miRTarBase - #MIRT091944


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pre-miRNA Information
pre-miRNA hsa-mir-527   
Genomic Coordinates chr19: 53754018 - 53754102
Synonyms MIRN527, hsa-mir-527, MIR527
Description Homo sapiens miR-527 stem-loop
Comment miR-527 cloned in has a 1 nt 3' extension (A), which is incompatible with the genome sequence.
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-527
Sequence 14| CUGCAAAGGGAAGCCCUUUC |33
Evidence Experimental
Experiments Array-cloned
Expression Profile
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs755585957 3 dbSNP
rs377171698 8 dbSNP
rs753483292 9 dbSNP
rs778579263 10 dbSNP
rs1469894287 13 dbSNP
rs1208710782 14 dbSNP
rs747920534 15 dbSNP
rs1444484624 16 dbSNP
rs1279831073 17 dbSNP
rs771908845 18 dbSNP
rs186554893 20 dbSNP
Putative Targets

Gene Information
Gene Symbol ZBTB47   
Synonyms ZNF651
Description zinc finger and BTB domain containing 47
Transcript NM_145166   
Expression
Putative miRNA Targets on ZBTB47
3'UTR of ZBTB47
(miRNA target sites are highlighted)		 
>ZBTB47|NM_145166|3'UTR
   1 CTGCCGAGCTGCACCCGTGCACCCGCTGGGGCCTGGAGTCAGGGCCCACTCCAGGAGGGACCCACTGCCTTCCCGGGGAG
  81 CACAGTAGTGCGGGCCTGGGCCCTGCTCCACCTCCAGAAGTGGCTGGATGTACCCTGCCTGAGGCCCCGACGAGGAGGGG
 161 TATGCAGGCTGGCAGGCCCCAGAGCTGGTGGAGGGCATCTCACTCCCAAGTGCCCCCCCTTTCTGTGACTCCTTGAAGCC
 241 TTTACTTTTTTTTTTTTTTGGAAGTGAAGGAAAAAGAAACTATTTACAGCACTCCCCTCCAGGTGAGGGGGGTGCTGGGG
 321 GTCTGCAGCAGAAAGAAAGGGGCCTGGGCAGCAGGTGTGGCCAGTCCCTCTGCCAAGGCCTGTGCCAGAGGGGTTGGCCA
 401 GTTGGAGCCTGGGTCAGCCTCAGCAGCCTATCCCCATGTCCTCTATGCCCCTAATTTGCTTCCTCATCTTGGAGGGTTTG
 481 GGGAGAAGTTGGCGTGCCACCCCCACAACCCCTGAGGAGGTGTAGACCCAGTCTGAGAGCCGCAAGCACTGAGGCAGGGC
 561 CTGAGACTGGACCTGGGTGAGCGTGGGGGGTGGAGGGTGGCGAGGTGCGGAGACTGCAGACCAGTGCTTCACTGTGTGGA
 641 GTGGGGCAGGCAGGGGCTGGACCCCAGGGACTTGCCTTCCCCACCCACTCTGCTGCCAGCAGGCCCAGGGATCCCTGACC
 721 TGCACCAGGTGGCACCAAGGGTCCTGAGTCCTGGAGATGTCCCCAGAAGCTGCTGTGCCTCACAGCGCTGTGAGCCAGAC
 801 CCTCCTTGGGCAGACAGGCTGACTGGCAGCACCAGCTTTGGGGGCAGAGTCCTAGGATGAGGCTTGGGCAGTGCTGGTAG
 881 GGTTTCAAGGTGCTATTAGTGGGGCAGGGGCAGGGCGGCTGCTCACAGAGCACCCCAGTTCCTCACCAGCTACTCTGGCC
 961 ATATATCCCACACCAGAAGGAACAAGTGTGGCTGTGTCCATCTCTGCTCCCCCAAAGGCCCGCTCTAGGCCTTATCCTCC
1041 CTCTAGGTCCTGCCACAACCTGTCCCTGGCTGGCTCCAGCGTCCTCGTCCCTCCTGGGCCTGTGCACCGGTGGGTGGGGC
1121 GCCCATAGCACTGCCGGTAAAGGAGCCTGCATGTTCAGGCCCCTCGGGGGATTGGGGGGACTGGGGAGGCGCAGCCTAGA
1201 CCCAATTGCTTGCCCCCATGAGGCTAGCACTAATAGGAAACCCTTTTTTGTTGTCATTTAATGTCTTTATTCCTGCCTTT
1281 AATATGGGGAGGAAGGTTCCATAAGCTACATGTTTCCTAGTTAAGCTCTTTCCTATTGTGTTTATACAGTTTTGTTTGTT
1361 ATACTCTTTGCACCTTAAACCCCCACCACTCCCCGACACTATTGCCTTCCCAGCATGGCTGGAGTGGGAAGAGGCTTGGG
1441 CCCCGGGGGAATGGTTAGGGGGACTGAACCCCTCTGACCTTATGAGGCCCATGGCACTGGGGCAGGGAGCTGGGGACATT
1521 TTAATCATCAATAAACGAAGCACTTTATTCTGTACAGATTTGGGCAGGCCCAAGGTGCCCGAGTGATCTGAGGATTTATA
1601 ATCCAAGCCACACCACCCTGGTTGTTCTCTGGGCTTGGAGGGTACAGTGCCAGCAGCTTCCTTGCCCAATTGATGTTGGA
1681 GCTGTAGACGTACGCTCAGGCGCTCCTGCTGTCCTGGGGGAGAGAAGGTTCGCCCCTCCCCGAGGAAGAAGGCTTCTGGT
1761 CAGGACCCCCACCCCAAGGCTGGGGACTCCAGGCTCCTGCTTTACTGTAGCTCTTTTTCTTCCTTGCACTCCTTGATCTT
1841 TGGGCTTCCGTGATGTCCTCAGGGTCCCCCCCTCCCTGTTGCTATTTTTAATCTCTAGTCCCAGTGCCTGGCAGCTCTTT
1921 GGAGCTGGCTCACATTTTCCCAAAAAAAGTTGATCTCTCCCAGTGGGCTGTAGGCAGGGTCCTCCATGGGTTTCCAACCC
2001 CCATCACTGGCACCAGGATCTCCCACAGGCACTGGTGGTGTCATCACCTGCTGGCCCCACTACAGCCTGAGTAGGCCTGA
2081 GTGGCCGTGGCCAGGCTGAGACCTGTCAGGCCATACTGACAAGCAGAGGTCAGAGACACTGGTGGGGAGCTGGCAATGAA
2161 ACCCTGTCCTGGGACATGGGTTTCATGTTCTTGTACACTTCCCCTCTGGGATCAGGTGAGGGGTCCAGACAGCTGACCAG
2241 ACAGCTTGACAGCTGGTCAAGACGGTCACGGGAGCTCTAGGTGGGCACAACCAACCCCTCTCCTGGGAGGCCCCTGCCCC
2321 ACTGGGGATAGGAGCCTGTGTCCCTGGTGCTAAGCACTCTCTTCACTTGGGCCATTGTTGGTGGGGGCTCCTTTCCGGCC
2401 AGACCACAAGGCCAGAAGCAATAATGGCACCTCAGCAGTTCCAGTATGGATAGGGGTTCCTGTTTTACTAGCTTTTACAT
2481 CTTTTTATTTAAAACAAAACAACACAAAAAAACAATGTGCCCCCAGATGTCAGAATGAGGCGACTAGGGCACCATACTCA
2561 CTTTCCAGGGCTGGGGGAAGGGGGACGCAGGATCATCCCCTCCCAAGGAGATCTGTGGGGGTCCCACCGTCCATCTGGAC
2641 TTCTCAGCCTGTTTGGCTAGAACTCAGGCCTGGAGTCTGGGTCTGCCCCCTCCCCGGCTCCTTGGGGCTCTCTGGTCTCA
2721 GGCCAGCTGGCGATGGGTGGCTAGAGTGATGAACTCAAGCCCTGTGGCCACAGTTCTGGGAGCCTTCAACCCTGGCTCAT
2801 GCTGCCATAGTCTCCACGGTGCCCTTCACAGAGGGCTTGGTAGTGGCAGAATGGCCATGCCCAGGTGTGTGTTGAGACCA
2881 TTGACAACTGCTCGTGTACAGGCACCCCACAGCCCCAGAGCATGGGGCACAGCAGGCATGCGAGTGAGAGGATGAAGGGG
2961 AATAAAGTCAGTACAACTCGTGAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cuuucccgAAGGGAAACGUc 5'
                  | |:||||||| 
Target 5' gtttgttaTACTCTTTGCAc 3'
 1354 - 1373 148.00 -10.20
2 
miRNA  3' cuuucCCGAAGGGAAACGUc 5'
               |||  |:||||| | 
Target 5' tgcctGGCAGCTCTTTGGAg 3'
 1905 - 1924 123.00 -15.90
3 
miRNA  3' cuuUCCCG----A--AGGGAAACGUc 5'
             |||||    |  || |||| || 
Target 5' actAGGGCACCATACTCACTTTCCAg 3'
 2543 - 2568 121.00 -11.51
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN2477051 44 COSMIC
COSN31959864 55 COSMIC
COSN20098341 260 COSMIC
COSN29189099 520 COSMIC
COSN18891174 530 COSMIC
COSN1277129 669 COSMIC
COSN30172441 711 COSMIC
COSN30541639 773 COSMIC
COSN20090805 855 COSMIC
COSN24494449 901 COSMIC
COSN28321346 1001 COSMIC
COSN1950030 1035 COSMIC
COSN28651748 1192 COSMIC
COSN15866042 1241 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1324911804 10 dbSNP
rs1232535206 12 dbSNP
rs891407035 14 dbSNP
rs1254346196 17 dbSNP
rs769603715 18 dbSNP
rs1205934219 19 dbSNP
rs1378349806 19 dbSNP
rs1262790320 21 dbSNP
rs1405459655 24 dbSNP
rs964397476 29 dbSNP
rs976429197 32 dbSNP
rs923188749 33 dbSNP
rs1007058066 34 dbSNP
rs1191264158 36 dbSNP
rs1040300915 37 dbSNP
rs955907213 40 dbSNP
rs1240008337 43 dbSNP
rs988571999 46 dbSNP
rs996009464 55 dbSNP
rs1025626754 58 dbSNP
rs1348157444 62 dbSNP
rs1293219535 63 dbSNP
rs951362988 73 dbSNP
rs1355040420 74 dbSNP
rs914664287 75 dbSNP
rs1382078272 76 dbSNP
rs1334956531 79 dbSNP
rs1397974034 92 dbSNP
rs1383158565 93 dbSNP
rs947437354 95 dbSNP
rs1024888813 96 dbSNP
rs1044417795 113 dbSNP
rs927308124 117 dbSNP
rs1161550304 125 dbSNP
rs1443954689 134 dbSNP
rs1385286833 135 dbSNP
rs1189068976 137 dbSNP
rs1444922428 142 dbSNP
rs1228839741 146 dbSNP
rs1260682071 149 dbSNP
rs938692013 152 dbSNP
rs1244358676 153 dbSNP
rs1359421012 162 dbSNP
rs1284847972 164 dbSNP
rs1057414571 169 dbSNP
rs1324775862 176 dbSNP
rs1356819547 177 dbSNP
rs1317816552 178 dbSNP
rs1400872140 188 dbSNP
rs541667335 194 dbSNP
rs994340097 195 dbSNP
rs1423888984 196 dbSNP
rs1048568572 198 dbSNP
rs925135386 200 dbSNP
rs368555727 206 dbSNP
rs1372005640 213 dbSNP
rs1474110158 213 dbSNP
rs561855202 213 dbSNP
rs887546541 215 dbSNP
rs1478612378 216 dbSNP
rs1265768897 217 dbSNP
rs1006411806 218 dbSNP
rs1017337215 219 dbSNP
rs964771512 220 dbSNP
rs1337481197 221 dbSNP
rs1269691435 233 dbSNP
rs1193466294 240 dbSNP
rs1219452862 242 dbSNP
rs1342651736 245 dbSNP
rs905090362 245 dbSNP
rs11458566 246 dbSNP
rs1408073575 246 dbSNP
rs1428476967 246 dbSNP
rs1428348186 248 dbSNP
rs397816305 260 dbSNP
rs1189604760 261 dbSNP
rs1392257411 262 dbSNP
rs1422916530 263 dbSNP
rs1163035434 265 dbSNP
rs1350505302 266 dbSNP
rs1003225878 277 dbSNP
rs1198254108 291 dbSNP
rs1459484332 294 dbSNP
rs1247687650 297 dbSNP
rs1201579314 302 dbSNP
rs1436624524 307 dbSNP
rs1272333645 308 dbSNP
rs1287095730 309 dbSNP
rs997131671 310 dbSNP
rs1320258114 311 dbSNP
rs1261435205 312 dbSNP
rs533122524 313 dbSNP
rs932982102 314 dbSNP
rs1335141996 318 dbSNP
rs1051417928 321 dbSNP
rs912796471 330 dbSNP
rs1435633101 340 dbSNP
rs547093278 341 dbSNP
rs1299466744 344 dbSNP
rs1175213557 346 dbSNP
rs1414702059 348 dbSNP
rs1380150994 356 dbSNP
rs868184984 359 dbSNP
rs1426279344 367 dbSNP
rs79618755 371 dbSNP
rs748977373 374 dbSNP
rs1290108529 385 dbSNP
rs914380024 387 dbSNP
rs1238166051 390 dbSNP
rs1179831189 392 dbSNP
rs968560831 393 dbSNP
rs1213015474 399 dbSNP
rs768138492 403 dbSNP
rs927390448 407 dbSNP
rs1209622716 412 dbSNP
rs566903943 429 dbSNP
rs1057115728 431 dbSNP
rs1221930113 433 dbSNP
rs1349703993 437 dbSNP
rs918860397 438 dbSNP
rs1013588425 444 dbSNP
rs1443046125 449 dbSNP
rs1335552829 452 dbSNP
rs1183268122 466 dbSNP
rs1414776895 468 dbSNP
rs1425695639 476 dbSNP
rs1360603857 477 dbSNP
rs1336540367 489 dbSNP
rs1399264286 493 dbSNP
rs867102460 494 dbSNP
rs532564254 495 dbSNP
rs905094382 501 dbSNP
rs1002541411 506 dbSNP
rs1181398893 508 dbSNP
rs1483700039 514 dbSNP
rs1239370580 523 dbSNP
rs1032139977 524 dbSNP
rs1457651011 528 dbSNP
rs1322333784 529 dbSNP
rs1403682767 534 dbSNP
rs1487816199 535 dbSNP
rs1048663685 536 dbSNP
rs987970652 542 dbSNP
rs888636479 543 dbSNP
rs942881890 544 dbSNP
rs1228450612 545 dbSNP
rs1380730828 551 dbSNP
rs373596339 557 dbSNP
rs1221577181 558 dbSNP
rs900216692 564 dbSNP
rs1360238059 568 dbSNP
rs1299245937 571 dbSNP
rs1422027897 574 dbSNP
rs1305596956 578 dbSNP
rs569450337 583 dbSNP
rs1229511510 584 dbSNP
rs1270546749 585 dbSNP
rs1424400930 585 dbSNP
rs1416089254 586 dbSNP
rs1184951802 587 dbSNP
rs910224156 588 dbSNP
rs1263586053 589 dbSNP
rs1029931207 591 dbSNP
rs866487176 592 dbSNP
rs538523636 594 dbSNP
rs1264728953 595 dbSNP
rs1222226612 596 dbSNP
rs1322961401 598 dbSNP
rs976072740 600 dbSNP
rs376668432 602 dbSNP
rs1010139349 603 dbSNP
rs68190114 606 dbSNP
rs1293414552 609 dbSNP
rs968988132 610 dbSNP
rs887171177 632 dbSNP
rs1484322088 636 dbSNP
rs1168471585 640 dbSNP
rs979924338 642 dbSNP
rs1046361451 644 dbSNP
rs1196129172 647 dbSNP
rs1472940294 653 dbSNP
rs1479297047 654 dbSNP
rs1266449717 655 dbSNP
rs570099501 657 dbSNP
rs905196830 658 dbSNP
rs1034848562 660 dbSNP
rs960086983 661 dbSNP
rs1032667754 663 dbSNP
rs1259527418 663 dbSNP
rs893764960 666 dbSNP
rs1310758808 668 dbSNP
rs533676266 670 dbSNP
rs1469158064 682 dbSNP
rs1334484023 685 dbSNP
rs1387826118 687 dbSNP
rs1370440615 694 dbSNP
rs1296505749 695 dbSNP
rs1360550008 697 dbSNP
rs918619646 705 dbSNP
rs929944049 706 dbSNP
rs1439504055 707 dbSNP
rs1173047567 724 dbSNP
rs1297137988 728 dbSNP
rs1376836859 741 dbSNP
rs1176581086 742 dbSNP
rs767110507 744 dbSNP
rs954433456 745 dbSNP
rs1457788068 751 dbSNP
rs777296069 771 dbSNP
rs1201359661 776 dbSNP
rs1017231031 780 dbSNP
rs910129639 787 dbSNP
rs537180758 788 dbSNP
rs576503809 801 dbSNP
rs900269534 821 dbSNP
rs555708472 822 dbSNP
rs1279714691 837 dbSNP
rs536102737 840 dbSNP
rs1051450205 845 dbSNP
rs1202742535 852 dbSNP
rs1303199068 857 dbSNP
rs1251329948 861 dbSNP
rs891499505 871 dbSNP
rs1009847586 874 dbSNP
rs1021967294 875 dbSNP
rs904399493 878 dbSNP
rs556085270 885 dbSNP
rs1422861755 892 dbSNP
rs1001792023 895 dbSNP
rs1256350640 900 dbSNP
rs1353841132 901 dbSNP
rs576297814 908 dbSNP
rs567366002 911 dbSNP
rs992935523 916 dbSNP
rs1216495172 917 dbSNP
rs1025731649 918 dbSNP
rs951393954 919 dbSNP
rs1053816715 935 dbSNP
rs1339962574 938 dbSNP
rs561891829 945 dbSNP
rs984106272 957 dbSNP
rs1398041023 958 dbSNP
rs1358364022 962 dbSNP
rs1297396425 969 dbSNP
rs527464906 978 dbSNP
rs910129055 981 dbSNP
rs942944265 985 dbSNP
rs142140191 987 dbSNP
rs976000857 995 dbSNP
rs890290762 1002 dbSNP
rs758776074 1008 dbSNP
rs1169374036 1012 dbSNP
rs922804686 1013 dbSNP
rs934144623 1014 dbSNP
rs1051492057 1020 dbSNP
rs1261444495 1022 dbSNP
rs181142432 1023 dbSNP
rs945716572 1025 dbSNP
rs1344190049 1026 dbSNP
rs1288713649 1031 dbSNP
rs1208587483 1040 dbSNP
rs994891336 1041 dbSNP
rs1436328287 1042 dbSNP
rs1027351510 1048 dbSNP
rs751774958 1056 dbSNP
rs1338799974 1065 dbSNP
rs1277313875 1068 dbSNP
rs952908877 1071 dbSNP
rs983047688 1077 dbSNP
rs1042703802 1081 dbSNP
rs532588385 1082 dbSNP
rs866290884 1086 dbSNP
rs1274273429 1087 dbSNP
rs1001488410 1088 dbSNP
rs1207396489 1090 dbSNP
rs970880200 1091 dbSNP
rs1056098323 1100 dbSNP
rs757377262 1109 dbSNP
rs552332620 1110 dbSNP
rs1170969367 1113 dbSNP
rs1478317094 1114 dbSNP
rs373501292 1116 dbSNP
rs1025743018 1117 dbSNP
rs951404860 1119 dbSNP
rs1451574982 1121 dbSNP
rs1248365342 1122 dbSNP
rs938139614 1126 dbSNP
rs1474339237 1129 dbSNP
rs1054168520 1130 dbSNP
rs1219512258 1136 dbSNP
rs1005986348 1137 dbSNP
rs1016908593 1142 dbSNP
rs964380430 1143 dbSNP
rs189869973 1150 dbSNP
rs945256654 1151 dbSNP
rs1389339900 1153 dbSNP
rs975716839 1159 dbSNP
rs922847201 1166 dbSNP
rs955543606 1167 dbSNP
rs1170902448 1170 dbSNP
rs878897099 1171 dbSNP
rs781203106 1173 dbSNP
rs1324846199 1174 dbSNP
rs988227589 1176 dbSNP
rs890405813 1180 dbSNP
rs912999784 1184 dbSNP
rs1009142657 1188 dbSNP
rs1038889939 1191 dbSNP
rs11129967 1192 dbSNP
rs1237668224 1206 dbSNP
rs1043183698 1207 dbSNP
rs1276240760 1209 dbSNP
rs994608671 1211 dbSNP
rs925665507 1214 dbSNP
rs1355796080 1218 dbSNP
rs1210499406 1219 dbSNP
rs1027297670 1224 dbSNP
rs369125479 1225 dbSNP
rs1055749481 1230 dbSNP
rs950364160 1242 dbSNP
rs534147134 1243 dbSNP
rs1292028520 1248 dbSNP
rs1004587121 1249 dbSNP
rs547539322 1253 dbSNP
rs895701971 1254 dbSNP
rs570222726 1266 dbSNP
rs771189236 1266 dbSNP
rs577918662 1273 dbSNP
rs1438869206 1274 dbSNP
rs1046908245 1291 dbSNP
rs1248360476 1295 dbSNP
rs1379737276 1296 dbSNP
rs1187323559 1317 dbSNP
rs887205745 1318 dbSNP
rs1005665372 1328 dbSNP
rs1471273393 1329 dbSNP
rs865913866 1333 dbSNP
rs1450980799 1337 dbSNP
rs545168783 1341 dbSNP
rs964118907 1342 dbSNP
rs539510083 1362 dbSNP
rs146404908 1363 dbSNP
rs1472878669 1366 dbSNP
rs1352980694 1367 dbSNP
rs1164419641 1378 dbSNP
rs1022496116 1380 dbSNP
rs1309333049 1380 dbSNP
rs955596697 1388 dbSNP
rs1376345004 1389 dbSNP
rs181088723 1390 dbSNP
rs914099601 1391 dbSNP
rs749101794 1395 dbSNP
rs868036935 1396 dbSNP
rs1437700360 1397 dbSNP
rs1335041877 1400 dbSNP
rs1418405191 1434 dbSNP
rs1360513356 1436 dbSNP
rs945371153 1437 dbSNP
rs535418000 1445 dbSNP
rs759840992 1445 dbSNP
rs1411764700 1446 dbSNP
rs768464738 1450 dbSNP
rs1259319198 1453 dbSNP
rs937030538 1466 dbSNP
rs747783292 1467 dbSNP
rs1286561034 1470 dbSNP
rs1217902750 1471 dbSNP
rs796558626 1476 dbSNP
rs1285970816 1482 dbSNP
rs1348484088 1483 dbSNP
rs1227670270 1493 dbSNP
rs1268657652 1495 dbSNP
rs1295488531 1499 dbSNP
rs1398478913 1503 dbSNP
rs1466132394 1505 dbSNP
rs900349404 1510 dbSNP
rs1299305928 1512 dbSNP
rs917190270 1513 dbSNP
rs1348183314 1515 dbSNP
rs1201530249 1521 dbSNP
rs1255053569 1528 dbSNP
rs1442580126 1537 dbSNP
rs139736873 1538 dbSNP
rs1047002103 1546 dbSNP
rs753643072 1552 dbSNP
rs1473900524 1559 dbSNP
rs1361514149 1561 dbSNP
rs1471958762 1575 dbSNP
rs886972892 1581 dbSNP
rs572340514 1582 dbSNP
rs541227276 1590 dbSNP
rs1413331953 1593 dbSNP
rs1038459385 1600 dbSNP
rs1221738606 1601 dbSNP
rs771738688 1610 dbSNP
rs1255690624 1615 dbSNP
rs1217672061 1620 dbSNP
rs560547364 1636 dbSNP
rs1317630362 1640 dbSNP
rs1296809515 1641 dbSNP
rs899873245 1644 dbSNP
rs1171121759 1645 dbSNP
rs1366200549 1646 dbSNP
rs772781689 1649 dbSNP
rs1396775520 1654 dbSNP
rs996874594 1655 dbSNP
rs1029587318 1665 dbSNP
rs1396817186 1667 dbSNP
rs1329497418 1671 dbSNP
rs1348753109 1674 dbSNP
rs1465346745 1688 dbSNP
rs186177120 1690 dbSNP
rs1009797207 1691 dbSNP
rs576072471 1694 dbSNP
rs968278824 1695 dbSNP
rs200439629 1699 dbSNP
rs562779850 1702 dbSNP
rs1469387744 1703 dbSNP
rs11706280 1704 dbSNP
rs1345313062 1716 dbSNP
rs989641668 1716 dbSNP
rs1252252187 1717 dbSNP
rs1032764875 1718 dbSNP
rs548152471 1732 dbSNP
rs3821837 1733 dbSNP
rs1373258705 1734 dbSNP
rs916950084 1739 dbSNP
rs1446317302 1740 dbSNP
rs527938659 1742 dbSNP
rs374848455 1743 dbSNP
rs1482477369 1746 dbSNP
rs949684038 1758 dbSNP
rs1464299597 1765 dbSNP
rs911908582 1772 dbSNP
rs1455573623 1773 dbSNP
rs1377918334 1774 dbSNP
rs763269071 1778 dbSNP
rs547626766 1781 dbSNP
rs369291583 1782 dbSNP
rs908449249 1784 dbSNP
rs1253175856 1790 dbSNP
rs1473827448 1794 dbSNP
rs1255819102 1797 dbSNP
rs1174428697 1798 dbSNP
rs1350766185 1799 dbSNP
rs941204228 1824 dbSNP
rs921725552 1826 dbSNP
rs1038585171 1829 dbSNP
rs930493399 1836 dbSNP
rs1309373241 1848 dbSNP
rs1048950822 1850 dbSNP
rs571021869 1851 dbSNP
rs932765186 1854 dbSNP
rs1051109106 1855 dbSNP
rs1045402417 1866 dbSNP
rs1436503442 1866 dbSNP
rs369632721 1866 dbSNP
rs553964552 1866 dbSNP
rs764497869 1867 dbSNP
rs373020228 1868 dbSNP
rs539187111 1869 dbSNP
rs1300462583 1870 dbSNP
rs1021215277 1871 dbSNP
rs549830497 1872 dbSNP
rs895426491 1873 dbSNP
rs1011011290 1877 dbSNP
rs1022447924 1885 dbSNP
rs569613719 1886 dbSNP
rs978163825 1887 dbSNP
rs1019321424 1891 dbSNP
rs1321422531 1893 dbSNP
rs1034235617 1894 dbSNP
rs535453254 1898 dbSNP
rs959556055 1900 dbSNP
rs761986480 1901 dbSNP
rs1293669471 1907 dbSNP
rs1416336873 1909 dbSNP
rs1024060433 1911 dbSNP
rs190499211 1913 dbSNP
rs966077632 1915 dbSNP
rs1190023030 1926 dbSNP
rs971087687 1930 dbSNP
rs1297447661 1939 dbSNP
rs975190162 1942 dbSNP
rs982403230 1943 dbSNP
rs1161017204 1953 dbSNP
rs1457082595 1956 dbSNP
rs1434182952 1960 dbSNP
rs1166654286 1962 dbSNP
rs1201374430 1963 dbSNP
rs908472446 1964 dbSNP
rs1261512746 1966 dbSNP
rs1193549190 1972 dbSNP
rs1448124359 1983 dbSNP
rs921855773 1984 dbSNP
rs572377285 1986 dbSNP
rs1488207688 1988 dbSNP
rs951972823 1992 dbSNP
rs962916763 1998 dbSNP
rs1169340581 2014 dbSNP
rs1372530778 2023 dbSNP
rs3733059 2024 dbSNP
rs67813463 2025 dbSNP
rs3733060 2026 dbSNP
rs932483001 2027 dbSNP
rs1051156651 2031 dbSNP
rs928408983 2032 dbSNP
rs1295057373 2035 dbSNP
rs1327443637 2040 dbSNP
rs577753630 2041 dbSNP
rs868800730 2048 dbSNP
rs1421898536 2049 dbSNP
rs756176426 2056 dbSNP
rs1319455321 2064 dbSNP
rs945382534 2067 dbSNP
rs541039180 2070 dbSNP
rs1375232186 2073 dbSNP
rs3733061 2078 dbSNP
rs563021383 2080 dbSNP
rs6785543 2087 dbSNP
rs748847280 2088 dbSNP
rs1001554598 2091 dbSNP
rs1043849065 2095 dbSNP
rs1212024999 2096 dbSNP
rs1246528274 2106 dbSNP
rs1257175130 2108 dbSNP
rs1196098723 2115 dbSNP
rs1341215967 2122 dbSNP
rs528342139 2138 dbSNP
rs754749105 2143 dbSNP
rs182975464 2163 dbSNP
rs1305045532 2164 dbSNP
rs1444122531 2168 dbSNP
rs778692610 2174 dbSNP
rs1399169856 2188 dbSNP
rs1329149212 2195 dbSNP
rs1013755646 2197 dbSNP
rs1422203115 2198 dbSNP
rs1024071656 2205 dbSNP
rs999529689 2217 dbSNP
rs1369001199 2226 dbSNP
rs1454251766 2228 dbSNP
rs1019018723 2231 dbSNP
rs971109781 2237 dbSNP
rs1003892269 2247 dbSNP
rs1318335290 2259 dbSNP
rs996181423 2260 dbSNP
rs528024013 2264 dbSNP
rs547663042 2265 dbSNP
rs1348588328 2268 dbSNP
rs551536072 2270 dbSNP
rs974435183 2286 dbSNP
rs1227253867 2288 dbSNP
rs1312746121 2289 dbSNP
rs1322881261 2292 dbSNP
rs61347556 2300 dbSNP
rs953887547 2301 dbSNP
rs1443983057 2303 dbSNP
rs1337867904 2317 dbSNP
rs1332680346 2322 dbSNP
rs1434626196 2333 dbSNP
rs1376532447 2336 dbSNP
rs986557514 2337 dbSNP
rs907676910 2339 dbSNP
rs1464774085 2341 dbSNP
rs1209743978 2344 dbSNP
rs961865455 2345 dbSNP
rs1482367380 2348 dbSNP
rs1159344982 2358 dbSNP
rs1471304258 2362 dbSNP
rs981722209 2365 dbSNP
rs1235519382 2370 dbSNP
rs1181377084 2377 dbSNP
rs928385342 2380 dbSNP
rs569777173 2382 dbSNP
rs1259449998 2391 dbSNP
rs945435117 2397 dbSNP
rs1042463591 2398 dbSNP
rs1352299225 2402 dbSNP
rs925301833 2405 dbSNP
rs1055435361 2412 dbSNP
rs1353889216 2422 dbSNP
rs569732751 2427 dbSNP
rs1356537786 2428 dbSNP
rs1043962056 2429 dbSNP
rs528953656 2431 dbSNP
rs1161032106 2444 dbSNP
rs895368239 2456 dbSNP
rs1344654945 2457 dbSNP
rs1013777048 2462 dbSNP
rs1357090791 2473 dbSNP
rs2290977 2477 dbSNP
rs1411828848 2479 dbSNP
rs1303030700 2482 dbSNP
rs747759440 2482 dbSNP
rs886591854 2485 dbSNP
rs901901362 2506 dbSNP
rs565659277 2509 dbSNP
rs1454376383 2512 dbSNP
rs1015340015 2514 dbSNP
rs1191372705 2516 dbSNP
rs1485539004 2517 dbSNP
rs1217233836 2520 dbSNP
rs1242175829 2520 dbSNP
rs1449379066 2524 dbSNP
rs1272100485 2525 dbSNP
rs1233547570 2531 dbSNP
rs1328998077 2532 dbSNP
rs148641473 2542 dbSNP
rs2290976 2543 dbSNP
rs1289984951 2546 dbSNP
rs9816776 2550 dbSNP
rs1325421162 2557 dbSNP
rs1462197250 2563 dbSNP
rs953940991 2567 dbSNP
rs1168342951 2570 dbSNP
rs986609961 2571 dbSNP
rs1420057316 2575 dbSNP
rs1019436457 2581 dbSNP
rs1476727359 2582 dbSNP
rs771790031 2583 dbSNP
rs1213897062 2585 dbSNP
rs978623184 2587 dbSNP
rs958458012 2588 dbSNP
rs1202798233 2590 dbSNP
rs991648579 2592 dbSNP
rs1296874757 2595 dbSNP
rs1216854697 2599 dbSNP
rs1251000997 2607 dbSNP
rs66933062 2629 dbSNP
rs947044845 2640 dbSNP
rs936677600 2645 dbSNP
rs1441895715 2651 dbSNP
rs990799394 2659 dbSNP
rs1178757440 2661 dbSNP
rs71323165 2668 dbSNP
rs1396885930 2674 dbSNP
rs1329564284 2678 dbSNP
rs1461258889 2679 dbSNP
rs977094161 2681 dbSNP
rs1422842207 2682 dbSNP
rs916845430 2682 dbSNP
rs1393952129 2687 dbSNP
rs1193783495 2689 dbSNP
rs1455204586 2690 dbSNP
rs527522425 2695 dbSNP
rs1040525869 2696 dbSNP
rs113773465 2696 dbSNP
rs1480485110 2698 dbSNP
rs1252311224 2711 dbSNP
rs548442775 2718 dbSNP
rs1176409291 2730 dbSNP
rs886645608 2732 dbSNP
rs932051659 2733 dbSNP
rs940860363 2741 dbSNP
rs1305072773 2745 dbSNP
rs1050492507 2747 dbSNP
rs1373750107 2754 dbSNP
rs541918442 2757 dbSNP
rs57179407 2777 dbSNP
rs1014961387 2780 dbSNP
rs763469866 2784 dbSNP
rs1377975481 2795 dbSNP
rs572090238 2796 dbSNP
rs889437642 2799 dbSNP
rs540991813 2800 dbSNP
rs1019488969 2808 dbSNP
rs564822648 2815 dbSNP
rs1179258060 2818 dbSNP
rs1350244788 2819 dbSNP
rs1257380715 2820 dbSNP
rs533410398 2822 dbSNP
rs966981254 2823 dbSNP
rs1259080946 2830 dbSNP
rs1238596686 2834 dbSNP
rs1317808964 2836 dbSNP
rs1273956731 2845 dbSNP
rs1309441916 2846 dbSNP
rs977919547 2850 dbSNP
rs1412629300 2859 dbSNP
rs534653014 2862 dbSNP
rs1354617715 2868 dbSNP
rs774713370 2871 dbSNP
rs958116869 2873 dbSNP
rs762041319 2874 dbSNP
rs760644710 2880 dbSNP
rs1382107356 2888 dbSNP
rs991370309 2894 dbSNP
rs916606611 2895 dbSNP
rs1453864446 2896 dbSNP
rs1365126123 2899 dbSNP
rs2290975 2904 dbSNP
rs1191485827 2909 dbSNP
rs1474409161 2910 dbSNP
rs865843349 2911 dbSNP
rs982393585 2916 dbSNP
rs1396519953 2918 dbSNP
rs563718976 2919 dbSNP
rs1259737946 2921 dbSNP
rs1204563629 2922 dbSNP
rs1252515706 2924 dbSNP
rs1262660242 2924 dbSNP
rs1231717158 2928 dbSNP
rs1447236090 2931 dbSNP
rs1167452051 2933 dbSNP
rs908090061 2941 dbSNP
rs546610806 2942 dbSNP
rs529029027 2943 dbSNP
rs549086583 2953 dbSNP
rs977028804 2964 dbSNP
rs1348644151 2972 dbSNP
rs760788743 2980 dbSNP
rs898257928 2981 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cuuucccgAAGGGAAACGUc 5'
                  | |:||||||| 
Target 5' -----uuaUACUCUUUGCAc 3'
 		1 - 15
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 92999.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 3 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 92999.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM545212
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / Control
Location of target site ENST00000457842.3 | 3UTR | UUAUACUCUUUGCACCUUAAACCCCCACCACU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000457842.3 | 3UTR | UUAUACUCUUUGCACCUUAAACCCCCACCACUCCCCGAC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000457842.3 | 3UTR | UUAUACUCUUUGCACCUUAAACCCCCACCACUCCCCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 4 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000457842.3 | 3UTR | UUAUACUCUUUGCACCUUAAACCCCCACCACUCCCCGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE19350 CNS germ cell tumors 0.409 9.3e-2 0.510 4.5e-2 12 Click to see details
GSE21849 B cell lymphoma 0.186 1.7e-1 0.456 6.5e-3 29 Click to see details
GSE27834 Pluripotent stem cells 0.223 2.0e-1 0.288 1.4e-1 16 Click to see details
GSE17306 Multiple myeloma 0.065 3.3e-1 0.030 4.2e-1 49 Click to see details
GSE21687 Ependynoma primary tumors 0.052 3.4e-1 0.010 4.7e-1 64 Click to see details
GSE21687 Ependynoma primary tumors 0.052 3.4e-1 0.010 4.7e-1 64 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
HNSC -0.989 0.05 -0.500 0.33 3 Click to see details
BRCA 0.173 0.44 0.500 0.33 3 Click to see details
BRCA 0.173 0.44 0.500 0.33 3 Click to see details
BRCA 0.173 0.44 0.500 0.33 3 Click to see details
BRCA 0.173 0.44 0.500 0.33 3 Click to see details
BRCA 0.173 0.44 0.500 0.33 3 Click to see details
147 hsa-miR-527 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT060824 CEP350 centrosomal protein 350 2 2
MIRT072483 RAB8B RAB8B, member RAS oncogene family 2 2
MIRT076139 WDR81 WD repeat domain 81 2 2
MIRT076234 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 6
MIRT082393 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 4
MIRT090337 SEC61A1 Sec61 translocon alpha 1 subunit 2 8
MIRT091944 ZBTB47 zinc finger and BTB domain containing 47 2 6
MIRT092026 ABHD5 abhydrolase domain containing 5 2 6
MIRT095382 UBE2D2 ubiquitin conjugating enzyme E2 D2 2 2
MIRT142425 TNRC6A trinucleotide repeat containing 6A 2 6
MIRT149879 LDLR low density lipoprotein receptor 2 2
MIRT168657 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT178932 C11ORF57 chromosome 11 open reading frame 57 2 2
MIRT179071 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 6
MIRT193029 TMOD3 tropomodulin 3 2 8
MIRT195759 ATMIN ATM interactor 2 6
MIRT210002 LIMD1 LIM domains containing 1 2 2
MIRT211286 ANKRD50 ankyrin repeat domain 50 2 2
MIRT217609 NUS1 NUS1 dehydrodolichyl diphosphate synthase subunit 2 2
MIRT230981 PRRG4 proline rich and Gla domain 4 2 2
MIRT248251 SP1 Sp1 transcription factor 5 2
MIRT249363 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT257800 CDC5L cell division cycle 5 like 2 4
MIRT267985 UCK2 uridine-cytidine kinase 2 2 2
MIRT301222 SH3BP4 SH3 domain binding protein 4 2 2
MIRT312574 G3BP1 G3BP stress granule assembly factor 1 2 4
MIRT315533 MARCKS myristoylated alanine rich protein kinase C substrate 2 2
MIRT343049 ABHD2 abhydrolase domain containing 2 2 2
MIRT442634 TBC1D12 TBC1 domain family member 12 2 2
MIRT443424 MAPT microtubule associated protein tau 2 2
MIRT444152 ZNF701 zinc finger protein 701 2 2
MIRT444500 ZNF525 zinc finger protein 525 2 2
MIRT445202 CRYBG3 crystallin beta-gamma domain containing 3 2 2
MIRT447063 MCC mutated in colorectal cancers 2 4
MIRT448125 CCDC80 coiled-coil domain containing 80 2 2
MIRT460407 TNFRSF10B TNF receptor superfamily member 10b 2 4
MIRT462940 ZNF800 zinc finger protein 800 2 12
MIRT463575 ZBTB38 zinc finger and BTB domain containing 38 2 2
MIRT466373 TGOLN2 trans-golgi network protein 2 2 4
MIRT469270 RHOB ras homolog family member B 2 8
MIRT469300 RGS16 regulator of G protein signaling 16 2 2
MIRT469803 RAB14 RAB14, member RAS oncogene family 2 2
MIRT470062 PTGES2 prostaglandin E synthase 2 2 2
MIRT470993 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT474950 KCTD10 potassium channel tetramerization domain containing 10 2 4
MIRT475188 IMPDH1P11 inosine monophosphate dehydrogenase 1 pseudogene 11 2 6
MIRT475863 H3F3C H3 histone family member 3C 2 10
MIRT475897 H3F3B H3 histone family member 3B 2 8
MIRT481939 ANKRD11 ankyrin repeat domain 11 2 2
MIRT485555 FOXQ1 forkhead box Q1 2 2
MIRT491003 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT492191 SOCS1 suppressor of cytokine signaling 1 2 4
MIRT493271 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT495272 NICN1 nicolin 1 2 4
MIRT495674 PRKD3 protein kinase D3 2 2
MIRT497540 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT500397 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500483 ZBTB4 zinc finger and BTB domain containing 4 2 6
MIRT500585 UQCRFS1 ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 2 4
MIRT500634 TUBB2A tubulin beta 2A class IIa 2 8
MIRT501640 PHLDA3 pleckstrin homology like domain family A member 3 2 2
MIRT501768 NRBF2 nuclear receptor binding factor 2 2 6
MIRT503665 SLC46A1 solute carrier family 46 member 1 2 2
MIRT504321 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT505176 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT506340 NUP54 nucleoporin 54 2 6
MIRT506434 NACC2 NACC family member 2 2 2
MIRT506666 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT510973 PFN2 profilin 2 2 6
MIRT511141 MRPL17 mitochondrial ribosomal protein L17 2 8
MIRT512600 EFCAB1 EF-hand calcium binding domain 1 2 4
MIRT521036 SLC30A4 solute carrier family 30 member 4 2 2
MIRT525735 SOD2 superoxide dismutase 2 2 2
MIRT526750 GAS7 growth arrest specific 7 2 2
MIRT526902 ZNF772 zinc finger protein 772 2 6
MIRT527345 FAM69C family with sequence similarity 69 member C 2 2
MIRT531900 GLP2R glucagon like peptide 2 receptor 2 2
MIRT532366 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT534252 SLC12A7 solute carrier family 12 member 7 2 2
MIRT534743 RAVER2 ribonucleoprotein, PTB binding 2 2 4
MIRT535340 PFN1 profilin 1 2 2
MIRT535971 MESDC1 talin rod domain containing 1 2 2
MIRT536507 KCTD15 potassium channel tetramerization domain containing 15 2 2
MIRT536884 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT537038 GRAMD4 GRAM domain containing 4 2 2
MIRT537424 FBXL7 F-box and leucine rich repeat protein 7 2 2
MIRT544577 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT546422 SNX5 sorting nexin 5 2 2
MIRT546753 RLIM ring finger protein, LIM domain interacting 2 2
MIRT547984 HCFC2 host cell factor C2 2 4
MIRT548407 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 2
MIRT549444 ACSL4 acyl-CoA synthetase long chain family member 4 2 2
MIRT549670 ZNF598 zinc finger protein 598 2 2
MIRT550525 MYZAP myocardial zonula adherens protein 2 2
MIRT551213 CIDEC cell death inducing DFFA like effector c 2 2
MIRT552306 ZXDA zinc finger, X-linked, duplicated A 2 4
MIRT552429 ZNF460 zinc finger protein 460 2 2
MIRT553197 UBE2A ubiquitin conjugating enzyme E2 A 2 2
MIRT553336 TRPC3 transient receptor potential cation channel subfamily C member 3 2 4
MIRT554806 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555179 PRUNE2 prune homolog 2 2 2
MIRT556150 MECP2 methyl-CpG binding protein 2 2 2
MIRT557862 FGFR1OP FGFR1 oncogene partner 2 2
MIRT562084 KIAA0895 KIAA0895 2 2
MIRT563331 RPLP0 ribosomal protein lateral stalk subunit P0 2 2
MIRT565308 TMEM41A transmembrane protein 41A 2 2
MIRT566134 RACGAP1 Rac GTPase activating protein 1 2 2
MIRT567023 KLHL15 kelch like family member 15 2 2
MIRT567241 HSPA13 heat shock protein family A (Hsp70) member 13 2 2
MIRT568559 AKAP10 A-kinase anchoring protein 10 2 2
MIRT570682 FZD5 frizzled class receptor 5 2 2
MIRT572220 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT573304 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT575741 Zfp618 zinc finger protein 618 1 1
MIRT613460 B3GNT6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 2 2
MIRT614733 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT615117 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT623237 MLLT6 MLLT6, PHD finger containing 2 2
MIRT623486 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT623989 FAM104A family with sequence similarity 104 member A 2 2
MIRT624010 EPHB1 EPH receptor B1 2 2
MIRT626277 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT631415 CRLS1 cardiolipin synthase 1 2 4
MIRT641134 ZBTB33 zinc finger and BTB domain containing 33 2 2
MIRT647829 RAB23 RAB23, member RAS oncogene family 2 2
MIRT649063 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT650283 PYCARD PYD and CARD domain containing 2 2
MIRT651511 WNT4 Wnt family member 4 2 2
MIRT651851 UNC5D unc-5 netrin receptor D 2 2
MIRT652214 TRIM33 tripartite motif containing 33 2 2
MIRT654703 PRRC2B proline rich coiled-coil 2B 2 2
MIRT656792 KNTC1 kinetochore associated 1 2 2
MIRT656925 KIAA1462 junctional cadherin 5 associated 2 2
MIRT659157 DCTN5 dynactin subunit 5 2 2
MIRT663085 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT676043 AUTS8 Autism, susceptibility to, 8 2 2
MIRT680128 ADRBK2 G protein-coupled receptor kinase 3 2 2
MIRT689530 KIAA0513 KIAA0513 2 2
MIRT691473 FOXRED2 FAD dependent oxidoreductase domain containing 2 2 2
MIRT692504 SPIN4 spindlin family member 4 2 2
MIRT702404 KITLG KIT ligand 2 2
MIRT704531 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT714230 ARMC10 armadillo repeat containing 10 2 2
MIRT718760 HOOK3 hook microtubule tethering protein 3 2 2
MIRT725421 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 2
MIRT732824 PCNA proliferating cell nuclear antigen 3 0
MIRT734767 GPC3 glypican 3 2 0

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