Gene Symbol |
AGO1
|
Synonyms |
EIF2C, EIF2C1, GERP95, Q99, hAgo1 |
Description |
argonaute 1, RISC catalytic component |
Transcript |
NM_012199
|
Expression |
|
Putative miRNA Targets on AGO1 |
|
3'UTR of AGO1 (miRNA target sites are highlighted) |
>AGO1|NM_012199|3'UTR
1 AGGCAGAACGCTGTTACCTCACTGGATAGAAGAAAGCTTTCCAAGCCCCAGGAGCTGTGCCACCCAAATCCAGAGGAAGC
81 AAGGAGGAGGGAGGTGGGGTAGGGAGGAGTGTAGGATGCCTTGTTTCCTTCTATAGAGGTGGTGTAAGAGTGGGGAACAG
161 GGCCAGCAAGACAGACCACCAGCCAGAAATCTCTGATATCAACCTCATGTCCCCCACCCCTCACCCCATCTTGTCACATC
241 TGGCCCTGACCCCACTGGACCAAAAGGGGCAGCACTGGTGCCCACCATACACACAGGTGTCTCATGTGACTCACAGTGCT
321 AAAGACTCATGCTTGACAGCTTGGTAAGGTCAACTCTGTAGCCCTGCAGACAAAAGCTGGTTAGGTTTGGGTTTGATACT
401 TTAGATGGGAAAGTGAGGGGCTTGAGAAAGTGGGTGGGAGGAGGGAAGGATTTTTTAGGAGCCTTAATCAGAAAAGGACT
481 AGATTTGTTTAAGAAGAAAAATGAAACCAGACCCAGATCAATATTTTAGGATACTAGATGTTTTAATGGGTTCAGAATCC
561 AGTTTGTAGGAAGATTTTTTAATGGTTTTGGTTGCTCCTCCCCCAGCTGCCACCCCCCACCTTACCCTTATTCCTCTCTG
641 TCCACATTTTCTGCCCCACCTTACTTCTCCTCCCTGACAGACATCCAGCCCCTAGTAATACTTAAGGCACTATGGCACTT
721 AGCTTTGAAGTGACACGACCCTGTCTTCCTTCCGCCCGCTGGTGGGTAACCAGTGCCTTCCCTGTAACGGTAATGCTGCA
801 GAACTGCAACCTTTTGTACCTTTCTTTGGGGAATGGGGTGGGGGTGGGAGAGGAGGTAGATGGGGAAGAAATACCCCAGA
881 CCCAACAAACCTCCAGCCAGAAAGCCAGCTATTTTGCATTTGAAGGAATTGACTTCCTCATTCATTGAGCTTTTTAAAAG
961 ATCACAACCTCAAGATGGTTAAAATCCATTGACATTTGCACTTTCAAACATGACAAGTCTCGGAGCTGCTGAGATGACAG
1041 GCCCCTGGCCTTTCCACTTATGCCTCCTTTTCTCCTTATTCCTCCTACCTCCCGCCCCGCCCAGGTCTGGAGTTACTTTC
1121 ATAGCATTTTTCACTCTTGGCTTCTTTTCTCCCTTGATGGTCAAGTCTCTTATGTTTCAATATTTCTTAACTGGGGTGTC
1201 TTATAACAAAAAACTCTTAGGTCTAAAATGAGAAAAAAGAGAGAAAACAAAATGTTATTTTTATACCATAACTTGAGTGT
1281 ATTGCCAAAATTTGGAAATCCTTCCCATGCCTGATGAGTTTATATCCCAGAAACATTGAGCCATCAGAATGAACTGTGTA
1361 CCTGATTTGTTCTCTGACCTGGCTAGGTAGGGAGGGGGTGGTTATCGCCCCAAGATGGGGTCCAGGCTCCATCCTTCCTC
1441 TGTGCAGATAATACCTTTTTCTTGCTATAGCCTCCCTCCTCTGCACTGTCCTGCACTCTTTCTTGCAAGTGCATCTTTTT
1521 CCTTCCCCTGGACTGTCCTCTGACCCTTTGGCTCATCCTAGATTGCAGTGTGTCCTGTGGACAGGCTGGGGAATTTTGCT
1601 GCTCCCTATTGCTTCTGTTTACAAAAATGAATTTTTCCTGGTTTCCCACTAGGGCATGTGGGTGGGTGGCATGGACTTTT
1681 TTTTTTTTTTTTTTTTGTCTTGAGACATGGGGTTTGGCTGTCTTGCAGGACTGGAGAAGGTGGTGGTTCTAGCTTGGTCT
1761 CTGTTGGCCTTGAAGCAAGCATCCCCCCTGCCCTTTTTCCTTGACTGTTCATTTTTTTCCTGCCCCACTGCTTGGGATGG
1841 GGAGTTGCAACTTCAGTGTGGAATTTCCTCTTTGAGGAGCCTGGGCTTGGATCTATCCTGATCTGGTGATGAAGCCATGA
1921 TTACTTTAGACCTAGCCCAGGCTTGGAGGCCAGCTGGAGGAAGAAGGGTCTAAATCCTGGCCTGTAGAGTTAGAACTACC
2001 ATTTCCTCCCCTTAGCTGCCCTTGTATGACCCGGATTTGCTATGCAAAACAATCTATCCCAGGTTCTGTTCTGGTTGGCT
2081 ACATTGTTCAGCAACTCACAAAACGTAGCACAAACATTCATTATGGAGAAAGCATCAGGACTGTTGAGTAACTCCTCCTT
2161 TACTTTTTTCCTGCTGGCTACAGCATGGGGTGCCCTATAGGCACAAGCCCAGCTGAAGAACAGAATGGAGGGCTCTGGGA
2241 GGAGGCAGCTCACTGGAGAGCCTACATTCCTTACACAAGTGCCTAAAGAGAGTGATGCTAACACTCCATCTGCCCTGTCC
2321 ATTGCCTTCATATACAGTCTACTTCGTGTTCTGTCACCCTTTGGGGAGGGGAGTTCTCCTGGGACAGTGGGCTCTGCATG
2401 TTCTCCACTTGGATACATTTTGGGGCTAGGATCAGGGCACTATTCCTGGAGGGTCCAGTCATTCACCAGCATTTGCAAAT
2481 GTCCATAGGGAGCAGGTGGCAGCCTCTACTCCCAGCAACAAGTTTGTGTTCTCTCCTTTTCTCTCTTTGCCTCACTCTCT
2561 CCAGTTGGTTTTCAGCTGGGGCTTGAAATGCATTTTTAGCCCTTTGACGTGGCTTATGCCATTCAAGAAATAAAAAGCAA
2641 GAGAATCAGCTTTGGGCAATGACAAGAAATGAGTTCTTACTCTGATTTTTTTGTAAAAAGATAATTTTTGAGACTTGAAA
2721 AATACCCCGACCTTGAGATTATTCCTGTTTGAAAGGTGGTGCATGCAGATGGAGAAGTGGTGTTGGCAGCAAGCTTTGGC
2801 TCATGTGGATTTGGTTTAAGTGGTGCTTCTTACCCAAGCTTCAAGGAAGTGCTTGGGGGACCCCCAGCCTCATCCTCTTA
2881 GTTGGGTCTCTTGTTCCCTTTGTACCACTGTTTTGCCTTCCTTTTCCTCTTCTCTCTTTGCCTGGCTTCCTTTCCCTTTT
2961 CTTCTATTCACTCTGCTTGCTTGCTGGCCGGCCTGCCTGCCTGCCTGCCTGCCTGCCTGCCTGTCTGCCTATGTGATGAT
3041 GAAATCTCTGCATGGCTGCAATGATCCCACTGTTAGCTGGCAGGGTCAGGCTTAGCTCCTTGACTGCAGAAGACCAAGAA
3121 CCTGTTCCCCAAGCCCAGAGATGTCCACCTGGGCTGGACTGCCCTCAAGCTTATACTAGAGAAGAGCAACTGACCTGCCC
3201 AACTTGTGTGAAGTCAGGAGGGTTTCTGGCATTTTCCACACCTGTCCACTCCTTGGAGCTGGTTTCTCTCATTGCTTTTT
3281 CTAAATCTGGTTCTTTTTCTCTTTACCTGGGGCCTGGCTTTTCTGAGATTGTCTTAGGGTTGAGCTATTTGGGTATCCTG
3361 GGTTTGAGTGTTAGGGGATGGACATAAAGGAAAAAGAGTGATGAGAAGAGAATGGAGAGAATTTGAATAAAAGGTGGGAA
3441 AGGAGAGCACTGTTCTTTGATTGTTTATCCAGTCCAACCTGATCCATTAGGGATCGAGGTGCTACACTGGCCTCCAGGGA
3521 TAAGCCTGGGGCTACTGTTGCTGGGAACTTAGGCTTAACATAAAGCCGAAGAAGGTACCTAGAAATTTGAAACTTCCCTA
3601 AAAAGCTCCTAATGCCCACCTGCTAGATAGCTTCTCTGTGGCCTCCTATTTAGCTAAGCAGCAGTGTTTTTGGATACTTT
3681 TTTTTTCTGTTTGTGAATAAGGCCAGCACTCAAGATGGGCAGCCAAGGGTGCACTGACTATTAGCTGGCCCATAGGATAT
3761 CTGTAAGGCTGGTGGGACAGTTTTGGACCTGGAATCATGTGTAACTAACAAGGTTGGACGTTTCTTCCCCATCAGGGTAG
3841 AAAAATCATCTCAAACTAGCCAAAAGGCAGTTTTGGAAACTACATTGGGGGACGTTATTTTTATTTATATATGGGGCCTA
3921 GGCCAATCCAGGATGGTAGCTGGAATACCTTCCTTCTTAAAATCTGATCATGGCAGGGATATGCAGGGCACTTTTTACTA
4001 TTTGGCCTTCTAAGCAGATTGGGAAGGAGGTATTTTCTGGTTTTCGCTTTCCTCCGACTTAATAGGACTTGCCTTCTCCC
4081 TGGGCAGGGAGAGAGGCTGGGTTGGTGCTCTCCCTTACTCTACTCATACTGACTTAGAGCCTCTGGCTGCTGTTTGGGCA
4161 TCCAAGAAAGGGAGGGGAAGGAATGAGCTAAAAACAAAACAGAATGAGGTGGGAAAGGGAGATTTTCTTCTTTACAGAGG
4241 AAAATAGGAAACCCTCCAAGAATTGTGCAAGTAAAGACATTTGTTGAATGCACTGAGTCCCTTGGTGTAGTAGCAATAAG
4321 GAAAAATGAAATTACTTTCCTGTGCACACAGTCCAGCCTAATTGGTATGTGATGTTGCACTTAGCAGCCATGTGGTGGGC
4401 ATGTGTGACTACTCTGGTTTTCACTTTAGTTTCTAAACTTTTTATCCCTCTCAAGTCCAGCATGGATGGGGAAATGTCTC
4481 TGGATCCCCACAGCTGTGTACTTGTTTGCATTTGTTTCCCTTTGAGATTTGTGTTTGTGTCCTGCTTTGAGCTGTACCTT
4561 GTCCAGTCCATTGTGAAATTATCCCAGCAGCTGTAATGTACAGTTCCTTCTGAAGCAAGCAACATCAGCAGCAGCAGCAG
4641 CAGCAGCACAATTCTGTGTTTTATAAAGACAACAGTGGCTTCTATTTCTAAAAAAAAAAAAAAAAAAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' ggCCAGGCAUGUUUGAGACGUc 5'
|| | || :::|||||||
Target 5' tgGGACAGT--GGGCTCTGCAt 3'
|
2380 - 2399
|
152.00 |
-14.90 |
2
|
miRNA 3' ggccaggcAUGUUUGAGACGUc 5'
|: || |||||||
Target 5' tgtgatgaTGAAATCTCTGCAt 3'
|
3032 - 3053
|
150.00 |
-9.10 |
3
|
miRNA 3' ggccAGGCAUGUUUGAGACGUc 5'
||| | | |||||||
Target 5' agccTCCCT-C---CTCTGCAc 3'
|
1469 - 1486
|
142.00 |
-10.00 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|