miRTarBase - #MIRT115808


—
pre-miRNA Information
pre-miRNA hsa-mir-6867   
Genomic Coordinates chr17: 40193597 - 40193663
Description Homo sapiens miR-6867 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6867-3p
Sequence 47| CUCUCCCUCUUUACCCACUAG |67
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSM7811173 21 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1403216522 1 dbSNP
rs781776276 3 dbSNP
rs202050374 4 dbSNP
rs367842831 5 dbSNP
rs1223489976 6 dbSNP
rs907256096 9 dbSNP
rs753257137 14 dbSNP
rs757843554 17 dbSNP
rs371369162 18 dbSNP
Putative Targets

Gene Information
Gene Symbol CAPN15   
Synonyms SOLH
Description calpain 15
Transcript NM_005632   
Expression
Putative miRNA Targets on CAPN15
3'UTR of CAPN15
(miRNA target sites are highlighted)		 
>CAPN15|NM_005632|3'UTR
   1 CCACCATGCCTGGGGCAGGGGCTGTGCACAGACGGACCCCCCACCCCCACACGCACTTTATGAGGGAGACCCCGACAGAG
  81 GACGCTTGAGCCAGAATCTCAGGACCCCGCCCAGGGAGCTGCCAGCCCAGGGCTCAGCTTCCCATGGGCCCCCCGCCCCC
 161 CTCCTTCCCCTCCCTGAACCCCACAGTCCGCCTGGCCAGGCCTCCTGGCCGCCACGCAGAATACCTCGAACCAGGCGGGC
 241 TGTGAACCAGCCCCGCTCACCTGCCAGCCCCAACACCCGACGGGGGCCGAGGCCAGGCTGCCCCTCCCTGTGGGCTCAGG
 321 GTCTCCTGCGGGCTAGGCAGCCAGGAGCTCTGTCCGCAAAACCAAATCTGGGTGTCAGAGGCCAAGACCCTGGGGTGGGA
 401 TCAGGGACCACCCCTCACGGGGCATAAGGTCAGTTTTCCCCCAGAGCCCGGGTCCCTGTCCCCCACAGGGCAGGCGGGGT
 481 CCCTGGAGCCCTGGTGTGGAGCGGCGAGTCCCGGGGCGGTGCCTGTCTCAGAAGAAGGGGCCCTTGGCCAGCCCCCCAGC
 561 GACACTATGCAAATCCTGGAGTGCCCGCCAGGATCGAAGCCATGACTGGGTGCAGGCGGGCGCCAGGCCCGCTGTGGGTG
 641 GGCACCAGTTCTCAGCACCGCTCACTGCTGCCGGGCACACTGGGACCAGCAGGCTCCTCAGCCAACCCTGTCCCTCGGCC
 721 CGGCCCTGCCAGAGAGGGACCCCAGCACATCGTGGGCACGGGCAGGGCTCAGCCGCTCCCACCTCCCCACAGAAGCCCAG
 801 GAGTGTGTGGACGTCTGAGCCCAGCTTTCTGCGTGCCCTCCTGGCCCCTCACTCCCGGCAGCGGGCCGGCCTCGCCCCCA
 881 CTCCCCCTCCTACCCCGGCAGGGGCTTCCGGGGCCTTTTCACCTGGAGAAACATTCCCACTCCCCTTTGGCCTCCCTGTA
 961 CTCTGAGCTGTGAATATTTTTAACCCTGTAAATACGGCCAGCTCTTGTGACACAGAGACTATTTTATCAATTGTCAGTCC
1041 CGTTCCTTTACCATAGGATTCTCCACAGTGGCTTCCGACTCAGGCTCCAATGGACCAAATAAAAGCGTTTTGTTTTGTAA
1121 AAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaucacccAUUUCUCCCUCUc 5'
                  | | |||||||| 
Target 5' cacgcactTTATGAGGGAGAc 3'
 50 - 70 149.00 -12.10
2 
miRNA  3' gaucacccauuucUCCCUCuc 5'
                       ||||||  
Target 5' caggaccccgcccAGGGAGct 3'
 100 - 120 120.00 -9.60
3 
miRNA  3' gaucacccaUUUCUCCCUcuc 5'
                   |:|||||||   
Target 5' ggccctgccAGAGAGGGAccc 3'
 722 - 742 116.00 -11.12
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN28847342 2 COSMIC
COSN30522697 17 COSMIC
COSN13680312 35 COSMIC
COSN25751050 44 COSMIC
COSN13680313 54 COSMIC
COSN30172617 101 COSMIC
COSN20078681 237 COSMIC
COSN20078466 283 COSMIC
COSN20157752 419 COSMIC
COSN14485186 552 COSMIC
COSN7263405 631 COSMIC
COSN18723413 718 COSMIC
COSN31607677 833 COSMIC
COSN26669524 910 COSMIC
COSN30543147 943 COSMIC
COSN30542686 944 COSMIC
COSN30172496 964 COSMIC
COSN26668975 1032 COSMIC
COSN24385290 1043 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1462650548 4 dbSNP
rs756171466 9 dbSNP
rs780128717 10 dbSNP
rs1247824213 11 dbSNP
rs1389187959 21 dbSNP
rs754309501 22 dbSNP
rs755612564 25 dbSNP
rs375077512 26 dbSNP
rs1291875102 27 dbSNP
rs748560105 34 dbSNP
rs370085862 35 dbSNP
rs1250973543 36 dbSNP
rs752786979 37 dbSNP
rs766236853 37 dbSNP
rs373297984 38 dbSNP
rs561192987 39 dbSNP
rs770351925 40 dbSNP
rs1427020258 41 dbSNP
rs776271287 43 dbSNP
rs1383739676 44 dbSNP
rs759032666 45 dbSNP
rs115215017 47 dbSNP
rs775377549 49 dbSNP
rs1188154302 50 dbSNP
rs762768865 53 dbSNP
rs1264764794 54 dbSNP
rs1269942421 71 dbSNP
rs115624718 72 dbSNP
rs1186473093 73 dbSNP
rs571447267 74 dbSNP
rs538872095 75 dbSNP
rs1352663974 80 dbSNP
rs1165900459 81 dbSNP
rs1378955267 82 dbSNP
rs1277275849 83 dbSNP
rs1227303804 84 dbSNP
rs1051757217 85 dbSNP
rs910643632 86 dbSNP
rs1159299110 93 dbSNP
rs1323258218 100 dbSNP
rs1401802934 109 dbSNP
rs943481124 110 dbSNP
rs371593856 114 dbSNP
rs1037703434 119 dbSNP
rs1472343976 132 dbSNP
rs899183299 133 dbSNP
rs1341297418 143 dbSNP
rs565686396 144 dbSNP
rs1216166075 147 dbSNP
rs1282146165 149 dbSNP
rs1449904347 149 dbSNP
rs375085852 155 dbSNP
rs1221335561 156 dbSNP
rs1352867348 156 dbSNP
rs1240836832 157 dbSNP
rs1048022936 161 dbSNP
rs1003718627 162 dbSNP
rs1342187095 163 dbSNP
rs1199394624 166 dbSNP
rs1035407350 171 dbSNP
rs1256375610 172 dbSNP
rs1443811882 182 dbSNP
rs958474437 183 dbSNP
rs536198295 190 dbSNP
rs538999660 191 dbSNP
rs1187322651 195 dbSNP
rs1476291516 203 dbSNP
rs1240121447 204 dbSNP
rs1021274147 205 dbSNP
rs773001066 206 dbSNP
rs1463220640 211 dbSNP
rs1439621532 212 dbSNP
rs968819939 216 dbSNP
rs865979282 217 dbSNP
rs554279489 219 dbSNP
rs369156969 227 dbSNP
rs746599849 228 dbSNP
rs924532467 229 dbSNP
rs1435053853 233 dbSNP
rs770585968 237 dbSNP
rs182123844 238 dbSNP
rs910413677 240 dbSNP
rs943446507 245 dbSNP
rs1038218554 253 dbSNP
rs920576042 254 dbSNP
rs929317632 255 dbSNP
rs150894987 256 dbSNP
rs1244957329 257 dbSNP
rs1329006675 261 dbSNP
rs1375961132 264 dbSNP
rs1232935795 268 dbSNP
rs906793638 269 dbSNP
rs1447263157 276 dbSNP
rs373318833 279 dbSNP
rs376775446 280 dbSNP
rs1228201825 282 dbSNP
rs868168911 283 dbSNP
rs1317819691 286 dbSNP
rs895328054 287 dbSNP
rs1346651548 289 dbSNP
rs369514128 290 dbSNP
rs1368883804 293 dbSNP
rs1021806934 296 dbSNP
rs1425142014 301 dbSNP
rs1386827023 302 dbSNP
rs1162656111 309 dbSNP
rs1423126830 315 dbSNP
rs904148907 326 dbSNP
rs1178366527 330 dbSNP
rs998483725 331 dbSNP
rs1031333083 334 dbSNP
rs954623164 337 dbSNP
rs1198220748 339 dbSNP
rs1294336314 340 dbSNP
rs1017423010 347 dbSNP
rs1321571896 348 dbSNP
rs1378320871 351 dbSNP
rs1348707091 354 dbSNP
rs373663897 356 dbSNP
rs556472699 357 dbSNP
rs920681090 358 dbSNP
rs929260008 363 dbSNP
rs983446222 364 dbSNP
rs11539618 369 dbSNP
rs939565510 375 dbSNP
rs1055815377 378 dbSNP
rs895289026 389 dbSNP
rs879395604 394 dbSNP
rs1042777565 396 dbSNP
rs1269918103 398 dbSNP
rs371405763 404 dbSNP
rs1488350828 410 dbSNP
rs1261895974 411 dbSNP
rs1388462997 412 dbSNP
rs1211094212 415 dbSNP
rs775423217 419 dbSNP
rs1287752976 420 dbSNP
rs545242676 430 dbSNP
rs1447200836 436 dbSNP
rs1031277493 440 dbSNP
rs1386066259 446 dbSNP
rs1301361655 450 dbSNP
rs890146852 450 dbSNP
rs553800278 451 dbSNP
rs116919151 454 dbSNP
rs542971308 455 dbSNP
rs1387314621 456 dbSNP
rs1216265093 459 dbSNP
rs1277099995 460 dbSNP
rs561145019 462 dbSNP
rs1199607300 464 dbSNP
rs1197721898 465 dbSNP
rs1433010701 473 dbSNP
rs1191080719 476 dbSNP
rs562644577 476 dbSNP
rs973654682 477 dbSNP
rs1027524812 483 dbSNP
rs1204325025 492 dbSNP
rs139421036 495 dbSNP
rs1209835694 496 dbSNP
rs983559166 498 dbSNP
rs927938338 499 dbSNP
rs543726554 503 dbSNP
rs565223049 504 dbSNP
rs116442579 506 dbSNP
rs1044282012 507 dbSNP
rs1399395426 511 dbSNP
rs547617233 513 dbSNP
rs924135226 514 dbSNP
rs934396060 518 dbSNP
rs565728236 519 dbSNP
rs1248018195 524 dbSNP
rs1184751720 530 dbSNP
rs1444244180 537 dbSNP
rs767627522 544 dbSNP
rs1008983881 546 dbSNP
rs1293977289 554 dbSNP
rs796350987 561 dbSNP
rs1397541293 562 dbSNP
rs900412115 565 dbSNP
rs994805963 568 dbSNP
rs1216001893 578 dbSNP
rs529769000 581 dbSNP
rs1332888206 584 dbSNP
rs1027882632 587 dbSNP
rs548142077 588 dbSNP
rs1305787130 593 dbSNP
rs1004943555 597 dbSNP
rs1035122947 603 dbSNP
rs375928519 607 dbSNP
rs1366799382 613 dbSNP
rs960662010 614 dbSNP
rs991218994 615 dbSNP
rs185934244 618 dbSNP
rs536687907 619 dbSNP
rs968686013 622 dbSNP
rs56163833 623 dbSNP
rs571610115 625 dbSNP
rs538805775 631 dbSNP
rs924081140 632 dbSNP
rs1239213554 637 dbSNP
rs935518414 638 dbSNP
rs1286118813 639 dbSNP
rs1408784683 652 dbSNP
rs1370363958 659 dbSNP
rs1052763072 661 dbSNP
rs1422954540 662 dbSNP
rs1389279637 664 dbSNP
rs554085300 669 dbSNP
rs1163182351 671 dbSNP
rs1165253678 672 dbSNP
rs911651996 673 dbSNP
rs572473704 674 dbSNP
rs1180321384 675 dbSNP
rs1472365271 677 dbSNP
rs1417836564 678 dbSNP
rs1157494796 679 dbSNP
rs1449644890 680 dbSNP
rs1360682687 688 dbSNP
rs1205619029 689 dbSNP
rs542730714 690 dbSNP
rs1285859386 693 dbSNP
rs1227401230 700 dbSNP
rs1345681500 716 dbSNP
rs1300655327 717 dbSNP
rs1378031939 718 dbSNP
rs1329679975 721 dbSNP
rs1323536853 722 dbSNP
rs1395758798 723 dbSNP
rs1390966174 731 dbSNP
rs1156952118 737 dbSNP
rs1456929342 740 dbSNP
rs1039110234 741 dbSNP
rs900189103 746 dbSNP
rs1476944208 752 dbSNP
rs555082788 753 dbSNP
rs1466143901 757 dbSNP
rs1049022762 760 dbSNP
rs576352032 761 dbSNP
rs1004722793 763 dbSNP
rs1317536676 764 dbSNP
rs1034883465 767 dbSNP
rs11539619 768 dbSNP
rs1012354305 773 dbSNP
rs372323100 775 dbSNP
rs549739470 776 dbSNP
rs924197305 779 dbSNP
rs780342821 781 dbSNP
rs956837512 783 dbSNP
rs567936697 784 dbSNP
rs1178571952 786 dbSNP
rs1412939871 787 dbSNP
rs912770595 789 dbSNP
rs944436087 790 dbSNP
rs1187815023 794 dbSNP
rs921569307 795 dbSNP
rs930346215 798 dbSNP
rs1048970792 799 dbSNP
rs35673689 801 dbSNP
rs541194411 804 dbSNP
rs886346582 805 dbSNP
rs940625353 807 dbSNP
rs1056289767 812 dbSNP
rs1401899277 813 dbSNP
rs896346697 814 dbSNP
rs1380014909 820 dbSNP
rs1358195767 822 dbSNP
rs1446105343 827 dbSNP
rs1466270072 829 dbSNP
rs1012717843 830 dbSNP
rs559306885 834 dbSNP
rs903812081 841 dbSNP
rs1167907109 843 dbSNP
rs1424283795 846 dbSNP
rs1309090030 848 dbSNP
rs1179551199 852 dbSNP
rs1482636889 854 dbSNP
rs1374730327 855 dbSNP
rs1000828690 857 dbSNP
rs1030995986 858 dbSNP
rs529932606 860 dbSNP
rs1205075707 861 dbSNP
rs987036978 863 dbSNP
rs1019727534 864 dbSNP
rs780416723 868 dbSNP
rs974876861 869 dbSNP
rs1197784851 870 dbSNP
rs768798658 874 dbSNP
rs779236502 875 dbSNP
rs547967079 876 dbSNP
rs1188918992 878 dbSNP
rs1351606891 879 dbSNP
rs369875335 881 dbSNP
rs1162596498 882 dbSNP
rs1433397812 883 dbSNP
rs1422773554 885 dbSNP
rs569779560 886 dbSNP
rs1397683481 887 dbSNP
rs1464359182 888 dbSNP
rs1250077080 895 dbSNP
rs1331129015 897 dbSNP
rs530377756 898 dbSNP
rs940572998 902 dbSNP
rs1056406421 910 dbSNP
rs755404759 911 dbSNP
rs15312 929 dbSNP
rs1268808995 934 dbSNP
rs896285075 937 dbSNP
rs375985418 944 dbSNP
rs142713286 945 dbSNP
rs1369428269 949 dbSNP
rs35424156 954 dbSNP
rs1045520974 955 dbSNP
rs1388777909 957 dbSNP
rs868502860 959 dbSNP
rs1455171888 964 dbSNP
rs1367070384 965 dbSNP
rs1199090038 972 dbSNP
rs1434166710 973 dbSNP
rs1269851096 976 dbSNP
rs903929903 980 dbSNP
rs1224219928 982 dbSNP
rs879876467 985 dbSNP
rs1316319947 986 dbSNP
rs1460017618 994 dbSNP
rs1169182732 996 dbSNP
rs746689558 997 dbSNP
rs1434590495 998 dbSNP
rs1210734117 999 dbSNP
rs1030943019 1002 dbSNP
rs773324793 1003 dbSNP
rs1234211506 1005 dbSNP
rs1415796186 1005 dbSNP
rs892496751 1009 dbSNP
rs1295122574 1010 dbSNP
rs1324946504 1015 dbSNP
rs760888267 1016 dbSNP
rs1270799646 1018 dbSNP
rs766509561 1022 dbSNP
rs754010610 1027 dbSNP
rs1383131902 1029 dbSNP
rs1278125324 1030 dbSNP
rs770675872 1031 dbSNP
rs1200886899 1032 dbSNP
rs1260566612 1033 dbSNP
rs1426416164 1034 dbSNP
rs538966571 1036 dbSNP
rs756174071 1039 dbSNP
rs7763 1039 dbSNP
rs1194905953 1040 dbSNP
rs975617081 1042 dbSNP
rs1453272488 1043 dbSNP
rs1172253227 1045 dbSNP
rs1377868348 1046 dbSNP
rs1435692722 1051 dbSNP
rs571772482 1052 dbSNP
rs1383289780 1054 dbSNP
rs1384100343 1055 dbSNP
rs1463643320 1056 dbSNP
rs1261056733 1058 dbSNP
rs1333976311 1059 dbSNP
rs1319236633 1062 dbSNP
rs1201248084 1064 dbSNP
rs1378078927 1065 dbSNP
rs1370268188 1066 dbSNP
rs1232261236 1073 dbSNP
rs1301149154 1077 dbSNP
rs753202452 1078 dbSNP
rs771068501 1080 dbSNP
rs1348166699 1085 dbSNP
rs1233672780 1088 dbSNP
rs1259876198 1091 dbSNP
rs1226011110 1094 dbSNP
rs538757790 1102 dbSNP
rs951755986 1107 dbSNP
rs984565752 1108 dbSNP
rs1305085638 1117 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions C8166
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM1462572. RNA binding protein: AGO2. Condition:C8166 NL4-3 ...

- Whisnant AW; Bogerd HP; Flores O; Ho P; et al., 2013, mBio.

Article - Whisnant AW; Bogerd HP; Flores O; Ho P; et al.
- mBio, 2013
UNLABELLED: The question of how HIV-1 interfaces with cellular microRNA (miRNA) biogenesis and effector mechanisms has been highly controversial. Here, we first used deep sequencing of small RNAs present in two different infected cell lines (TZM-bl and C8166) and two types of primary human cells (CD4(+) peripheral blood mononuclear cells [PBMCs] and macrophages) to unequivocally demonstrate that HIV-1 does not encode any viral miRNAs. Perhaps surprisingly, we also observed that infection of T cells by HIV-1 has only a modest effect on the expression of cellular miRNAs at early times after infection. Comprehensive analysis of miRNA binding to the HIV-1 genome using the photoactivatable ribonucleoside-induced cross-linking and immunoprecipitation (PAR-CLIP) technique revealed several binding sites for cellular miRNAs, a subset of which were shown to be capable of mediating miRNA-mediated repression of gene expression. However, the main finding from this analysis is that HIV-1 transcripts are largely refractory to miRNA binding, most probably due to extensive viral RNA secondary structure. Together, these data demonstrate that HIV-1 neither encodes viral miRNAs nor strongly influences cellular miRNA expression, at least early after infection, and imply that HIV-1 transcripts have evolved to avoid inhibition by preexisting cellular miRNAs by adopting extensive RNA secondary structures that occlude most potential miRNA binding sites. IMPORTANCE: MicroRNAs (miRNAs) are a ubiquitous class of small regulatory RNAs that serve as posttranscriptional regulators of gene expression. Previous work has suggested that HIV-1 might subvert the function of the cellular miRNA machinery by expressing viral miRNAs or by dramatically altering the level of cellular miRNA expression. Using very sensitive approaches, we now demonstrate that neither of these ideas is in fact correct. Moreover, HIV-1 transcripts appear to largely avoid regulation by cellular miRNAs by adopting an extensive RNA secondary structure that occludes the ability of cellular miRNAs to interact with viral mRNAs. Together, these data suggest that HIV-1, rather than seeking to control miRNA function in infected cells, has instead evolved a mechanism to become largely invisible to cellular miRNA effector mechanisms.
LinkOut: [PMID: 23592263]
CLIP-seq Support 1 for dataset GSM1462572
Method / RBP PAR-CLIP / AGO2
Cell line / Condition C8166 / C8166 NL4-3
Location of target site ENST00000219611.2 | 3UTR | CCCCACACGCACUUUAUGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23592263 / GSE59944
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
203 hsa-miR-6867-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT078229 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT107799 SLC1A1 solute carrier family 1 member 1 2 2
MIRT115808 CAPN15 calpain 15 2 2
MIRT137570 RCOR1 REST corepressor 1 2 2
MIRT161372 MBNL1 muscleblind like splicing regulator 1 2 2
MIRT320477 HOXA10 homeobox A10 2 2
MIRT444449 PTPRG protein tyrosine phosphatase, receptor type G 2 2
MIRT461305 MRPS27 mitochondrial ribosomal protein S27 2 6
MIRT470306 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT471679 PABPN1 poly(A) binding protein nuclear 1 2 2
MIRT475546 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT480901 BCL2L2-PABPN1 BCL2L2-PABPN1 readthrough 2 2
MIRT489368 RAB11B RAB11B, member RAS oncogene family 2 2
MIRT489557 PLD6 phospholipase D family member 6 2 2
MIRT494969 TMEM233 transmembrane protein 233 2 2
MIRT496634 SLC46A1 solute carrier family 46 member 1 2 2
MIRT500259 ZNF788 zinc finger family member 788 2 6
MIRT500272 ZNF781 zinc finger protein 781 2 8
MIRT500328 ZNF487P zinc finger protein 487 1 3
MIRT504012 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT504830 EREG epiregulin 2 2
MIRT513588 DCTN6 dynactin subunit 6 2 2
MIRT520896 STMN1 stathmin 1 2 2
MIRT525275 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT526166 ANKRD65 ankyrin repeat domain 65 2 2
MIRT526582 CCDC43 coiled-coil domain containing 43 2 2
MIRT527812 TMEM74B transmembrane protein 74B 2 2
MIRT528141 LRRC38 leucine rich repeat containing 38 2 2
MIRT529903 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531980 SLCO1B3 solute carrier organic anion transporter family member 1B3 2 2
MIRT532251 TBPL2 TATA-box binding protein like 2 2 2
MIRT534300 SKIDA1 SKI/DACH domain containing 1 2 2
MIRT534879 QKI QKI, KH domain containing RNA binding 2 2
MIRT538305 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT539385 ADRB1 adrenoceptor beta 1 2 2
MIRT541304 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT543960 RNF20 ring finger protein 20 2 2
MIRT544380 ZNF266 zinc finger protein 266 2 2
MIRT544451 KRBOX4 KRAB box domain containing 4 2 2
MIRT545783 ZNF791 zinc finger protein 791 2 4
MIRT548156 FRAT2 FRAT2, WNT signaling pathway regulator 2 2
MIRT556660 KMT2D lysine methyltransferase 2D 2 4
MIRT557715 GABARAPL1 GABA type A receptor associated protein like 1 2 2
MIRT562701 ZNF415 zinc finger protein 415 2 2
MIRT563050 ZNF138 zinc finger protein 138 2 2
MIRT564307 CCNT1 cyclin T1 2 2
MIRT568333 BACH1 BTB domain and CNC homolog 1 2 2
MIRT570864 ZNF525 zinc finger protein 525 2 2
MIRT570874 ZFP1 ZFP1 zinc finger protein 2 2
MIRT571516 ZNF625 zinc finger protein 625 2 2
MIRT572470 MTMR10 myotubularin related protein 10 2 2
MIRT572898 RUNDC3B RUN domain containing 3B 2 2
MIRT573084 APLN apelin 2 2
MIRT575251 Timp3 tissue inhibitor of metalloproteinase 3 2 2
MIRT575275 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 2 2
MIRT607230 LINS lines homolog 1 2 4
MIRT611803 FCRL4 Fc receptor like 4 2 2
MIRT612669 POU2F1 POU class 2 homeobox 1 2 4
MIRT612739 MYOCD myocardin 2 2
MIRT613409 CDH8 cadherin 8 2 4
MIRT614007 PAOX polyamine oxidase 2 2
MIRT615188 CLUAP1 clusterin associated protein 1 2 2
MIRT616497 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT616524 URM1 ubiquitin related modifier 1 2 2
MIRT617066 SPIB Spi-B transcription factor 2 2
MIRT617813 EMX2 empty spiracles homeobox 2 2 2
MIRT619291 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619375 KLHL12 kelch like family member 12 2 2
MIRT619499 TXLNB taxilin beta 2 2
MIRT619601 MKKS McKusick-Kaufman syndrome 2 2
MIRT619754 MYO1F myosin IF 2 2
MIRT619976 ZSCAN22 zinc finger and SCAN domain containing 22 2 2
MIRT620743 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT620871 KCTD7 potassium channel tetramerization domain containing 7 2 2
MIRT621380 CLNK cytokine dependent hematopoietic cell linker 2 2
MIRT621511 ZNF638 zinc finger protein 638 2 2
MIRT621537 ZNF500 zinc finger protein 500 2 2
MIRT621772 TMEM87B transmembrane protein 87B 2 2
MIRT622193 SLC5A12 solute carrier family 5 member 12 2 2
MIRT622319 SEC63 SEC63 homolog, protein translocation regulator 2 2
MIRT622738 PITPNM3 PITPNM family member 3 2 2
MIRT622996 ONECUT3 one cut homeobox 3 2 2
MIRT625301 SHISA6 shisa family member 6 2 2
MIRT625637 KCNQ3 potassium voltage-gated channel subfamily Q member 3 2 2
MIRT627698 RFFL ring finger and FYVE like domain containing E3 ubiquitin protein ligase 2 2
MIRT627751 RAD51L3-RFFL RAD51L3-RFFL readthrough 2 2
MIRT628438 ANTXR2 anthrax toxin receptor 2 2 2
MIRT635440 SLC25A44 solute carrier family 25 member 44 2 2
MIRT637166 TMEM50A transmembrane protein 50A 2 2
MIRT638207 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT639288 TFAP2A transcription factor AP-2 alpha 2 4
MIRT639398 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT641230 SEMA3E semaphorin 3E 2 2
MIRT641501 STC2 stanniocalcin 2 2 2
MIRT642577 PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 2 2
MIRT642735 TDRD6 tudor domain containing 6 2 2
MIRT644001 PPP1R3G protein phosphatase 1 regulatory subunit 3G 2 2
MIRT644210 CBS cystathionine-beta-synthase 2 2
MIRT645405 FAM110A family with sequence similarity 110 member A 2 2
MIRT645685 TBC1D13 TBC1 domain family member 13 2 2
MIRT645699 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT645761 SURF6 surfeit 6 2 2
MIRT645826 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT645914 PLXNA3 plexin A3 2 2
MIRT646167 PTPN14 protein tyrosine phosphatase, non-receptor type 14 2 2
MIRT646634 COA4 cytochrome c oxidase assembly factor 4 homolog 2 2
MIRT647547 CYP2B6 cytochrome P450 family 2 subfamily B member 6 2 2
MIRT648262 ZNF582 zinc finger protein 582 2 2
MIRT648385 ZNF22 zinc finger protein 22 2 2
MIRT648629 LEMD2 LEM domain containing 2 2 2
MIRT649353 SLC27A2 solute carrier family 27 member 2 2 2
MIRT649395 SH2D4A SH2 domain containing 4A 2 2
MIRT650241 CD68 CD68 molecule 2 2
MIRT650379 PTGIS prostaglandin I2 synthase 2 2
MIRT650705 KRT32 keratin 32 2 2
MIRT650854 UNC13D unc-13 homolog D 2 2
MIRT651042 ZNF644 zinc finger protein 644 2 2
MIRT651102 ZNF48 zinc finger protein 48 2 2
MIRT651130 ZNF398 zinc finger protein 398 2 2
MIRT652089 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT652200 TRIM33 tripartite motif containing 33 2 2
MIRT652422 TMEM239 transmembrane protein 239 2 2
MIRT652755 TET3 tet methylcytosine dioxygenase 3 2 2
MIRT653201 SP9 Sp9 transcription factor 2 2
MIRT653338 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653715 SLC25A32 solute carrier family 25 member 32 2 2
MIRT654456 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT654499 RABIF RAB interacting factor 2 2
MIRT654678 PSMB5 proteasome subunit beta 5 2 2
MIRT655162 PHF20L1 PHD finger protein 20 like 1 2 2
MIRT655540 PADI2 peptidyl arginine deiminase 2 2 4
MIRT655850 NFE2L1 nuclear factor, erythroid 2 like 1 2 2
MIRT656248 MEX3A mex-3 RNA binding family member A 2 2
MIRT656581 LSAMP limbic system-associated membrane protein 2 2
MIRT657597 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT657824 GJD3 gap junction protein delta 3 2 2
MIRT658466 FAM102B family with sequence similarity 102 member B 2 2
MIRT659083 DENR density regulated re-initiation and release factor 2 2
MIRT659196 CYBB cytochrome b-245 beta chain 2 2
MIRT659558 CGGBP1 CGG triplet repeat binding protein 1 2 2
MIRT659860 CAPRIN1 cell cycle associated protein 1 2 2
MIRT660172 BNC2 basonuclin 2 2 2
MIRT660626 ANKRD52 ankyrin repeat domain 52 2 2
MIRT660917 ADAM19 ADAM metallopeptidase domain 19 2 2
MIRT660979 ABHD2 abhydrolase domain containing 2 2 2
MIRT661564 EPHX2 epoxide hydrolase 2 2 2
MIRT662214 CCRL2 C-C motif chemokine receptor like 2 2 2
MIRT662246 C15orf52 chromosome 15 open reading frame 52 2 2
MIRT662560 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT662591 MAGEB4 MAGE family member B4 2 2
MIRT663294 TECPR2 tectonin beta-propeller repeat containing 2 2 2
MIRT663437 FBXO2 F-box protein 2 2 2
MIRT663811 RNF128 ring finger protein 128, E3 ubiquitin protein ligase 2 2
MIRT663821 NLRP12 NLR family pyrin domain containing 12 2 2
MIRT665959 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT666115 SRRM4 serine/arginine repetitive matrix 4 2 2
MIRT667448 MAPK14 mitogen-activated protein kinase 14 2 2
MIRT669330 BSND barttin CLCNK type accessory beta subunit 2 2
MIRT669409 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT669641 ACSBG1 acyl-CoA synthetase bubblegum family member 1 2 2
MIRT672663 GTF2H5 general transcription factor IIH subunit 5 2 2
MIRT673266 RUNDC1 RUN domain containing 1 2 2
MIRT676995 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT679290 SSBP2 single stranded DNA binding protein 2 2 2
MIRT687508 NCKAP1 NCK associated protein 1 2 2
MIRT698932 SPATA2 spermatogenesis associated 2 2 2
MIRT700852 PERP PERP, TP53 apoptosis effector 2 2
MIRT702426 KIAA1958 KIAA1958 2 2
MIRT703939 EPB41L1 erythrocyte membrane protein band 4.1 like 1 2 2
MIRT708962 SLC12A3 solute carrier family 12 member 3 2 2
MIRT709742 UBD ubiquitin D 2 2
MIRT709946 TRUB2 TruB pseudouridine synthase family member 2 2 2
MIRT711121 CYYR1 cysteine and tyrosine rich 1 2 2
MIRT711217 RETSAT retinol saturase 2 2
MIRT711576 ASPA aspartoacylase 2 2
MIRT711599 LHX5 LIM homeobox 5 2 2
MIRT712232 RCC2 regulator of chromosome condensation 2 2 2
MIRT713317 TMEM44 transmembrane protein 44 2 2
MIRT713510 PAFAH2 platelet activating factor acetylhydrolase 2 2 2
MIRT713543 GJB1 gap junction protein beta 1 2 2
MIRT713621 MED8 mediator complex subunit 8 2 2
MIRT714988 TSPAN11 tetraspanin 11 2 2
MIRT715449 PTCD1 pentatricopeptide repeat domain 1 2 2
MIRT715575 ATP5J2-PTCD1 ATP5J2-PTCD1 readthrough 2 2
MIRT715771 DDX42 DEAD-box helicase 42 2 2
MIRT715887 GNG2 G protein subunit gamma 2 2 2
MIRT716091 HARS histidyl-tRNA synthetase 2 2
MIRT717403 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT717965 PXMP4 peroxisomal membrane protein 4 2 2
MIRT718324 METTL7A methyltransferase like 7A 2 2
MIRT718628 DIP2A disco interacting protein 2 homolog A 2 2
MIRT719213 CAMK4 calcium/calmodulin dependent protein kinase IV 2 2
MIRT719234 CYSLTR2 cysteinyl leukotriene receptor 2 2 2
MIRT719817 LRRC4 leucine rich repeat containing 4 2 2
MIRT719978 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT720480 TMEM178B transmembrane protein 178B 2 2
MIRT720713 RAPGEF6 Rap guanine nucleotide exchange factor 6 2 2
MIRT721006 ZNF619 zinc finger protein 619 2 2
MIRT721741 SDK2 sidekick cell adhesion molecule 2 2 2
MIRT723547 ZDHHC22 zinc finger DHHC-type containing 22 2 2
MIRT723596 FKRP fukutin related protein 2 2
MIRT723746 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT724784 C1D C1D nuclear receptor corepressor 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6867-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

Error report submission