miRTarBase - #MIRT118973


—
pre-miRNA Information
pre-miRNA hsa-mir-6515   
Genomic Coordinates chr19: 12940484 - 12940540
Description Homo sapiens miR-6515 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6515-3p
Sequence 38| UCUCUUCAUCUACCCCCCAG |57
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs75453089 2 dbSNP
rs373354313 3 dbSNP
rs747907310 7 dbSNP
rs769602728 8 dbSNP
rs940767179 9 dbSNP
rs772968331 10 dbSNP
rs762602753 11 dbSNP
rs764010401 12 dbSNP
rs773666399 12 dbSNP
rs761256965 13 dbSNP
rs1320543469 15 dbSNP
rs764459512 16 dbSNP
rs754231139 17 dbSNP
rs878975696 18 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SOWAHC   
Synonyms ANKRD57, C2orf26
Description sosondowah ankyrin repeat domain family member C
Transcript NM_023016   
Expression
Putative miRNA Targets on SOWAHC
3'UTR of SOWAHC
(miRNA target sites are highlighted)		 
>SOWAHC|NM_023016|3'UTR
   1 AAATTGCTTCTTTTAGAAAATGCAAAGGTTTATTTGTCTTAATAAATTGAATACTAGGTGTTGTAAGGAAGTGAGACCAG
  81 AAGGACAAGCTAAATTATGCATTCTTACTTGAGGGATCGGAATGGATGGGGCGGAGTTCTCTTCAGGCTAGCCTTCTGGG
 161 AAAAGTGGATGTCTTTTTCAGAGATTCATCATACCTTGACCTGTACCTCTTCTCTGCCCTCCACTTCCCTGCCCTGGAGT
 241 CCGTTTCTGGAGACTAGAAATGTATCTAAATTGGGGGAACAGAATGAATGAATTAATGAATGAGAGTTCCTTTGCTTTAA
 321 CCATTCCTGGATGCCTGCAAAGTAAGGAATAATGCAGTTTTTATGTATCTGATTTTATAAGGGGTTACTCTTTCAAGAGT
 401 AACAAAAAAATGCAAACTGTAATGAAACTACATTGTATTTCTAAGTGTGAAAACGACAGGCTGCCCCGTTTTTACTAATT
 481 GCATTTGCATTTTAAGGTACTACTGAAGGTCAGATCAAAGTTGAAATGCAAAAATACTAATTAGAGAATAATGTGAATAA
 561 AATGGGAATCTTCTTGGTATTTTATGTGTATTGTAAGTAGCAGTTAAATTATTTTTTTAAAAGCAATTTCAGTTTTAATC
 641 ACTGAACAAAAGAAACAGGCAACATTCACTTCTGTAGTATGGTTTCCACCTATCTCTAACACCACTATTAAGGTACACCA
 721 GTGTTAAGGTACATTAATAACTACACAAAATTTTATTTAAAGAGAACACTTAGCAGCCTATGATAGTTTTCAATAAAATG
 801 TTGCCTCTCTTTCGGATTCTCACTAACTTTTGTTACTATTCTAAAAGTTTGAATTTGCTGGGGTGTTTATTCTGAGGATT
 881 ATTTAACCATTGTTCTATTTGGCATAACCCTATTTAATGGTGCTTAGAGCTGAATTACCTACAGAAACTGTTTCTGGTTT
 961 AAATAATTAGCACAAATTGGCCTAAGTATTCATGAGCCCATGTTTCTGTGAAGTAATTATTAAACCAACTTAATGATTCT
1041 TATGTAAGGTACACTTTTTATTTTAATACATTGGTAGTCTCTATGACTTGTAGCAATGTTTTACAAATGTTTAAAATGCT
1121 AAACTTAATTTTCCAAGCTTTTCTTGACAATTAGATACCTATCCTGTAGTTACTGAAAATCTGGGTAGTAAATCTACCCA
1201 ATTAAAATGGCACTTTATAAAAGGGAATAGAGAAGAGATGGGACTATTTCTATATTTAAATGCTGCTGGCTATTCCTTTG
1281 TATATAAATGAAAAATACCATTCATTAAAATTAAGTACTCGTTTAAGTATGGTTCTTAATTACATTTCATTCATTTATAT
1361 TAGAGTAAATGGCTTCATAACTACTTTAAAATTTAACCCACAAGCATATTAAATCTGTTTGTTATAAGATTGGAAACAAT
1441 TTTTGAGAGGGACTAATTTAAACAAGTCCTCCTTTAGTCTTTTGGGTCGCGTAGTTGCTGAAACCTAAGTACCTGCAGCC
1521 TACAGGATAAGGAAGTTCACAGCCTGCGGGGTGAATGAACCCATGTGTGAACTGCACAGAGCAATTCATAGAAAATGCAT
1601 AGAAATTTGTAACACTTTGGTCACATCTGTCTCTAGATGGTCATTGAATTTGTTTAAAGATGGATGAAAGGCCAGGCATG
1681 GTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACTTGAGGCCAGGAGTTTGAAACCAGCCT
1761 GGCCAACATGGTGAAAACCTGTCTCTACTAAAAATACAAAAATTAGCCGAGCGTGGTGGTGCGTGCCTGTAGTCCCAGCT
1841 ACTTAGGAGGCTGAGGCATGAGAATCACTTAAACCTGAGAGGTGGAGGTTGCAGTTGAGCCAAGATCACGACACTGCACT
1921 CCAGCCTGGGCAACGGAGACTCTGTCTCAAAAAAAAAAAAAAAAAAGATGAATGAAAATATGAAATATATAAACTAGTAT
2001 CCATTTATTTGCATTTATTGTGGGATTTCAGATATGAACGGTGTAAATTTGAGAAGCACTTATGCATACATGTGGGTGAA
2081 AAACCAATCTAATTTTGTATAAATAAAAACAGGCTCCTGGAAGGTGAAAAGTAGTCATTTGTTCTAAATCTATACATATT
2161 ACTTGTATCTAGTGCAGAATAAGCTATAACATCCCATTGAGGAATCTTAAATTTCATAGACATGTAAAGCTGAAGTAACT
2241 CTAAAGAGCAGATGCTTCAGAACCATCAGAAGGTTCTGGTCAACAGTCAGTATTATCTCTTAAATGTATATGTTGGTCAC
2321 TAATTGCACAAAATCTATAATTTGCCAGGGCTTTAGAGATTGAGTCAATATGTCATTTACCATGGTTTTCCCACTGAAGG
2401 CTTTAACTTTTCTGATAAAATAATATTTTAAATTTTCAAAAACCCATTCCTGAGGAGAACTACTTCTAGCATTCCTTTTC
2481 ATGATGTGCTTTTGTGCAGTAAGTAGCATTTTCGGCTACTTAACTTTACATTCCTCTTATTTTTCAGTTTCCAGTCAAGA
2561 TTATAAAAAGCAAATGATTGATATAATTTGATATTCATAGAGTTGTGCCTACCTTTAATGGAAAAATACATGTCAGATAC
2641 TTAGATGTTTATTGATATGAGACTATGTGGTTAAAAAACCCAAGTATGTCCATGTGTTTCTTATAAGGTACACTTGAAAC
2721 TAGTGAGTGTTTGTCACATTTCACTTTCATGGTATATAAAATGCAGTTTGCATATATAACTTGAATATCTGGTACTAGTT
2801 TTTTCACGCCTGCAATCTTGGAGTCTAGGTTGCCTTGTCTCTCCTATTTTTAAATAAGTGAAATTTGGGAGATTGTAAAA
2881 TCTGTAAAGTTTGTTTTGTGAAAATAAAATGTTCACAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gaccccCCAUCUACUUCUCu 5'
                || ||:|||| || 
Target 5' gctcctGGAAGGTGAAAAGt 3'
 2113 - 2132 126.00 -11.00
2 
miRNA  3' gacCCCCCAUCUACUUCUCu 5'
             |||  |||  |||||| 
Target 5' aaaGGGAATAG-AGAAGAGa 3'
 1220 - 1238 124.00 -17.10
3 
miRNA  3' gaccccccaucuACUUCUCu 5'
                      |||:||| 
Target 5' aaaacccattccTGAGGAGa 3'
 2439 - 2458 124.00 -8.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSM1398752 4 COSMIC
COSN31485644 31 COSMIC
COSN31540828 55 COSMIC
COSN15626357 74 COSMIC
COSN31778172 92 COSMIC
COSN30527513 102 COSMIC
COSN32065707 115 COSMIC
COSN15626358 242 COSMIC
COSN15626359 253 COSMIC
COSN31530265 267 COSMIC
COSN28701919 295 COSMIC
COSN31596486 368 COSMIC
COSN30115495 620 COSMIC
COSN25975320 643 COSMIC
COSN17037512 649 COSMIC
COSN30136449 656 COSMIC
COSN30533413 694 COSMIC
COSN30511825 851 COSMIC
COSN30141861 884 COSMIC
COSN31543280 943 COSMIC
COSN30143021 987 COSMIC
COSN30122207 1152 COSMIC
COSN30530247 1176 COSMIC
COSN31517238 1251 COSMIC
COSN26635208 1291 COSMIC
COSN30123603 1352 COSMIC
COSN30528966 1460 COSMIC
COSN30528324 1492 COSMIC
COSN30142150 1592 COSMIC
COSN26664645 1630 COSMIC
COSN30140366 1644 COSMIC
COSN1777886 1645 COSMIC
COSN26571333 1679 COSMIC
COSN30127448 1707 COSMIC
COSN31589852 1733 COSMIC
COSN8553666 1844 COSMIC
COSN30512434 1940 COSMIC
COSN1777888 1989 COSMIC
COSN15626360 2042 COSMIC
COSN31490021 2052 COSMIC
COSN31570092 2061 COSMIC
COSN24922731 2108 COSMIC
COSN26504526 2117 COSMIC
COSN23835647 2187 COSMIC
COSN30173119 2252 COSMIC
COSN26563729 2287 COSMIC
COSN31551630 2400 COSMIC
COSN31485778 2402 COSMIC
COSN30114118 2435 COSMIC
COSN30124849 2454 COSMIC
COSN31533735 2547 COSMIC
COSN30139138 2642 COSMIC
COSN30119235 2674 COSMIC
COSN1777890 2749 COSMIC
COSN30533747 2830 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1367977438 8 dbSNP
rs953898350 16 dbSNP
rs147020337 17 dbSNP
rs1456265171 23 dbSNP
rs1356219247 24 dbSNP
rs1430533138 29 dbSNP
rs899536425 29 dbSNP
rs1459406047 33 dbSNP
rs1161372071 34 dbSNP
rs773994069 38 dbSNP
rs779274606 40 dbSNP
rs761395714 41 dbSNP
rs138108589 47 dbSNP
rs771698451 53 dbSNP
rs1487785302 60 dbSNP
rs1199876173 61 dbSNP
rs143655240 62 dbSNP
rs1205212639 64 dbSNP
rs776927279 73 dbSNP
rs1424271809 74 dbSNP
rs1234906235 87 dbSNP
rs1431632235 90 dbSNP
rs1312412055 91 dbSNP
rs1029947223 92 dbSNP
rs972975351 105 dbSNP
rs1352225698 109 dbSNP
rs1308615270 110 dbSNP
rs1409163128 111 dbSNP
rs1369982553 119 dbSNP
rs1467723684 120 dbSNP
rs1175790103 121 dbSNP
rs545187598 128 dbSNP
rs1033482802 132 dbSNP
rs1183470979 141 dbSNP
rs1483030865 150 dbSNP
rs1461495484 156 dbSNP
rs1201684965 158 dbSNP
rs4953847 162 dbSNP
rs564670087 164 dbSNP
rs981585534 168 dbSNP
rs1288788517 169 dbSNP
rs1227642689 174 dbSNP
rs1348571475 180 dbSNP
rs1326921050 182 dbSNP
rs915905931 188 dbSNP
rs1302536842 190 dbSNP
rs1468452688 192 dbSNP
rs1472515688 193 dbSNP
rs971401454 193 dbSNP
rs927498330 195 dbSNP
rs527385045 199 dbSNP
rs1423940791 200 dbSNP
rs927905961 202 dbSNP
rs4953848 206 dbSNP
rs867676580 213 dbSNP
rs946079369 215 dbSNP
rs1207942111 220 dbSNP
rs1307726401 226 dbSNP
rs1326992266 229 dbSNP
rs1285922373 237 dbSNP
rs1247053368 241 dbSNP
rs1341087780 244 dbSNP
rs1312130556 264 dbSNP
rs941114495 264 dbSNP
rs1271943237 266 dbSNP
rs866484998 267 dbSNP
rs4953849 276 dbSNP
rs1457104284 280 dbSNP
rs1383413028 282 dbSNP
rs899485137 283 dbSNP
rs1223197056 287 dbSNP
rs1458894244 291 dbSNP
rs997873382 292 dbSNP
rs759656781 294 dbSNP
rs4953850 295 dbSNP
rs933920640 301 dbSNP
rs1487356217 310 dbSNP
rs1051337462 319 dbSNP
rs889631777 325 dbSNP
rs1187666569 330 dbSNP
rs550070250 334 dbSNP
rs569929698 338 dbSNP
rs539068274 339 dbSNP
rs1264881644 343 dbSNP
rs1243943999 345 dbSNP
rs1367613918 347 dbSNP
rs1188062791 358 dbSNP
rs1007050637 359 dbSNP
rs1420413328 364 dbSNP
rs1434676697 365 dbSNP
rs552581811 375 dbSNP
rs528853654 376 dbSNP
rs898145059 391 dbSNP
rs1406406145 392 dbSNP
rs957806527 394 dbSNP
rs1161131957 395 dbSNP
rs183400209 398 dbSNP
rs535131671 402 dbSNP
rs554718767 424 dbSNP
rs1167515236 429 dbSNP
rs981698806 432 dbSNP
rs1303036109 433 dbSNP
rs1034927207 434 dbSNP
rs574999283 445 dbSNP
rs1433253264 448 dbSNP
rs751847593 453 dbSNP
rs1199323069 461 dbSNP
rs1023030181 464 dbSNP
rs1220308213 467 dbSNP
rs958935947 468 dbSNP
rs537215236 469 dbSNP
rs1289818772 478 dbSNP
rs1362215234 482 dbSNP
rs914685999 490 dbSNP
rs1337710966 498 dbSNP
rs1276964608 501 dbSNP
rs1437719056 503 dbSNP
rs557670850 509 dbSNP
rs527240718 514 dbSNP
rs927839419 527 dbSNP
rs946151205 528 dbSNP
rs1294738312 537 dbSNP
rs1412246367 538 dbSNP
rs1370588990 553 dbSNP
rs1002034456 556 dbSNP
rs577102705 561 dbSNP
rs1426902365 562 dbSNP
rs1172941462 567 dbSNP
rs909706502 569 dbSNP
rs386649134 570 dbSNP
rs116040486 571 dbSNP
rs6726252 572 dbSNP
rs1039452929 573 dbSNP
rs933869670 574 dbSNP
rs1436290590 577 dbSNP
rs1281047251 578 dbSNP
rs1051061501 582 dbSNP
rs866483698 589 dbSNP
rs889611504 594 dbSNP
rs1217673149 601 dbSNP
rs1281803085 611 dbSNP
rs1242552212 620 dbSNP
rs942579885 626 dbSNP
rs1464598263 628 dbSNP
rs1306858306 629 dbSNP
rs1038513217 635 dbSNP
rs1360502687 648 dbSNP
rs1245238552 650 dbSNP
rs781475664 658 dbSNP
rs1272686382 660 dbSNP
rs1445259319 668 dbSNP
rs933614966 674 dbSNP
rs1412170312 675 dbSNP
rs1050756871 681 dbSNP
rs1411243975 688 dbSNP
rs758028596 689 dbSNP
rs1468715365 700 dbSNP
rs934920994 704 dbSNP
rs1211034893 708 dbSNP
rs1055144876 711 dbSNP
rs144056800 713 dbSNP
rs148213551 714 dbSNP
rs755885184 733 dbSNP
rs1330425178 734 dbSNP
rs906906366 737 dbSNP
rs1221551147 744 dbSNP
rs1380644286 752 dbSNP
rs1003528432 760 dbSNP
rs1284284266 763 dbSNP
rs1433859565 768 dbSNP
rs529914027 770 dbSNP
rs746269244 774 dbSNP
rs543235438 777 dbSNP
rs563601913 778 dbSNP
rs532444474 779 dbSNP
rs552643948 790 dbSNP
rs1384564492 795 dbSNP
rs566083166 796 dbSNP
rs1407041830 799 dbSNP
rs866587198 802 dbSNP
rs572189609 808 dbSNP
rs967399940 810 dbSNP
rs564201167 811 dbSNP
rs1002788181 826 dbSNP
rs373625961 828 dbSNP
rs572858659 828 dbSNP
rs977477047 831 dbSNP
rs1190873284 833 dbSNP
rs1260526196 835 dbSNP
rs1465668872 835 dbSNP
rs950814049 839 dbSNP
rs141206349 842 dbSNP
rs1289955232 843 dbSNP
rs1017289566 848 dbSNP
rs1380087617 849 dbSNP
rs1299433263 850 dbSNP
rs954744893 854 dbSNP
rs1360966633 858 dbSNP
rs1286902156 860 dbSNP
rs987111114 861 dbSNP
rs911167723 863 dbSNP
rs1438447888 864 dbSNP
rs942630961 871 dbSNP
rs1038178864 874 dbSNP
rs779884941 875 dbSNP
rs1424141191 878 dbSNP
rs919766187 888 dbSNP
rs929672788 890 dbSNP
rs1235860258 893 dbSNP
rs548679961 893 dbSNP
rs962515246 897 dbSNP
rs1046879094 898 dbSNP
rs1185204956 903 dbSNP
rs1489751704 904 dbSNP
rs1247847972 906 dbSNP
rs1178325129 910 dbSNP
rs1411913648 919 dbSNP
rs920981065 927 dbSNP
rs933731400 931 dbSNP
rs986988712 932 dbSNP
rs1219575166 936 dbSNP
rs1228595610 940 dbSNP
rs772374979 944 dbSNP
rs906854088 954 dbSNP
rs1002566503 958 dbSNP
rs1055886649 967 dbSNP
rs894695372 973 dbSNP
rs1293157141 976 dbSNP
rs1012248763 987 dbSNP
rs924286587 989 dbSNP
rs1407840418 992 dbSNP
rs1021707450 999 dbSNP
rs1302525648 1004 dbSNP
rs1403050151 1012 dbSNP
rs1414740663 1052 dbSNP
rs967557446 1054 dbSNP
rs998889428 1055 dbSNP
rs1168740507 1056 dbSNP
rs1435334232 1069 dbSNP
rs1030404346 1071 dbSNP
rs568447283 1086 dbSNP
rs1426345545 1091 dbSNP
rs954857993 1097 dbSNP
rs1490005202 1098 dbSNP
rs1356975802 1100 dbSNP
rs986127774 1103 dbSNP
rs910556979 1106 dbSNP
rs1280022088 1107 dbSNP
rs963961489 1118 dbSNP
rs974400828 1121 dbSNP
rs1349808596 1139 dbSNP
rs1280734843 1150 dbSNP
rs368724536 1162 dbSNP
rs537681789 1164 dbSNP
rs1249297023 1173 dbSNP
rs1211945454 1186 dbSNP
rs557271962 1188 dbSNP
rs1324517782 1198 dbSNP
rs1282430668 1211 dbSNP
rs1046829008 1212 dbSNP
rs928345709 1213 dbSNP
rs1352323282 1226 dbSNP
rs1200142103 1240 dbSNP
rs559368595 1245 dbSNP
rs1439592600 1248 dbSNP
rs1026846810 1253 dbSNP
rs549930486 1263 dbSNP
rs1055428244 1271 dbSNP
rs1296621608 1273 dbSNP
rs1467804660 1276 dbSNP
rs1407217577 1283 dbSNP
rs1176175185 1285 dbSNP
rs750775157 1286 dbSNP
rs1414916519 1299 dbSNP
rs1006654463 1301 dbSNP
rs894134381 1302 dbSNP
rs1182226384 1305 dbSNP
rs1251645129 1312 dbSNP
rs1011827521 1319 dbSNP
rs768165634 1320 dbSNP
rs1201775789 1321 dbSNP
rs568126306 1322 dbSNP
rs903349828 1325 dbSNP
rs1430491543 1328 dbSNP
rs999005307 1332 dbSNP
rs1030477972 1346 dbSNP
rs1478135964 1352 dbSNP
rs1268749678 1353 dbSNP
rs1171603179 1354 dbSNP
rs1238276281 1355 dbSNP
rs1399644045 1357 dbSNP
rs1411101229 1358 dbSNP
rs553201032 1363 dbSNP
rs954789076 1364 dbSNP
rs1008064587 1370 dbSNP
rs1383872285 1374 dbSNP
rs6594049 1382 dbSNP
rs1407979205 1385 dbSNP
rs1304705271 1387 dbSNP
rs1159602767 1403 dbSNP
rs1453714442 1407 dbSNP
rs1331509771 1416 dbSNP
rs963749854 1416 dbSNP
rs1189033613 1431 dbSNP
rs1444862020 1445 dbSNP
rs540634214 1449 dbSNP
rs115335761 1452 dbSNP
rs1466051231 1453 dbSNP
rs951294452 1454 dbSNP
rs924373383 1466 dbSNP
rs1204415441 1469 dbSNP
rs771688836 1472 dbSNP
rs982583358 1477 dbSNP
rs551599222 1489 dbSNP
rs938403100 1490 dbSNP
rs1314686811 1491 dbSNP
rs150708724 1492 dbSNP
rs1270279558 1495 dbSNP
rs915570900 1498 dbSNP
rs543648629 1500 dbSNP
rs1319395670 1505 dbSNP
rs6594050 1508 dbSNP
rs948968379 1516 dbSNP
rs1197221765 1517 dbSNP
rs1424803962 1518 dbSNP
rs532298563 1523 dbSNP
rs1476226536 1526 dbSNP
rs1044665191 1529 dbSNP
rs1450951909 1529 dbSNP
rs1192280740 1530 dbSNP
rs1445202035 1543 dbSNP
rs928795864 1544 dbSNP
rs938874908 1545 dbSNP
rs1047785924 1548 dbSNP
rs903424948 1549 dbSNP
rs1291169624 1550 dbSNP
rs775891529 1554 dbSNP
rs1344599092 1556 dbSNP
rs1271122365 1557 dbSNP
rs1427707955 1558 dbSNP
rs934930151 1561 dbSNP
rs546141413 1564 dbSNP
rs1038109322 1565 dbSNP
rs1364337298 1575 dbSNP
rs1391389188 1577 dbSNP
rs900543546 1587 dbSNP
rs1385953781 1588 dbSNP
rs1167070436 1596 dbSNP
rs1051847264 1610 dbSNP
rs996753070 1621 dbSNP
rs1028267313 1626 dbSNP
rs1268199134 1634 dbSNP
rs955167547 1639 dbSNP
rs1439745932 1643 dbSNP
rs1008489925 1645 dbSNP
rs1436152800 1647 dbSNP
rs879026315 1647 dbSNP
rs559652437 1651 dbSNP
rs1340094022 1656 dbSNP
rs531307056 1661 dbSNP
rs1224601116 1662 dbSNP
rs548268757 1663 dbSNP
rs955984046 1665 dbSNP
rs1018132920 1672 dbSNP
rs989953367 1683 dbSNP
rs1356270712 1687 dbSNP
rs1407888306 1688 dbSNP
rs568588805 1690 dbSNP
rs1404002196 1700 dbSNP
rs899144965 1707 dbSNP
rs1176902600 1710 dbSNP
rs1184295676 1718 dbSNP
rs1427197152 1719 dbSNP
rs530902738 1729 dbSNP
rs550622597 1733 dbSNP
rs570711340 1735 dbSNP
rs914228085 1753 dbSNP
rs994813689 1760 dbSNP
rs1233557509 1768 dbSNP
rs1264365658 1769 dbSNP
rs1448345038 1776 dbSNP
rs1026329138 1779 dbSNP
rs539613517 1786 dbSNP
rs1265373412 1788 dbSNP
rs1247064542 1790 dbSNP
rs763502161 1793 dbSNP
rs1447078343 1804 dbSNP
rs764673163 1805 dbSNP
rs1323409228 1807 dbSNP
rs1368915390 1809 dbSNP
rs1457399247 1810 dbSNP
rs553264463 1813 dbSNP
rs1439494389 1814 dbSNP
rs982697921 1815 dbSNP
rs368289006 1817 dbSNP
rs1035525758 1819 dbSNP
rs938836570 1821 dbSNP
rs751725111 1823 dbSNP
rs567035416 1824 dbSNP
rs1161237063 1827 dbSNP
rs1401223995 1828 dbSNP
rs1048370611 1830 dbSNP
rs1158130235 1839 dbSNP
rs907913945 1842 dbSNP
rs1184564322 1843 dbSNP
rs1461107958 1845 dbSNP
rs1241714235 1861 dbSNP
rs942107378 1867 dbSNP
rs533923691 1884 dbSNP
rs1457603694 1888 dbSNP
rs1320087381 1889 dbSNP
rs1363308561 1895 dbSNP
rs534643416 1896 dbSNP
rs1221642681 1903 dbSNP
rs1361111520 1904 dbSNP
rs1315253446 1908 dbSNP
rs947157629 1910 dbSNP
rs554265440 1911 dbSNP
rs1340378312 1912 dbSNP
rs1431375604 1920 dbSNP
rs201019601 1935 dbSNP
rs934877729 1936 dbSNP
rs1399083175 1937 dbSNP
rs1387182030 1939 dbSNP
rs1164405234 1940 dbSNP
rs376283534 1940 dbSNP
rs1444239189 1942 dbSNP
rs1383707332 1943 dbSNP
rs1330192600 1946 dbSNP
rs1188717752 1948 dbSNP
rs1208518960 1948 dbSNP
rs1491223083 1948 dbSNP
rs746426703 1948 dbSNP
rs773962454 1948 dbSNP
rs1214304179 1949 dbSNP
rs1361164220 1949 dbSNP
rs1406727014 1949 dbSNP
rs201947767 1949 dbSNP
rs373767394 1949 dbSNP
rs61290403 1949 dbSNP
rs796297128 1949 dbSNP
rs878951769 1949 dbSNP
rs1267033444 1950 dbSNP
rs1463272256 1955 dbSNP
rs1184891927 1956 dbSNP
rs1256307557 1962 dbSNP
rs1052008819 1964 dbSNP
rs1303848149 1967 dbSNP
rs1424243313 1968 dbSNP
rs1423144077 1970 dbSNP
rs1185280252 1973 dbSNP
rs890622257 1974 dbSNP
rs943554991 1989 dbSNP
rs1172946436 1991 dbSNP
rs1429531863 1996 dbSNP
rs574516298 1997 dbSNP
rs1386726974 2000 dbSNP
rs1185222487 2007 dbSNP
rs558727322 2008 dbSNP
rs1481714153 2023 dbSNP
rs1268964158 2025 dbSNP
rs530734127 2037 dbSNP
rs1039219522 2040 dbSNP
rs536756499 2041 dbSNP
rs1192133323 2043 dbSNP
rs1008020889 2057 dbSNP
rs767651239 2063 dbSNP
rs1293179301 2064 dbSNP
rs1225203463 2071 dbSNP
rs1346136484 2078 dbSNP
rs1401632560 2084 dbSNP
rs1283994954 2086 dbSNP
rs955931020 2088 dbSNP
rs139136813 2098 dbSNP
rs1011731394 2100 dbSNP
rs1462692945 2114 dbSNP
rs1354254472 2119 dbSNP
rs1168851269 2121 dbSNP
rs1021355020 2125 dbSNP
rs1430665669 2126 dbSNP
rs1198045009 2137 dbSNP
rs1479144602 2142 dbSNP
rs994928161 2144 dbSNP
rs577127199 2147 dbSNP
rs546003590 2151 dbSNP
rs1309723535 2157 dbSNP
rs1351656494 2160 dbSNP
rs1177354495 2162 dbSNP
rs1480112852 2166 dbSNP
rs750595260 2170 dbSNP
rs1228097204 2176 dbSNP
rs1286917511 2179 dbSNP
rs1326616201 2180 dbSNP
rs1205400267 2183 dbSNP
rs1324145112 2188 dbSNP
rs969673367 2202 dbSNP
rs1221635505 2212 dbSNP
rs559710939 2217 dbSNP
rs1211849745 2229 dbSNP
rs549809329 2233 dbSNP
rs979752927 2236 dbSNP
rs542246993 2239 dbSNP
rs1004124351 2241 dbSNP
rs72938300 2242 dbSNP
rs960572199 2260 dbSNP
rs187848115 2269 dbSNP
rs1013141367 2274 dbSNP
rs749070351 2284 dbSNP
rs1176292389 2285 dbSNP
rs1483382053 2291 dbSNP
rs1364962185 2294 dbSNP
rs1159266379 2296 dbSNP
rs1418143437 2296 dbSNP
rs1022810628 2309 dbSNP
rs1409541230 2322 dbSNP
rs1185176360 2337 dbSNP
rs1481522467 2338 dbSNP
rs550686577 2340 dbSNP
rs973460691 2345 dbSNP
rs1177005743 2350 dbSNP
rs1201628910 2352 dbSNP
rs1377305666 2358 dbSNP
rs1464556701 2359 dbSNP
rs192062107 2363 dbSNP
rs1316536854 2365 dbSNP
rs968405636 2365 dbSNP
rs567777044 2372 dbSNP
rs1046645 2376 dbSNP
rs931935095 2379 dbSNP
rs924279278 2383 dbSNP
rs35994763 2384 dbSNP
rs955741200 2390 dbSNP
rs553373882 2393 dbSNP
rs1394784245 2400 dbSNP
rs912105217 2401 dbSNP
rs1288910145 2406 dbSNP
rs1046646 2413 dbSNP
rs943645931 2414 dbSNP
rs1452488334 2419 dbSNP
rs556635716 2421 dbSNP
rs943943377 2427 dbSNP
rs1053068739 2430 dbSNP
rs1330145068 2437 dbSNP
rs772230258 2438 dbSNP
rs891608016 2439 dbSNP
rs1011385411 2452 dbSNP
rs1021302631 2455 dbSNP
rs546770067 2459 dbSNP
rs7421781 2461 dbSNP
rs1001119460 2469 dbSNP
rs920763424 2472 dbSNP
rs1204499189 2476 dbSNP
rs778818242 2481 dbSNP
rs930711580 2482 dbSNP
rs1283973842 2484 dbSNP
rs1248379473 2488 dbSNP
rs1360514341 2491 dbSNP
rs1314794095 2500 dbSNP
rs567200985 2514 dbSNP
rs886426360 2515 dbSNP
rs535765869 2516 dbSNP
rs183330686 2517 dbSNP
rs1230439583 2518 dbSNP
rs1358008221 2518 dbSNP
rs747714276 2526 dbSNP
rs1424897683 2530 dbSNP
rs963851286 2532 dbSNP
rs895694877 2534 dbSNP
rs34784982 2540 dbSNP
rs1476241312 2552 dbSNP
rs117575907 2571 dbSNP
rs973575167 2577 dbSNP
rs1476810466 2579 dbSNP
rs375730061 2580 dbSNP
rs1261112140 2583 dbSNP
rs921971333 2584 dbSNP
rs1490566850 2592 dbSNP
rs1023183179 2596 dbSNP
rs1208311035 2598 dbSNP
rs1204392715 2599 dbSNP
rs537009038 2616 dbSNP
rs1249565604 2619 dbSNP
rs1339180819 2622 dbSNP
rs968563684 2632 dbSNP
rs932049822 2635 dbSNP
rs771552349 2639 dbSNP
rs1191570219 2644 dbSNP
rs77125936 2645 dbSNP
rs955807230 2662 dbSNP
rs1411299151 2663 dbSNP
rs1170549864 2664 dbSNP
rs1167175377 2666 dbSNP
rs911865681 2667 dbSNP
rs1431410884 2670 dbSNP
rs987512144 2674 dbSNP
rs746630891 2675 dbSNP
rs188392467 2678 dbSNP
rs1480777666 2689 dbSNP
rs1246233046 2691 dbSNP
rs1196943728 2693 dbSNP
rs1439836752 2694 dbSNP
rs752951822 2695 dbSNP
rs539689269 2700 dbSNP
rs1198455776 2704 dbSNP
rs552880524 2705 dbSNP
rs1276333387 2711 dbSNP
rs1429224216 2722 dbSNP
rs1224694193 2724 dbSNP
rs935371681 2727 dbSNP
rs1053424454 2728 dbSNP
rs1443911423 2728 dbSNP
rs1368020989 2730 dbSNP
rs975062088 2731 dbSNP
rs1408058508 2732 dbSNP
rs920753357 2732 dbSNP
rs1042873711 2740 dbSNP
rs1437553441 2744 dbSNP
rs1424477204 2754 dbSNP
rs930826153 2759 dbSNP
rs1170961552 2771 dbSNP
rs770074183 2773 dbSNP
rs1233713681 2775 dbSNP
rs1178280928 2783 dbSNP
rs1456685772 2791 dbSNP
rs776043448 2798 dbSNP
rs1384764161 2799 dbSNP
rs1299134754 2808 dbSNP
rs939465337 2809 dbSNP
rs1275895426 2812 dbSNP
rs905744968 2816 dbSNP
rs1350920028 2834 dbSNP
rs1278545136 2835 dbSNP
rs1056834159 2838 dbSNP
rs113001438 2840 dbSNP
rs1337163870 2842 dbSNP
rs1451819275 2872 dbSNP
rs1357397553 2874 dbSNP
rs1013249997 2875 dbSNP
rs895446826 2878 dbSNP
rs1222023977 2886 dbSNP
rs1408843243 2891 dbSNP
rs1004565372 2898 dbSNP
rs35340131 2906 dbSNP
rs1264699683 2908 dbSNP
rs367647773 2917 dbSNP
rs796559578 2917 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084065. RNA binding protein: AGO2. Condition:CLIP_emetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gacCCCCCAUCUACUUCUCu 5'
             |||  |||  |||||| 
Target 5' -aaGGGAAUAG-AGAAGAGa 3'
 		1 - 18
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM1084065
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_emetine_AbnovaAb
Location of target site ENST00000356454.3 | 3UTR | AAGGGAAUAGAGAAGAGAUGGGACUAUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
181 hsa-miR-6515-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT059268 CELF1 CUGBP Elav-like family member 1 2 2
MIRT063207 ADIPOR2 adiponectin receptor 2 2 2
MIRT118973 SOWAHC sosondowah ankyrin repeat domain family member C 2 2
MIRT234292 PIP4K2B phosphatidylinositol-5-phosphate 4-kinase type 2 beta 2 2
MIRT305089 SRPRB SRP receptor beta subunit 2 4
MIRT316916 ATXN1 ataxin 1 2 2
MIRT320191 ITGB8 integrin subunit beta 8 2 2
MIRT366351 SCML2 Scm polycomb group protein like 2 2 2
MIRT443924 ZNF99 zinc finger protein 99 2 6
MIRT445622 CLIC4 chloride intracellular channel 4 2 2
MIRT447378 AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 2 2
MIRT463191 ZNF275 zinc finger protein 275 2 4
MIRT472656 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 4
MIRT478997 COLGALT1 collagen beta(1-O)galactosyltransferase 1 2 2
MIRT497221 MORC2 MORC family CW-type zinc finger 2 2 2
MIRT498343 PRELID2 PRELI domain containing 2 2 2
MIRT498362 PRMT3 protein arginine methyltransferase 3 2 2
MIRT501097 SLC5A6 solute carrier family 5 member 6 2 4
MIRT505086 ZBTB18 zinc finger and BTB domain containing 18 2 6
MIRT507527 DSTN destrin, actin depolymerizing factor 2 4
MIRT525793 SOD2 superoxide dismutase 2 2 2
MIRT544401 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT558808 CDK6 cyclin dependent kinase 6 2 4
MIRT559126 C11orf57 chromosome 11 open reading frame 57 2 2
MIRT566474 PEG10 paternally expressed 10 2 2
MIRT607261 GRAMD1B GRAM domain containing 1B 2 4
MIRT609251 LIN52 lin-52 DREAM MuvB core complex component 2 2
MIRT610065 MYBPC1 myosin binding protein C, slow type 2 2
MIRT610135 FOXI2 forkhead box I2 2 4
MIRT610280 PLCXD3 phosphatidylinositol specific phospholipase C X domain containing 3 2 2
MIRT611285 PAGR1 PAXIP1 associated glutamate rich protein 1 2 4
MIRT611353 KIAA2018 upstream transcription factor family member 3 2 2
MIRT611812 FCRL4 Fc receptor like 4 2 2
MIRT611898 TRPC3 transient receptor potential cation channel subfamily C member 3 2 2
MIRT612749 MYOCD myocardin 2 2
MIRT614180 FAM53B family with sequence similarity 53 member B 2 2
MIRT614825 PVRL4 nectin cell adhesion molecule 4 2 2
MIRT616702 UBXN2A UBX domain protein 2A 2 2
MIRT616970 HMGB1 high mobility group box 1 2 2
MIRT616992 COL19A1 collagen type XIX alpha 1 chain 2 2
MIRT617132 ZNF556 zinc finger protein 556 2 4
MIRT617595 NUDT5 nudix hydrolase 5 2 4
MIRT617997 KSR2 kinase suppressor of ras 2 2 2
MIRT619451 NUP214 nucleoporin 214 2 2
MIRT619507 TXLNB taxilin beta 2 2
MIRT619547 GABRG2 gamma-aminobutyric acid type A receptor gamma2 subunit 2 2
MIRT619719 FCF1 FCF1, rRNA-processing protein 2 2
MIRT619806 CDC42EP4 CDC42 effector protein 4 2 2
MIRT619939 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620456 CENPN centromere protein N 2 2
MIRT621054 DGKD diacylglycerol kinase delta 2 2
MIRT622730 PITPNM3 PITPNM family member 3 2 2
MIRT623010 ONECUT3 one cut homeobox 3 2 2
MIRT623432 KIAA1161 myogenesis regulating glycosidase (putative) 2 2
MIRT624379 CDH4 cadherin 4 2 2
MIRT624493 CABP4 calcium binding protein 4 2 2
MIRT625740 MTSS1 MTSS1, I-BAR domain containing 2 2
MIRT627048 HOXA13 homeobox A13 2 2
MIRT630857 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT632232 VTA1 vesicle trafficking 1 2 2
MIRT632978 E2F2 E2F transcription factor 2 2 2
MIRT635721 CCL16 C-C motif chemokine ligand 16 2 2
MIRT636489 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 2
MIRT637743 POLR3K RNA polymerase III subunit K 2 2
MIRT639610 SLC25A32 solute carrier family 25 member 32 2 4
MIRT639878 STC1 stanniocalcin 1 2 2
MIRT640507 ANTXR1 anthrax toxin receptor 1 2 2
MIRT640910 RAB13 RAB13, member RAS oncogene family 2 2
MIRT641864 STOML1 stomatin like 1 2 2
MIRT641989 OXSR1 oxidative stress responsive 1 2 2
MIRT642897 CASP1 caspase 1 2 2
MIRT643210 TYW3 tRNA-yW synthesizing protein 3 homolog 2 4
MIRT643970 FHL2 four and a half LIM domains 2 2 4
MIRT644517 TADA2A transcriptional adaptor 2A 2 2
MIRT644564 SPOP speckle type BTB/POZ protein 2 2
MIRT644738 CCDC174 coiled-coil domain containing 174 2 2
MIRT645518 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT645597 MRPS15 mitochondrial ribosomal protein S15 2 2
MIRT646262 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT646467 PRDM10 PR/SET domain 10 2 2
MIRT646623 CENPL centromere protein L 2 2
MIRT646797 EVC2 EvC ciliary complex subunit 2 2 2
MIRT647188 ANKRD45 ankyrin repeat domain 45 2 2
MIRT647254 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647895 EPN2 epsin 2 2 2
MIRT648129 SEMA3E semaphorin 3E 2 4
MIRT648133 JAGN1 jagunal homolog 1 2 2
MIRT648361 AKIP1 A-kinase interacting protein 1 2 2
MIRT648574 CAPN13 calpain 13 2 2
MIRT648622 CYB561A3 cytochrome b561 family member A3 2 2
MIRT649441 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT649456 WDR70 WD repeat domain 70 2 2
MIRT649479 CLDN16 claudin 16 2 2
MIRT649552 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT650060 CCDC134 coiled-coil domain containing 134 2 2
MIRT650272 KLF2 Kruppel like factor 2 2 4
MIRT650290 PYCARD PYD and CARD domain containing 2 2
MIRT651327 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT652194 TRIM39 tripartite motif containing 39 2 2
MIRT652284 TNS4 tensin 4 2 2
MIRT652386 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT652702 THBS2 thrombospondin 2 2 2
MIRT652782 TEAD1 TEA domain transcription factor 1 2 2
MIRT653087 SSR3 signal sequence receptor subunit 3 2 2
MIRT653836 SHISA9 shisa family member 9 2 2
MIRT654147 RPAP2 RNA polymerase II associated protein 2 2 2
MIRT655016 PLA2G16 phospholipase A2 group XVI 2 2
MIRT655065 PKIA cAMP-dependent protein kinase inhibitor alpha 2 2
MIRT655217 PFKM phosphofructokinase, muscle 2 2
MIRT655267 PER2 period circadian clock 2 2 2
MIRT655772 NPTX1 neuronal pentraxin 1 2 2
MIRT655791 NOVA2 NOVA alternative splicing regulator 2 2 2
MIRT656556 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT656831 KLF8 Kruppel like factor 8 2 2
MIRT656887 KIF1C kinesin family member 1C 2 2
MIRT657295 HOXB5 homeobox B5 2 2
MIRT657346 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT657967 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658082 FOXR2 forkhead box R2 2 2
MIRT658133 FMN1 formin 1 2 2
MIRT658163 FCHSD1 FCH and double SH3 domains 1 2 2
MIRT658787 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 2
MIRT658928 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT659989 C2CD2L C2CD2 like 2 2
MIRT660012 C1orf115 chromosome 1 open reading frame 115 2 4
MIRT660295 BICC1 BicC family RNA binding protein 1 2 2
MIRT662571 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT664406 AQP3 aquaporin 3 (Gill blood group) 2 2
MIRT667402 MIB1 mindbomb E3 ubiquitin protein ligase 1 2 2
MIRT667621 LIMCH1 LIM and calponin homology domains 1 2 2
MIRT668421 FAM217B family with sequence similarity 217 member B 2 2
MIRT668524 ESRRG estrogen related receptor gamma 2 2
MIRT668680 DR1 down-regulator of transcription 1 2 2
MIRT695383 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT702511 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT709032 KBTBD13 kelch repeat and BTB domain containing 13 2 2
MIRT710831 PLEKHO2 pleckstrin homology domain containing O2 2 2
MIRT710967 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711145 TMEM174 transmembrane protein 174 2 2
MIRT711176 EMCN endomucin 2 2
MIRT711205 SMIM14 small integral membrane protein 14 2 2
MIRT711589 SETD1A SET domain containing 1A 2 2
MIRT711751 DTX1 deltex E3 ubiquitin ligase 1 2 2
MIRT712258 PTPRN2 protein tyrosine phosphatase, receptor type N2 2 2
MIRT712376 MTPN myotrophin 2 2
MIRT713780 ZNF460 zinc finger protein 460 2 2
MIRT714560 LMTK2 lemur tyrosine kinase 2 2 2
MIRT714983 RAB21 RAB21, member RAS oncogene family 2 2
MIRT716253 PALM2 paralemmin 2 2 2
MIRT716362 RPS9 ribosomal protein S9 2 2
MIRT716485 SAMD7 sterile alpha motif domain containing 7 2 2
MIRT716640 DPY19L4 dpy-19 like 4 2 2
MIRT717034 KRTAP4-9 keratin associated protein 4-9 2 2
MIRT717422 SURF6 surfeit 6 2 2
MIRT717891 GBP4 guanylate binding protein 4 2 2
MIRT718646 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT719230 ARL11 ADP ribosylation factor like GTPase 11 2 2
MIRT719279 SETD7 SET domain containing lysine methyltransferase 7 2 2
MIRT719353 GDF7 growth differentiation factor 7 2 2
MIRT719513 TMEM175 transmembrane protein 175 2 2
MIRT719618 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT719882 NECAB3 N-terminal EF-hand calcium binding protein 3 2 2
MIRT720184 CMC4 C-X9-C motif containing 4 2 2
MIRT720249 FAM83F family with sequence similarity 83 member F 2 2
MIRT720343 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT720487 TMEM178B transmembrane protein 178B 2 2
MIRT720937 PPP1R3E protein phosphatase 1 regulatory subunit 3E 2 2
MIRT721168 NSG1 neuronal vesicle trafficking associated 1 2 2
MIRT721499 THRB thyroid hormone receptor beta 2 2
MIRT721518 DKK3 dickkopf WNT signaling pathway inhibitor 3 2 2
MIRT721570 SLC5A12 solute carrier family 5 member 12 2 2
MIRT721865 CENPJ centromere protein J 2 2
MIRT721871 RHOH ras homolog family member H 2 2
MIRT722330 PKHD1 PKHD1, fibrocystin/polyductin 2 2
MIRT722494 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT722775 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT723967 GPR146 G protein-coupled receptor 146 2 2
MIRT724488 CSNK1A1 casein kinase 1 alpha 1 2 2
MIRT724748 ZNF391 zinc finger protein 391 2 2
MIRT725274 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT725373 MTF2 metal response element binding transcription factor 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6515-3p Platinum 23939 sensitive High Ovarian Cancer tissue
hsa-miR-6515-3p Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-miR-6515-3p Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-6515-3p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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