miRTarBase - #MIRT111451


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pre-miRNA Information
pre-miRNA hsa-mir-6809   
Genomic Coordinates chr2: 217900513 - 217900628
Description Homo sapiens miR-6809 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6809-3p
Sequence 96| CUUCUCUUCUCUCCUUCCCAG |116
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs755634163 1 dbSNP
rs1312617571 9 dbSNP
rs1345275794 10 dbSNP
rs1175271401 19 dbSNP
rs113090389 21 dbSNP
Putative Targets

Gene Information
Gene Symbol UBE2Q1   
Synonyms GTAP, NICE-5, NICE5, PRO3094, UBE2Q
Description ubiquitin conjugating enzyme E2 Q1
Transcript NM_017582   
Expression
Putative miRNA Targets on UBE2Q1
3'UTR of UBE2Q1
(miRNA target sites are highlighted)		 
>UBE2Q1|NM_017582|3'UTR
   1 CCCTGGAGTATCACCCTTCCTCCCTCCCCAGGCACCACTGGACCAATTACCTTTGAATGCTGTATTTGGATCTCACGCTG
  81 CCTCTGTGGTTCCCTCCCTCATTTTTCCTGGACGTGATAGCTCTGCCTATTGCAGGACAATGATGGCTATTCTAAACGCT
 161 AAGGAAAAAAAACAAACACAGAACTGTTTCAAGTACTCAAGACTGACTTACAGACCAACCAACCACCTTGCTGGAACCCT
 241 TGCTAGCAGGCATTCTTATAAAAGAAACTTTCGAGCCTCCTTATATTGCTGGAAACTCAGCTGTGCTCCAGACTAGAGCC
 321 TCCTTACCTATGCTATGGATTTTTAATTTATTTTCTCTTATTTCATGTACACTGCTTTTTTTGGTTACAGTGTATGATGG
 401 ATGTGTATGAAAAAAATGTATCTTTGGGAAAACAATTACAGTTTGTTAATTTGAAGATGCTGGTCTTGACTCATCTTTAT
 481 TTTTATTCGCACATCCCACCCCATCCCCTGAACTACTTGGGAGGTGGGGAGGGGTACGAGTCCACTGTTGCTTTGGTAGA
 561 GATGAGAGGCCGCATTTTGCTGCTAAAGCAAGAGAAACTTGGAGCTGAAGCACACACCTGGTCTGCCCCTAGATTTCTCC
 641 TCAAGGCCTCTGGAGCAACCAGCACTTGCCCCCTTGGAATGCAGAGCCTGGCCTGCCAAACTACAATGTGGTAGGCTGAA
 721 ACGATGGTGTTAATTCTTAGGACTACTTTTCTAGTCACAGATGTTTTCAAATTTCTAAGAAAAAGAAAATGAGGCTCAAG
 801 AGGCTGCTTCGTAGAATTCCTTTTGAATGAATTGAGTGGGGATGGGGACACAGTCTCCAAGTGTGTATGTGGTCTTTTCT
 881 GATCTCAGCTGTGTGGCTGCAACTCTTCGCTGTTCATTGGTTCCTCTCCTGGAAAGTGGCTTCTAACCAGCACTGGATGG
 961 TGATCATTGGTAAGCTTTGCTCACCTCCCTCTCTCTTGCTTCATTTGGCTTTATCAAAAAGAACAGACCTAGCTCTGAAT
1041 TTGTTTGGCTTGGGAAATTATGGATTCTTTCAAGCCACTCCCACAAGGTGGGTCCTACTAGAAAGGGTTAGCATTTTAAG
1121 GGGGGTTGTTCTATACACCTGTGTCCTTACCCCAGGCTCAGGAACTGCCAGGGAGGGAAGATGAGGTGGGGAGTCTGTAC
1201 TGAGATGGAACTGTCAGTGCTGTGTTGTATGTACTTGCTGTTGTAAAAGTTTGGGCATGACTTTGCATCTAGCGGGTGCT
1281 GCCTGCATCTCTTTGTCTGTAAGCTTGCTCTGGGACTCAGCCTCTTAGGACCTACGATGCCAGCAGCTCTCATTAACAGT
1361 GAAATGACAGAGGCCAAAGATGGCCAAGTGAAGACCCAAGTCTCAGAAAACCCAGACTTGGGACAACTGCCTGGGAACTA
1441 GGATGCTAGAGCAGTTCTGTAATGCTTTGAGACACAGCAATTTTCACATTGGCCATTCTTTCCCCTCCCCTACCCCTTTT
1521 CTTTTGAGGGACTTTTAATGTTTGCTGCTTTAGGTGGATGGAGAGTCCACCAGTCCCACTCAATGCTGCTCTAACTCTAC
1601 CCACACCCACCTAATTAGGGGTGCTAATAAAACATGCTGAGGTTGAGATAAAGACGGGACATAAGGGGAAAATTCATTCC
1681 ATAGAGCTGAAATCTGGTTTTCAAGGCCTCTGTGGCTTTCTTCTGAACTTACCACCAGCCCTGGCTGGAATGTAGATTGT
1761 GTTTTTAGTAATGTGTACTGTGAGCTGTCTTCTGTATAATGTATTTTGTAATGTATTTTTCTCATCTACCAAAGGATGAA
1841 ACAAATAAAATTATTTAAATAGT
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gacccuuccUCUC-UUCUCUUc 5'
                   | || ||||||| 
Target 5' tttgctgctAAAGCAAGAGAAa 3'
 576 - 597 144.00 -6.84
2 
miRNA  3' gaccCU-UCCUCUCUUCUCUUc 5'
              || :||| | |||:|:| 
Target 5' taaaGACGGGACATAAGGGGAa 3'
 1649 - 1670 125.00 -9.93
3 
miRNA  3' gacccUUCCUCUCUUCUCUUc 5'
               |:||||:||||| :| 
Target 5' ctgccAGGGAGGGAAGATGAg 3'
 1165 - 1185 124.00 -22.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30486377 23 COSMIC
COSN30486327 24 COSMIC
COSN27000911 36 COSMIC
COSN30487418 92 COSMIC
COSN24389333 95 COSMIC
COSN511407 98 COSMIC
COSN27000910 112 COSMIC
COSN31597660 120 COSMIC
COSN31569089 147 COSMIC
COSN30144846 160 COSMIC
COSN30502563 164 COSMIC
COSN16642735 191 COSMIC
COSN21587817 355 COSMIC
COSN31531441 369 COSMIC
COSN26634773 407 COSMIC
COSN30174615 723 COSMIC
COSN16932864 810 COSMIC
COSN31543114 820 COSMIC
COSN31544456 914 COSMIC
COSN22459919 926 COSMIC
COSN24370584 1098 COSMIC
COSN15805555 1433 COSMIC
COSN31523183 1559 COSMIC
COSN30544888 1640 COSMIC
rs72698179 520 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs778241954 2 dbSNP
rs756683446 4 dbSNP
rs1368143781 11 dbSNP
rs1276569088 16 dbSNP
rs200727272 17 dbSNP
rs749126982 19 dbSNP
rs1433982005 20 dbSNP
rs1486477875 25 dbSNP
rs752140708 27 dbSNP
rs1332273736 29 dbSNP
rs956809619 30 dbSNP
rs535050749 31 dbSNP
rs374327419 32 dbSNP
rs1169752496 33 dbSNP
rs780584484 35 dbSNP
rs1404026046 38 dbSNP
rs1427807226 42 dbSNP
rs377431468 46 dbSNP
rs777645460 47 dbSNP
rs754611046 49 dbSNP
rs1368472473 62 dbSNP
rs567606873 64 dbSNP
rs1436891417 76 dbSNP
rs1313700783 77 dbSNP
rs1354596068 81 dbSNP
rs1412625396 89 dbSNP
rs779496363 101 dbSNP
rs1326906740 108 dbSNP
rs1039959292 109 dbSNP
rs11542156 113 dbSNP
rs770663039 114 dbSNP
rs1473303739 115 dbSNP
rs1411993595 127 dbSNP
rs888610465 134 dbSNP
rs1485565393 143 dbSNP
rs1048624507 153 dbSNP
rs1264273870 155 dbSNP
rs751424713 164 dbSNP
rs929694043 165 dbSNP
rs548995590 169 dbSNP
rs1054395053 170 dbSNP
rs1181026107 172 dbSNP
rs1174500317 173 dbSNP
rs935802084 173 dbSNP
rs1375032800 175 dbSNP
rs1432657995 178 dbSNP
rs1471403326 179 dbSNP
rs763788053 180 dbSNP
rs879558963 181 dbSNP
rs1293279321 183 dbSNP
rs1381633463 183 dbSNP
rs1269992544 188 dbSNP
rs1210789175 190 dbSNP
rs1234327368 192 dbSNP
rs142404600 194 dbSNP
rs1345356898 197 dbSNP
rs1240703707 201 dbSNP
rs1264238013 207 dbSNP
rs867339545 209 dbSNP
rs1329952744 212 dbSNP
rs148769170 217 dbSNP
rs1205077744 219 dbSNP
rs369036763 220 dbSNP
rs965761847 222 dbSNP
rs1431703825 230 dbSNP
rs1057173955 231 dbSNP
rs911651934 237 dbSNP
rs551595599 250 dbSNP
rs145281733 252 dbSNP
rs950407328 253 dbSNP
rs1452695597 258 dbSNP
rs1226861107 259 dbSNP
rs1287073984 267 dbSNP
rs1347603883 268 dbSNP
rs559331829 272 dbSNP
rs541211117 273 dbSNP
rs1026287559 276 dbSNP
rs1368141616 277 dbSNP
rs529237726 279 dbSNP
rs1225173611 284 dbSNP
rs561940668 285 dbSNP
rs1389696781 301 dbSNP
rs926988703 306 dbSNP
rs1238732946 308 dbSNP
rs963315341 311 dbSNP
rs980033741 314 dbSNP
rs1458695954 316 dbSNP
rs1214834938 317 dbSNP
rs14689 327 dbSNP
rs543711949 328 dbSNP
rs576121605 329 dbSNP
rs564067284 332 dbSNP
rs1487511857 339 dbSNP
rs1179171859 342 dbSNP
rs1251458159 354 dbSNP
rs762683549 356 dbSNP
rs1418303422 357 dbSNP
rs1156742858 358 dbSNP
rs1419722647 360 dbSNP
rs1388819241 363 dbSNP
rs1157757408 374 dbSNP
rs1164111268 375 dbSNP
rs1034522819 391 dbSNP
rs545581731 394 dbSNP
rs150005293 398 dbSNP
rs1443661701 402 dbSNP
rs1298423334 404 dbSNP
rs914388062 405 dbSNP
rs907251523 407 dbSNP
rs988622388 409 dbSNP
rs1045853072 411 dbSNP
rs956759085 415 dbSNP
rs1234503832 417 dbSNP
rs1273028678 417 dbSNP
rs1031091994 425 dbSNP
rs1206649300 427 dbSNP
rs1251938834 441 dbSNP
rs1010217105 446 dbSNP
rs1265641152 448 dbSNP
rs998555183 451 dbSNP
rs1259420617 459 dbSNP
rs891806148 465 dbSNP
rs1054891031 466 dbSNP
rs1465737436 468 dbSNP
rs1018726609 475 dbSNP
rs1007136067 485 dbSNP
rs1206875760 488 dbSNP
rs935913840 489 dbSNP
rs1357761122 496 dbSNP
rs1256840651 500 dbSNP
rs551472058 502 dbSNP
rs1284143733 506 dbSNP
rs1377682780 509 dbSNP
rs1232743553 513 dbSNP
rs1038810991 519 dbSNP
rs72698179 520 dbSNP
rs1300899769 521 dbSNP
rs994353257 523 dbSNP
rs1203297029 524 dbSNP
rs1437261502 526 dbSNP
rs896865872 529 dbSNP
rs1209829378 535 dbSNP
rs1312097921 537 dbSNP
rs1235502033 539 dbSNP
rs911620976 544 dbSNP
rs983179643 548 dbSNP
rs929077098 555 dbSNP
rs776260633 572 dbSNP
rs1418247409 596 dbSNP
rs1319352282 642 dbSNP
rs1175156937 643 dbSNP
rs535200896 644 dbSNP
rs573869515 648 dbSNP
rs973517569 650 dbSNP
rs773053652 651 dbSNP
rs551907029 659 dbSNP
rs1289905526 663 dbSNP
rs187327906 665 dbSNP
rs11265634 666 dbSNP
rs971574444 671 dbSNP
rs1170856945 685 dbSNP
rs1348933641 686 dbSNP
rs914502480 698 dbSNP
rs1276329815 699 dbSNP
rs1448507843 701 dbSNP
rs1450689200 706 dbSNP
rs1024364712 709 dbSNP
rs748015293 715 dbSNP
rs988570214 722 dbSNP
rs1195007559 723 dbSNP
rs1247912548 726 dbSNP
rs1187180201 729 dbSNP
rs934514727 749 dbSNP
rs569718174 750 dbSNP
rs773638300 754 dbSNP
rs923137279 760 dbSNP
rs180888701 763 dbSNP
rs1328055084 789 dbSNP
rs1371816943 790 dbSNP
rs1436105228 790 dbSNP
rs1200095215 793 dbSNP
rs1343120440 794 dbSNP
rs1273247870 803 dbSNP
rs748429483 805 dbSNP
rs539588895 811 dbSNP
rs891897107 814 dbSNP
rs1033010823 820 dbSNP
rs1000614768 824 dbSNP
rs566148347 828 dbSNP
rs1253148364 830 dbSNP
rs900378938 831 dbSNP
rs543644892 832 dbSNP
rs1341751434 834 dbSNP
rs1038949412 839 dbSNP
rs985478672 841 dbSNP
rs1411652261 843 dbSNP
rs1395148529 844 dbSNP
rs1167725492 846 dbSNP
rs1395331947 847 dbSNP
rs1399576719 848 dbSNP
rs1310280697 850 dbSNP
rs1404775745 850 dbSNP
rs141683551 853 dbSNP
rs372332484 853 dbSNP
rs1337802708 854 dbSNP
rs1443163314 858 dbSNP
rs1287559925 859 dbSNP
rs944516666 861 dbSNP
rs1235073108 865 dbSNP
rs755828885 868 dbSNP
rs1273662668 874 dbSNP
rs1027250277 882 dbSNP
rs994457932 890 dbSNP
rs1389885352 898 dbSNP
rs964265248 901 dbSNP
rs890274460 907 dbSNP
rs188316657 908 dbSNP
rs1047577928 909 dbSNP
rs778949596 911 dbSNP
rs1419166574 922 dbSNP
rs529121739 923 dbSNP
rs375527156 928 dbSNP
rs929069623 935 dbSNP
rs1161573480 946 dbSNP
rs1440950424 948 dbSNP
rs1254285276 950 dbSNP
rs920373683 959 dbSNP
rs1206080826 960 dbSNP
rs1483269756 966 dbSNP
rs1307588298 968 dbSNP
rs1368474569 972 dbSNP
rs1273570211 975 dbSNP
rs1212808105 997 dbSNP
rs1339855402 998 dbSNP
rs1358358573 999 dbSNP
rs1271500519 1003 dbSNP
rs561829309 1007 dbSNP
rs1002607339 1014 dbSNP
rs1271960221 1017 dbSNP
rs973057053 1021 dbSNP
rs905626973 1026 dbSNP
rs1044009542 1028 dbSNP
rs146309319 1029 dbSNP
rs1423808481 1032 dbSNP
rs1186026004 1037 dbSNP
rs1243389653 1041 dbSNP
rs1175086818 1049 dbSNP
rs1475742837 1058 dbSNP
rs531587191 1059 dbSNP
rs1352971810 1061 dbSNP
rs1388500738 1062 dbSNP
rs1436794275 1063 dbSNP
rs947061347 1067 dbSNP
rs980362602 1068 dbSNP
rs1394279279 1070 dbSNP
rs911356467 1071 dbSNP
rs893017009 1078 dbSNP
rs1052963647 1080 dbSNP
rs971666197 1081 dbSNP
rs183652387 1083 dbSNP
rs1294981925 1100 dbSNP
rs1349645127 1106 dbSNP
rs1024458107 1111 dbSNP
rs1370341017 1119 dbSNP
rs1199247999 1121 dbSNP
rs1264423422 1122 dbSNP
rs1465417406 1123 dbSNP
rs1163241780 1126 dbSNP
rs1327262120 1126 dbSNP
rs1407621823 1127 dbSNP
rs1188061796 1130 dbSNP
rs923117156 1131 dbSNP
rs1163147261 1135 dbSNP
rs1471865150 1136 dbSNP
rs545771506 1140 dbSNP
rs989016038 1150 dbSNP
rs778945748 1154 dbSNP
rs1472386633 1155 dbSNP
rs35462972 1156 dbSNP
rs956139697 1170 dbSNP
rs911325078 1175 dbSNP
rs1033515588 1179 dbSNP
rs1000179281 1188 dbSNP
rs572076774 1191 dbSNP
rs1453293497 1196 dbSNP
rs1290542307 1206 dbSNP
rs1318028329 1209 dbSNP
rs1017590751 1216 dbSNP
rs1008750952 1217 dbSNP
rs890412144 1226 dbSNP
rs1312006776 1229 dbSNP
rs952695367 1239 dbSNP
rs1262841673 1249 dbSNP
rs560216609 1249 dbSNP
rs993743791 1257 dbSNP
rs972964184 1264 dbSNP
rs961952774 1265 dbSNP
rs1469836569 1267 dbSNP
rs1035839018 1268 dbSNP
rs755166786 1273 dbSNP
rs1431254115 1274 dbSNP
rs1183789136 1287 dbSNP
rs1228700654 1293 dbSNP
rs542884329 1295 dbSNP
rs969798818 1295 dbSNP
rs749407547 1297 dbSNP
rs1278184666 1309 dbSNP
rs541492258 1310 dbSNP
rs34751969 1315 dbSNP
rs1461470482 1316 dbSNP
rs1292603275 1322 dbSNP
rs780105858 1327 dbSNP
rs41269915 1330 dbSNP
rs1046118504 1331 dbSNP
rs1351475215 1335 dbSNP
rs1228335474 1336 dbSNP
rs563376516 1338 dbSNP
rs1337085294 1339 dbSNP
rs763955147 1344 dbSNP
rs367891493 1346 dbSNP
rs1264919870 1349 dbSNP
rs543507174 1358 dbSNP
rs1323491858 1368 dbSNP
rs917537209 1372 dbSNP
rs1040180680 1376 dbSNP
rs988956505 1381 dbSNP
rs1252286798 1388 dbSNP
rs956424209 1394 dbSNP
rs911272891 1396 dbSNP
rs1424303123 1399 dbSNP
rs368678603 1403 dbSNP
rs931411787 1406 dbSNP
rs752418420 1449 dbSNP
rs1308200228 1463 dbSNP
rs1371564972 1464 dbSNP
rs1159978859 1469 dbSNP
rs919905299 1480 dbSNP
rs764849397 1485 dbSNP
rs1017556609 1489 dbSNP
rs759256110 1493 dbSNP
rs1312166606 1498 dbSNP
rs577648512 1502 dbSNP
rs1478900944 1505 dbSNP
rs1206890562 1507 dbSNP
rs557762149 1508 dbSNP
rs1482617121 1511 dbSNP
rs1202820401 1515 dbSNP
rs1259315678 1526 dbSNP
rs576664655 1529 dbSNP
rs1181196206 1530 dbSNP
rs1026189785 1535 dbSNP
rs557900903 1540 dbSNP
rs899006897 1542 dbSNP
rs1429707368 1546 dbSNP
rs765929231 1557 dbSNP
rs1168872564 1560 dbSNP
rs1389120619 1561 dbSNP
rs761268543 1575 dbSNP
rs1002340227 1579 dbSNP
rs539798117 1583 dbSNP
rs1427402799 1584 dbSNP
rs1306612658 1589 dbSNP
rs904980714 1593 dbSNP
rs1361259129 1596 dbSNP
rs1449407275 1605 dbSNP
rs757619589 1621 dbSNP
rs565906786 1623 dbSNP
rs1208776824 1631 dbSNP
rs879083861 1639 dbSNP
rs773547808 1649 dbSNP
rs1298390621 1650 dbSNP
rs547884331 1650 dbSNP
rs1023123469 1651 dbSNP
rs80272215 1655 dbSNP
rs568263406 1656 dbSNP
rs1235615465 1657 dbSNP
rs1486578706 1661 dbSNP
rs1188683408 1664 dbSNP
rs1246854240 1666 dbSNP
rs1447341727 1668 dbSNP
rs1175060526 1674 dbSNP
rs1427717004 1676 dbSNP
rs1053794464 1681 dbSNP
rs934960089 1682 dbSNP
rs1274623388 1692 dbSNP
rs772504418 1695 dbSNP
rs1439409304 1706 dbSNP
rs1176018875 1715 dbSNP
rs549995735 1732 dbSNP
rs1031275866 1733 dbSNP
rs998941387 1735 dbSNP
rs978991997 1746 dbSNP
rs1321353587 1763 dbSNP
rs1364543576 1767 dbSNP
rs534319644 1768 dbSNP
rs1343461963 1778 dbSNP
rs1345478904 1782 dbSNP
rs531673703 1784 dbSNP
rs1415190563 1785 dbSNP
rs1276203622 1791 dbSNP
rs1318706374 1794 dbSNP
rs1425692180 1796 dbSNP
rs878915023 1799 dbSNP
rs1172770405 1800 dbSNP
rs1209258433 1801 dbSNP
rs1452558905 1806 dbSNP
rs1007517520 1810 dbSNP
rs1195139486 1820 dbSNP
rs564387511 1821 dbSNP
rs1246888516 1831 dbSNP
rs775222125 1854 dbSNP
rs1423489914 1858 dbSNP
rs139414697 1859 dbSNP
rs1160469553 1862 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000292211.4 | 3UTR | GCAAGAGAAACUUGGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
310 hsa-miR-6809-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT063208 ADIPOR2 adiponectin receptor 2 2 2
MIRT111451 UBE2Q1 ubiquitin conjugating enzyme E2 Q1 2 2
MIRT191172 PTCH2 patched 2 2 8
MIRT279711 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 4
MIRT294087 ZNF616 zinc finger protein 616 2 4
MIRT316917 ATXN1 ataxin 1 2 2
MIRT317590 NUDT3 nudix hydrolase 3 2 2
MIRT356077 OTUD4 OTU deubiquitinase 4 2 4
MIRT388055 POU2F2 POU class 2 homeobox 2 2 2
MIRT396148 CDK6 cyclin dependent kinase 6 2 4
MIRT443398 HMX3 H6 family homeobox 3 2 2
MIRT443916 ZNF99 zinc finger protein 99 2 6
MIRT448002 HLA-DOA major histocompatibility complex, class II, DO alpha 2 2
MIRT450587 ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 2 2
MIRT468227 SGK1 serum/glucocorticoid regulated kinase 1 2 2
MIRT471552 PATL1 PAT1 homolog 1, processing body mRNA decay factor 2 6
MIRT472651 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 4
MIRT483900 GNB1L G protein subunit beta 1 like 2 6
MIRT489671 CYP1A1 cytochrome P450 family 1 subfamily A member 1 2 2
MIRT492162 STAT3 signal transducer and activator of transcription 3 2 2
MIRT495196 EDN3 endothelin 3 2 2
MIRT497429 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT498330 PRELID2 PRELI domain containing 2 2 2
MIRT499475 ZNF669 zinc finger protein 669 2 8
MIRT500248 ZNF791 zinc finger protein 791 2 8
MIRT500289 ZNF667 zinc finger protein 667 2 4
MIRT500533 XPO4 exportin 4 2 2
MIRT507225 FOXN2 forkhead box N2 2 4
MIRT507516 DSTN destrin, actin depolymerizing factor 2 4
MIRT512060 DEK DEK proto-oncogene 2 6
MIRT513379 TUBB4A tubulin beta 4A class IVa 2 2
MIRT514671 ZNF701 zinc finger protein 701 2 4
MIRT515157 ZNF90 zinc finger protein 90 2 2
MIRT530860 TRUB1 TruB pseudouridine synthase family member 1 2 2
MIRT535206 PKIA cAMP-dependent protein kinase inhibitor alpha 2 2
MIRT535873 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT537362 FIGN fidgetin, microtubule severing factor 2 2
MIRT544397 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT545008 ZNF439 zinc finger protein 439 2 2
MIRT549707 NUP37 nucleoporin 37 2 2
MIRT550780 VAV3 vav guanine nucleotide exchange factor 3 2 2
MIRT551779 ZNF117 zinc finger protein 117 2 4
MIRT553355 TRIM8 tripartite motif containing 8 2 2
MIRT553595 TMCO1 transmembrane and coiled-coil domains 1 2 6
MIRT554594 RRAGC Ras related GTP binding C 2 2
MIRT556808 KIAA1161 myogenesis regulating glycosidase (putative) 2 4
MIRT559784 ZNF415 zinc finger protein 415 2 2
MIRT559798 ZNF468 zinc finger protein 468 2 4
MIRT559807 ZNF83 zinc finger protein 83 2 4
MIRT560159 ZNF286A zinc finger protein 286A 2 2
MIRT562225 HMGB2 high mobility group box 2 2 2
MIRT562801 ZNF611 zinc finger protein 611 2 2
MIRT563958 ZNF431 zinc finger protein 431 2 2
MIRT564730 ZNF23 zinc finger protein 23 2 2
MIRT564743 ZNF207 zinc finger protein 207 2 2
MIRT567299 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT568280 BCOR BCL6 corepressor 2 2
MIRT571531 ZNF286B zinc finger protein 286B 2 2
MIRT576781 Thbs1 thrombospondin 1 2 2
MIRT607122 MARCH4 membrane associated ring-CH-type finger 4 2 2
MIRT607270 IL5RA interleukin 5 receptor subunit alpha 2 4
MIRT607273 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 4
MIRT607283 CD300E CD300e molecule 2 4
MIRT607352 TNS1 tensin 1 2 6
MIRT609192 CDH8 cadherin 8 2 2
MIRT609528 ADPRH ADP-ribosylarginine hydrolase 2 2
MIRT609656 ITIH5 inter-alpha-trypsin inhibitor heavy chain family member 5 2 2
MIRT609683 EMX2 empty spiracles homeobox 2 2 2
MIRT609765 PLCL1 phospholipase C like 1 (inactive) 2 2
MIRT610048 MYBPC1 myosin binding protein C, slow type 2 2
MIRT610531 FAM46A family with sequence similarity 46 member A 2 4
MIRT610731 NFIX nuclear factor I X 2 4
MIRT611983 WDR59 WD repeat domain 59 2 2
MIRT612079 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT612498 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT613452 ZFX zinc finger protein, X-linked 2 2
MIRT613562 YY2 YY2 transcription factor 2 2
MIRT613686 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613735 GK5 glycerol kinase 5 (putative) 2 2
MIRT614172 FAM53B family with sequence similarity 53 member B 2 2
MIRT614190 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT614508 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT614817 PVRL4 nectin cell adhesion molecule 4 2 2
MIRT615671 NAV2 neuron navigator 2 2 2
MIRT615926 RNF157 ring finger protein 157 2 2
MIRT615967 ASCL1 achaete-scute family bHLH transcription factor 1 2 2
MIRT616393 TRIM10 tripartite motif containing 10 2 2
MIRT617307 FAM9C family with sequence similarity 9 member C 2 2
MIRT617599 SHOX2 short stature homeobox 2 2 2
MIRT617648 RWDD1 RWD domain containing 1 2 2
MIRT617768 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT618105 OPRM1 opioid receptor mu 1 2 2
MIRT618218 CST3 cystatin C 2 2
MIRT618636 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT619092 IFI44L interferon induced protein 44 like 2 2
MIRT619353 CFHR5 complement factor H related 5 2 2
MIRT619904 FAM43B family with sequence similarity 43 member B 2 2
MIRT620135 ZNF283 zinc finger protein 283 2 2
MIRT620164 EGFLAM EGF like, fibronectin type III and laminin G domains 2 2
MIRT620265 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT620630 RFT1 RFT1 homolog 2 2
MIRT621046 DGKD diacylglycerol kinase delta 2 2
MIRT621055 ZC2HC1A zinc finger C2HC-type containing 1A 2 2
MIRT621208 SULT1C4 sulfotransferase family 1C member 4 2 2
MIRT622022 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622113 SPRY3 sprouty RTK signaling antagonist 3 2 2
MIRT622299 SGK3 serum/glucocorticoid regulated kinase family member 3 2 2
MIRT622588 PRRG4 proline rich and Gla domain 4 2 2
MIRT622769 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT622848 PDGFA platelet derived growth factor subunit A 2 2
MIRT623012 ONECUT3 one cut homeobox 3 2 2
MIRT623095 NLGN4X neuroligin 4, X-linked 2 2
MIRT623416 KMT2A lysine methyltransferase 2A 2 2
MIRT623656 HRK harakiri, BCL2 interacting protein 2 2
MIRT623952 FBXL16 F-box and leucine rich repeat protein 16 2 2
MIRT624029 ELAVL3 ELAV like RNA binding protein 3 2 2
MIRT624250 CSNK2A1 casein kinase 2 alpha 1 2 4
MIRT624462 CADM2 cell adhesion molecule 2 2 2
MIRT624500 C8orf44-SGK3 C8orf44-SGK3 readthrough 2 2
MIRT624852 ABI2 abl interactor 2 2 2
MIRT625931 SCYL3 SCY1 like pseudokinase 3 2 2
MIRT625941 OLIG3 oligodendrocyte transcription factor 3 2 2
MIRT627038 HOXA13 homeobox A13 2 2
MIRT627277 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT627568 SLC5A12 solute carrier family 5 member 12 2 2
MIRT627834 PPAP2B phospholipid phosphatase 3 2 2
MIRT627850 PITPNM3 PITPNM family member 3 2 2
MIRT628147 HIP1 huntingtin interacting protein 1 2 2
MIRT628432 ANTXR2 anthrax toxin receptor 2 2 2
MIRT628937 AICDA activation induced cytidine deaminase 2 2
MIRT630764 MSANTD3 Myb/SANT DNA binding domain containing 3 2 2
MIRT630938 SIK2 salt inducible kinase 2 2 2
MIRT632061 NARS asparaginyl-tRNA synthetase 2 2
MIRT632114 FKBP9 FK506 binding protein 9 2 2
MIRT635064 MICA MHC class I polypeptide-related sequence A 2 2
MIRT635078 LIMS3 LIM zinc finger domain containing 3 2 2
MIRT635147 LIMS3L LIM zinc finger domain containing 4 2 2
MIRT635809 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT635985 EHD4 EH domain containing 4 2 2
MIRT636482 KIAA2018 upstream transcription factor family member 3 2 2
MIRT636823 FSIP2 fibrous sheath interacting protein 2 2 2
MIRT636846 ZSCAN2 zinc finger and SCAN domain containing 2 2 2
MIRT637012 TRABD2A TraB domain containing 2A 2 2
MIRT638051 YAE1D1 Yae1 domain containing 1 2 4
MIRT638410 PRDM10 PR/SET domain 10 2 4
MIRT639346 TBXA2R thromboxane A2 receptor 2 2
MIRT639527 CD86 CD86 molecule 2 2
MIRT639605 SLC25A32 solute carrier family 25 member 32 2 4
MIRT639626 ZSCAN23 zinc finger and SCAN domain containing 23 2 2
MIRT640046 MYOCD myocardin 2 2
MIRT640369 UQCRB ubiquinol-cytochrome c reductase binding protein 2 2
MIRT640419 COG6 component of oligomeric golgi complex 6 2 2
MIRT640858 TSHZ2 teashirt zinc finger homeobox 2 2 4
MIRT640891 RBM20 RNA binding motif protein 20 2 2
MIRT641226 SEMA3E semaphorin 3E 2 4
MIRT641753 SF3A1 splicing factor 3a subunit 1 2 2
MIRT642055 KCNK2 potassium two pore domain channel subfamily K member 2 2 2
MIRT642464 RSL1D1 ribosomal L1 domain containing 1 2 2
MIRT642688 ZNF878 zinc finger protein 878 2 2
MIRT643233 PRSS21 protease, serine 21 2 2
MIRT643250 ZNF566 zinc finger protein 566 2 2
MIRT643777 DCLK3 doublecortin like kinase 3 2 2
MIRT643962 FHL2 four and a half LIM domains 2 2 4
MIRT644069 PARG poly(ADP-ribose) glycohydrolase 2 2
MIRT644115 FAM166B family with sequence similarity 166 member B 2 2
MIRT644250 WEE2 WEE1 homolog 2 2 2
MIRT645281 ANGPTL7 angiopoietin like 7 2 2
MIRT645949 TTF2 transcription termination factor 2 2 2
MIRT646722 RHOG ras homolog family member G 2 2
MIRT646757 WDR3 WD repeat domain 3 2 2
MIRT646821 IL6R interleukin 6 receptor 2 2
MIRT647110 CRISP1 cysteine rich secretory protein 1 2 2
MIRT647162 TMLHE trimethyllysine hydroxylase, epsilon 2 2
MIRT647278 JAG2 jagged 2 2 2
MIRT647609 IGSF9B immunoglobulin superfamily member 9B 2 2
MIRT647890 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT648212 TM4SF20 transmembrane 4 L six family member 20 2 2
MIRT648564 CAPN13 calpain 13 2 2
MIRT649534 VAMP8 vesicle associated membrane protein 8 2 2
MIRT649801 GALC galactosylceramidase 2 2
MIRT650265 KLF2 Kruppel like factor 2 2 4
MIRT650313 TMX4 thioredoxin related transmembrane protein 4 2 2
MIRT650628 LTF lactotransferrin 2 2
MIRT651577 WDR26 WD repeat domain 26 2 2
MIRT651629 WASF3 WAS protein family member 3 2 2
MIRT651831 USP37 ubiquitin specific peptidase 37 2 2
MIRT652085 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT652377 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT652537 TLX1 T-cell leukemia homeobox 1 2 2
MIRT652986 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT653079 SSR3 signal sequence receptor subunit 3 2 2
MIRT653577 SLC35B3 solute carrier family 35 member B3 2 2
MIRT654141 RPAP2 RNA polymerase II associated protein 2 2 2
MIRT654264 RGS17 regulator of G protein signaling 17 2 2
MIRT654336 RBM27 RNA binding motif protein 27 2 2
MIRT654599 PTPRT protein tyrosine phosphatase, receptor type T 2 2
MIRT654748 PRKCB protein kinase C beta 2 2
MIRT655008 PLA2G16 phospholipase A2 group XVI 2 2
MIRT655556 P2RX7 purinergic receptor P2X 7 2 2
MIRT655651 NUPL2 nucleoporin like 2 2 2
MIRT655754 NPTX1 neuronal pentraxin 1 2 2
MIRT655785 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT656090 MTA3 metastasis associated 1 family member 3 2 2
MIRT656125 MSH6 mutS homolog 6 2 2
MIRT656812 KLHL28 kelch like family member 28 2 2
MIRT656818 KLHL14 kelch like family member 14 2 2
MIRT656985 KDM5A lysine demethylase 5A 2 2
MIRT657286 HOXB5 homeobox B5 2 2
MIRT657430 HHIP hedgehog interacting protein 2 2
MIRT657455 C21orf33 chromosome 21 open reading frame 33 2 2
MIRT657623 GPX8 glutathione peroxidase 8 (putative) 2 2
MIRT657660 GPR26 G protein-coupled receptor 26 2 2
MIRT657695 GPC5 glypican 5 2 2
MIRT657875 GFRA1 GDNF family receptor alpha 1 2 2
MIRT657934 GATM glycine amidinotransferase 2 2
MIRT657956 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658071 FOXR2 forkhead box R2 2 2
MIRT658091 FOXO1 forkhead box O1 2 2
MIRT659005 DHX33 DEAH-box helicase 33 2 2
MIRT659526 CHD9 chromodomain helicase DNA binding protein 9 2 2
MIRT659623 CDON cell adhesion associated, oncogene regulated 2 2
MIRT659897 CAMK2G calcium/calmodulin dependent protein kinase II gamma 2 2
MIRT659975 C2CD2L C2CD2 like 2 2
MIRT660035 C15orf61 chromosome 15 open reading frame 61 2 2
MIRT661559 EPHX2 epoxide hydrolase 2 2 2
MIRT661716 KLF8 Kruppel like factor 8 2 2
MIRT662464 SERPINF2 serpin family F member 2 2 2
MIRT664403 AQP3 aquaporin 3 (Gill blood group) 2 2
MIRT665753 TMEM43 transmembrane protein 43 2 2
MIRT666718 RBFOX1 RNA binding protein, fox-1 homolog 1 2 2
MIRT666749 RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 2 2
MIRT667496 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT667931 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT668182 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT668217 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT668417 FAM217B family with sequence similarity 217 member B 2 2
MIRT668672 DR1 down-regulator of transcription 1 2 2
MIRT669073 CELF1 CUGBP Elav-like family member 1 2 2
MIRT669119 CD84 CD84 molecule 2 2
MIRT679735 CABP4 calcium binding protein 4 2 2
MIRT683631 ZNF480 zinc finger protein 480 2 2
MIRT683820 ZNF682 zinc finger protein 682 2 2
MIRT686181 ZNF594 zinc finger protein 594 2 2
MIRT694368 MTA1 metastasis associated 1 2 2
MIRT695098 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT697033 GOLGA5 golgin A5 2 2
MIRT698516 TFRC transferrin receptor 2 2
MIRT706075 HNRNPU heterogeneous nuclear ribonucleoprotein U 2 2
MIRT707561 ARID3A AT-rich interaction domain 3A 2 2
MIRT708297 MPPE1 metallophosphoesterase 1 2 2
MIRT709806 AR androgen receptor 2 2
MIRT710004 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT710455 METTL15 methyltransferase like 15 2 2
MIRT710861 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT711133 CLEC7A C-type lectin domain containing 7A 2 2
MIRT711137 TMEM174 transmembrane protein 174 2 2
MIRT711164 EMCN endomucin 2 2
MIRT711195 SMIM14 small integral membrane protein 14 2 2
MIRT711403 RAB3C RAB3C, member RAS oncogene family 2 2
MIRT711739 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712251 PTPRN2 protein tyrosine phosphatase, receptor type N2 2 2
MIRT713079 ZG16 zymogen granule protein 16 2 2
MIRT714221 ARMC10 armadillo repeat containing 10 2 2
MIRT714249 TMEM78 transmembrane protein 78 2 2
MIRT714374 PPP1R8 protein phosphatase 1 regulatory subunit 8 2 2
MIRT714554 LMTK2 lemur tyrosine kinase 2 2 2
MIRT714955 MEOX2 mesenchyme homeobox 2 2 2
MIRT714962 N4BP2 NEDD4 binding protein 2 2 2
MIRT715157 FIG4 FIG4 phosphoinositide 5-phosphatase 2 2
MIRT715340 VMP1 vacuole membrane protein 1 2 2
MIRT716244 PALM2 paralemmin 2 2 2
MIRT716476 SAMD7 sterile alpha motif domain containing 7 2 2
MIRT716876 PHF16 jade family PHD finger 3 1 1
MIRT716981 GPR155 G protein-coupled receptor 155 2 2
MIRT717026 KRTAP4-9 keratin associated protein 4-9 2 2
MIRT717657 THBS2 thrombospondin 2 2 2
MIRT717834 NEGR1 neuronal growth regulator 1 2 2
MIRT718053 CYP3A5 cytochrome P450 family 3 subfamily A member 5 2 2
MIRT718312 TMPRSS11B transmembrane protease, serine 11B 2 2
MIRT718679 FZD2 frizzled class receptor 2 2 2
MIRT719109 MAML1 mastermind like transcriptional coactivator 1 2 2
MIRT719275 SETD7 SET domain containing lysine methyltransferase 7 2 2
MIRT719670 SPDYE1 speedy/RINGO cell cycle regulator family member E1 2 2
MIRT719689 STX6 syntaxin 6 2 2
MIRT719863 CYP4F11 cytochrome P450 family 4 subfamily F member 11 2 2
MIRT719887 RRP36 ribosomal RNA processing 36 2 2
MIRT720307 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
MIRT721135 SNRK SNF related kinase 2 2
MIRT721494 THRB thyroid hormone receptor beta 2 2
MIRT721585 LRRC2 leucine rich repeat containing 2 2 2
MIRT721855 CENPJ centromere protein J 2 2
MIRT721971 RAD50 RAD50 double strand break repair protein 2 2
MIRT722262 MAT1A methionine adenosyltransferase 1A 2 2
MIRT722323 PKHD1 PKHD1, fibrocystin/polyductin 2 2
MIRT722360 LGSN lengsin, lens protein with glutamine synthetase domain 2 2
MIRT722486 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT722768 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT722959 SLC25A26 solute carrier family 25 member 26 2 2
MIRT723266 TAL2 TAL bHLH transcription factor 2 2 2
MIRT723277 KRTAP21-2 keratin associated protein 21-2 2 2
MIRT723438 NDUFAF3 NADH:ubiquinone oxidoreductase complex assembly factor 3 2 2
MIRT723539 PAGR1 PAXIP1 associated glutamate rich protein 1 2 2
MIRT723629 KLC3 kinesin light chain 3 2 2
MIRT723801 BDKRB2 bradykinin receptor B2 2 2
MIRT723869 KLHL26 kelch like family member 26 2 2
MIRT723960 GPR146 G protein-coupled receptor 146 2 2
MIRT724476 CSNK1A1 casein kinase 1 alpha 1 2 2
MIRT724533 ABCG5 ATP binding cassette subfamily G member 5 2 2
MIRT725154 SEC62 SEC62 homolog, preprotein translocation factor 2 2
MIRT725362 MTF2 metal response element binding transcription factor 2 2 2

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