pre-miRNA Information | |
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pre-miRNA | hsa-mir-4271 |
Genomic Coordinates | chr3: 49274120 - 49274186 |
Description | Homo sapiens miR-4271 stem-loop |
Comment | None |
RNA Secondary Structure |
Mature miRNA Information | |||||||||||||||||||
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Mature miRNA | hsa-miR-4271 | ||||||||||||||||||
Sequence | 39| GGGGGAAGAAAAGGUGGGG |57 | ||||||||||||||||||
Evidence | Experimental | ||||||||||||||||||
Experiments | SOLiD | DRVs in miRNA |
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SNPs in miRNA |
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Putative Targets |
miRNA Expression profile | |
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Human miRNA Tissue Atlas | |
Circulating MicroRNA Expression Profiling |
Gene Information | |||||||||||||||||||||
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Gene Symbol | SKI | ||||||||||||||||||||
Synonyms | SGS, SKV | ||||||||||||||||||||
Description | SKI proto-oncogene | ||||||||||||||||||||
Transcript | NM_003036 | ||||||||||||||||||||
Expression | |||||||||||||||||||||
Putative miRNA Targets on SKI | |||||||||||||||||||||
3'UTR of SKI (miRNA target sites are highlighted) |
>SKI|NM_003036|3'UTR 1 ATTCCGTGCCTGCCGCCGCAGCGCCGCCGACAACGCGGGTGCAGGGGGGCGCGGCTGGGCGGTGCAGCTCCGCCCGGCTC 81 CGCCCCTGCAGCCCACACAGCACAACGTCTTACCGTGCCTATTACCAAGCGAGTGTTTGTAACCATGTAGTTTTGGAACC 161 CACTGCAAAATTTTCTACTGGCCAAGTTCAAGTGAGTAAGCCGCGTCCCCCAACTACAGCTGGAGACGGGGCCAGCTCGG 241 CGGCCTGCTGGTCCTCTGCTTGCTGGAACATTCTAACATTTACACTTTTGTTATAAGCTATTTAAAACCAGTAAGGAGAC 321 TTGAAATTCAGAAAATCAACACATTTTTAAATGACTAACTTCTAAAAGCCCCAACACATGACGCCATCTGAAGACCCGCA 401 ACGGAGTGGGGGTGGCGGCCGCCCCACCCTCCCCACCCGGGGAAGCCATCACAGCTCATCTGCCCGCGGCTGCGTGAGGA 481 CAGCAGGGGTTTTTCTTCAGAGTCTATTTTTTCAGCGACAAGGACCCAGGTCTTCCTGCTGCTGCCAGGGAGAGCAGGGA 561 CAGTGCCGCGTGCGAGATGAGCTCGAACACTGCCCGCCTTACTGCCGCCTACCCCGCCCGCCACGCCGCCGTCGATGCCA 641 GCGCTGTCCCCACGGGTACCAGGAAGTGCAGAGCCGCACAGGAGCTGCCCCGGAGCTGAGGGGACGGTCTTCGGCTCCTC 721 TGCACCCCGTGATTCTGCCCACGCTCCTCCACCACGAGGCACTGACCTGCGTCGGGTGGTGACCGTGGCTGGCGGTCACG 801 CCCTCAGCCCCTCCGGGCACACGTGCCGCCTGACCGGGCGACCCTTTTCAGTTCGGCAAACGTCGCTCCCTTCATTTTGG 881 GACTGAGGCTGCAGCATTGGAACAAAAGAGCATTATTTCAATTTTTCTTTCTTTTTTTTTGTTCGTTCATTTAAACGTAT 961 ATTTAGAACTGCACTTTGTCCACAACCTTCCCTTCTCTTTCTATTCCCCAGTGAACTGAGGTTTTTACCGATTTATAGAG 1041 CAGTCAAATCCGAAGTGCTCGAGTGCTTAGAAACCCCCTCTGGTGCTTGGTTGAACAAGGGAATCACAAGAAAACGAAAA 1121 TGCAAAAACTGAACTTCGGGGGTCGTTCTGTGCCTTCCAGCATCTTGTACAGCAAATCCTGACTCGTGTCTTTTTACCCC 1201 CAAGATATCTGTCTTCAGTAGCGACTGAATCTGCCACTCTCAGAATAAGTTCCTTGCATTTATTCCAAATAATCTCGTTT 1281 ACTCTCACCTGTTTATGCAAATTGTATAAGGTTTCTTATGCCCAAGCTTGAAAAATGATTTCCCAGTAGACAAGAGGCGG 1361 CTACCTATCCTACAGTTACGGTATTTATTTACATAAGAAGATCTTACAGGAGTTCTTTGCTTGAATCCGTTCTAACACCC 1441 GCGGCAGCTGCACGCGCTCACAGAAGGTGGAGGTTACTTGCCCAGGTACAGACGACCTCGGGGCAGTGACGAGCAAAGAC 1521 CAGAGACTGCTGAGCCCTCGCATCTGGGTGGCGGAATTGCCTGCGGGGTTTTGCCCTTGGTTTACTGAGGGGGGTCTTGG 1601 TTGCTGCTGAAGCCCCCCACCCCTTCTAAAGTGCAATGCAAAAGGGACATCATGTATATGCAGCGTTTGTTTGGAATTTT 1681 CTTTGCTTTTGTTTTCTTTGCGGTTGTTCTGTGTGCATGGATTCCACACCTCTGCCGTAGGTAGATCCGTCAGCGGGCAT 1761 TATTACCGTGTCTTGTAAAGGGTCGGTTTTGTTATGCAACATGCAGAATGCTGTTTTTAGCCTTGTTTTACCAGAGTTGT 1841 TTTTTTTTTCAGTTATTTCTTCAAGGGAAACTAAATGATTTAGTTGGAGCAAAGCTTTAAGTGTGTTGGCGTGCTTCTGT 1921 GTGGCTGTCCTGTGTCGCCAGGTCGAAGATCACAGTGAGGTAGAGGCCCTGCCCCATCCCCAGGGCCGCCAGGCTTGCTC 2001 CGTTTGCTTTGAGTTTTTAGACCCCAGAGGGAGATGAGCTTTTCCAAGCTGTGTCTGGGCCAGAGCCTCTCCTTGCCCTT 2081 GCTCCATCCCGACGGTCACCGTTGGGTCCACGCCTCCACCGCCCCATCTTGCCCCAAACGGAAAGCGCTGTATCTGCAGT 2161 GGCAGCCCTTCCCCACTTCGGCTCTGGGAGGGTCCAGCCAGTGTCACCTGGGCCCACCCTTTCCTGCAGCTGCCAGGCCC 2241 GTGCGGTCAGTGGGACCCGGACGTGGGCAGGCGAGCTCGGGACCCTCCCAGGCAGTTCCCACAGCTCTTGCCTCGGCTCA 2321 CCAGGGTCACTTCCACTGTCAGGGGCCTGAGGGGGCAGCTGTGGCTGCAGGGCTGCTCTGGACTGAGGGGTCCCAGGCCC 2401 CGAGGGGTGCACGCCTGGCTCCCCTTGGCACAGGTGCGAGTCCGTTTCTTTTCAGCAGAAGGGGGAAGAGGTGTCCGCTG 2481 TGTGGGCTGCTGACTCCTCTGTGTGTGAGGCCCTTCATCTAAGTGATTGTGTATTCAGTTTAATTCTCATTATATTTCTA 2561 TACTGAAAGAAGATTTTTAACGAAGGGAAAAACAACAGCAATAACATTCATATCTCTGGAGCAGCTAACTCATACACGTA 2641 ATGTCTGCTTTTCGTACAGAACTAGCCAATGTAAAAACAGTTCACCTGTAAATACTTTTTCCTTTTTCACCGTTGTATTA 2721 TACATGTATATGCTGGGTCCTTTTTCAGAAACTCTTTTCTTACCTGAGAGTTGTCTTGTTTTCTGGGCTGTTTTTAACTG 2801 AGGAAAAAAAAAATGCTTTCCTGCCGGGGGGCAGGGGAGACGGAGAAACCCATGTGCGTTTCCCATGTGACCCCCTCCTC 2881 CCTGTGGGTCTGAGCCCCGGCCCCCCCCACCTCCTCCTCCCTGTGGGTCCGAACCCCGGCCCCCCCACCCCCTCCTCCCT 2961 GTGGGTCCGAACCCCGGCCCCCCCACCCCCTCCTCCCTGTGGGTCCGATCCCCGGCCCCCCCCACCCCCTCCTCCCTGTG 3041 GGTCCGAACCCCGGCCCCCCCCCCACCCCCTCCTCCCTGTGGGTCCGAACCCCGGCCCCCCCACCCCTCCCTCAGCCCAC 3121 CAGGGTCCAGGGAGATGTTCGTTCTCGCTTTAAGTCAGGAGTCACAAATGACTTTTTTTTTTCAATTAAGGAAAAAGCTC 3201 CATCTCTACCTTTAACATCACCCAGACCCCCGCCCCTGCCCGTGCCCCACGCTGCTGCTAACGACAGTATGATGCTTACT 3281 CTGCTACTCGGAAACTATTTTTATGTAATTAATGTATGCTTTCTTGTTTATAAATGCCTGATTTAAAAAGAAAAGAGCTT 3361 GGCATATTTATCTATTTCGCTGTGTACCTGTTAGTCCTTCCCCGACCCCGAAACAGATGACATTGTACAATAAAGGACTT 3441 TGAGAGGA Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
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miRNA-target interactions (Predicted by miRanda) |
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DRVs in gene 3'UTRs | |||||||||||||||||||||
SNPs in gene 3'UTRs |
Experimental Support 1 for Functional miRNA-Target Interaction | |
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miRNA:Target | ---- |
Validation Method |
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Conditions | HEK293 |
Location of target site | 3'UTR |
Tools used in this research | TargetScan , miRTarCLIP , Piranha |
Original Description (Extracted from the article) |
...
PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection
... - Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell. |
Article |
- Hafner M; Landthaler M; Burger L; Khorshid et al. - Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
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Experimental Support 2 for Functional miRNA-Target Interaction | |||||||
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miRNA:Target | ---- | ||||||
Validation Method |
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Conditions | HEK293 | ||||||
Disease | 6497.0 | ||||||
Location of target site | 3'UTR | ||||||
Tools used in this research | TargetScan , miRTarCLIP , Piranha | ||||||
Original Description (Extracted from the article) |
...
"PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1
... - Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods. |
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miRNA-target interactions (Provided by authors) |
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Article |
- Kishore S; Jaskiewicz L; Burger L; Hausser et al. - Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
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CLIP-seq Support 1 for dataset GSM4903838 | |
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Method / RBP | HITS-CLIP / AGO |
Cell line / Condition | Dermal fibroblasts / 124_TD_21_c |
Location of target site | NM_003036 | 3UTR | CGCCUCCACCGCCCCAUCUUGCCCCAAACGGAAAGCGCUGUAUCUGCAGUGGCAGCCCUUCCCCACUUCGGCUCUGGGAGGGUCCAGCCA |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Accession Series | GSE161239 |
CLIP-seq Viewer | Link |
CLIP-seq Support 2 for dataset GSM545216 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / miR-124 transfection |
Location of target site | ENST00000378536.4 | 3UTR | CCACAACCUUCCCUUCUCUUUCUAUUCCCCAGUGAACUGAGGUUUUUACCGAUUUAUAGAGCAGUCAAAUCC |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 20371350 / GSE21578 |
CLIP-seq Viewer | Link |
CLIP-seq Support 3 for dataset GSM714645 | |
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Method / RBP | PAR-CLIP / AGO2 |
Cell line / Condition | HEK293 / completeT1, repB |
Location of target site | ENST00000378536.4 | 3UTR | UCCACAACCUUCCCUUCUCUUUCUAUUCCCCAG |
Tools used in this analysis | TargetScan, miRTarCLIP, and Piranha |
Article / Accession Series | PMID: 21572407 / GSE28865 |
CLIP-seq Viewer | Link |
MiRNA-Target Expression Profile | |||||||
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MiRNA-Target Expression Profile (TCGA) | |||||||
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181 hsa-miR-4271 Target Genes:
Functional analysis:
ID | Target | Description | Validation methods | |||||||||
Strong evidence | Less strong evidence | |||||||||||
MIRT066209 | MARCH9 | membrane associated ring-CH-type finger 9 | 2 | 2 | ||||||||
MIRT079367 | CCDC137 | coiled-coil domain containing 137 | 2 | 2 | ||||||||
MIRT081183 | MIDN | midnolin | 2 | 4 | ||||||||
MIRT083278 | ZCCHC3 | zinc finger CCHC-type containing 3 | 2 | 6 | ||||||||
MIRT086207 | HOXD13 | homeobox D13 | 2 | 2 | ||||||||
MIRT133713 | SKI | SKI proto-oncogene | 2 | 4 | ||||||||
MIRT150653 | SLC27A1 | solute carrier family 27 member 1 | 2 | 2 | ||||||||
MIRT159166 | NRBP1 | nuclear receptor binding protein 1 | 2 | 2 | ||||||||
MIRT160059 | TET3 | tet methylcytosine dioxygenase 3 | 2 | 4 | ||||||||
MIRT180856 | RPRD2 | regulation of nuclear pre-mRNA domain containing 2 | 2 | 2 | ||||||||
MIRT181931 | MARK2 | microtubule affinity regulating kinase 2 | 2 | 2 | ||||||||
MIRT190628 | BCL2L2-PABPN1 | BCL2L2-PABPN1 readthrough | 2 | 2 | ||||||||
MIRT190654 | PABPN1 | poly(A) binding protein nuclear 1 | 2 | 2 | ||||||||
MIRT196107 | MPRIP | myosin phosphatase Rho interacting protein | 2 | 2 | ||||||||
MIRT263248 | SGPL1 | sphingosine-1-phosphate lyase 1 | 2 | 2 | ||||||||
MIRT321168 | EIF4H | eukaryotic translation initiation factor 4H | 2 | 2 | ||||||||
MIRT338624 | SHMT2 | serine hydroxymethyltransferase 2 | 2 | 2 | ||||||||
MIRT366301 | GDI1 | GDP dissociation inhibitor 1 | 2 | 4 | ||||||||
MIRT375172 | ARIH1 | ariadne RBR E3 ubiquitin protein ligase 1 | 2 | 2 | ||||||||
MIRT441488 | NCEH1 | neutral cholesterol ester hydrolase 1 | 2 | 2 | ||||||||
MIRT442333 | WNT9B | Wnt family member 9B | 2 | 2 | ||||||||
MIRT443889 | CNKSR3 | CNKSR family member 3 | 2 | 2 | ||||||||
MIRT445880 | WBP1L | WW domain binding protein 1 like | 2 | 2 | ||||||||
MIRT449312 | MRO | maestro | 2 | 2 | ||||||||
MIRT449844 | BCL2L13 | BCL2 like 13 | 2 | 2 | ||||||||
MIRT450304 | DRAXIN | dorsal inhibitory axon guidance protein | 2 | 2 | ||||||||
MIRT450515 | EMX1 | empty spiracles homeobox 1 | 2 | 2 | ||||||||
MIRT451243 | ZNF444 | zinc finger protein 444 | 2 | 2 | ||||||||
MIRT451713 | OLR1 | oxidized low density lipoprotein receptor 1 | 2 | 2 | ||||||||
MIRT451792 | TLR5 | toll like receptor 5 | 2 | 2 | ||||||||
MIRT451823 | ALDH3B1 | aldehyde dehydrogenase 3 family member B1 | 2 | 2 | ||||||||
MIRT451906 | ILK | integrin linked kinase | 2 | 2 | ||||||||
MIRT452181 | KIAA1456 | KIAA1456 | 2 | 4 | ||||||||
MIRT452242 | TRAM1 | translocation associated membrane protein 1 | 2 | 2 | ||||||||
MIRT452544 | ZNF467 | zinc finger protein 467 | 2 | 2 | ||||||||
MIRT452605 | REPIN1 | replication initiator 1 | 2 | 2 | ||||||||
MIRT454505 | ZFYVE27 | zinc finger FYVE-type containing 27 | 2 | 2 | ||||||||
MIRT454657 | FBXL18 | F-box and leucine rich repeat protein 18 | 2 | 2 | ||||||||
MIRT455354 | KDM5C | lysine demethylase 5C | 2 | 2 | ||||||||
MIRT455452 | EPB41L4B | erythrocyte membrane protein band 4.1 like 4B | 2 | 2 | ||||||||
MIRT455587 | TAF12 | TATA-box binding protein associated factor 12 | 2 | 2 | ||||||||
MIRT456501 | PFKFB2 | 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 | 2 | 2 | ||||||||
MIRT456815 | PIGP | phosphatidylinositol glycan anchor biosynthesis class P | 2 | 2 | ||||||||
MIRT457425 | NOL10 | nucleolar protein 10 | 2 | 2 | ||||||||
MIRT457468 | SLC35F6 | solute carrier family 35 member F6 | 2 | 2 | ||||||||
MIRT457660 | SERINC1 | serine incorporator 1 | 2 | 2 | ||||||||
MIRT458231 | NXPH3 | neurexophilin 3 | 2 | 2 | ||||||||
MIRT458374 | ITM2C | integral membrane protein 2C | 2 | 2 | ||||||||
MIRT458667 | GPR35 | G protein-coupled receptor 35 | 2 | 2 | ||||||||
MIRT459665 | VPS37C | VPS37C, ESCRT-I subunit | 2 | 2 | ||||||||
MIRT459825 | TPP1 | tripeptidyl peptidase 1 | 2 | 2 | ||||||||
MIRT460564 | FEM1A | fem-1 homolog A | 2 | 2 | ||||||||
MIRT460725 | ASXL3 | additional sex combs like 3, transcriptional regulator | 2 | 2 | ||||||||
MIRT461121 | RAB36 | RAB36, member RAS oncogene family | 2 | 2 | ||||||||
MIRT461529 | C14orf1 | ergosterol biosynthesis 28 homolog | 2 | 2 | ||||||||
MIRT461750 | DDX11 | DEAD/H-box helicase 11 | 2 | 2 | ||||||||
MIRT462570 | STS | steroid sulfatase | 2 | 2 | ||||||||
MIRT462798 | NTN1 | netrin 1 | 2 | 2 | ||||||||
MIRT463030 | ZNF689 | zinc finger protein 689 | 2 | 2 | ||||||||
MIRT463991 | WDTC1 | WD and tetratricopeptide repeats 1 | 2 | 2 | ||||||||
MIRT464684 | UBE2V1 | ubiquitin conjugating enzyme E2 V1 | 2 | 2 | ||||||||
MIRT465439 | TP53 | tumor protein p53 | 2 | 2 | ||||||||
MIRT465512 | PRICKLE4 | prickle planar cell polarity protein 4 | 2 | 2 | ||||||||
MIRT465649 | TNPO2 | transportin 2 | 2 | 10 | ||||||||
MIRT465947 | TMEM189-UBE2V1 | TMEM189-UBE2V1 readthrough | 2 | 2 | ||||||||
MIRT466028 | TMEM189 | transmembrane protein 189 | 2 | 2 | ||||||||
MIRT468076 | SHOC2 | SHOC2, leucine rich repeat scaffold protein | 2 | 6 | ||||||||
MIRT468131 | SH3PXD2A | SH3 and PX domains 2A | 2 | 2 | ||||||||
MIRT468498 | SESN2 | sestrin 2 | 2 | 2 | ||||||||
MIRT468879 | RREB1 | ras responsive element binding protein 1 | 2 | 2 | ||||||||
MIRT469318 | RGP1 | RGP1 homolog, RAB6A GEF complex partner 1 | 2 | 2 | ||||||||
MIRT469558 | RARA | retinoic acid receptor alpha | 2 | 2 | ||||||||
MIRT469793 | RAB15 | RAB15, member RAS oncogene family | 2 | 2 | ||||||||
MIRT469896 | PTRF | caveolae associated protein 1 | 2 | 2 | ||||||||
MIRT470235 | PRRC2A | proline rich coiled-coil 2A | 2 | 2 | ||||||||
MIRT470808 | PLXND1 | plexin D1 | 2 | 2 | ||||||||
MIRT471597 | PAQR5 | progestin and adipoQ receptor family member 5 | 2 | 10 | ||||||||
MIRT471710 | OTUB1 | OTU deubiquitinase, ubiquitin aldehyde binding 1 | 2 | 2 | ||||||||
MIRT471752 | OGT | O-linked N-acetylglucosamine (GlcNAc) transferase | 2 | 2 | ||||||||
MIRT472978 | MRRF | mitochondrial ribosome recycling factor | 2 | 2 | ||||||||
MIRT473538 | MAX | MYC associated factor X | 2 | 2 | ||||||||
MIRT473581 | MAT2A | methionine adenosyltransferase 2A | 2 | 2 | ||||||||
MIRT473970 | LRRC58 | leucine rich repeat containing 58 | 2 | 2 | ||||||||
MIRT474223 | LCOR | ligand dependent nuclear receptor corepressor | 2 | 4 | ||||||||
MIRT474553 | KLHDC3 | kelch domain containing 3 | 2 | 2 | ||||||||
MIRT474777 | KIAA0895L | KIAA0895 like | 2 | 2 | ||||||||
MIRT476042 | GRSF1 | G-rich RNA sequence binding factor 1 | 2 | 2 | ||||||||
MIRT476438 | GBA2 | glucosylceramidase beta 2 | 2 | 2 | ||||||||
MIRT477773 | E2F3 | E2F transcription factor 3 | 2 | 4 | ||||||||
MIRT477946 | DPM2 | dolichyl-phosphate mannosyltransferase subunit 2, regulatory | 2 | 2 | ||||||||
MIRT478782 | CRTC2 | CREB regulated transcription coactivator 2 | 2 | 2 | ||||||||
MIRT479320 | VPS72 | vacuolar protein sorting 72 homolog | 2 | 2 | ||||||||
MIRT480405 | C19orf47 | chromosome 19 open reading frame 47 | 2 | 2 | ||||||||
MIRT480593 | BTRC | beta-transducin repeat containing E3 ubiquitin protein ligase | 2 | 2 | ||||||||
MIRT480963 | BBC3 | BCL2 binding component 3 | 2 | 2 | ||||||||
MIRT481127 | AZIN1 | antizyme inhibitor 1 | 2 | 4 | ||||||||
MIRT481444 | ARRB2 | arrestin beta 2 | 2 | 2 | ||||||||
MIRT481687 | AR | androgen receptor | 2 | 2 | ||||||||
MIRT481730 | APH1A | aph-1 homolog A, gamma-secretase subunit | 2 | 2 | ||||||||
MIRT482386 | AEN | apoptosis enhancing nuclease | 2 | 2 | ||||||||
MIRT482564 | ABHD2 | abhydrolase domain containing 2 | 2 | 2 | ||||||||
MIRT482605 | ABHD14B | abhydrolase domain containing 14B | 2 | 2 | ||||||||
MIRT483256 | CITED4 | Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 | 2 | 4 | ||||||||
MIRT483531 | TAGLN2 | transgelin 2 | 2 | 2 | ||||||||
MIRT483840 | UNC5B | unc-5 netrin receptor B | 2 | 4 | ||||||||
MIRT483935 | LENG8 | leukocyte receptor cluster member 8 | 2 | 4 | ||||||||
MIRT484414 | SNX19 | sorting nexin 19 | 2 | 2 | ||||||||
MIRT484487 | SLC9A1 | solute carrier family 9 member A1 | 2 | 2 | ||||||||
MIRT484609 | SIX3 | SIX homeobox 3 | 2 | 6 | ||||||||
MIRT484703 | RNF11 | ring finger protein 11 | 2 | 2 | ||||||||
MIRT485244 | POGZ | pogo transposable element derived with ZNF domain | 2 | 2 | ||||||||
MIRT485607 | FOSL1 | FOS like 1, AP-1 transcription factor subunit | 2 | 4 | ||||||||
MIRT485965 | RTBDN | retbindin | 2 | 2 | ||||||||
MIRT487308 | GLTSCR1 | BRD4 interacting chromatin remodeling complex associated protein | 2 | 2 | ||||||||
MIRT487329 | SREBF1 | sterol regulatory element binding transcription factor 1 | 2 | 4 | ||||||||
MIRT487410 | CACNB1 | calcium voltage-gated channel auxiliary subunit beta 1 | 2 | 2 | ||||||||
MIRT487607 | C20orf96 | chromosome 20 open reading frame 96 | 2 | 2 | ||||||||
MIRT487689 | CDK14 | cyclin dependent kinase 14 | 2 | 2 | ||||||||
MIRT487787 | GPR20 | G protein-coupled receptor 20 | 2 | 4 | ||||||||
MIRT488026 | ADO | 2-aminoethanethiol dioxygenase | 2 | 2 | ||||||||
MIRT488476 | B3GALNT2 | beta-1,3-N-acetylgalactosaminyltransferase 2 | 2 | 2 | ||||||||
MIRT488761 | FXYD1 | FXYD domain containing ion transport regulator 1 | 2 | 2 | ||||||||
MIRT489161 | MRPL12 | mitochondrial ribosomal protein L12 | 2 | 4 | ||||||||
MIRT489529 | MRE11A | MRE11 homolog, double strand break repair nuclease | 2 | 8 | ||||||||
MIRT489774 | GRINA | glutamate ionotropic receptor NMDA type subunit associated protein 1 | 2 | 2 | ||||||||
MIRT489878 | MPLKIP | M-phase specific PLK1 interacting protein | 2 | 2 | ||||||||
MIRT490094 | FN3K | fructosamine 3 kinase | 2 | 2 | ||||||||
MIRT490202 | PKNOX2 | PBX/knotted 1 homeobox 2 | 2 | 2 | ||||||||
MIRT490283 | ISL2 | ISL LIM homeobox 2 | 2 | 2 | ||||||||
MIRT490377 | LHFPL3 | LHFPL tetraspan subfamily member 3 | 2 | 2 | ||||||||
MIRT491035 | ALPK3 | alpha kinase 3 | 2 | 2 | ||||||||
MIRT491186 | JUND | JunD proto-oncogene, AP-1 transcription factor subunit | 2 | 4 | ||||||||
MIRT491766 | ZNF385A | zinc finger protein 385A | 2 | 2 | ||||||||
MIRT491888 | YWHAE | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon | 2 | 2 | ||||||||
MIRT491981 | UNK | unkempt family zinc finger | 2 | 2 | ||||||||
MIRT492400 | SDK1 | sidekick cell adhesion molecule 1 | 2 | 2 | ||||||||
MIRT493647 | HDLBP | high density lipoprotein binding protein | 2 | 2 | ||||||||
MIRT494010 | DUSP9 | dual specificity phosphatase 9 | 2 | 2 | ||||||||
MIRT494167 | CNOT6L | CCR4-NOT transcription complex subunit 6 like | 2 | 2 | ||||||||
MIRT495712 | PADI1 | peptidyl arginine deiminase 1 | 2 | 2 | ||||||||
MIRT496873 | AHCYL2 | adenosylhomocysteinase like 2 | 2 | 2 | ||||||||
MIRT499175 | RBPJL | recombination signal binding protein for immunoglobulin kappa J region like | 2 | 2 | ||||||||
MIRT501652 | PHLDA3 | pleckstrin homology like domain family A member 3 | 2 | 2 | ||||||||
MIRT506645 | MAPK1 | mitogen-activated protein kinase 1 | 2 | 4 | ||||||||
MIRT510590 | TUBB2A | tubulin beta 2A class IIa | 2 | 6 | ||||||||
MIRT511907 | FKBP1A | FK506 binding protein 1A | 2 | 2 | ||||||||
MIRT513063 | ANKRD45 | ankyrin repeat domain 45 | 2 | 2 | ||||||||
MIRT513104 | DYNAP | dynactin associated protein | 2 | 2 | ||||||||
MIRT521804 | POM121C | POM121 transmembrane nucleoporin C | 2 | 2 | ||||||||
MIRT523520 | GLUL | glutamate-ammonia ligase | 2 | 2 | ||||||||
MIRT525085 | FRK | fyn related Src family tyrosine kinase | 2 | 2 | ||||||||
MIRT530930 | SCIN | scinderin | 2 | 2 | ||||||||
MIRT533501 | TRIM71 | tripartite motif containing 71 | 2 | 2 | ||||||||
MIRT538560 | CECR2 | CECR2, histone acetyl-lysine reader | 2 | 2 | ||||||||
MIRT544556 | CSNK2A1 | casein kinase 2 alpha 1 | 2 | 2 | ||||||||
MIRT555912 | ORMDL3 | ORMDL sphingolipid biosynthesis regulator 3 | 2 | 2 | ||||||||
MIRT560405 | TMEM69 | transmembrane protein 69 | 2 | 2 | ||||||||
MIRT560664 | RTN3 | reticulon 3 | 2 | 2 | ||||||||
MIRT564061 | CDT1 | chromatin licensing and DNA replication factor 1 | 2 | 2 | ||||||||
MIRT565504 | SP1 | Sp1 transcription factor | 2 | 2 | ||||||||
MIRT570014 | COL1A2 | collagen type I alpha 2 chain | 2 | 2 | ||||||||
MIRT572321 | HSPB6 | heat shock protein family B (small) member 6 | 2 | 2 | ||||||||
MIRT573229 | TRIM21 | tripartite motif containing 21 | 2 | 2 | ||||||||
MIRT573487 | IQSEC3 | IQ motif and Sec7 domain 3 | 2 | 2 | ||||||||
MIRT574137 | MARVELD1 | MARVEL domain containing 1 | 2 | 2 | ||||||||
MIRT574323 | ZNF703 | zinc finger protein 703 | 2 | 2 | ||||||||
MIRT620939 | OSMR | oncostatin M receptor | 2 | 2 | ||||||||
MIRT650080 | MTL5 | testis expressed metallothionein like protein | 2 | 2 | ||||||||
MIRT684553 | ZNF708 | zinc finger protein 708 | 2 | 2 | ||||||||
MIRT685841 | ANGEL1 | angel homolog 1 | 2 | 2 | ||||||||
MIRT688551 | DCAF16 | DDB1 and CUL4 associated factor 16 | 2 | 2 | ||||||||
MIRT701985 | MIER3 | MIER family member 3 | 2 | 2 | ||||||||
MIRT703899 | EPT1 | selenoprotein I | 2 | 2 | ||||||||
MIRT706388 | MC2R | melanocortin 2 receptor | 2 | 2 | ||||||||
MIRT707487 | UGT2B4 | UDP glucuronosyltransferase family 2 member B4 | 2 | 2 | ||||||||
MIRT711885 | INSIG2 | insulin induced gene 2 | 2 | 2 | ||||||||
MIRT719164 | KIF6 | kinesin family member 6 | 2 | 2 | ||||||||
MIRT721294 | C3orf36 | chromosome 3 open reading frame 36 | 2 | 2 | ||||||||
MIRT721775 | ARL6IP4 | ADP ribosylation factor like GTPase 6 interacting protein 4 | 2 | 2 | ||||||||
MIRT723763 | NKIRAS2 | NFKB inhibitor interacting Ras like 2 | 2 | 2 | ||||||||
MIRT725485 | GPR26 | G protein-coupled receptor 26 | 2 | 2 |
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