 243 dbSNP
rs113220101 251 dbSNP
rs1174519731 255 dbSNP
rs17026326 266 dbSNP
rs1435344463 284 dbSNP
rs1020704109 286 dbSNP
rs1027228579 290 dbSNP
rs1318461187 298 dbSNP
rs1277494150 303 dbSNP
rs903556065 306 dbSNP
rs1369893015 308 dbSNP
rs199931498 308 dbSNP
rs1426714901 311 dbSNP
rs1436075056 311 dbSNP
rs35934901 311 dbSNP
rs4016180 311 dbSNP
rs749731499 311 dbSNP
rs750106981 311 dbSNP
rs886058308 311 dbSNP
rs890034029 311 dbSNP
rs1289198186 312 dbSNP
rs576840706 313 dbSNP
rs1385028052 314 dbSNP
rs1487927672 315 dbSNP
rs1017654012 319 dbSNP
rs1250787537 323 dbSNP
rs1382273221 323 dbSNP
rs1257331121 325 dbSNP
rs965002821 326 dbSNP
rs1017659107 327 dbSNP
rs965840165 327 dbSNP
rs998152788 327 dbSNP
rs1491341550 329 dbSNP
rs561991238 329 dbSNP
rs886058309 329 dbSNP
rs886058310 329 dbSNP
rs304840 331 dbSNP
rs1348064369 333 dbSNP
rs983532577 335 dbSNP
rs1400116250 343 dbSNP
rs1296928894 346 dbSNP
rs909297012 347 dbSNP
rs780253858 349 dbSNP
rs963393357 351 dbSNP
rs565524213 353 dbSNP
rs927259280 361 dbSNP
rs1180186744 370 dbSNP
rs1440071411 371 dbSNP
rs937964183 375 dbSNP
rs527890008 377 dbSNP
rs1056766659 386 dbSNP
rs1193981725 394 dbSNP
rs1484165485 396 dbSNP
rs1243082510 403 dbSNP
rs1256545979 405 dbSNP
rs917786105 408 dbSNP
rs990851603 409 dbSNP
rs1189989804 416 dbSNP
rs1255435138 418 dbSNP
rs917889748 428 dbSNP
rs188599299 444 dbSNP
rs1398189846 452 dbSNP
rs1158099129 475 dbSNP
rs1380445714 477 dbSNP
rs1042201572 481 dbSNP
rs1037553607 496 dbSNP
rs903611689 497 dbSNP
rs1433548593 499 dbSNP
rs1000994012 503 dbSNP
rs1038715133 513 dbSNP
rs575460370 522 dbSNP
rs900146685 525 dbSNP
rs1419982072 529 dbSNP
rs997804974 532 dbSNP
rs1179342811 535 dbSNP
rs764512230 537 dbSNP
rs1256696847 539 dbSNP
rs1160041326 558 dbSNP
rs950923306 560 dbSNP
rs193049270 566 dbSNP
rs1005011226 567 dbSNP
rs1217469342 573 dbSNP
rs1353211321 576 dbSNP
rs1259191128 580 dbSNP
rs1349101904 583 dbSNP
rs886058311 599 dbSNP
rs79755385 600 dbSNP
rs1322759911 601 dbSNP
rs1327912822 607 dbSNP
rs1371614435 611 dbSNP
rs754062251 612 dbSNP
rs1352996790 621 dbSNP
rs980573016 634 dbSNP
rs927339769 638 dbSNP
rs890048815 639 dbSNP
rs1156455741 642 dbSNP
rs1007072634 644 dbSNP
rs960301166 647 dbSNP
rs1368902572 661 dbSNP
rs1474158650 662 dbSNP
rs992123682 663 dbSNP
rs1194395744 664 dbSNP
rs1259898822 667 dbSNP
rs1445454096 673 dbSNP
rs1211927662 687 dbSNP
rs886058312 705 dbSNP
rs886058313 714 dbSNP
rs1374819109 715 dbSNP
rs1224009729 719 dbSNP
rs1231868151 725 dbSNP
rs1320570153 727 dbSNP
rs1279389482 730 dbSNP
rs17026328 743 dbSNP
rs1325401533 744 dbSNP
rs11466531 748 dbSNP
rs1042256388 749 dbSNP
rs1324929639 751 dbSNP
rs1021161029 754 dbSNP
rs966409227 765 dbSNP
rs1275649625 766 dbSNP
rs925082009 767 dbSNP
rs1475123341 773 dbSNP
rs1371449572 784 dbSNP
rs532320111 788 dbSNP
rs936455098 789 dbSNP
rs1201251257 793 dbSNP
rs886058314 794 dbSNP
rs1452354210 795 dbSNP
rs886058315 800 dbSNP
rs1039181102 805 dbSNP
rs542944964 819 dbSNP
rs765340266 820 dbSNP
rs1259248325 821 dbSNP
rs997588634 830 dbSNP
rs979265792 835 dbSNP
rs17026332 836 dbSNP
rs959297507 838 dbSNP
rs1234827645 840 dbSNP
rs1178000235 845 dbSNP
rs1302255055 847 dbSNP
rs1438428734 847 dbSNP
rs991169798 848 dbSNP
rs17026336 849 dbSNP
rs1403447589 851 dbSNP
rs142745018 859 dbSNP
rs548242538 860 dbSNP
rs568093577 876 dbSNP
rs111802426 882 dbSNP
rs1001658526 884 dbSNP
rs1192048718 886 dbSNP
rs537031470 894 dbSNP
rs779977871 908 dbSNP
rs557034249 909 dbSNP
rs1204299109 911 dbSNP
rs1281356736 913 dbSNP
rs1442298452 914 dbSNP
rs1201618359 917 dbSNP
rs1348053486 920 dbSNP
rs751447751 928 dbSNP
rs992832388 932 dbSNP
rs1378809632 933 dbSNP
rs1309651142 936 dbSNP
rs574969117 938 dbSNP
rs1333840790 943 dbSNP
rs942868862 944 dbSNP
rs1041727498 948 dbSNP
rs754796336 962 dbSNP
rs781028203 963 dbSNP
rs901420546 974 dbSNP
rs1171971413 976 dbSNP
rs1376487813 977 dbSNP
rs1020265876 978 dbSNP
rs1042019589 980 dbSNP
rs1295529732 980 dbSNP
rs1468939326 982 dbSNP
rs1335847197 987 dbSNP
rs138036906 989 dbSNP
rs886058316 990 dbSNP
rs1256253084 991 dbSNP
rs886058317 998 dbSNP
rs977982781 1004 dbSNP
rs141927808 1008 dbSNP
rs936493503 1009 dbSNP
rs1348343686 1010 dbSNP
rs1285873162 1018 dbSNP
rs974557787 1031 dbSNP
rs1415363637 1034 dbSNP
rs1474367330 1039 dbSNP
rs921679311 1043 dbSNP
rs933052167 1046 dbSNP
rs1311106061 1055 dbSNP
rs1418327700 1060 dbSNP
rs867518387 1061 dbSNP
rs1032078778 1064 dbSNP
rs959222979 1066 dbSNP
rs1158733102 1068 dbSNP
rs544093849 1076 dbSNP
rs1416463639 1077 dbSNP
rs1168533588 1078 dbSNP
rs886083788 1079 dbSNP
rs540744767 1091 dbSNP
rs1256059326 1097 dbSNP
rs541755564 1109 dbSNP
rs1332891230 1118 dbSNP
rs1242325002 1122 dbSNP
rs551488937 1130 dbSNP
rs1356889948 1139 dbSNP
rs1445031813 1142 dbSNP
rs541286856 1145 dbSNP
rs185269441 1151 dbSNP
rs1233695540 1156 dbSNP
rs1313046852 1159 dbSNP
rs918563043 1160 dbSNP
rs1291381846 1169 dbSNP
rs1220533514 1173 dbSNP
rs1362834208 1174 dbSNP
rs1288480049 1175 dbSNP
rs1428947626 1181 dbSNP
rs1351860877 1182 dbSNP
rs1324571889 1184 dbSNP
rs34773126 1189 dbSNP
rs899367726 1194 dbSNP
rs1416255031 1197 dbSNP
rs1002109310 1199 dbSNP
rs1173524596 1202 dbSNP
rs886058318 1202 dbSNP
rs886058319 1212 dbSNP
rs373324838 1229 dbSNP
rs952695730 1235 dbSNP
rs1419656205 1236 dbSNP
rs1185546988 1238 dbSNP
rs1268983739 1249 dbSNP
rs984198290 1253 dbSNP
rs1034485069 1258 dbSNP
rs1214031933 1261 dbSNP
rs1467916540 1263 dbSNP
rs1342051112 1270 dbSNP
rs1271195654 1271 dbSNP
rs1215627401 1282 dbSNP
rs1200496795 1283 dbSNP
rs574876197 1286 dbSNP
rs1014322955 1288 dbSNP
rs1020318200 1299 dbSNP
rs967356648 1301 dbSNP
rs879215063 1304 dbSNP
rs922851130 1305 dbSNP
rs1304457242 1307 dbSNP
rs1440612851 1313 dbSNP
rs376278596 1318 dbSNP
rs886058320 1327 dbSNP
rs1333912666 1332 dbSNP
rs978036900 1336 dbSNP
rs866188301 1346 dbSNP
rs747808681 1347 dbSNP
rs11466532 1355 dbSNP
rs902207012 1358 dbSNP
rs974988203 1363 dbSNP
rs921759545 1364 dbSNP
rs933084545 1370 dbSNP
rs1250962239 1373 dbSNP
rs894893271 1376 dbSNP
rs1012497805 1389 dbSNP
rs1250693828 1410 dbSNP
rs563297176 1416 dbSNP
rs150669594 1417 dbSNP
rs1202453218 1425 dbSNP
rs987164326 1426 dbSNP
rs1314079227 1428 dbSNP
rs552020910 1433 dbSNP
rs940356068 1434 dbSNP
rs1475716513 1441 dbSNP
rs1233891087 1454 dbSNP
rs1024775756 1455 dbSNP
rs1171877784 1466 dbSNP
rs1311850364 1472 dbSNP
rs1392739252 1474 dbSNP
rs1392363445 1492 dbSNP
rs1373171568 1502 dbSNP
rs139938413 1508 dbSNP
rs994121914 1510 dbSNP
rs1376792015 1519 dbSNP
rs11466533 1522 dbSNP
rs937576400 1531 dbSNP
rs952747946 1534 dbSNP
rs1056384284 1540 dbSNP
rs571220771 1540 dbSNP
rs984082460 1543 dbSNP
rs911308054 1546 dbSNP
rs1249713417 1556 dbSNP
rs1359483050 1558 dbSNP
rs190586104 1563 dbSNP
rs866542579 1565 dbSNP
rs182312262 1569 dbSNP
rs878857301 1573 dbSNP
rs1345942265 1574 dbSNP
rs1288428070 1583 dbSNP
rs1041813805 1600 dbSNP
rs1328517121 1601 dbSNP
rs774680263 1616 dbSNP
rs903224403 1617 dbSNP
rs1274715348 1621 dbSNP
rs1316769884 1629 dbSNP
rs1305458601 1636 dbSNP
rs536790333 1637 dbSNP
rs1032978663 1638 dbSNP
rs1312914155 1645 dbSNP
rs550697408 1648 dbSNP
rs1413636495 1661 dbSNP
rs1373180375 1665 dbSNP
rs1159998029 1666 dbSNP
rs1236573891 1670 dbSNP
rs1363051737 1672 dbSNP
rs17026341 1683 dbSNP
rs1353217114 1689 dbSNP
rs1050836 1690 dbSNP
rs1476116737 1698 dbSNP
rs1418524269 1699 dbSNP
rs1203569812 1703 dbSNP
rs1187225034 1704 dbSNP
rs770496087 1708 dbSNP
rs149862574 1710 dbSNP
rs559265897 1716 dbSNP
rs1205991648 1717 dbSNP
rs1485736021 1721 dbSNP
rs1259281525 1730 dbSNP
rs954532812 1735 dbSNP
rs185309141 1747 dbSNP
rs1336018590 1753 dbSNP
rs907629929 1760 dbSNP
rs1232135038 1777 dbSNP
rs1353095204 1780 dbSNP
rs372437429 1788 dbSNP
rs1251056880 1798 dbSNP
rs1319846088 1803 dbSNP
rs1383813475 1810 dbSNP
rs6550008 1810 dbSNP
rs1173683305 1815 dbSNP
rs146296952 1816 dbSNP
rs936363058 1824 dbSNP
rs1164211094 1826 dbSNP
rs1474251185 1827 dbSNP
rs1374914104 1832 dbSNP
rs1803446 1834 dbSNP
rs1428100949 1837 dbSNP
rs894897412 1838 dbSNP
rs886058321 1843 dbSNP
rs1215883358 1857 dbSNP
rs886058322 1860 dbSNP
rs886058323 1861 dbSNP
rs1469234511 1869 dbSNP
rs1273100962 1880 dbSNP
rs11466534 1881 dbSNP
rs11466535 1887 dbSNP
rs886058324 1888 dbSNP
rs1227555053 1891 dbSNP
rs1325418848 1892 dbSNP
rs576800011 1898 dbSNP
rs17026348 1899 dbSNP
rs1443242623 1902 dbSNP
rs1325117086 1906 dbSNP
rs1459768701 1917 dbSNP
rs993952963 1922 dbSNP
rs1025554558 1923 dbSNP
rs1376185486 1939 dbSNP
rs1371544752 1949 dbSNP
rs1237167960 1950 dbSNP
rs950194562 1953 dbSNP
rs1041868350 1958 dbSNP
rs888322380 1961 dbSNP
rs1192174415 1968 dbSNP
rs1440017875 1981 dbSNP
rs1274324019 1986 dbSNP
rs188109487 1988 dbSNP
rs1338244861 1993 dbSNP
rs886058325 1999 dbSNP
rs777022596 2001 dbSNP
rs1018198794 2007 dbSNP
rs1054883228 2022 dbSNP
rs1371311512 2037 dbSNP
rs964492654 2038 dbSNP
rs1438448248 2039 dbSNP
rs899813691 2040 dbSNP
rs762042637 2041 dbSNP
rs1030149854 2042 dbSNP
rs528412925 2043 dbSNP
rs967607035 2044 dbSNP
rs548360294 2045 dbSNP
rs996525456 2046 dbSNP
rs1028902817 2053 dbSNP
rs1394468788 2065 dbSNP
rs11466536 2066 dbSNP
rs566913021 2067 dbSNP
rs989159795 2068 dbSNP
rs916225952 2069 dbSNP
rs1233949972 2072 dbSNP
rs1181771449 2077 dbSNP
rs947696985 2078 dbSNP
rs11466537 2086 dbSNP
rs906272430 2091 dbSNP
rs961784109 2102 dbSNP
rs766443493 2103 dbSNP
rs1352658250 2109 dbSNP
rs1392682105 2110 dbSNP
rs1238302126 2113 dbSNP
rs1463492930 2115 dbSNP
rs1327092064 2121 dbSNP
rs1415476347 2129 dbSNP
rs1375011102 2137 dbSNP
rs929813701 2139 dbSNP
rs1402800046 2149 dbSNP
rs751511142 2149 dbSNP
rs1409241542 2152 dbSNP
rs920282415 2156 dbSNP
rs1420663490 2158 dbSNP
rs1469022053 2158 dbSNP
rs1309497431 2159 dbSNP
rs1336553819 2164 dbSNP
rs1244285266 2172 dbSNP
rs1207638375 2174 dbSNP
rs1448494049 2175 dbSNP
rs1284630521 2181 dbSNP
rs913407470 2229 dbSNP
rs947525889 2234 dbSNP
rs1223028884 2236 dbSNP
rs1043304936 2238 dbSNP
rs1336606092 2239 dbSNP
rs1164391055 2240 dbSNP
rs1282623826 2240 dbSNP
rs1358456459 2240 dbSNP
rs34914516 2240 dbSNP
rs888374612 2248 dbSNP
rs900737881 2250 dbSNP
rs1257342936 2253 dbSNP
rs570583391 2255 dbSNP
rs1479406829 2256 dbSNP
rs1317994448 2262 dbSNP
rs1399340455 2271 dbSNP
rs958389514 2272 dbSNP
rs992187885 2283 dbSNP
rs1197015190 2289 dbSNP
rs1166377802 2291 dbSNP
rs1475232883 2294 dbSNP
rs917507797 2300 dbSNP
rs1416587256 2311 dbSNP
rs11556633 2317 dbSNP
rs865849202 2319 dbSNP
rs886058326 2333 dbSNP
rs1207921070 2334 dbSNP
rs886058327 2336 dbSNP
rs1250850840 2339 dbSNP
rs886058328 2341 dbSNP
rs1214736934 2342 dbSNP
rs1005400798 2349 dbSNP
rs532935529 2354 dbSNP
rs1214285895 2358 dbSNP
rs1334100088 2364 dbSNP
rs546652502 2369 dbSNP
rs1416159102 2371 dbSNP
rs1362853559 2400 dbSNP
rs1269894368 2401 dbSNP
rs1433349073 2403 dbSNP
rs1373703229 2406 dbSNP
rs924751305 2407 dbSNP
rs936107923 2411 dbSNP
rs1392953347 2415 dbSNP
rs1162004406 2419 dbSNP
rs886058329 2426 dbSNP
rs1419771900 2432 dbSNP
rs1185638932 2436 dbSNP
rs886058330 2438 dbSNP
rs1447399525 2441 dbSNP
rs1166372828 2445 dbSNP
rs1254597364 2446 dbSNP
rs1272332599 2446 dbSNP
rs1194062753 2447 dbSNP
rs1467925911 2448 dbSNP
rs1029789160 2449 dbSNP
rs1263626922 2455 dbSNP
rs566359371 2462 dbSNP
rs1206706562 2483 dbSNP
rs79535432 2484 dbSNP
rs774000972 2489 dbSNP
rs932668855 2492 dbSNP
rs1460573343 2494 dbSNP
rs1051499238 2497 dbSNP
rs890381329 2504 dbSNP
rs1350347882 2506 dbSNP
rs1299934849 2510 dbSNP
rs1008741461 2520 dbSNP
rs1397242616 2523 dbSNP
rs1033150612 2525 dbSNP
rs1311222691 2529 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545217. RNA binding protein: AGO2. Condition:miR-7 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 7048.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM545217
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-7 transfection
Location of target site ENST00000359013.4 | 3UTR | AUUUUUACAAUAGCCAAUAACAUUUGCACUUUAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000359013.4 | 3UTR | ACAAUAGCCAAUAACAUUUGCACUUUAUUAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE38974 Chronic obstructive pulmonary disease -0.699 5.1e-5 -0.636 3.2e-4 25 Click to see details
GSE28544 Breast cancer -0.563 2.1e-3 -0.361 4.2e-2 24 Click to see details
GSE19783 ER- ER- breast cancer -0.292 4.5e-3 -0.306 3.0e-3 79 Click to see details
GSE38226 Liver fibrosis 0.417 3.0e-2 0.602 1.9e-3 21 Click to see details
GSE19350 CNS germ cell tumors 0.543 3.4e-2 0.615 1.7e-2 12 Click to see details
GSE14794 Lymphoblastoid cells -0.192 3.5e-2 -0.216 2.0e-2 90 Click to see details
GSE19536 Breast cancer -0.165 5.0e-2 -0.213 1.7e-2 100 Click to see details
GSE27834 Pluripotent stem cells 0.383 7.2e-2 0.385 7.0e-2 16 Click to see details
GSE28260 Renal cortex and medulla 0.381 9.9e-2 0.271 1.9e-1 13 Click to see details
GSE21032 Prostate cancer -0.138 1.1e-1 -0.144 9.7e-2 83 Click to see details
GSE42095 Differentiated embryonic stem cells -0.25 1.2e-1 -0.329 6.3e-2 23 Click to see details
GSE21687 Ependynoma primary tumors -0.132 1.5e-1 -0.167 9.4e-2 64 Click to see details
GSE19783 ER+ ER+ breast cancer 0.146 2.7e-1 0.221 1.7e-1 20 Click to see details
GSE35602 Colorectal cancer stromal tissue -0.122 2.8e-1 0.027 4.5e-1 25 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.136 2.8e-1 -0.179 2.3e-1 20 Click to see details
GSE17498 Multiple myeloma -0.075 3.2e-1 -0.051 3.8e-1 40 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.161 3.5e-1 0.262 2.7e-1 8 Click to see details
GSE21849 B cell lymphoma -0.073 3.5e-1 -0.140 2.3e-1 29 Click to see details
GSE32688 Pancreatic cancer -0.059 3.7e-1 0.146 2.1e-1 32 Click to see details
GSE26953 Aortic valvular endothelial cells -0.042 4.2e-1 0.007 4.9e-1 24 Click to see details
GSE17306 Multiple myeloma 0.021 4.4e-1 0.095 2.6e-1 49 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
459 hsa-miR-548c-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055126 SCD stearoyl-CoA desaturase 2 2
MIRT055360 PDCD4 programmed cell death 4 2 2
MIRT057340 PANK1 pantothenate kinase 1 2 2
MIRT058532 PRDM10 PR/SET domain 10 2 2
MIRT064700 CCND2 cyclin D2 2 4
MIRT068070 SPATA13 spermatogenesis associated 13 2 4
MIRT069438 CDCA4 cell division cycle associated 4 2 4
MIRT070546 EXOC5 exocyst complex component 5 2 2
MIRT070866 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT071492 CALM1 calmodulin 1 2 6
MIRT077694 ZNF652 zinc finger protein 652 2 2
MIRT078290 RPS6KB1 ribosomal protein S6 kinase B1 2 2
MIRT080233 SMAD4 SMAD family member 4 2 6
MIRT080612 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT081130 LDLR low density lipoprotein receptor 2 6
MIRT083622 NCOA3 nuclear receptor coactivator 3 2 2
MIRT088674 EML4 echinoderm microtubule associated protein like 4 2 4
MIRT089617 MAT2A methionine adenosyltransferase 2A 2 2
MIRT091138 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT091699 TGFBR2 transforming growth factor beta receptor 2 2 4
MIRT093590 SPCS3 signal peptidase complex subunit 3 2 2
MIRT096243 CANX calnexin 2 2
MIRT099747 SOX4 SRY-box 4 2 6
MIRT101977 EPHA7 EPH receptor A7 2 4
MIRT102959 EN2 engrailed homeobox 2 2 4
MIRT107464 NFIB nuclear factor I B 2 2
MIRT107876 FXN frataxin 2 2
MIRT110174 ZNF711 zinc finger protein 711 2 2
MIRT115410 UNKL unkempt family like zinc finger 2 4
MIRT121611 LMNB1 lamin B1 2 2
MIRT130394 PTPRJ protein tyrosine phosphatase, receptor type J 2 2
MIRT134673 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT142311 RBBP6 RB binding protein 6, ubiquitin ligase 2 2
MIRT165349 AFF4 AF4/FMR2 family member 4 2 2
MIRT165649 DCTN4 dynactin subunit 4 2 2
MIRT166971 FCHO2 FCH domain only 2 2 2
MIRT176163 PGK1 phosphoglycerate kinase 1 2 2
MIRT181740 UHMK1 U2AF homology motif kinase 1 2 4
MIRT186876 CCNT1 cyclin T1 2 2
MIRT187285 DAZAP2 DAZ associated protein 2 2 2
MIRT188824 TMTC3 transmembrane and tetratricopeptide repeat containing 3 2 4
MIRT196761 CRLF3 cytokine receptor like factor 3 2 2
MIRT200994 ZNF805 zinc finger protein 805 2 4
MIRT203681 DIP2A disco interacting protein 2 homolog A 2 2
MIRT206304 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT208377 SLC25A36 solute carrier family 25 member 36 2 2
MIRT211083 C4ORF32 family with sequence similarity 241 member A 2 2
MIRT211231 FGF2 fibroblast growth factor 2 2 6
MIRT212651 SH3BP2 SH3 domain binding protein 2 2 2
MIRT217310 FOXO3 forkhead box O3 2 2
MIRT218910 GLO1 glyoxalase I 2 4
MIRT223962 TRPS1 transcriptional repressor GATA binding 1 2 2
MIRT242382 TMC5 transmembrane channel like 5 2 2
MIRT262836 CCDC6 coiled-coil domain containing 6 2 2
MIRT264533 TARDBP TAR DNA binding protein 2 6
MIRT273412 SLC11A2 solute carrier family 11 member 2 2 2
MIRT274711 CPSF6 cleavage and polyadenylation specific factor 6 2 2
MIRT275277 NUDT4 nudix hydrolase 4 2 2
MIRT298516 SPOPL speckle type BTB/POZ protein like 2 2
MIRT298567 BRWD1 bromodomain and WD repeat domain containing 1 2 2
MIRT302422 CLIP4 CAP-Gly domain containing linker protein family member 4 2 4
MIRT320613 ZNRF2 zinc and ring finger 2 2 2
MIRT320791 PURB purine rich element binding protein B 2 2
MIRT322922 LYN LYN proto-oncogene, Src family tyrosine kinase 2 2
MIRT340714 MZT1 mitotic spindle organizing protein 1 2 2
MIRT347234 GATAD2A GATA zinc finger domain containing 2A 2 2
MIRT348559 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT354233 STARD7 StAR related lipid transfer domain containing 7 2 2
MIRT354310 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT358523 HNRNPAB heterogeneous nuclear ribonucleoprotein A/B 2 2
MIRT362352 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT363825 GOLGA7 golgin A7 2 2
MIRT367234 RPL5 ribosomal protein L5 2 6
MIRT368206 ADIPOR2 adiponectin receptor 2 2 2
MIRT372013 IGF2BP3 insulin like growth factor 2 mRNA binding protein 3 2 4
MIRT374304 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT377387 TMCC1 transmembrane and coiled-coil domain family 1 2 2
MIRT379837 USP6NL USP6 N-terminal like 2 8
MIRT392413 RREB1 ras responsive element binding protein 1 2 4
MIRT395591 BMPR2 bone morphogenetic protein receptor type 2 2 2
MIRT400810 CPEB2 cytoplasmic polyadenylation element binding protein 2 2 2
MIRT401743 HLA-DRA major histocompatibility complex, class II, DR alpha 2 2
MIRT408462 MTX3 metaxin 3 2 2
MIRT441521 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT442173 AZF1 azoospermia factor 1 2 2
MIRT443086 ABLIM1 actin binding LIM protein 1 2 2
MIRT443391 CHML CHM like, Rab escort protein 2 2 2
MIRT443459 ANP32B acidic nuclear phosphoprotein 32 family member B 2 6
MIRT443653 MRAS muscle RAS oncogene homolog 2 2
MIRT443718 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT443963 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT444249 CTNND1 catenin delta 1 2 2
MIRT444795 TMEM251 transmembrane protein 251 2 2
MIRT444943 HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 2 2
MIRT445180 ORMDL1 ORMDL sphingolipid biosynthesis regulator 1 2 2
MIRT445334 CWC27 CWC27 spliceosome associated protein homolog 2 2
MIRT445707 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 2
MIRT446048 TPR translocated promoter region, nuclear basket protein 2 2
MIRT446091 ENAH ENAH, actin regulator 2 2
MIRT446236 FZD6 frizzled class receptor 6 2 4
MIRT446543 GOLGA8B golgin A8 family member B 2 2
MIRT446592 FBXO40 F-box protein 40 2 2
MIRT446741 MYEF2 myelin expression factor 2 2 2
MIRT446775 ATAD5 ATPase family, AAA domain containing 5 2 2
MIRT447451 ADM adrenomedullin 2 2
MIRT447801 EPC2 enhancer of polycomb homolog 2 2 2
MIRT448179 IL1RAP interleukin 1 receptor accessory protein 2 4
MIRT448773 GOLGA8A golgin A8 family member A 2 2
MIRT449473 HAT1 histone acetyltransferase 1 2 2
MIRT449635 ELAVL4 ELAV like RNA binding protein 4 2 2
MIRT450237 CDKN2AIP CDKN2A interacting protein 2 2
MIRT450379 TMPRSS15 transmembrane protease, serine 15 2 2
MIRT450506 ALPK3 alpha kinase 3 2 2
MIRT451500 FOPNL FGFR1OP N-terminal like 2 2
MIRT452105 NUCB2 nucleobindin 2 2 2
MIRT456851 ZNF460 zinc finger protein 460 2 2
MIRT463263 ZIC5 Zic family member 5 2 4
MIRT463348 ZFHX3 zinc finger homeobox 3 2 2
MIRT464778 UBE2G1 ubiquitin conjugating enzyme E2 G1 2 2
MIRT467594 SLC7A5 solute carrier family 7 member 5 2 6
MIRT468223 SGK1 serum/glucocorticoid regulated kinase 1 2 2
MIRT468469 SET SET nuclear proto-oncogene 2 4
MIRT469368 REST RE1 silencing transcription factor 2 6
MIRT470526 PPP1CC protein phosphatase 1 catalytic subunit gamma 2 4
MIRT472908 MT1E metallothionein 1E 2 2
MIRT473336 METTL21A methyltransferase like 21A 2 2
MIRT476666 FXR1 FMR1 autosomal homolog 1 2 2
MIRT477145 FAM102B family with sequence similarity 102 member B 2 2
MIRT478928 CPNE3 copine 3 2 2
MIRT479047 COIL coilin 2 8
MIRT481917 ANKRD40 ankyrin repeat domain 40 2 6
MIRT483700 BICD2 BICD cargo adaptor 2 2 8
MIRT483889 TGIF1 TGFB induced factor homeobox 1 2 2
MIRT484733 SF3A1 splicing factor 3a subunit 1 2 2
MIRT485053 THBS1 thrombospondin 1 2 2
MIRT485497 HMGN2 high mobility group nucleosomal binding domain 2 2 2
MIRT485747 CALCR calcitonin receptor 2 2
MIRT486125 MT2A metallothionein 2A 2 2
MIRT494099 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT494103 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT499091 ZDHHC21 zinc finger DHHC-type containing 21 2 4
MIRT501109 SLC5A6 solute carrier family 5 member 6 2 4
MIRT503173 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT504132 RCC1 regulator of chromosome condensation 1 2 6
MIRT504717 DLC1 DLC1 Rho GTPase activating protein 2 6
MIRT505379 TMEM154 transmembrane protein 154 2 4
MIRT505657 SHMT1 serine hydroxymethyltransferase 1 2 4
MIRT505887 RNF219 ring finger protein 219 2 2
MIRT506525 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 6
MIRT507083 GXYLT1 glucoside xylosyltransferase 1 2 6
MIRT507090 GPR180 G protein-coupled receptor 180 2 6
MIRT507174 GAN gigaxonin 2 10
MIRT507940 BTG3 BTG anti-proliferation factor 3 2 6
MIRT508316 RPL18 ribosomal protein L18 2 4
MIRT509452 CAPRIN1 cell cycle associated protein 1 2 4
MIRT509488 LARP1 La ribonucleoprotein domain family member 1 2 10
MIRT509609 GALK2 galactokinase 2 2 8
MIRT510229 PLEKHG3 pleckstrin homology and RhoGEF domain containing G3 2 8
MIRT510607 TPPP tubulin polymerization promoting protein 2 6
MIRT510842 RARB retinoic acid receptor beta 2 6
MIRT510983 PFN2 profilin 2 2 6
MIRT511370 IKZF4 IKAROS family zinc finger 4 2 6
MIRT512481 PPP2CA protein phosphatase 2 catalytic subunit alpha 2 4
MIRT513061 LYPD6 LY6/PLAUR domain containing 6 2 6
MIRT513873 HOXA5 homeobox A5 2 2
MIRT515645 MYBPC1 myosin binding protein C, slow type 2 2
MIRT516649 TRPM6 transient receptor potential cation channel subfamily M member 6 2 2
MIRT516926 OSTF1 osteoclast stimulating factor 1 2 6
MIRT517348 DCAF4L1 DDB1 and CUL4 associated factor 4 like 1 2 6
MIRT519196 NAA38 LSM8 homolog, U6 small nuclear RNA associated 2 6
MIRT520215 WASL Wiskott-Aldrich syndrome like 2 8
MIRT520541 TRA2B transformer 2 beta homolog 2 4
MIRT521613 PSAT1 phosphoserine aminotransferase 1 2 2
MIRT522258 NLK nemo like kinase 2 2
MIRT522809 KPNA3 karyopherin subunit alpha 3 2 6
MIRT522945 IRF2BP2 interferon regulatory factor 2 binding protein 2 2 4
MIRT523347 GUCD1 guanylyl cyclase domain containing 1 2 4
MIRT523375 GSR glutathione-disulfide reductase 2 4
MIRT525158 ZNF329 zinc finger protein 329 2 2
MIRT526066 CCDC81 coiled-coil domain containing 81 2 2
MIRT526164 ELP3 elongator acetyltransferase complex subunit 3 2 2
MIRT526182 HEPH hephaestin 2 2
MIRT526646 TRIM16L tripartite motif containing 16 like 2 2
MIRT527156 SCN9A sodium voltage-gated channel alpha subunit 9 2 4
MIRT527442 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT527685 ZNF552 zinc finger protein 552 2 4
MIRT527751 NANOGNB NANOG neighbor homeobox 2 2
MIRT527788 TMEM44 transmembrane protein 44 2 8
MIRT528462 NXT2 nuclear transport factor 2 like export factor 2 2 4
MIRT528869 RSPH3 radial spoke head 3 homolog 2 2
MIRT529046 ARL9 ADP ribosylation factor like GTPase 9 2 2
MIRT529107 TLL2 tolloid like 2 2 2
MIRT529377 SKP1 S-phase kinase associated protein 1 2 4
MIRT529403 ICK intestinal cell kinase 2 2
MIRT529591 TMEM220 transmembrane protein 220 2 2
MIRT530213 NSUN7 NOP2/Sun RNA methyltransferase family member 7 2 2
MIRT530800 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT530839 MAPK7 mitogen-activated protein kinase 7 2 2
MIRT530859 TTLL5 tubulin tyrosine ligase like 5 2 2
MIRT531433 PAK1 p21 (RAC1) activated kinase 1 2 2
MIRT532311 HAUS3 HAUS augmin like complex subunit 3 2 4
MIRT532501 HOXA13 homeobox A13 2 2
MIRT532601 SIX4 SIX homeobox 4 2 2
MIRT533356 UBE2W ubiquitin conjugating enzyme E2 W 2 4
MIRT534389 SEPT2 septin 2 2 2
MIRT534798 RAB8B RAB8B, member RAS oncogene family 2 2
MIRT536193 MAML3 mastermind like transcriptional coactivator 3 2 2
MIRT536243 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT536534 KCTD10 potassium channel tetramerization domain containing 10 2 2
MIRT536932 HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 2 2
MIRT538628 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT538836 C16orf70 chromosome 16 open reading frame 70 2 2
MIRT538944 BMP2K BMP2 inducible kinase 2 2
MIRT539038 ATXN7L1 ataxin 7 like 1 2 2
MIRT539379 ADSS adenylosuccinate synthase 2 6
MIRT539746 SH3RF2 SH3 domain containing ring finger 2 2 2
MIRT539879 RPL32 ribosomal protein L32 2 2
MIRT539956 CCT4 chaperonin containing TCP1 subunit 4 2 2
MIRT540458 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT541611 ASB11 ankyrin repeat and SOCS box containing 11 2 2
MIRT543034 C15orf48 chromosome 15 open reading frame 48 2 2
MIRT544838 PLA2G16 phospholipase A2 group XVI 2 2
MIRT546177 TRIAP1 TP53 regulated inhibitor of apoptosis 1 2 2
MIRT546320 TM9SF3 transmembrane 9 superfamily member 3 2 4
MIRT546897 PTPRK protein tyrosine phosphatase, receptor type K 2 2
MIRT546950 SFTPA1 surfactant protein A1 2 2
MIRT547166 PDZD8 PDZ domain containing 8 2 2
MIRT547323 NPTN neuroplastin 2 2
MIRT547359 NAA30 N(alpha)-acetyltransferase 30, NatC catalytic subunit 2 2
MIRT547562 LRIG3 leucine rich repeats and immunoglobulin like domains 3 2 4
MIRT548082 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT548218 FKBP1A FK506 binding protein 1A 2 2
MIRT548768 CNN3 calponin 3 2 2
MIRT548925 CDK6 cyclin dependent kinase 6 2 2
MIRT548954 CDC27 cell division cycle 27 2 2
MIRT549696 TLE3 transducin like enhancer of split 3 2 4
MIRT549734 NUP37 nucleoporin 37 2 2
MIRT549863 MCM4 minichromosome maintenance complex component 4 2 2
MIRT551070 MKLN1 muskelin 1 2 2
MIRT551194 EPB41L3 erythrocyte membrane protein band 4.1 like 3 2 2
MIRT552113 EMC7 ER membrane protein complex subunit 7 2 2
MIRT552236 SART3 squamous cell carcinoma antigen recognized by T-cells 3 2 2
MIRT552287 CBY1 chibby family member 1, beta catenin antagonist 2 4
MIRT552468 ZNF280B zinc finger protein 280B 2 2
MIRT553628 TJP1 tight junction protein 1 2 2
MIRT555507 PNISR PNN interacting serine and arginine rich protein 2 2
MIRT556953 IGF1R insulin like growth factor 1 receptor 2 4
MIRT557203 HNRNPU heterogeneous nuclear ribonucleoprotein U 2 4
MIRT557538 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT557603 GNPTAB N-acetylglucosamine-1-phosphate transferase alpha and beta subunits 2 2
MIRT558233 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 2
MIRT558261 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT558336 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558875 CCT6A chaperonin containing TCP1 subunit 6A 2 2
MIRT559684 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT559986 RPL24 ribosomal protein L24 2 2
MIRT561051 SKP2 S-phase kinase associated protein 2 2 2
MIRT561783 PAXBP1 PAX3 and PAX7 binding protein 1 2 2
MIRT561833 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT562588 CBX2 chromobox 2 2 2
MIRT562956 TNIP2 TNFAIP3 interacting protein 2 2 2
MIRT563047 NBPF12 NBPF member 12 2 2
MIRT563157 NOLC1 nucleolar and coiled-body phosphoprotein 1 2 2
MIRT563213 ZNF813 zinc finger protein 813 2 2
MIRT563436 SLC3A2 solute carrier family 3 member 2 2 2
MIRT563927 STAT2 signal transducer and activator of transcription 2 2 2
MIRT564149 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT564204 ABT1 activator of basal transcription 1 2 2
MIRT564214 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT564637 ZNF562 zinc finger protein 562 2 4
MIRT564932 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 2
MIRT565587 SLC6A8 solute carrier family 6 member 8 2 2
MIRT565667 SIX1 SIX homeobox 1 2 2
MIRT566233 PTMA prothymosin, alpha 2 2
MIRT566237 PTCH1 patched 1 2 2
MIRT566454 PHAX phosphorylated adaptor for RNA export 2 4
MIRT566949 LEPROT leptin receptor overlapping transcript 2 2
MIRT567323 HMGB2 high mobility group box 2 2 2
MIRT568381 ATP13A3 ATPase 13A3 2 2
MIRT568427 ATF7IP activating transcription factor 7 interacting protein 2 4
MIRT571579 USP15 ubiquitin specific peptidase 15 2 2
MIRT572335 CACNA1A calcium voltage-gated channel subunit alpha1 A 2 2
MIRT573391 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT573574 RANBP1 RAN binding protein 1 2 2
MIRT574388 UBE2N ubiquitin conjugating enzyme E2 N 2 2
MIRT576611 Ccdc117 coiled-coil domain containing 117 2 2
MIRT608962 GIMAP1 GTPase, IMAP family member 1 2 4
MIRT609962 ATF7IP2 activating transcription factor 7 interacting protein 2 2 2
MIRT611714 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT613603 SCN1A sodium voltage-gated channel alpha subunit 1 2 2
MIRT614014 PAOX polyamine oxidase 2 2
MIRT614159 GNA14 G protein subunit alpha 14 2 2
MIRT614181 FAM53B family with sequence similarity 53 member B 2 2
MIRT614544 EIF4G3 eukaryotic translation initiation factor 4 gamma 3 2 2
MIRT615284 FGF5 fibroblast growth factor 5 2 2
MIRT615831 PCSK7 proprotein convertase subtilisin/kexin type 7 2 2
MIRT618541 SEMA5A semaphorin 5A 2 2
MIRT619136 MCOLN3 mucolipin 3 2 2
MIRT619455 NUP214 nucleoporin 214 2 2
MIRT620038 ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 2 2
MIRT620243 CCDC65 coiled-coil domain containing 65 2 2
MIRT620369 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT620474 CERS6 ceramide synthase 6 2 2
MIRT620881 KCTD7 potassium channel tetramerization domain containing 7 2 2
MIRT621948 STYX serine/threonine/tyrosine interacting protein 2 2
MIRT622156 SNTG1 syntrophin gamma 1 2 2
MIRT622312 SETD5 SET domain containing 5 2 2
MIRT622486 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT623190 NAA15 N(alpha)-acetyltransferase 15, NatA auxiliary subunit 2 2
MIRT623650 HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 2 2
MIRT623655 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT624403 CCDC80 coiled-coil domain containing 80 2 4
MIRT624489 CACNG2 calcium voltage-gated channel auxiliary subunit gamma 2 2 2
MIRT624694 AR androgen receptor 2 2
MIRT625011 PAK4 p21 (RAC1) activated kinase 4 2 2
MIRT625792 PIP4K2A phosphatidylinositol-5-phosphate 4-kinase type 2 alpha 2 2
MIRT625987 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT626122 MRRF mitochondrial ribosome recycling factor 2 2
MIRT626394 ZMYM6 zinc finger MYM-type containing 6 2 2
MIRT626560 NAGS N-acetylglutamate synthase 2 2
MIRT626568 DRAM2 DNA damage regulated autophagy modulator 2 2 2
MIRT626647 ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 2 2
MIRT626956 PRDM2 PR/SET domain 2 2 2
MIRT627868 PARVB parvin beta 2 2
MIRT628071 KCNJ13 potassium voltage-gated channel subfamily J member 13 2 2
MIRT628198 GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 2 2
MIRT630547 GJB7 gap junction protein beta 7 2 2
MIRT633570 LAMP2 lysosomal associated membrane protein 2 2 2
MIRT635535 ELMOD2 ELMO domain containing 2 2 2
MIRT636219 SNAI2 snail family transcriptional repressor 2 2 2
MIRT636614 CLIC5 chloride intracellular channel 5 2 2
MIRT640754 ZBTB26 zinc finger and BTB domain containing 26 2 2
MIRT640996 PROK2 prokineticin 2 2 2
MIRT641143 ZBTB33 zinc finger and BTB domain containing 33 2 2
MIRT642288 ZNF99 zinc finger protein 99 2 2
MIRT643506 ZNF28 zinc finger protein 28 2 2
MIRT644027 ZNF792 zinc finger protein 792 2 2
MIRT644073 PARG poly(ADP-ribose) glycohydrolase 2 2
MIRT644598 SPOP speckle type BTB/POZ protein 2 2
MIRT644631 SRSF2 serine and arginine rich splicing factor 2 2 2
MIRT644955 IFNB1 interferon beta 1 2 2
MIRT646357 CPT1B carnitine palmitoyltransferase 1B 2 2
MIRT647624 IGSF9B immunoglobulin superfamily member 9B 2 2
MIRT649089 FBXO25 F-box protein 25 2 4
MIRT649382 NEDD1 neural precursor cell expressed, developmentally down-regulated 1 2 2
MIRT651176 ZNF319 zinc finger protein 319 2 2
MIRT652305 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT652393 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT652815 TBL2 transducin beta like 2 2 2
MIRT653111 SRSF1 serine and arginine rich splicing factor 1 2 2
MIRT653145 SRPK2 SRSF protein kinase 2 2 2
MIRT653815 SIN3A SIN3 transcription regulator family member A 2 2
MIRT653947 SEPSECS Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase 2 2
MIRT655157 PHF21A PHD finger protein 21A 2 2
MIRT655317 PDCD11 programmed cell death 11 2 2
MIRT656937 KIAA1456 KIAA1456 2 2
MIRT657000 KCNN3 potassium calcium-activated channel subfamily N member 3 2 2
MIRT657557 GSK3B glycogen synthase kinase 3 beta 2 2
MIRT657692 GPR135 G protein-coupled receptor 135 2 2
MIRT658251 FAXC failed axon connections homolog 2 2
MIRT658717 ELOVL4 ELOVL fatty acid elongase 4 2 2
MIRT659421 COL4A4 collagen type IV alpha 4 chain 2 2
MIRT659488 CLDN1 claudin 1 2 2
MIRT659534 CHD9 chromodomain helicase DNA binding protein 9 2 2
MIRT659574 CEP85L centrosomal protein 85 like 2 2
MIRT660570 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT661595 BMPR1B bone morphogenetic protein receptor type 1B 2 2
MIRT661844 ZNF587B zinc finger protein 587B 2 2
MIRT663397 COA4 cytochrome c oxidase assembly factor 4 homolog 2 2
MIRT664409 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT664804 GALC galactosylceramidase 2 2
MIRT664834 GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 2 2
MIRT666146 SP4 Sp4 transcription factor 2 2
MIRT666779 PTGES3L prostaglandin E synthase 3 like 2 2
MIRT667105 SLC25A2 solute carrier family 25 member 2 2 2
MIRT667115 OLA1 Obg like ATPase 1 2 2
MIRT667504 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT668011 HCFC2 host cell factor C2 2 2
MIRT672876 TTC28 tetratricopeptide repeat domain 28 2 2
MIRT682598 CPA4 carboxypeptidase A4 2 2
MIRT683340 ZNF581 zinc finger protein 581 2 2
MIRT683581 CARD8 caspase recruitment domain family member 8 2 2
MIRT683691 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT683712 EXOSC6 exosome component 6 2 4
MIRT684560 ZNF708 zinc finger protein 708 2 2
MIRT685425 ACAD8 acyl-CoA dehydrogenase family member 8 2 2
MIRT685509 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT686052 SLC5A5 solute carrier family 5 member 5 2 2
MIRT686140 B4GALT7 beta-1,4-galactosyltransferase 7 2 2
MIRT686425 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT687716 KLF2 Kruppel like factor 2 2 2
MIRT687727 KIAA1467 family with sequence similarity 234 member B 2 2
MIRT688183 FRRS1 ferric chelate reductase 1 2 2
MIRT688306 FAM208A family with sequence similarity 208 member A 2 2
MIRT688420 DUSP2 dual specificity phosphatase 2 2 2
MIRT688491 DNA2 DNA replication helicase/nuclease 2 2 2
MIRT688725 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT689208 ZNF574 zinc finger protein 574 2 2
MIRT690340 DHX36 DEAH-box helicase 36 2 2
MIRT690516 ZNF845 zinc finger protein 845 2 2
MIRT690614 DCTN3 dynactin subunit 3 2 2
MIRT691051 RDH13 retinol dehydrogenase 13 2 2
MIRT691265 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT692171 RNF207 ring finger protein 207 2 2
MIRT692728 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT693384 ZNF528 zinc finger protein 528 2 2
MIRT694449 GSG2 histone H3 associated protein kinase 2 2
MIRT694485 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT695650 NUP205 nucleoporin 205 2 2
MIRT695803 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT696128 GLP2R glucagon like peptide 2 receptor 2 2
MIRT696694 APOC3 apolipoprotein C3 2 2
MIRT696888 SAMD15 sterile alpha motif domain containing 15 2 2
MIRT697790 UBXN7 UBX domain protein 7 2 2
MIRT698144 TNPO3 transportin 3 2 2
MIRT698363 TMEM127 transmembrane protein 127 2 2
MIRT698489 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT699121 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT699849 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT701321 NT5DC3 5'-nucleotidase domain containing 3 2 2
MIRT701386 NOA1 nitric oxide associated 1 2 2
MIRT701391 NLRC3 NLR family CARD domain containing 3 2 2
MIRT701954 MITF melanogenesis associated transcription factor 2 2
MIRT702167 MAP1LC3B microtubule associated protein 1 light chain 3 beta 2 2
MIRT702782 IFNLR1 interferon lambda receptor 1 2 2
MIRT703466 FOXJ3 forkhead box J3 2 2
MIRT703968 EMP2 epithelial membrane protein 2 2 2
MIRT703973 EMC10 ER membrane protein complex subunit 10 2 2
MIRT704350 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT704603 CLN8 CLN8, transmembrane ER and ERGIC protein 2 2
MIRT705272 BAHD1 bromo adjacent homology domain containing 1 2 2
MIRT707156 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT707271 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT707461 PPFIBP1 PPFIA binding protein 1 2 2
MIRT707505 AXL AXL receptor tyrosine kinase 2 2
MIRT707705 FAM118A family with sequence similarity 118 member A 2 2
MIRT707722 CDC6 cell division cycle 6 2 2
MIRT708018 TSPAN1 tetraspanin 1 2 2
MIRT708071 LIX1L limb and CNS expressed 1 like 2 2
MIRT708139 GK5 glycerol kinase 5 (putative) 2 2
MIRT710550 NR4A2 nuclear receptor subfamily 4 group A member 2 2 2
MIRT713228 GPR75 G protein-coupled receptor 75 2 2
MIRT713273 SPRTN SprT-like N-terminal domain 2 2
MIRT715622 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT716477 SESTD1 SEC14 and spectrin domain containing 1 2 2
MIRT716492 ZNF394 zinc finger protein 394 2 2
MIRT717715 NCKAP1 NCK associated protein 1 2 2
MIRT718046 ANAPC1 anaphase promoting complex subunit 1 2 2
MIRT719400 SLC15A4 solute carrier family 15 member 4 2 2
MIRT719899 PTGIS prostaglandin I2 synthase 2 2
MIRT720781 MSANTD3-TMEFF1 MSANTD3-TMEFF1 readthrough 2 2
MIRT722063 TMEFF1 transmembrane protein with EGF like and two follistatin like domains 1 2 2
MIRT723234 FAM91A1 family with sequence similarity 91 member A1 2 2
MIRT723768 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT724057 FAM84A family with sequence similarity 84 member A 2 2
MIRT725194 SDAD1 SDA1 domain containing 1 2 2
MIRT735687 IL6ST interleukin 6 signal transducer 2 0
MIRT735689 ACVR1C activin A receptor type 1C 2 0
MIRT736080 SPOCK1 SPARC/osteonectin, cwcv and kazal like domains proteoglycan 1 1 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-548c-3p Vorinostat (SAHA) approved 5311 Microarray A549 human non-small cell lung cancer cells 19513533 2009 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-548c Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-548c-3p Sorafenib 216239 NSC747971 approved resistant High Hepatocellular Carcinoma cell line (HepG2, Hep-394, Hep-SWX, Huh-7)
hsa-miR-548c-3p Mitoxantrone 4212 NSC279836 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-548c-3p Cisplatin 5460033 NSC119875 approved sensitive High Gastric Cancer tissue
hsa-miR-548c-3p Fluorouracil 3385 NSC19893 approved sensitive High Gastric Cancer tissue
hsa-miR-548c-3p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-548c-3p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-548c-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-548c-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-548c-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-548c-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

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