miRTarBase - #MIRT128925


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pre-miRNA Information
pre-miRNA hsa-mir-6733   
Genomic Coordinates chr1: 43171652 - 43171712
Description Homo sapiens miR-6733 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6733-5p
Sequence 6| UGGGAAAGACAAACUCAGAGUU |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs953882106 3 dbSNP
rs371499741 9 dbSNP
rs778441909 21 dbSNP
rs1348902205 22 dbSNP
Putative Targets

Gene Information
Gene Symbol KMT2A   
Synonyms ALL-1, CXXC7, HRX, HTRX1, MLL, MLL1, MLL1A, TRX1, WDSTS
Description lysine methyltransferase 2A
Transcript NM_005933   
Expression
Putative miRNA Targets on KMT2A
3'UTR of KMT2A
(miRNA target sites are highlighted)		 
>KMT2A|NM_005933|3'UTR
   1 AGCTGCTCTTCTCCCCCAGTGTTGGAGTGCAAGGAGGCGGGGCCATCCAAAGCAACGCTGAAGGCCTTTTCCAGCAGCTG
  81 GGAGCTCCCGGATTGCGTGGCACAGCTGAGGGGCCTCTGTGATGGCTGAGCTCTCTTATGTCCTATACTCACATCAGACA
 161 TGTGATCATAGTCCCAGAGACAGAGTTGAGGTCTCGAAGAAAAGATCCATGATCGGCTTTCTCCTGGGGCCCCTCCAATT
 241 GTTTACTGTTAGAAAGTGGGAATGGGGTCCCTAGCAGACTTGCCTGGAAGGAGCCTATTATAGAGGGTTGGTTATGTTGG
 321 GAGATTGGGCCTGAATTTCTCCACAGAAATAAGTTGCCATCCTCAGGTTGGCCCTTTCCCAAGCACTGTAAGTGAGTGGG
 401 TCAGGCAAAGCCCCAAATGGAGGGTTGGTTAGATTCCTGACAGTTTGCCAGCCAGGCCCCACCTACAGCGTCTGTCGAAC
 481 AAACAGAGGTCTGGTGGTTTTCCCTACTATCCTCCCACTCGAGAGTTCACTTCTGGTTGGGAGACAGGATTCCTAGCACC
 561 TCCGGTGTCAAAAGGCTGTCATGGGGTTGTGCCAATTAATTACCAAACATTGAGCCTGCAGGCTTTGAGTGGGAGTGTTG
 641 CCCCCAGGAGCCTTATCTCAGCCAATTACCTTTCTTGACAGTAGGAGCGGCTTCCCTCTCCCATTCCCTCTTCACTCCCT
 721 TTTCTTCCTTTCCCCTGTCTTCATGCCACTGCTTTCCCATGCTTCTTTCGGGTTGTAGGGGAGACTGACTGCCTGCTCAA
 801 GGACACTCCCTGCTGGGCATAGGATGTGCCTGCAAAAAGTTCCCTGAGCCTGTAAGCACTCCAGGTGGGGAAGTGGACAG
 881 GAGCCATTGGTCATAACCAGACAGAATTTGGAAACATTTTCATAAAGCTCCATGGAGAGTTTTAAAGAAACATATGTAGC
 961 ATGATTTTGTAGGAGAGGAAAAAGATTATTTAAATAGGATTTAAATCATGCAACAACGAGAGTATCACAGCCAGGATGAC
1041 CCTTGGGTCCCATTCCTAAGACATGGTTACTTTATTTTCCCCTTGTTAAGACATAGGAAGACTTAATTTTTAAACGGTCA
1121 GTGTCCAGTTGAAGGCAGAACACTAATCAGATTTCAAGGCCCACAACTTGGGGACTAGACCACCTTATGTTGAGGGAACT
1201 CTGCCACCTGCGTGCAACCCACAGCTAAAGTAAATTCAATGACACTACTGCCCTGATTACTCCTTAGGATGTGGTCAAAA
1281 CAGCATCAAATGTTTCTTCTCTTCCTTTCCCCAAGACAGAGTCCTGAACCTGTTAAATTAAGTCATTGGATTTTACTCTG
1361 TTCTGTTTACAGTTTACTATTTAAGGTTTTATAAATGTAAATATATTTTGTATATTTTTCTATGAGAAGCACTTCATAGG
1441 GAGAAGCACTTATGACAAGGCTATTTTTTAAACCGCGGTATTATCCTAATTTAAAAGAAGATCGGTTTTTAATAATTTTT
1521 TATTTTCATAGGATGAAGTTAGAGAAAATATTCAGCTGTACACACAAAGTCTGGTTTTTCCTGCCCAACTTCCCCCTGGA
1601 AGGTGTACTTTTTGTTGTTTAATGTGTAGCTTGTTTGTGCCCTGTTGACATAAATGTTTCCTGGGTTTGCTCTTTGACAA
1681 TAAATGGAGAAGGAAGGTCACCCAACTCCATTGGGCCACTCCCCTCCTTCCCCTATTGAAGCTCCTCAAAAGGCTACAGT
1761 AATATCTTGATACAACAGATTCTCTTCTTTCCCGCCTCTCTCCTTTCCGGCGCAACTTCCAGAGTGGTGGGAGACGGCAA
1841 TCTTTACATTTCCCTCATCTTTCTTACTTCAGAGTTAGCAAACAACAAGTTGAATGGCAACTTGACATTTTTGCATCACC
1921 ATCTGCCTCATAGGCCACTCTTTCCTTTCCCTCTGCCCACCAAGTCCTCATATCTGCAGAGAACCCATTGATCACCTTGT
2001 GCCCTCTTTTGGGGCAGCCTGTTGAAACTGAAGCACAGTCTGACCACTCACGATAAAGCAGATTTTTCTCTGCCTCTGCC
2081 ACAAGGTTTCAGAGTAGTGTAGTCCAAGTAGAGGGTGGGGCACCCTTTTCTCGCCGCAAGAAGCCCATTCCTATGGAAGT
2161 CTAGCAAAGCAATACGACTCAGCCCAGCACTCTCTGCCCCAGGACTCATGGCTCTGCTGTGCCTTCCATCCTGGGCTCCC
2241 TTCTCTCCTGTGACCTTAAGAACTTTGTCTGGTGGCTTTGCTGGAACATTGTCACTGTTTTCACTGTCATGCAGGGAGCC
2321 CAGCACTGTGGCCAGGATGGCAGAGACTTCCTTGTCATCATGGAGAAGTGCCAGCAGGGGACTGGGAAAAGCACTCTACC
2401 CAGACCTCACCTCCCTTCCTCCTTTTGCCCATGAACAAGATGCAGTGGCCCTAGGGGTTCCACTAGTGTCTGCTTTCCTT
2481 TATTATTGCACTGTGTGAGGTTTTTTTGTAAATCCTTGTATTCCTATTTTTTTTAAAGAAAAAAAAAAAACCTTAAGCTG
2561 CATTTGTTACTGAAATGATTAATGCACTGATGGGTCCTGAATTCACCTTGAGAAAGACCCAAAGGCCAGTCAGGGGGTGG
2641 GGGGAACTCAGCTAAATAGACCTAGTTACTGCCCTGCTAGGCCATGCTGTACTGTGAGCCCCTCCTCACTCTCTACCAAC
2721 CCTAAACCCTGAGGACAGGGGAGGAACCCACAGCTTCCTTCTCCTGCCAGCTGCAGATGGTTTGCCTTGCCTTTCCACCC
2801 CCTAATTGTCAACCACAAAAATGAGAAATTCCTCTTCTAGCTCAGCCTTGAGTCCATTGCCAAATTTTCAGCACACCTGC
2881 CAGCAACTTGGGGGAATAAGCGAAGGTTTCCCTACAAGAGGGAAAGAAGGCAAAAACGGCACAGCTATCTCCAAACACAT
2961 CTGAGTTCATTTCAAAAGTGACCAAGGGAATCTCCGCACAAAAGTGCAGATTGAGGAATTGTGATGGGTCATTCCCAAGA
3041 ATCCCCCAAGGGGCATCCCAAATCCCTGAGGAGTAACAGCTGCAAACCTGGTCAGTTCTCAGTGAGAGCCAGCTCACTTA
3121 TAGCTTTGCTGCTAGAACCTGTTGTGGCTGCATTTCCTGGTGGCCAGTGACAACTGTGTAACCAGAATAGCTGCATGGCG
3201 CTGACCCTTTGGCCGGAACTTGGTCTCTTGGCTCCCTCCTTGGCCACCCACCACCTCTCGCACAGCCCCTCTGTTTTTAC
3281 ACCAATAACAAGAATTAAGGGGGAAGCCCTGGCAGCTATACGTTTTCAACCAGACTCCTTTGCCGGGACCCAGCCCGCCA
3361 CCCTGCTCGCCTCCGTCAAACCCCCGGCCAATGCAGTGAGCACCATGTAGCTCCCTTGATTTAAAAAAAATAAAAAATAA
3441 AAAAAAAAGGAAAAAAAAATACAACACACACACAAAAATAAAAAAAATATTCTAATGAATGTATCTTTCTAAAGGACTGA
3521 CGTTCAATCAAATATCTGAAAATACTAAAGGTCAAAACCTTGTCAGATGTTAACTTCTAAGTTCGGTTTGGGATTTTTTT
3601 TTTTTAATAGAAATCAAGTTGTTTTTGTTTTTAAGGAAAAGCGGGTCATTGCAAAGGGCTGGGTGTAATTTTATGTTTCA
3681 TTTCCTTCATTTTAAAGCAATACAAGGTTATGGAGCAGATGGTTTTGTGCCGAATCATGAATACTAGTCAAGTCACACAC
3761 TCTGGAAACTTGCAACTTTTTGTTTGTTTTGGTTTTCAAATAAATATAAATATGATATATATAGGAACTAATATAGTAAT
3841 GCACCATGTAACAAAGCCTAGTTCAGTCCATGGCTTTTAATTCTCTTAACACTATAGATAAGGATTGTGTTACAGTTGCT
3921 AGTAGCGGCAGGAAGATGTCAGGCTCACTTTCCTCTGATTCCCGAAATGGGGGGAACCTCTAACCATAAAGGAATGGTAG
4001 AACAGTCCATTCCTCGGATCAGAGAAAAATGCAGACATGGTGTCACCTGGATTTTTTTCTGCCCATGAATGTTGCCAGTC
4081 AGTACCTGTCCTCCTTGTTTCTCTATTTTTGGTTATGAATGTTGGGGTTACCACCTGCATTTAGGGGAAAATTGTGTTCT
4161 GTGCTTTCCTGGTATCTTGTTCCGAGGTACTCTAGTTCTGTCTTTCAACCAAGAAAATAGAATTGTGGTGTTTCTTTTAT
4241 TGAACTTTTAACAGTCTCTTTAGTAAATACAGGTAGTTGAATAATTGTTTCAAGAGCTCAACAGATGACAAGCTTCTTTT
4321 CTAGAAATAAGACATTTTTTGACAACTTTATCATGTATAACAGATCTGTTTTTTTTCCTTGTGTTCTTCCAAGCTTCTGG
4401 TTAGAGAAAAAGAGAAAAAAAAAAAAGGAAAATGTGTCTAAAGTCCATCAGTGTTAACTCCCTGTGACAGGGATGAAGGA
4481 AAATACTTTAATAGTTCAAAAAATAATAATGCTGAAAGCTCTCTACGAAAGACTGAATGTAAAAGTAAAAAGTGTACATA
4561 GTTGTAAAAAAAAGGAGTTTTTAAACATGTTTATTTTCTATGCACTTTTTTTTATTTAAGTGATAGTTTAATTAATAAAC
4641 ATGTCAAGTTTAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uugaGACUCAAAC--AGAAAGGGu 5'
              || || |||   ||||||| 
Target 5' catcCTCAGGTTGGCCCTTTCCCa 3'
 358 - 381 156.00 -14.70
2 
miRNA  3' uugaGACUCA-AACAGAAAGGGu 5'
              | || | |  |||||||| 
Target 5' acaaCAGATTCTCTTCTTTCCCg 3'
 1772 - 1794 150.00 -14.41
3 
miRNA  3' uugagacucAAACA--GAAAGGGu 5'
                   ||| |  ||||||| 
Target 5' tcactccctTTTCTTCCTTTCCCc 3'
 712 - 735 147.00 -10.61
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1204784 156 ClinVar
COSN30509207 26 COSMIC
COSN30520394 38 COSMIC
COSN30108371 39 COSMIC
COSN26585983 43 COSMIC
COSN20065462 57 COSMIC
COSN19772675 90 COSMIC
COSN26435166 97 COSMIC
COSN31489432 365 COSMIC
COSN31542483 379 COSMIC
COSN6607277 510 COSMIC
COSN31597449 548 COSMIC
COSN31483334 616 COSMIC
COSN14661261 715 COSMIC
COSN29110719 765 COSMIC
COSN31590129 862 COSMIC
COSN31539152 992 COSMIC
COSN25259633 1084 COSMIC
COSN5297562 1120 COSMIC
COSN25581173 1125 COSMIC
COSN25484907 1262 COSMIC
COSN19205746 1402 COSMIC
COSN26482401 1420 COSMIC
COSN8734118 1498 COSMIC
COSN25950983 1591 COSMIC
COSN27651816 1788 COSMIC
COSN31600984 1836 COSMIC
COSN31533332 1946 COSMIC
COSN31565910 1963 COSMIC
COSN28781695 2005 COSMIC
COSN8640947 2005 COSMIC
COSN24304115 2136 COSMIC
COSN31538482 2137 COSMIC
COSN31479530 2360 COSMIC
COSN19655866 2539 COSMIC
COSN27458538 2551 COSMIC
COSN28991892 2551 COSMIC
COSN22848299 2661 COSMIC
COSN31596771 2692 COSMIC
COSN30158227 2826 COSMIC
COSN32134720 2855 COSMIC
COSN31589204 2902 COSMIC
COSN23459792 3201 COSMIC
COSN24579981 3439 COSMIC
COSN27421504 3606 COSMIC
COSN1515800 3946 COSMIC
COSN26429340 4085 COSMIC
COSN15328624 4417 COSMIC
COSN28936367 4427 COSMIC
COSN14956666 4628 COSMIC
rs1064939 3445 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs377663970 5 dbSNP
rs1158671984 17 dbSNP
rs782685419 18 dbSNP
rs782273725 19 dbSNP
rs782397592 20 dbSNP
rs1269237453 23 dbSNP
rs782628184 25 dbSNP
rs782231421 31 dbSNP
rs1191651775 37 dbSNP
rs782349572 39 dbSNP
rs781944987 40 dbSNP
rs992190926 43 dbSNP
rs1210116424 45 dbSNP
rs1329252962 48 dbSNP
rs782060016 50 dbSNP
rs1236473095 57 dbSNP
rs530561756 58 dbSNP
rs963037297 67 dbSNP
rs34601576 83 dbSNP
rs1303933060 86 dbSNP
rs971679933 91 dbSNP
rs1370990001 97 dbSNP
rs188913109 98 dbSNP
rs1437291023 104 dbSNP
rs544251228 110 dbSNP
rs868961977 115 dbSNP
rs933037692 116 dbSNP
rs1451925433 125 dbSNP
rs555998401 131 dbSNP
rs1379130990 134 dbSNP
rs1176610217 138 dbSNP
rs1453712145 145 dbSNP
rs1393132990 151 dbSNP
rs781966368 153 dbSNP
rs1464925970 154 dbSNP
rs9332866 156 dbSNP
rs782081109 160 dbSNP
rs943207658 167 dbSNP
rs560417477 169 dbSNP
rs1235545718 173 dbSNP
rs893706912 187 dbSNP
rs1347623225 191 dbSNP
rs1301792760 196 dbSNP
rs947389323 208 dbSNP
rs527569031 210 dbSNP
rs1041713993 211 dbSNP
rs751137667 215 dbSNP
rs1317783851 216 dbSNP
rs1380741110 217 dbSNP
rs1404693345 229 dbSNP
rs1313731446 230 dbSNP
rs1433797652 231 dbSNP
rs1373433773 232 dbSNP
rs1170361401 233 dbSNP
rs1475731353 234 dbSNP
rs1371970047 236 dbSNP
rs568736836 239 dbSNP
rs1425169355 248 dbSNP
rs1256348542 252 dbSNP
rs1209710152 253 dbSNP
rs1485526060 257 dbSNP
rs1278660760 270 dbSNP
rs1002920017 276 dbSNP
rs1340733330 284 dbSNP
rs1269661451 294 dbSNP
rs1225260191 296 dbSNP
rs9332867 298 dbSNP
rs1373374061 300 dbSNP
rs781788826 316 dbSNP
rs564458541 320 dbSNP
rs782556948 331 dbSNP
rs1458930282 333 dbSNP
rs1417988844 355 dbSNP
rs963567878 381 dbSNP
rs971712404 382 dbSNP
rs1186717638 383 dbSNP
rs531618181 391 dbSNP
rs1255811044 395 dbSNP
rs3132889 406 dbSNP
rs1184860213 411 dbSNP
rs1438768164 413 dbSNP
rs1272843307 431 dbSNP
rs1194621508 457 dbSNP
rs3132888 457 dbSNP
rs1358502322 458 dbSNP
rs3132890 459 dbSNP
rs550188805 466 dbSNP
rs1273948494 467 dbSNP
rs1232871841 470 dbSNP
rs781874946 471 dbSNP
rs954373362 477 dbSNP
rs987657479 478 dbSNP
rs910287002 487 dbSNP
rs1326721504 489 dbSNP
rs573971 510 dbSNP
rs1394545113 521 dbSNP
rs1163632035 522 dbSNP
rs1413640545 524 dbSNP
rs1158791694 530 dbSNP
rs9332868 537 dbSNP
rs1180263718 556 dbSNP
rs547567552 558 dbSNP
rs1470254688 561 dbSNP
rs565946523 564 dbSNP
rs782216478 565 dbSNP
rs1041745511 566 dbSNP
rs903224579 568 dbSNP
rs938688664 575 dbSNP
rs1224570954 577 dbSNP
rs1349618995 582 dbSNP
rs1277604905 583 dbSNP
rs1235283690 584 dbSNP
rs1371725302 585 dbSNP
rs1057470202 610 dbSNP
rs1325155442 611 dbSNP
rs782460416 616 dbSNP
rs1013514213 617 dbSNP
rs1437998738 618 dbSNP
rs539714014 620 dbSNP
rs111910322 627 dbSNP
rs782677378 633 dbSNP
rs1399806349 648 dbSNP
rs1407680791 651 dbSNP
rs782272657 659 dbSNP
rs1455959392 666 dbSNP
rs1396146941 669 dbSNP
rs9332869 670 dbSNP
rs1467159783 680 dbSNP
rs1243938041 687 dbSNP
rs1026513277 689 dbSNP
rs1216740544 690 dbSNP
rs372359068 692 dbSNP
rs752518405 696 dbSNP
rs1281878684 713 dbSNP
rs1236292940 717 dbSNP
rs1348329991 725 dbSNP
rs1302537645 726 dbSNP
rs1232020809 728 dbSNP
rs1366716099 731 dbSNP
rs1270311891 735 dbSNP
rs782630773 736 dbSNP
rs1017791734 737 dbSNP
rs964465797 745 dbSNP
rs755922083 751 dbSNP
rs1335790710 758 dbSNP
rs9332870 770 dbSNP
rs537434700 771 dbSNP
rs1173505657 772 dbSNP
rs1453168803 773 dbSNP
rs1421700581 779 dbSNP
rs1187252423 781 dbSNP
rs185614326 784 dbSNP
rs574564055 787 dbSNP
rs1240507725 789 dbSNP
rs190236402 793 dbSNP
rs966532009 794 dbSNP
rs1485849182 798 dbSNP
rs1279403887 800 dbSNP
rs1208605320 831 dbSNP
rs543633398 833 dbSNP
rs782414041 836 dbSNP
rs777759428 842 dbSNP
rs978036919 853 dbSNP
rs182470418 855 dbSNP
rs1359254979 867 dbSNP
rs1285547316 870 dbSNP
rs1415039321 874 dbSNP
rs782224958 877 dbSNP
rs533671138 881 dbSNP
rs1433396683 882 dbSNP
rs1356848932 884 dbSNP
rs1171748401 887 dbSNP
rs782334550 894 dbSNP
rs1417489022 902 dbSNP
rs1190305238 908 dbSNP
rs572292854 917 dbSNP
rs948793037 920 dbSNP
rs1256538548 923 dbSNP
rs781940332 943 dbSNP
rs1481503064 944 dbSNP
rs1251745680 946 dbSNP
rs1203765542 947 dbSNP
rs899371935 953 dbSNP
rs1274559796 954 dbSNP
rs546038469 966 dbSNP
rs9332871 970 dbSNP
rs1293049176 978 dbSNP
rs576332588 979 dbSNP
rs373156033 984 dbSNP
rs185757845 992 dbSNP
rs1299193042 998 dbSNP
rs1442180377 999 dbSNP
rs782424472 1009 dbSNP
rs1167269536 1011 dbSNP
rs1462147450 1012 dbSNP
rs890682602 1018 dbSNP
rs189880899 1019 dbSNP
rs1163053685 1033 dbSNP
rs782021031 1036 dbSNP
rs529311706 1047 dbSNP
rs1176532182 1054 dbSNP
rs1479641598 1058 dbSNP
rs1254331218 1065 dbSNP
rs1017238880 1082 dbSNP
rs547505104 1098 dbSNP
rs782138472 1116 dbSNP
rs1319081463 1117 dbSNP
rs559471742 1123 dbSNP
rs1308208569 1124 dbSNP
rs1022045834 1126 dbSNP
rs1223708421 1151 dbSNP
rs1375400357 1155 dbSNP
rs1328528607 1170 dbSNP
rs34527196 1170 dbSNP
rs1441636614 1176 dbSNP
rs966563549 1179 dbSNP
rs1324081471 1181 dbSNP
rs1455587806 1187 dbSNP
rs1364131361 1199 dbSNP
rs1158192647 1200 dbSNP
rs1417224958 1212 dbSNP
rs1396750060 1222 dbSNP
rs9332872 1228 dbSNP
rs782764703 1240 dbSNP
rs1250651330 1241 dbSNP
rs139375279 1255 dbSNP
rs993240045 1263 dbSNP
rs915952321 1272 dbSNP
rs782086872 1275 dbSNP
rs1215441039 1279 dbSNP
rs1351963938 1293 dbSNP
rs1306214776 1315 dbSNP
rs1235703525 1316 dbSNP
rs150055331 1332 dbSNP
rs1299338226 1338 dbSNP
rs1384133083 1356 dbSNP
rs1037777236 1359 dbSNP
rs920660529 1361 dbSNP
rs778914461 1366 dbSNP
rs1288526958 1384 dbSNP
rs537778603 1386 dbSNP
rs1417562034 1404 dbSNP
rs1377076908 1417 dbSNP
rs1174161719 1421 dbSNP
rs1453764383 1423 dbSNP
rs929493020 1424 dbSNP
rs147317561 1426 dbSNP
rs1428604342 1436 dbSNP
rs1260520363 1439 dbSNP
rs1184435261 1450 dbSNP
rs568080544 1454 dbSNP
rs1212189816 1459 dbSNP
rs1347879677 1464 dbSNP
rs1047858452 1475 dbSNP
rs181226207 1476 dbSNP
rs944939831 1477 dbSNP
rs555893489 1478 dbSNP
rs1398438964 1479 dbSNP
rs535515166 1479 dbSNP
rs1357093862 1485 dbSNP
rs1313328514 1488 dbSNP
rs1434009618 1495 dbSNP
rs900200379 1501 dbSNP
rs782645001 1504 dbSNP
rs553913700 1505 dbSNP
rs1022078385 1515 dbSNP
rs1372019064 1517 dbSNP
rs1191037976 1534 dbSNP
rs1476008715 1545 dbSNP
rs902242443 1559 dbSNP
rs1260051089 1566 dbSNP
rs1189168365 1567 dbSNP
rs185883375 1581 dbSNP
rs1254609924 1589 dbSNP
rs868989328 1590 dbSNP
rs1198112001 1597 dbSNP
rs1340098179 1609 dbSNP
rs1250869510 1623 dbSNP
rs1034811353 1625 dbSNP
rs1337295466 1631 dbSNP
rs1294148622 1634 dbSNP
rs1413865904 1636 dbSNP
rs376129606 1640 dbSNP
rs1330749715 1645 dbSNP
rs990786132 1651 dbSNP
rs1395110323 1654 dbSNP
rs1168001389 1657 dbSNP
rs1462683369 1660 dbSNP
rs1163768772 1673 dbSNP
rs1472651332 1675 dbSNP
rs1367111746 1680 dbSNP
rs1184561925 1697 dbSNP
rs1023958381 1712 dbSNP
rs970105786 1715 dbSNP
rs539251803 1717 dbSNP
rs1469879852 1719 dbSNP
rs1273998637 1731 dbSNP
rs574692364 1732 dbSNP
rs1232918662 1736 dbSNP
rs1353961463 1737 dbSNP
rs920691579 1742 dbSNP
rs1239680201 1743 dbSNP
rs1335161689 1746 dbSNP
rs929360513 1747 dbSNP
rs1329247892 1750 dbSNP
rs1442382694 1757 dbSNP
rs1394623221 1758 dbSNP
rs983588262 1760 dbSNP
rs557958957 1763 dbSNP
rs912105452 1766 dbSNP
rs1403295722 1771 dbSNP
rs1412070432 1780 dbSNP
rs1160711973 1783 dbSNP
rs1470723757 1794 dbSNP
rs1380153209 1795 dbSNP
rs944864522 1800 dbSNP
rs1455605479 1803 dbSNP
rs1253754121 1807 dbSNP
rs1039317205 1809 dbSNP
rs900734066 1810 dbSNP
rs946384375 1813 dbSNP
rs1043384784 1814 dbSNP
rs1205447432 1816 dbSNP
rs1349694857 1820 dbSNP
rs1306940245 1822 dbSNP
rs1236433924 1832 dbSNP
rs1371066708 1833 dbSNP
rs1302141817 1836 dbSNP
rs902265471 1837 dbSNP
rs576240145 1846 dbSNP
rs1318571103 1847 dbSNP
rs1401605819 1848 dbSNP
rs1360309763 1855 dbSNP
rs1157356060 1863 dbSNP
rs1437163460 1870 dbSNP
rs1395766790 1879 dbSNP
rs1190748010 1881 dbSNP
rs1477090625 1887 dbSNP
rs1243996997 1890 dbSNP
rs1194209122 1891 dbSNP
rs1035174643 1902 dbSNP
rs370795871 1903 dbSNP
rs1212896788 1918 dbSNP
rs1348575746 1919 dbSNP
rs1279538296 1932 dbSNP
rs1216905602 1935 dbSNP
rs896346685 1936 dbSNP
rs1363491043 1945 dbSNP
rs1429649075 1957 dbSNP
rs1340255414 1958 dbSNP
rs543713821 1962 dbSNP
rs561716503 1964 dbSNP
rs1376538122 1971 dbSNP
rs1023569460 1985 dbSNP
rs141036837 1996 dbSNP
rs1168688973 2034 dbSNP
rs144157557 2052 dbSNP
rs1260746052 2053 dbSNP
rs1189732025 2060 dbSNP
rs1485877904 2062 dbSNP
rs559414688 2072 dbSNP
rs1207960881 2079 dbSNP
rs533517533 2083 dbSNP
rs1273142379 2088 dbSNP
rs950719013 2095 dbSNP
rs1217625750 2098 dbSNP
rs1315744735 2099 dbSNP
rs1294765213 2109 dbSNP
rs190548021 2113 dbSNP
rs1416939146 2115 dbSNP
rs983537315 2118 dbSNP
rs911950814 2121 dbSNP
rs944916885 2125 dbSNP
rs1446528796 2133 dbSNP
rs975294294 2134 dbSNP
rs1329700819 2135 dbSNP
rs1465178975 2136 dbSNP
rs1167407935 2137 dbSNP
rs1475384161 2148 dbSNP
rs1412858482 2154 dbSNP
rs1180012796 2155 dbSNP
rs1481612462 2161 dbSNP
rs1232937981 2162 dbSNP
rs782607124 2170 dbSNP
rs946911817 2173 dbSNP
rs1043998564 2175 dbSNP
rs1274624970 2177 dbSNP
rs1233551286 2196 dbSNP
rs1322675182 2203 dbSNP
rs1312514873 2210 dbSNP
rs1227103364 2215 dbSNP
rs1376093028 2224 dbSNP
rs923635039 2233 dbSNP
rs1446078029 2239 dbSNP
rs1398228236 2254 dbSNP
rs934970872 2255 dbSNP
rs1056237409 2257 dbSNP
rs1462197248 2261 dbSNP
rs571632155 2266 dbSNP
rs1162496414 2285 dbSNP
rs896198447 2290 dbSNP
rs1420672049 2296 dbSNP
rs563942926 2301 dbSNP
rs1408542745 2303 dbSNP
rs1177975103 2308 dbSNP
rs1437229423 2316 dbSNP
rs531079455 2325 dbSNP
rs1213896972 2330 dbSNP
rs782188607 2333 dbSNP
rs1265213341 2342 dbSNP
rs559420164 2342 dbSNP
rs1219735751 2346 dbSNP
rs1319136833 2349 dbSNP
rs1310568046 2350 dbSNP
rs1240123340 2351 dbSNP
rs1374716854 2354 dbSNP
rs1305800383 2355 dbSNP
rs1387550029 2358 dbSNP
rs147772025 2369 dbSNP
rs568014087 2382 dbSNP
rs1367097224 2402 dbSNP
rs1292008992 2405 dbSNP
rs1455118554 2433 dbSNP
rs1045265179 2442 dbSNP
rs1157956053 2458 dbSNP
rs762872 2464 dbSNP
rs1417830042 2466 dbSNP
rs1396357934 2480 dbSNP
rs1193785324 2499 dbSNP
rs1432094699 2501 dbSNP
rs1264775693 2519 dbSNP
rs1487040688 2527 dbSNP
rs566548407 2527 dbSNP
rs575361538 2527 dbSNP
rs1216510201 2535 dbSNP
rs1233979281 2539 dbSNP
rs1283100925 2539 dbSNP
rs1299409351 2539 dbSNP
rs1311712287 2539 dbSNP
rs1352223086 2539 dbSNP
rs1384187319 2539 dbSNP
rs898422476 2547 dbSNP
rs995424003 2551 dbSNP
rs1297425229 2562 dbSNP
rs1398057412 2570 dbSNP
rs1377136934 2571 dbSNP
rs1173121318 2581 dbSNP
rs1465063918 2586 dbSNP
rs868992372 2592 dbSNP
rs868914167 2616 dbSNP
rs1375476831 2617 dbSNP
rs1172046661 2621 dbSNP
rs1428813527 2629 dbSNP
rs1264327547 2635 dbSNP
rs1025510354 2638 dbSNP
rs1193321930 2639 dbSNP
rs577598609 2639 dbSNP
rs950750633 2640 dbSNP
rs1005274617 2644 dbSNP
rs528885633 2647 dbSNP
rs570015967 2647 dbSNP
rs1344377633 2661 dbSNP
rs1019048037 2665 dbSNP
rs1229882341 2669 dbSNP
rs547463710 2675 dbSNP
rs1318941929 2685 dbSNP
rs1064920 2702 dbSNP
rs772304745 2707 dbSNP
rs1357157916 2709 dbSNP
rs1334715775 2710 dbSNP
rs1395424735 2718 dbSNP
rs1399423860 2723 dbSNP
rs1299437191 2727 dbSNP
rs1465699762 2728 dbSNP
rs1422382406 2730 dbSNP
rs79648960 2738 dbSNP
rs1477019736 2742 dbSNP
rs922132927 2747 dbSNP
rs968200626 2760 dbSNP
rs1370615715 2761 dbSNP
rs1188821663 2772 dbSNP
rs1442417790 2773 dbSNP
rs1254153826 2781 dbSNP
rs1197573162 2797 dbSNP
rs1257608687 2798 dbSNP
rs979709240 2802 dbSNP
rs1336636776 2804 dbSNP
rs1284633771 2807 dbSNP
rs1243955928 2814 dbSNP
rs1338565930 2816 dbSNP
rs1309059833 2818 dbSNP
rs1446825120 2829 dbSNP
rs1398950998 2832 dbSNP
rs924168403 2835 dbSNP
rs117692849 2847 dbSNP
rs781996718 2858 dbSNP
rs917681168 2864 dbSNP
rs1472682994 2873 dbSNP
rs373756201 2875 dbSNP
rs947757610 2876 dbSNP
rs1044819259 2883 dbSNP
rs1440370856 2889 dbSNP
rs1196980095 2890 dbSNP
rs1237690142 2890 dbSNP
rs1470035423 2892 dbSNP
rs898370263 2900 dbSNP
rs995289686 2902 dbSNP
rs1354029829 2903 dbSNP
rs747397870 2905 dbSNP
rs1375484578 2909 dbSNP
rs1306542621 2913 dbSNP
rs1442630990 2925 dbSNP
rs1331268568 2931 dbSNP
rs1046990304 2933 dbSNP
rs1405098795 2934 dbSNP
rs782673496 2938 dbSNP
rs560562240 2939 dbSNP
rs1420905512 2946 dbSNP
rs1379752324 2957 dbSNP
rs1004898828 2959 dbSNP
rs1479049064 2970 dbSNP
rs1247465205 2976 dbSNP
rs1198448386 2983 dbSNP
rs1019331003 2996 dbSNP
rs183578164 2997 dbSNP
rs996698558 3000 dbSNP
rs1217245753 3002 dbSNP
rs1029068936 3007 dbSNP
rs1352977214 3008 dbSNP
rs1283815070 3011 dbSNP
rs569851377 3012 dbSNP
rs1235767789 3029 dbSNP
rs1345151213 3040 dbSNP
rs1273831305 3058 dbSNP
rs536899540 3065 dbSNP
rs782394009 3068 dbSNP
rs1329706312 3073 dbSNP
rs1300496262 3083 dbSNP
rs979570222 3085 dbSNP
rs924200937 3093 dbSNP
rs1360370607 3095 dbSNP
rs1157413239 3101 dbSNP
rs1416193889 3119 dbSNP
rs529612382 3122 dbSNP
rs1172185442 3130 dbSNP
rs188723449 3133 dbSNP
rs1477203259 3141 dbSNP
rs991839466 3142 dbSNP
rs917614871 3144 dbSNP
rs1194044279 3155 dbSNP
rs947740547 3160 dbSNP
rs1260885633 3163 dbSNP
rs1212183356 3172 dbSNP
rs980960817 3196 dbSNP
rs1277382267 3200 dbSNP
rs1217100955 3201 dbSNP
rs919661188 3209 dbSNP
rs931167295 3215 dbSNP
rs1046852610 3216 dbSNP
rs1340317364 3217 dbSNP
rs1296861560 3224 dbSNP
rs1450868432 3226 dbSNP
rs1359813245 3231 dbSNP
rs1333662770 3244 dbSNP
rs1412852905 3255 dbSNP
rs555249560 3260 dbSNP
rs1171696134 3261 dbSNP
rs1477346008 3269 dbSNP
rs1421275788 3270 dbSNP
rs1183520668 3281 dbSNP
rs516676 3285 dbSNP
rs887034466 3286 dbSNP
rs1473118142 3288 dbSNP
rs1236849063 3291 dbSNP
rs573640982 3292 dbSNP
rs1207330880 3301 dbSNP
rs1458734702 3320 dbSNP
rs1258244555 3323 dbSNP
rs1197674526 3339 dbSNP
rs868982438 3345 dbSNP
rs782102967 3346 dbSNP
rs782349849 3356 dbSNP
rs777149030 3357 dbSNP
rs1445862397 3358 dbSNP
rs1040958666 3363 dbSNP
rs541026115 3366 dbSNP
rs1465360756 3369 dbSNP
rs1397830957 3370 dbSNP
rs1166576693 3376 dbSNP
rs546358109 3386 dbSNP
rs781944045 3387 dbSNP
rs1180068215 3390 dbSNP
rs1440973897 3392 dbSNP
rs996173222 3401 dbSNP
rs1238295776 3423 dbSNP
rs61084765 3423 dbSNP
rs1177622639 3425 dbSNP
rs1456214673 3432 dbSNP
rs1224153624 3439 dbSNP
rs1244487041 3439 dbSNP
rs1289734790 3439 dbSNP
rs1322734995 3439 dbSNP
rs1379171199 3440 dbSNP
rs1310148906 3442 dbSNP
rs1064939 3445 dbSNP
rs903907763 3446 dbSNP
rs1295537181 3448 dbSNP
rs1349136472 3451 dbSNP
rs1458176791 3451 dbSNP
rs1001040546 3457 dbSNP
rs578023817 3458 dbSNP
rs1380363971 3461 dbSNP
rs1268978434 3464 dbSNP
rs1437282048 3464 dbSNP
rs956893796 3464 dbSNP
rs1191438889 3466 dbSNP
rs531789163 3473 dbSNP
rs992855751 3476 dbSNP
rs1246533849 3480 dbSNP
rs1287370175 3480 dbSNP
rs1356395088 3480 dbSNP
rs554753181 3480 dbSNP
rs879958298 3480 dbSNP
rs1239461979 3486 dbSNP
rs1025214813 3487 dbSNP
rs1315223449 3488 dbSNP
rs545499730 3497 dbSNP
rs1303648674 3501 dbSNP
rs1387602511 3502 dbSNP
rs1301126866 3504 dbSNP
rs1366636912 3504 dbSNP
rs1401633144 3506 dbSNP
rs969483889 3520 dbSNP
rs1297539372 3521 dbSNP
rs879953988 3523 dbSNP
rs1378912519 3524 dbSNP
rs1176300043 3525 dbSNP
rs1432307741 3528 dbSNP
rs1197626760 3542 dbSNP
rs919692191 3548 dbSNP
rs1264467403 3550 dbSNP
rs1216582922 3552 dbSNP
rs931031857 3559 dbSNP
rs1484915714 3561 dbSNP
rs1257901743 3563 dbSNP
rs1234222075 3579 dbSNP
rs982583973 3580 dbSNP
rs1281619064 3584 dbSNP
rs1220196468 3585 dbSNP
rs908416095 3587 dbSNP
rs782802145 3590 dbSNP
rs1041381838 3591 dbSNP
rs1380502519 3594 dbSNP
rs1403717872 3594 dbSNP
rs899722410 3599 dbSNP
rs931988450 3606 dbSNP
rs1403389992 3609 dbSNP
rs1172396208 3616 dbSNP
rs1478994685 3619 dbSNP
rs1424835428 3622 dbSNP
rs1193569088 3626 dbSNP
rs1050383568 3636 dbSNP
rs762361864 3639 dbSNP
rs1258894947 3650 dbSNP
rs903940491 3657 dbSNP
rs1482985518 3668 dbSNP
rs1261444107 3680 dbSNP
rs1200816027 3708 dbSNP
rs1318302977 3711 dbSNP
rs1277404806 3716 dbSNP
rs1225140018 3719 dbSNP
rs1000988402 3723 dbSNP
rs1342120551 3728 dbSNP
rs1313383907 3732 dbSNP
rs1394892939 3733 dbSNP
rs1031085986 3740 dbSNP
rs550403686 3749 dbSNP
rs1332916596 3754 dbSNP
rs1465876268 3762 dbSNP
rs1167645639 3765 dbSNP
rs1460792774 3779 dbSNP
rs549528801 3779 dbSNP
rs548175500 3784 dbSNP
rs1188879240 3786 dbSNP
rs770459353 3798 dbSNP
rs1241406220 3806 dbSNP
rs1180742178 3807 dbSNP
rs1458430947 3809 dbSNP
rs1193814943 3812 dbSNP
rs1257667787 3812 dbSNP
rs1358225186 3829 dbSNP
rs563702560 3834 dbSNP
rs1013737020 3835 dbSNP
rs1025666829 3836 dbSNP
rs531138900 3839 dbSNP
rs879975301 3853 dbSNP
rs1379937223 3855 dbSNP
rs1310886363 3856 dbSNP
rs35085183 3868 dbSNP
rs1446899317 3881 dbSNP
rs1375614603 3886 dbSNP
rs1326483617 3893 dbSNP
rs1389981709 3895 dbSNP
rs969641329 3903 dbSNP
rs1393394352 3920 dbSNP
rs1164314381 3921 dbSNP
rs1424664937 3927 dbSNP
rs543283835 3928 dbSNP
rs1383449772 3943 dbSNP
rs1160474646 3945 dbSNP
rs1440427726 3951 dbSNP
rs1232465158 3963 dbSNP
rs1026570489 3964 dbSNP
rs952380684 3965 dbSNP
rs1267880124 3969 dbSNP
rs1453080679 3969 dbSNP
rs1209150281 3970 dbSNP
rs1357116692 3973 dbSNP
rs561563033 3977 dbSNP
rs1352365014 3981 dbSNP
rs1277387555 3982 dbSNP
rs528822610 3985 dbSNP
rs191872671 3992 dbSNP
rs1333190057 3995 dbSNP
rs1324692603 3996 dbSNP
rs1404737802 3997 dbSNP
rs1364206687 4001 dbSNP
rs782112729 4010 dbSNP
rs1300608975 4016 dbSNP
rs184068654 4017 dbSNP
rs1407398232 4019 dbSNP
rs1157040605 4023 dbSNP
rs1479162016 4024 dbSNP
rs1378436941 4038 dbSNP
rs532856607 4040 dbSNP
rs1489807824 4041 dbSNP
rs1217313386 4052 dbSNP
rs1265187118 4052 dbSNP
rs976580913 4053 dbSNP
rs1281612288 4062 dbSNP
rs1220588459 4063 dbSNP
rs142585619 4065 dbSNP
rs186509514 4066 dbSNP
rs1223226763 4076 dbSNP
rs1344073470 4078 dbSNP
rs1401212913 4081 dbSNP
rs1344671720 4082 dbSNP
rs1316239115 4087 dbSNP
rs1416244819 4089 dbSNP
rs1403132848 4094 dbSNP
rs1176009189 4107 dbSNP
rs932516051 4113 dbSNP
rs1479321221 4122 dbSNP
rs1425559844 4127 dbSNP
rs1194299235 4130 dbSNP
rs1475079036 4146 dbSNP
rs1240300414 4148 dbSNP
rs1211538375 4160 dbSNP
rs1042991016 4184 dbSNP
rs1262094685 4197 dbSNP
rs1201425996 4219 dbSNP
rs1321844310 4235 dbSNP
rs1260457650 4239 dbSNP
rs1219648588 4253 dbSNP
rs1361788244 4258 dbSNP
rs1268965009 4259 dbSNP
rs1450241923 4265 dbSNP
rs1341198617 4274 dbSNP
rs1336287165 4279 dbSNP
rs1468496663 4283 dbSNP
rs79406650 4286 dbSNP
rs936643878 4291 dbSNP
rs191454309 4294 dbSNP
rs1409162876 4297 dbSNP
rs892528666 4300 dbSNP
rs567204017 4306 dbSNP
rs1046527478 4316 dbSNP
rs1472821496 4317 dbSNP
rs1242057351 4321 dbSNP
rs1181352596 4322 dbSNP
rs1458774618 4333 dbSNP
rs1238413233 4335 dbSNP
rs905447310 4342 dbSNP
rs1205613910 4355 dbSNP
rs1002451007 4357 dbSNP
rs1307307939 4362 dbSNP
rs1271478620 4367 dbSNP
rs1027179370 4368 dbSNP
rs1360252646 4369 dbSNP
rs1450565297 4369 dbSNP
rs76962363 4369 dbSNP
rs1003809407 4370 dbSNP
rs1332339000 4378 dbSNP
rs1441177196 4379 dbSNP
rs538191855 4396 dbSNP
rs1352582714 4400 dbSNP
rs1166822986 4403 dbSNP
rs1405938834 4403 dbSNP
rs1384545625 4407 dbSNP
rs1161056348 4413 dbSNP
rs1238356836 4415 dbSNP
rs1441035489 4415 dbSNP
rs535975716 4415 dbSNP
rs183985126 4417 dbSNP
rs1224412999 4418 dbSNP
rs1490640622 4424 dbSNP
rs1291700473 4425 dbSNP
rs1243825809 4428 dbSNP
rs377478871 4431 dbSNP
rs140845386 4435 dbSNP
rs1307936361 4441 dbSNP
rs1223495715 4448 dbSNP
rs1370888929 4449 dbSNP
rs1295008266 4460 dbSNP
rs1015770722 4462 dbSNP
rs1364840277 4469 dbSNP
rs1301239572 4484 dbSNP
rs1420961238 4485 dbSNP
rs1380421628 4498 dbSNP
rs1157913081 4502 dbSNP
rs1416999680 4502 dbSNP
rs1426847592 4520 dbSNP
rs187140142 4525 dbSNP
rs1480988719 4527 dbSNP
rs1268743957 4528 dbSNP
rs782450149 4539 dbSNP
rs1220949633 4541 dbSNP
rs1489307681 4546 dbSNP
rs1261443849 4554 dbSNP
rs921145442 4562 dbSNP
rs547753576 4566 dbSNP
rs1303716344 4572 dbSNP
rs1223845965 4573 dbSNP
rs1344693904 4578 dbSNP
rs1281268380 4585 dbSNP
rs557438229 4587 dbSNP
rs782564346 4587 dbSNP
rs1287722792 4602 dbSNP
rs1176366797 4606 dbSNP
rs1360498008 4606 dbSNP
rs1451004006 4606 dbSNP
rs1480957574 4614 dbSNP
rs953850151 4631 dbSNP
rs978704401 4632 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uugagacucaAAC--AGAAAGGGu 5'
                    |||   ||||||| 
Target 5' ----------UUGGCCCUUUCCCa 3'
 		1 - 14
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000534358.1 | 3UTR | UUGGCCCUUUCCCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000534358.1 | 3UTR | UUGGCCCUUUCCCAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
161 hsa-miR-6733-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT075325 SF3B3 splicing factor 3b subunit 3 2 4
MIRT082764 EPN1 epsin 1 2 4
MIRT119868 NRBP1 nuclear receptor binding protein 1 2 2
MIRT124577 PRRC2B proline rich coiled-coil 2B 2 2
MIRT126718 WAC WW domain containing adaptor with coiled-coil 2 2
MIRT128925 KMT2A lysine methyltransferase 2A 2 2
MIRT135191 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 2
MIRT145630 LASP1 LIM and SH3 protein 1 2 2
MIRT175518 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT188406 ATXN7L3B ataxin 7 like 3B 2 2
MIRT192486 KNSTRN kinetochore localized astrin/SPAG5 binding protein 2 2
MIRT208383 SLC25A36 solute carrier family 25 member 36 2 2
MIRT216690 F2R coagulation factor II thrombin receptor 2 2
MIRT235839 FAM217B family with sequence similarity 217 member B 2 2
MIRT257000 RGMB repulsive guidance molecule family member b 2 2
MIRT266594 POGZ pogo transposable element derived with ZNF domain 2 2
MIRT273614 SP1 Sp1 transcription factor 2 2
MIRT276567 AKAP11 A-kinase anchoring protein 11 2 2
MIRT285544 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT291540 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT317159 E2F3 E2F transcription factor 3 2 4
MIRT340688 THRAP3 thyroid hormone receptor associated protein 3 2 2
MIRT366934 OGT O-linked N-acetylglucosamine (GlcNAc) transferase 2 2
MIRT376193 AP1M1 adaptor related protein complex 1 mu 1 subunit 2 2
MIRT441983 TSTD2 thiosulfate sulfurtransferase like domain containing 2 2 2
MIRT442059 POU3F2 POU class 3 homeobox 2 2 6
MIRT443190 PDHA1 pyruvate dehydrogenase E1 alpha 1 subunit 2 2
MIRT445133 CMTM4 CKLF like MARVEL transmembrane domain containing 4 2 2
MIRT445881 WBP1L WW domain binding protein 1 like 2 2
MIRT449359 DPP6 dipeptidyl peptidase like 6 2 2
MIRT451399 FARSA phenylalanyl-tRNA synthetase alpha subunit 2 2
MIRT451802 CDCA3 cell division cycle associated 3 2 4
MIRT452295 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 2
MIRT452494 HMGXB3 HMG-box containing 3 2 2
MIRT453354 ZNF3 zinc finger protein 3 2 2
MIRT453375 CACNA2D2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 2 2
MIRT453719 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT453839 SDK1 sidekick cell adhesion molecule 1 2 2
MIRT454009 ALKBH5 alkB homolog 5, RNA demethylase 2 2
MIRT454371 PIGS phosphatidylinositol glycan anchor biosynthesis class S 2 2
MIRT454729 ARSK arylsulfatase family member K 2 2
MIRT455227 KIAA2013 KIAA2013 2 2
MIRT455866 SLC35C2 solute carrier family 35 member C2 2 2
MIRT456386 KLHL12 kelch like family member 12 2 2
MIRT457017 ACADSB acyl-CoA dehydrogenase, short/branched chain 2 2
MIRT457048 NEGR1 neuronal growth regulator 1 2 2
MIRT457402 BACE2 beta-site APP-cleaving enzyme 2 2 2
MIRT457808 KLHL25 kelch like family member 25 2 2
MIRT458361 C3orf80 chromosome 3 open reading frame 80 2 2
MIRT458678 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT459629 GABARAP GABA type A receptor-associated protein 2 2
MIRT460955 MUL1 mitochondrial E3 ubiquitin protein ligase 1 2 2
MIRT462241 PRSS16 protease, serine 16 2 2
MIRT462472 FIZ1 FLT3 interacting zinc finger 1 2 2
MIRT462572 STS steroid sulfatase 2 2
MIRT462931 ZNF827 zinc finger protein 827 2 2
MIRT463442 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT464129 VPS35 VPS35, retromer complex component 2 2
MIRT464688 UBE2V1 ubiquitin conjugating enzyme E2 V1 2 2
MIRT465653 TNPO2 transportin 2 2 2
MIRT465951 TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough 2 2
MIRT466032 TMEM189 transmembrane protein 189 2 2
MIRT466577 TBC1D2B TBC1 domain family member 2B 2 2
MIRT467506 SMG1 SMG1, nonsense mediated mRNA decay associated PI3K related kinase 2 2
MIRT467786 SLC2A14 solute carrier family 2 member 14 2 2
MIRT468104 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT468292 SFT2D2 SFT2 domain containing 2 2 2
MIRT469004 RNF41 ring finger protein 41 2 2
MIRT469753 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT473205 MINK1 misshapen like kinase 1 2 4
MIRT473314 MEX3A mex-3 RNA binding family member A 2 2
MIRT473549 MAVS mitochondrial antiviral signaling protein 2 2
MIRT474269 LATS2 large tumor suppressor kinase 2 2 2
MIRT475111 IPPK inositol-pentakisphosphate 2-kinase 2 2
MIRT475436 HYOU1 hypoxia up-regulated 1 2 2
MIRT475751 HDLBP high density lipoprotein binding protein 2 2
MIRT475972 GTPBP2 GTP binding protein 2 2 2
MIRT476480 GATAD2A GATA zinc finger domain containing 2A 2 2
MIRT476595 G3BP1 G3BP stress granule assembly factor 1 2 2
MIRT476684 FURIN furin, paired basic amino acid cleaving enzyme 2 2
MIRT477261 ERGIC2 ERGIC and golgi 2 2 2
MIRT477647 EFNA1 ephrin A1 2 2
MIRT477790 E2F2 E2F transcription factor 2 2 2
MIRT477871 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT478012 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT479558 CDC5L cell division cycle 5 like 2 4
MIRT480420 C17orf85 nuclear cap binding subunit 3 2 2
MIRT480642 BSCL2 BSCL2, seipin lipid droplet biogenesis associated 2 2
MIRT480778 BMP2 bone morphogenetic protein 2 2 2
MIRT481554 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT481689 AR androgen receptor 2 2
MIRT481836 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT483138 FOXC1 forkhead box C1 2 2
MIRT483919 SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 2 2
MIRT484202 SUMO1 small ubiquitin-like modifier 1 2 2
MIRT484433 RAB7A RAB7A, member RAS oncogene family 2 4
MIRT485544 GP5 glycoprotein V platelet 2 2
MIRT486558 SLC38A4 solute carrier family 38 member 4 2 2
MIRT486727 MGAT5B mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B 2 4
MIRT490490 GLRA3 glycine receptor alpha 3 2 2
MIRT490682 SSTR1 somatostatin receptor 1 2 2
MIRT490792 PSMD3 proteasome 26S subunit, non-ATPase 3 2 2
MIRT491060 ACVR1B activin A receptor type 1B 2 4
MIRT492614 PNRC1 proline rich nuclear receptor coactivator 1 2 2
MIRT492768 PDGFB platelet derived growth factor subunit B 2 2
MIRT493988 EHD1 EH domain containing 1 2 2
MIRT494510 BDNF-AS BDNF antisense RNA 2 2
MIRT494755 AP3M2 adaptor related protein complex 3 mu 2 subunit 2 2
MIRT499802 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT501336 RNF44 ring finger protein 44 2 4
MIRT509490 CENPA centromere protein A 2 2
MIRT509643 ZNF354B zinc finger protein 354B 2 10
MIRT510147 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510567 UNG uracil DNA glycosylase 2 6
MIRT525087 FRK fyn related Src family tyrosine kinase 2 2
MIRT528452 NXT2 nuclear transport factor 2 like export factor 2 2 4
MIRT531970 C12orf49 chromosome 12 open reading frame 49 2 2
MIRT532084 RTTN rotatin 2 2
MIRT532756 LDHD lactate dehydrogenase D 2 2
MIRT535072 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 2
MIRT535637 NPEPPS aminopeptidase puromycin sensitive 2 2
MIRT545410 EIF4A3 eukaryotic translation initiation factor 4A3 2 4
MIRT545911 ZFP91 ZFP91 zinc finger protein 2 4
MIRT548007 GRB2 growth factor receptor bound protein 2 2 4
MIRT548545 DR1 down-regulator of transcription 1 2 2
MIRT550075 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT553730 TBRG1 transforming growth factor beta regulator 1 2 2
MIRT557569 GNPTAB N-acetylglucosamine-1-phosphate transferase alpha and beta subunits 2 2
MIRT558025 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558139 ENC1 ectodermal-neural cortex 1 2 2
MIRT560173 COA1 cytochrome c oxidase assembly factor 1 homolog 2 2
MIRT561700 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT565101 UBE3C ubiquitin protein ligase E3C 2 2
MIRT565739 SESN3 sestrin 3 2 2
MIRT566669 NACC2 NACC family member 2 2 2
MIRT567040 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT569627 ZNF746 zinc finger protein 746 2 2
MIRT570530 RPH3A rabphilin 3A 2 2
MIRT570939 CPE carboxypeptidase E 2 2
MIRT574774 FGF2 fibroblast growth factor 2 2 2
MIRT620120 LACC1 laccase domain containing 1 2 2
MIRT624338 CISD1 CDGSH iron sulfur domain 1 2 2
MIRT625434 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT640528 TET3 tet methylcytosine dioxygenase 3 2 4
MIRT646916 TRIM14 tripartite motif containing 14 2 2
MIRT656298 METTL1 methyltransferase like 1 2 2
MIRT660192 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT661360 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT667769 KCTD11 potassium channel tetramerization domain containing 11 2 2
MIRT683187 TAF1D TATA-box binding protein associated factor, RNA polymerase I subunit D 2 2
MIRT685843 ANGEL1 angel homolog 1 2 2
MIRT688553 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT689424 CYB561 cytochrome b561 2 2
MIRT698505 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT701232 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702506 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT706488 SEPT6 septin 6 2 2
MIRT713774 ZNF460 zinc finger protein 460 2 2
MIRT716991 ARL6IP4 ADP ribosylation factor like GTPase 6 interacting protein 4 2 2
MIRT722644 MPEG1 macrophage expressed 1 2 2
MIRT725254 PARVB parvin beta 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-6733 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-6733 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-6733-5p Gefitinib 123631 NSC715055 approved sensitive cell line (PC9)
hsa-miR-6733-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-6733-5p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-6733-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)

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