miRTarBase - #MIRT140170


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pre-miRNA Information
pre-miRNA hsa-mir-4796   
Genomic Coordinates chr3: 114743445 - 114743525
Description Homo sapiens miR-4796 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4796-3p
Sequence 53| UAAAGUGGCAGAGUAUAGACAC |74
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN9734363 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1045223845 8 dbSNP
rs185555286 18 dbSNP
Putative Targets

Gene Information
Gene Symbol SPRED1   
Synonyms NFLS, PPP1R147, hSpred1, spred-1
Description sprouty related EVH1 domain containing 1
Transcript NM_152594   
Expression
Putative miRNA Targets on SPRED1
3'UTR of SPRED1
(miRNA target sites are highlighted)		 
>SPRED1|NM_152594|3'UTR
   1 AATGGTCCAGTGCCAAAATGAGCTTAAAATCTTTGTTTCCAGGAATTAGCTAACTTGGATTTGTGGAAGCTTTTGGCAAG
  81 CAATATGGAATCTTGCCTGGTATCATTGAGCCCACACATGGAGGAAGCAGAACTCATCAGTTCTTGGCGTTTCACGCCAT
 161 GCCTAACTTTTCCCTTGAGTGCATGGCATGTTTTGTTACAGGTTGTAGAGTATTTGCAGAAGGAAACCATTTCTGGTTAT
 241 TTGGCTATAAAAAGTCAGCATAAAATATGATCCAACTAAAAGGGATTAATTTTTGGCATTTTTGTATATTTATGCATTAG
 321 GTGATGGGACTTTTAAAGGTTTGAATTTATTAGGACACGAACTAAAAATAAAAGTGCACTAGGGGACAGTTGATTTCAAT
 401 CTAAGAAAAGTTAACACTTGGGAATTACAAGAAGTAAAACAAGTGCAACTAAATCATTTATTAGTTGTTTTTTGAAAGCA
 481 GTTTTATGTATAAATAACAAATGTTTATATTTAACTAAATGTAAGGTACGAATTATTACATATTAAACTTTTCTTCCCCT
 561 TCCTAGTTCTGAAGTAGATATATATATATATATATCTACTGTCACATTCCATATATTTTGAATATTTAACTCATCTAGTT
 641 AATAATGTTTTTATTCCATGCGAATGATTTGATATTTTCATCCTTATTTCTCTTTGGCTACAATTTATATTGAGTTATAT
 721 CTGTACATTCTGGTAATCTAAAATCCTTAAAAATACTCTAATAGCCTTGAGTGACCAACTTTTTTTTTAAAGCACAGATG
 801 TAATTGTCTAATGTTCTGATGGGAACGTAACACTTATTTTTATATAAAAAGAGACTGAGTAAACAAACATTATAGAAAAA
 881 AAGTGAAGTTTTTTAGTTGTTTTTTGTGGTATTCAACCAGCAAGTTGTTTTCTTTCAGAGTTTCCTCCTTCAAAAAGTTA
 961 TATTGCATTTACAAATGTTTTACAAGGCAGAAAGTTTGACTGGATAGTTAGTGTAAAAGCTTCATGTTGAGATCTTCACG
1041 TATCATTCTGCTAAACCAGAATATGTTCAGCTGTGTTACTAATTTTTCAGCTTAATCCTCAGTGCTTATTATTTACATAA
1121 CAATAACTTTTTATCAGTTACATTTTATTTTTATTTAAACTGGCCAAAAGCAAAATTATTTTATGTTAAAATGTGTGCTA
1201 AACTATCCCAGGAAAGTATTTAATCCAACATTGTAAATGAAGTATCTTGTACATATAAATTTATTTCTTTTGCAGAGCAT
1281 TATATTACTGGATGTTTAATTTACAAAATAGTTGGGTAAATGTTCCAACAAACTTTAAAGTACCTTGAAGTCAAATTGTC
1361 TGTTTTTGTTTTGTTGTTGTTGTTGTTGTTTTCTTAAGTGTTACATTAAAACTCTAACCAAGGAAAGGGTTCTTTAAGAA
1441 CATTCCCTTAGAGGGATAAAGTTGAGAAGTGTGCCTTTTTTTTAATGGCTTGAAGTTTCAGAGGTGATAAAAATTAAAAT
1521 CACACTACTATTTGAAGCTCATTTTCTATGCAGGTTTTTAAACGTCATTTATGTATCATTCTTTTTATATATCACACTTA
1601 AGCTTGTGTTAGCTTTTTTCTTTTGCCCCAGATCAAACTGAACAATGTATATAACACTATCTGTCTGTAAAATACTTTTT
1681 TTAAGAAAGCATTTATATTTATATGACAGCTTGAACTGACAACATTGTGTATATAGATCATCTTGAAGTATTATTTCACA
1761 TTGAAAAGAAGAAAATATATTGATAACTATAGATGTTATGAAGAAGAGGGTATTTCTAGTTTTGTACTAAAAATCAATTG
1841 GATGAACTAAATCCAAAACATGACACTGTAGGCAGCAGTTTTAAGTCTTATTTTTACTGTTTATATATTTGAATGCTGCT
1921 ACAACAGATGATCTTCATCCCTGAAGTTTTCAGCTAAACTTGGTTTCCTAGAATAGACTGTTAACTTTCAAAATTTTTAT
2001 TGGTGAAATGGAAATACTGTTTTTCCTTGTGAATGAATTTTCATATTTGTAAGTGCTAAGTTTATAATTCAGGTTTGATC
2081 AAGGTGTGAATAACTGAAGAAAATAACTTGCTGGCTATATAGGAAAATGCTGTGGAAATGAACTGTGTATATACTTCTGG
2161 GAGGAACAAATTTAATCATTTCTTCTGTTAAGCACTAATCAGTATAGTGCAACTCCTGGTTCTGTACTGTATTTTATATG
2241 CAACATATATGCTTTAATATTTTAATGTTTGTGCATTAATATTTTCAATTTGTTTAACCACTTTGCTGCTAAGATTTTGC
2321 CGTCCCATTCCCATTTTTTCCTTTACAATTTTAAACAAGTTTCTTCATTAAAAACTATGGTGATGAAATGGTTTTTATTT
2401 TACCTTGGATCTTTATAGTTAACATACCCAGTTTCTTAATCAGTCTACAAGACTAACTGATGATATAATGTTCTCTGAAT
2481 CCCTATATGGAAATTTTCTTTTGAGTAAATGAGAATTCCTTTGTGAAAGCAAATGGGTAGTTTAAATCACTGATTCTTAA
2561 ACATGTGTATAGGCACCTTCAGGAACATTTTCTCATTCTCTGTACAGATTCGGCACTGCCAATTGGCTTTTCCTCTAAAA
2641 CTTTTCTTTGTTTTTATCTGATATAAGCAGATGGCTCAAGACAACTGCTTGAGTAATAGTATTGAAAATGGAATCATCTA
2721 GACGGCATGACAAGCAAGACTGGTCTGATGAACTTGTTCAGAATTGATAATTCTTAAATATTTCTCTTGGCTTCAAAAGG
2801 GACATCATTTGATTTCTGAAGAAGTATGTCGTGTGGAGCTTCAGCACCACCTACTGGATGATTTCCAGGCCAGAGACATG
2881 AGATGGCAATAGGGATCTGACAGGGTTCATCACTACTACCATTAAAGGGCTATTTATGTGGTGACCACCTCTACCAGGGA
2961 AACCAGGAATAAGAACTGTCTCAAAGGAATTGTAAAATGGTTATTTACCTAATGTGTCTTGTTGGCTTGCTGAAAGATTT
3041 TAAGCACTTTTTTCTTACATATCCTGTTTTAAAATATTTGTTGATATTTGGGACTGGCAATCAAACTTAATGGATGTACT
3121 GAGGCATTTATAGAACCAGTTGCTTTAACTCTCAAAAGCCATTACCAAAATGGTATTTTTTTCCTCCTTCCGCCAGTCAG
3201 GGAGAATTTTTAAAAATAATAATCAAAACATGAAAAAACATAATCACACCTGTATTTTATCATGACAGCTTCAGAGAGTG
3281 TGTGTGTACGTTTTTCTCTCTTTTATTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCGATCTC
3361 AGCTCACTGCAACCTCCGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCACCC
3441 ACCACCATGCCCAGCTAAGTTTTGGTATTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTG
3521 ACCTTAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCTACTGCGCCCAGCCGTGTGTATG
3601 TTTCTGAAATGATGATGGGGTGGGGTTAAAATCTAAAGGGAAAAACTTGAAACTACCTATTTTCATTGGTTATTCAGCAG
3681 TGCCTAAAATGAGCTTTTGAAGTAATGTAAATGCACTTTCAATTCATGTGTATAGTGCCATCTGATATCTTGGGTAAGTC
3761 TTGCTTTTTCTTTTCTTTTTCCTCTCCCCTGCCCCCTTAATTAAATGGCACGGAAATGTTTCTTAATATGCACGTGAGTC
3841 TCCAGAGTACAGGAAATGTGCTTTCCTCTAAATGGTCAATGTAAAGAATCTTAAGGATATTTCTTGTGTTGAAATTTACA
3921 TTCGATTTTGTGATTACACTTGGAAGTATGTGTTAAATTGGGTTTTTAATTGTAGCCCAAAGGTGCATTAAGCAAGTGTA
4001 ACATTTTTTCCACATAAAACTTAGAAAACTTTAGTTACCTGAAAAGCAAGGATTCTTTACTAATTATTATGCTCATTCTT
4081 GATTTGACTTCCATGTTCACACTTCAAAGTGTAAGAGGAAGCACTAGAAACTGGCATTATTGTTGCACTAAAAAAGTCTA
4161 TAAATCATAATAGCACCATGAGGTGTTTTGCAATGAGACAAACATGAAGAATGAATTTCTTTAAGAGAGAAACACAACCG
4241 GAGGTGATTTATATAAACCAAAAGAAAAAAAAAGGCTTTAAGGTATTAGGTACTGTTTGCCTAGCAGCCAGGTGGTTATA
4321 AAAGATTCATATGCTTTGGTACACTGATAAATGTTAGCCATTATTCCTGAAAGCTTCTTAAATTGCATCAGTTGTTTTGA
4401 AATTTTTTCAAGAATAAACTAGTTGAAAAGTCTTTGTATTAAAAATACACATAGATTTTTGTGAACATTTCCAGTGTGTA
4481 GTGTCGTTTGCTTTCTATTTCTGACCTCAAAAGTGCCTCACTTGTATATTATTTCCATTAAAAGCTTGACTGCATTCTTT
4561 CTAATGAACAATGAAAAACTGTTTAACTCATGTCATAATGTGTCTCCTCAGATATAGTTAACTAGCTTGATAGTTTTGAG
4641 TATATAATGTAAATAATACATTATAAGTTTGTAACCATTTCTGTTACTTCATACCCGTGTAATTGGACATAGCAGATGAT
4721 TATCATAAGAATTTGTTTTAATGGTTTTTTTCCCTCCTGGAATTACCTGATTAAACCTGTCATGAATTATAAAAGGACTT
4801 TTTCTTATTCTCCTAGAGCTTATCAAATTATCACATAAGAGATAATTACTGGAGGAGAAAGTAAAAATGGAAGCTTTTGA
4881 TAATTAGCTCTGTTCTTTAAAAGTATACTTTTAAACTGAAAGTTCACATATAGTTCATCTTAATAACATATTTATTCATC
4961 CTTAATTGTATTCAGATTTTTTTTTAAGTCTCTAAGCTAATAATGTTATATTTATTGGTTTGGTAACATGTTGCAGCTAA
5041 GCTAATGACCTTAAGTGGCAATTGTTTAACCCAGGACTACTGATTTTTTTATATTCAAGTCAGTTTCATCGTTTTACTTA
5121 ACTCGCCATATAACCAAAAATAACGAATAATCTAAAGGAAAGGTTATTAGGACAGTAATAAAAAATTATAGTGTATCTCA
5201 ACACTAGAATAAGTTGGATTACTATATTATAGTTTATTTGAAAAATCAAGGAGTAACTGTATCTTTACCATTAATTATGA
5281 AATGTAGTCTCATGTGCTTATTTACAGGTTTTTCAGAATTTGCTTTACATTCTTCACATCAAGTTAATACCCACAAGTAA
5361 GTAGAATAGCTTTTATAACAAGGAAATTGAAACTAGGGTTCTAGCTTGGCTATCAATATAAGTGTCATGCACATAGTGCT
5441 CCTTAAAGAAAAAGACATCGACATCAATGGTATGAAAGCTGTAGTCACTCTTTAAATTGAACTGCTCTAAGATTTGCAGT
5521 TTTAGTGAGATCTGAAATGATGGTTCAAAAAATACATTCATAATAAAAGTCTTAACAAAATCACA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cacagAUAUGAGACGGUGAAAu 5'
               | |::|:  ||||||| 
Target 5' ttcaaTTTGTTTAACCACTTTg 3'
 2284 - 2305 149.00 -9.60
2 
miRNA  3' caCAGAUAUGAGACGGUGAAAu 5'
            |||   |:||  |||:||| 
Target 5' ccGTC-CCATTC--CCATTTTt 3'
 2320 - 2338 131.00 -8.00
3 
miRNA  3' cacAGAUAU-GA-GACGGUGAAAu 5'
             | |||| || |||:||| || 
Target 5' ataTATATATCTACTGTCACATTc 3'
 586 - 609 123.00 -9.66
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
886134 106 ClinVar
315739 150 ClinVar
315740 249 ClinVar
315741 257 ClinVar
887144 384 ClinVar
315742 428 ClinVar
315743 566 ClinVar
315744 578 ClinVar
315745 578 ClinVar
315746 578 ClinVar
315747 578 ClinVar
887145 582 ClinVar
887146 633 ClinVar
887147 634 ClinVar
315748 811 ClinVar
888404 937 ClinVar
315749 1041 ClinVar
888405 1096 ClinVar
315750 1338 ClinVar
315751 1401 ClinVar
315752 1564 ClinVar
315753 1657 ClinVar
315754 1725 ClinVar
888406 1728 ClinVar
315755 1748 ClinVar
315756 1799 ClinVar
885295 1834 ClinVar
315757 1898 ClinVar
885296 1968 ClinVar
885297 2019 ClinVar
885298 2118 ClinVar
885299 2248 ClinVar
885300 2252 ClinVar
886200 2324 ClinVar
315758 2360 ClinVar
886201 2399 ClinVar
315759 2412 ClinVar
886202 2421 ClinVar
886203 2423 ClinVar
886204 2445 ClinVar
315760 2502 ClinVar
886205 2540 ClinVar
315761 2571 ClinVar
887204 2612 ClinVar
887205 2743 ClinVar
315762 2832 ClinVar
315763 2844 ClinVar
887206 2854 ClinVar
315764 2886 ClinVar
887207 2991 ClinVar
315765 3058 ClinVar
315766 3193 ClinVar
888459 3290 ClinVar
888460 3324 ClinVar
888461 3341 ClinVar
888462 3396 ClinVar
315767 3522 ClinVar
888463 3537 ClinVar
888464 3544 ClinVar
315768 3545 ClinVar
884236 3562 ClinVar
315769 3585 ClinVar
315770 3592 ClinVar
315771 3624 ClinVar
315772 3648 ClinVar
884237 3658 ClinVar
884238 3660 ClinVar
315773 3699 ClinVar
886266 3702 ClinVar
886267 3706 ClinVar
886268 3746 ClinVar
315774 3831 ClinVar
315775 3947 ClinVar
315776 3997 ClinVar
315777 4047 ClinVar
315778 4136 ClinVar
887264 4305 ClinVar
887265 4373 ClinVar
887266 4472 ClinVar
315779 4473 ClinVar
315780 4663 ClinVar
887267 4698 ClinVar
315781 4726 ClinVar
315782 4745 ClinVar
315783 4782 ClinVar
315784 4823 ClinVar
315785 4933 ClinVar
315786 4948 ClinVar
315787 4988 ClinVar
315788 5084 ClinVar
315789 5111 ClinVar
315790 5203 ClinVar
315791 5233 ClinVar
888520 5264 ClinVar
315792 5347 ClinVar
884303 5399 ClinVar
884304 5419 ClinVar
884305 5441 ClinVar
884306 5450 ClinVar
884307 5541 ClinVar
COSN217001 32 COSMIC
COSN27139854 49 COSMIC
COSN26679036 50 COSMIC
COSN30175335 200 COSMIC
COSN31535740 289 COSMIC
COSN31536599 360 COSMIC
COSN31515743 461 COSMIC
COSN26465462 491 COSMIC
COSN24305312 530 COSMIC
COSN24872835 595 COSMIC
COSN27374601 596 COSMIC
COSN29299507 624 COSMIC
COSN8743435 713 COSMIC
COSN29598982 789 COSMIC
COSN26507922 790 COSMIC
COSN26601526 858 COSMIC
COSN31490218 858 COSMIC
COSN31520031 876 COSMIC
COSN31584001 883 COSMIC
COSN31595420 1371 COSMIC
COSN31576913 1484 COSMIC
COSN14457008 1506 COSMIC
COSN31556496 1527 COSMIC
COSN31606805 1605 COSMIC
COSN25135459 1626 COSMIC
COSN20111924 1660 COSMIC
COSN30169844 1662 COSMIC
COSN24305313 1717 COSMIC
COSN31521964 1869 COSMIC
COSN30171151 1934 COSMIC
COSN30173543 1980 COSMIC
COSN27014749 2043 COSMIC
COSN31570472 2112 COSMIC
COSN8743436 2176 COSMIC
COSN31584319 2186 COSMIC
COSN31516627 2362 COSMIC
COSN7044448 2404 COSMIC
COSN5396878 2415 COSMIC
COSN25257223 2468 COSMIC
COSN31544180 2484 COSMIC
COSN6272196 2557 COSMIC
COSN7044449 2593 COSMIC
COSN9090387 2745 COSMIC
COSN21376590 3033 COSMIC
COSN6272197 3460 COSMIC
COSN27711114 3812 COSMIC
COSN19457669 3815 COSMIC
COSN5396879 3950 COSMIC
COSN27460122 4077 COSMIC
COSN9624469 4135 COSMIC
COSN18834200 4176 COSMIC
COSN18834201 4177 COSMIC
COSN29755844 4274 COSMIC
COSN14542288 4340 COSMIC
COSN16040666 4933 COSMIC
COSN22614218 5107 COSMIC
COSN1176292 5108 COSMIC
COSN16439736 5363 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs769445247 3 dbSNP
rs1290157571 6 dbSNP
rs1267207801 10 dbSNP
rs1379934822 12 dbSNP
rs891077662 22 dbSNP
rs1451167547 30 dbSNP
rs973368328 31 dbSNP
rs1314974043 32 dbSNP
rs772254530 34 dbSNP
rs1230410923 35 dbSNP
rs1282570677 37 dbSNP
rs1387170993 46 dbSNP
rs772560499 48 dbSNP
rs373694127 49 dbSNP
rs1343759278 64 dbSNP
rs544137820 65 dbSNP
rs533114849 67 dbSNP
rs1171662592 71 dbSNP
rs1025945380 76 dbSNP
rs773453342 82 dbSNP
rs1198646277 84 dbSNP
rs1009278466 87 dbSNP
rs1020286096 95 dbSNP
rs1464262550 96 dbSNP
rs954339455 101 dbSNP
rs1442935138 102 dbSNP
rs1461850065 104 dbSNP
rs545295358 106 dbSNP
rs910296382 121 dbSNP
rs1341820535 123 dbSNP
rs1270979927 129 dbSNP
rs943227853 132 dbSNP
rs1228147902 134 dbSNP
rs1363388444 139 dbSNP
rs770816015 144 dbSNP
rs1339306544 148 dbSNP
rs1033084809 149 dbSNP
rs776485386 150 dbSNP
rs1449069861 156 dbSNP
rs1412257141 157 dbSNP
rs1398254019 164 dbSNP
rs934606444 166 dbSNP
rs192826011 169 dbSNP
rs765093939 174 dbSNP
rs1388044666 183 dbSNP
rs530541798 184 dbSNP
rs1185367581 187 dbSNP
rs1052988828 190 dbSNP
rs377091058 191 dbSNP
rs1208184592 196 dbSNP
rs567404158 206 dbSNP
rs982818134 212 dbSNP
rs1044533508 223 dbSNP
rs377201217 227 dbSNP
rs1204655035 230 dbSNP
rs1172082744 243 dbSNP
rs908220961 248 dbSNP
rs16966842 249 dbSNP
rs1006156390 250 dbSNP
rs547722924 251 dbSNP
rs1445191499 253 dbSNP
rs145373657 257 dbSNP
rs1308289840 259 dbSNP
rs539607759 266 dbSNP
rs994432500 282 dbSNP
rs1368288607 286 dbSNP
rs1029867136 294 dbSNP
rs1405729981 299 dbSNP
rs1413001423 308 dbSNP
rs1179980922 309 dbSNP
rs1471219280 316 dbSNP
rs1252569499 317 dbSNP
rs1181526429 321 dbSNP
rs137920898 322 dbSNP
rs1294213659 324 dbSNP
rs1297950866 335 dbSNP
rs1223762726 339 dbSNP
rs1321438596 340 dbSNP
rs1366932145 345 dbSNP
rs954413934 347 dbSNP
rs932465161 355 dbSNP
rs569990101 359 dbSNP
rs537079236 360 dbSNP
rs751117768 361 dbSNP
rs1411691018 372 dbSNP
rs1436940100 379 dbSNP
rs1464330719 380 dbSNP
rs1349053245 381 dbSNP
rs13329392 383 dbSNP
rs1162626226 391 dbSNP
rs555317480 392 dbSNP
rs1402428303 396 dbSNP
rs1412582437 400 dbSNP
rs1158610522 422 dbSNP
rs185290497 428 dbSNP
rs964513292 437 dbSNP
rs1191920562 441 dbSNP
rs903176348 441 dbSNP
rs1250073297 443 dbSNP
rs1488376043 445 dbSNP
rs577788958 446 dbSNP
rs978888261 450 dbSNP
rs1330470239 452 dbSNP
rs545070531 456 dbSNP
rs925815971 456 dbSNP
rs1227264419 459 dbSNP
rs956024650 460 dbSNP
rs1284842629 461 dbSNP
rs1219400879 468 dbSNP
rs1000175547 470 dbSNP
rs1291612525 489 dbSNP
rs1432632533 493 dbSNP
rs1389362879 499 dbSNP
rs988764254 508 dbSNP
rs1455715538 527 dbSNP
rs1198203130 529 dbSNP
rs756612869 531 dbSNP
rs370660664 536 dbSNP
rs1033052429 541 dbSNP
rs958818241 548 dbSNP
rs1423284542 549 dbSNP
rs1188724149 550 dbSNP
rs1465586550 551 dbSNP
rs950058972 553 dbSNP
rs1207345399 558 dbSNP
rs1044397692 559 dbSNP
rs1257298625 561 dbSNP
rs373626511 565 dbSNP
rs866578422 566 dbSNP
rs1024481332 567 dbSNP
rs1458040449 571 dbSNP
rs1365570456 575 dbSNP
rs1051319633 578 dbSNP
rs1172722142 578 dbSNP
rs147547509 578 dbSNP
rs759359048 578 dbSNP
rs886051106 578 dbSNP
rs886051107 578 dbSNP
rs897360779 578 dbSNP
rs1187045255 580 dbSNP
rs541503324 582 dbSNP
rs1200594670 583 dbSNP
rs1482612300 584 dbSNP
rs1253887837 591 dbSNP
rs553150319 591 dbSNP
rs1017239724 592 dbSNP
rs754213247 593 dbSNP
rs577769507 595 dbSNP
rs868736403 600 dbSNP
rs1033171100 627 dbSNP
rs1395533349 631 dbSNP
rs118146919 634 dbSNP
rs1331224212 640 dbSNP
rs973767543 662 dbSNP
rs374443282 663 dbSNP
rs755236404 666 dbSNP
rs1286445540 668 dbSNP
rs1370154001 674 dbSNP
rs1328413510 677 dbSNP
rs1228712034 682 dbSNP
rs1167176038 683 dbSNP
rs932391787 691 dbSNP
rs1051348461 701 dbSNP
rs917195044 702 dbSNP
rs1487600247 704 dbSNP
rs912409009 710 dbSNP
rs945228676 718 dbSNP
rs563589753 720 dbSNP
rs1253401776 725 dbSNP
rs188754645 737 dbSNP
rs1042288157 745 dbSNP
rs903817354 747 dbSNP
rs1268140597 751 dbSNP
rs1273454492 756 dbSNP
rs530810790 757 dbSNP
rs560005063 759 dbSNP
rs927320048 759 dbSNP
rs941356063 763 dbSNP
rs1319835100 767 dbSNP
rs1290340765 769 dbSNP
rs1410511361 774 dbSNP
rs1038488572 779 dbSNP
rs1306349381 780 dbSNP
rs1388892457 782 dbSNP
rs770577944 784 dbSNP
rs1054394753 791 dbSNP
rs1163211792 794 dbSNP
rs1456883948 795 dbSNP
rs918655129 805 dbSNP
rs886051108 811 dbSNP
rs1180123481 823 dbSNP
rs894527836 827 dbSNP
rs1013023737 828 dbSNP
rs1179523200 836 dbSNP
rs192636064 837 dbSNP
rs1473221063 838 dbSNP
rs1161763230 839 dbSNP
rs1367133408 845 dbSNP
rs1267861459 856 dbSNP
rs1208991104 857 dbSNP
rs1456030483 859 dbSNP
rs1051224906 861 dbSNP
rs891267186 868 dbSNP
rs541409661 869 dbSNP
rs1286718926 873 dbSNP
rs1235627769 876 dbSNP
rs1040319006 877 dbSNP
rs1385447712 883 dbSNP
rs542673653 894 dbSNP
rs900202267 900 dbSNP
rs560864932 901 dbSNP
rs1321739195 910 dbSNP
rs1305646512 911 dbSNP
rs1457312251 917 dbSNP
rs1024865726 925 dbSNP
rs183715838 944 dbSNP
rs1156290921 945 dbSNP
rs971577004 954 dbSNP
rs1478831338 955 dbSNP
rs1377842526 956 dbSNP
rs1000259834 961 dbSNP
rs1032790865 962 dbSNP
rs1249825036 966 dbSNP
rs955756455 975 dbSNP
rs1004812623 1000 dbSNP
rs1308853529 1008 dbSNP
rs1266367570 1033 dbSNP
rs1202216963 1038 dbSNP
rs1346061720 1040 dbSNP
rs115568221 1041 dbSNP
rs1024156939 1046 dbSNP
rs971181654 1047 dbSNP
rs980056757 1053 dbSNP
rs1244316714 1058 dbSNP
rs34079057 1060 dbSNP
rs1266198547 1062 dbSNP
rs1315697710 1082 dbSNP
rs1415671383 1083 dbSNP
rs1402487322 1106 dbSNP
rs571210831 1107 dbSNP
rs962962394 1110 dbSNP
rs141742028 1115 dbSNP
rs1203056653 1117 dbSNP
rs1391731573 1119 dbSNP
rs1188939464 1124 dbSNP
rs962772378 1131 dbSNP
rs1246110063 1142 dbSNP
rs1251200259 1143 dbSNP
rs1483652967 1150 dbSNP
rs920948410 1152 dbSNP
rs1278190370 1154 dbSNP
rs1198902640 1157 dbSNP
rs953898622 1164 dbSNP
rs918574771 1167 dbSNP
rs930076987 1172 dbSNP
rs1363723584 1174 dbSNP
rs1286413161 1180 dbSNP
rs986815823 1184 dbSNP
rs28536719 1193 dbSNP
rs28576519 1195 dbSNP
rs1333123867 1209 dbSNP
rs1432532376 1210 dbSNP
rs912731369 1213 dbSNP
rs1169057886 1214 dbSNP
rs1423659292 1217 dbSNP
rs551528743 1226 dbSNP
rs986551468 1231 dbSNP
rs912322020 1244 dbSNP
rs1183454108 1249 dbSNP
rs1473183721 1258 dbSNP
rs1237028941 1260 dbSNP
rs1349627097 1265 dbSNP
rs1185863110 1268 dbSNP
rs1039986986 1271 dbSNP
rs779337443 1278 dbSNP
rs1226384729 1283 dbSNP
rs1204909433 1289 dbSNP
rs376795432 1299 dbSNP
rs1368619939 1303 dbSNP
rs904088124 1305 dbSNP
rs368946709 1309 dbSNP
rs936596226 1315 dbSNP
rs1054363681 1323 dbSNP
rs1369453501 1324 dbSNP
rs1410326184 1335 dbSNP
rs570038934 1338 dbSNP
rs1299874610 1341 dbSNP
rs1412378905 1351 dbSNP
rs891438346 1354 dbSNP
rs1308194995 1364 dbSNP
rs1009997560 1371 dbSNP
rs1024058880 1371 dbSNP
rs1408990627 1371 dbSNP
rs373111945 1372 dbSNP
rs1162954243 1375 dbSNP
rs948759858 1392 dbSNP
rs886051109 1401 dbSNP
rs1473582951 1413 dbSNP
rs1001762411 1420 dbSNP
rs748337294 1424 dbSNP
rs1034296669 1430 dbSNP
rs962970245 1437 dbSNP
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rs1004349162 1484 dbSNP
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rs1273967028 1523 dbSNP
rs1323734218 1524 dbSNP
rs1458915483 1530 dbSNP
rs1025609993 1531 dbSNP
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rs951342601 1544 dbSNP
rs1427520400 1549 dbSNP
rs1192194895 1550 dbSNP
rs1254716273 1554 dbSNP
rs1015772690 1555 dbSNP
rs886051110 1564 dbSNP
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rs1182767245 1574 dbSNP
rs1465877030 1579 dbSNP
rs1268263998 1597 dbSNP
rs1258729848 1609 dbSNP
rs1314826489 1614 dbSNP
rs1302885781 1621 dbSNP
rs912636559 1627 dbSNP
rs1366597180 1628 dbSNP
rs1301189190 1629 dbSNP
rs1437252793 1629 dbSNP
rs1028606091 1647 dbSNP
rs953717715 1650 dbSNP
rs1361127426 1651 dbSNP
rs1176975901 1652 dbSNP
rs1388998291 1654 dbSNP
rs1414286643 1657 dbSNP
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rs57589132 1657 dbSNP
rs113071870 1660 dbSNP
rs1171909042 1660 dbSNP
rs1247938347 1662 dbSNP
rs1185448065 1663 dbSNP
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rs1019351161 1679 dbSNP
rs966871534 1682 dbSNP
rs925451150 1685 dbSNP
rs1210324868 1687 dbSNP
rs977857960 1690 dbSNP
rs936931848 1696 dbSNP
rs1277974333 1702 dbSNP
rs925138112 1710 dbSNP
rs936565247 1714 dbSNP
rs567659062 1721 dbSNP
rs1554527 1725 dbSNP
rs1296705457 1728 dbSNP
rs777972348 1734 dbSNP
rs916520940 1737 dbSNP
rs747157552 1744 dbSNP
rs1303664377 1747 dbSNP
rs561525888 1748 dbSNP
rs1373832444 1751 dbSNP
rs907244596 1755 dbSNP
rs553453653 1762 dbSNP
rs546611820 1766 dbSNP
rs906934282 1779 dbSNP
rs1001270387 1787 dbSNP
rs1034611407 1790 dbSNP
rs886051111 1799 dbSNP
rs1297220504 1800 dbSNP
rs1366222302 1801 dbSNP
rs1216339144 1803 dbSNP
rs578008401 1810 dbSNP
rs995834488 1812 dbSNP
rs1312074416 1813 dbSNP
rs770892084 1813 dbSNP
rs1250721443 1830 dbSNP
rs1225083790 1834 dbSNP
rs898651521 1835 dbSNP
rs778489832 1838 dbSNP
rs904312301 1841 dbSNP
rs995694791 1845 dbSNP
rs1265353015 1847 dbSNP
rs1313578458 1848 dbSNP
rs1028574875 1856 dbSNP
rs1414239219 1865 dbSNP
rs1353815702 1872 dbSNP
rs1025511836 1873 dbSNP
rs1410863423 1883 dbSNP
rs1370291564 1886 dbSNP
rs538871697 1896 dbSNP
rs776375597 1898 dbSNP
rs1369547954 1903 dbSNP
rs1019702197 1904 dbSNP
rs966465229 1922 dbSNP
rs951415197 1923 dbSNP
rs1008168963 1926 dbSNP
rs1446800532 1928 dbSNP
rs1432493273 1931 dbSNP
rs1183839087 1933 dbSNP
rs1483273023 1942 dbSNP
rs1019678464 1944 dbSNP
rs1176784102 1967 dbSNP
rs977825563 1968 dbSNP
rs964492959 1971 dbSNP
rs1032083249 1982 dbSNP
rs1232759009 1991 dbSNP
rs957849256 2000 dbSNP
rs1290467305 2001 dbSNP
rs1229301122 2006 dbSNP
rs1408008895 2014 dbSNP
rs990653408 2015 dbSNP
rs188392935 2019 dbSNP
rs1389607501 2022 dbSNP
rs949328859 2038 dbSNP
rs180946373 2044 dbSNP
rs981442077 2048 dbSNP
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rs1391584380 2058 dbSNP
rs1433185899 2069 dbSNP
rs1472736793 2079 dbSNP
rs759262779 2081 dbSNP
rs1179465184 2088 dbSNP
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rs940032434 2098 dbSNP
rs1268009550 2112 dbSNP
rs1037098024 2118 dbSNP
rs1367047212 2120 dbSNP
rs1220313178 2122 dbSNP
rs1467070799 2128 dbSNP
rs1270142181 2133 dbSNP
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rs1447190026 2195 dbSNP
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rs570447852 4875 dbSNP
rs1476689139 4883 dbSNP
rs1443909661 4893 dbSNP
rs572959480 4896 dbSNP
rs964464207 4904 dbSNP
rs1235859355 4905 dbSNP
rs1200540484 4906 dbSNP
rs1318886516 4908 dbSNP
rs1246021789 4911 dbSNP
rs997661681 4914 dbSNP
rs1030060775 4915 dbSNP
rs1014857047 4924 dbSNP
rs955870833 4928 dbSNP
rs16966843 4933 dbSNP
rs143932642 4938 dbSNP
rs1377606331 4940 dbSNP
rs1300583578 4947 dbSNP
rs886051122 4948 dbSNP
rs923434588 4948 dbSNP
rs1400603535 4956 dbSNP
rs1330319829 4962 dbSNP
rs1463703238 4970 dbSNP
rs953567737 4977 dbSNP
rs986820247 4977 dbSNP
rs1273444196 4982 dbSNP
rs1423183757 4983 dbSNP
rs886051123 4988 dbSNP
rs914817065 4993 dbSNP
rs969043337 4997 dbSNP
rs979436269 4998 dbSNP
rs1180625363 5004 dbSNP
rs1458235438 5006 dbSNP
rs946389317 5013 dbSNP
rs1439277870 5019 dbSNP
rs1043430924 5027 dbSNP
rs923567862 5029 dbSNP
rs1244449725 5031 dbSNP
rs1320472618 5036 dbSNP
rs935070534 5053 dbSNP
rs1241478159 5054 dbSNP
rs1242713408 5058 dbSNP
rs1056212837 5059 dbSNP
rs1185472905 5065 dbSNP
rs896343039 5067 dbSNP
rs1392357777 5072 dbSNP
rs1293897906 5074 dbSNP
rs1457185663 5082 dbSNP
rs141174183 5084 dbSNP
rs1160439596 5090 dbSNP
rs1045408728 5091 dbSNP
rs755172917 5091 dbSNP
rs887711774 5093 dbSNP
rs1176842636 5096 dbSNP
rs1169054974 5108 dbSNP
rs8026118 5111 dbSNP
rs1468506348 5114 dbSNP
rs938056007 5118 dbSNP
rs535387072 5125 dbSNP
rs1404839513 5126 dbSNP
rs1487736515 5133 dbSNP
rs146871244 5136 dbSNP
rs1014888300 5141 dbSNP
rs1452984749 5143 dbSNP
rs865774437 5145 dbSNP
rs1284700031 5146 dbSNP
rs1236167997 5151 dbSNP
rs1338097586 5151 dbSNP
rs961981285 5161 dbSNP
rs918038896 5174 dbSNP
rs1343456306 5175 dbSNP
rs998051081 5183 dbSNP
rs541213700 5203 dbSNP
rs1359759890 5204 dbSNP
rs1047925190 5205 dbSNP
rs1467604866 5205 dbSNP
rs532713482 5209 dbSNP
rs534154937 5210 dbSNP
rs888003987 5225 dbSNP
rs1431651674 5229 dbSNP
rs1006896738 5231 dbSNP
rs886051124 5233 dbSNP
rs1039317132 5234 dbSNP
rs900146985 5250 dbSNP
rs986299257 5258 dbSNP
rs78521927 5264 dbSNP
rs1021778340 5270 dbSNP
rs1262324283 5283 dbSNP
rs1320956893 5292 dbSNP
rs768961334 5292 dbSNP
rs1279873370 5295 dbSNP
rs1205886388 5301 dbSNP
rs1259725475 5305 dbSNP
rs968972516 5309 dbSNP
rs997230230 5313 dbSNP
rs977631384 5323 dbSNP
rs1030031173 5337 dbSNP
rs955799109 5346 dbSNP
rs886051125 5347 dbSNP
rs1244296784 5353 dbSNP
rs1009986573 5357 dbSNP
rs1172054537 5363 dbSNP
rs577649995 5370 dbSNP
rs923639936 5370 dbSNP
rs1021431915 5377 dbSNP
rs934975709 5386 dbSNP
rs774531087 5387 dbSNP
rs192448813 5390 dbSNP
rs1190275719 5396 dbSNP
rs115003524 5399 dbSNP
rs184793714 5410 dbSNP
rs1199331155 5411 dbSNP
rs1477015626 5417 dbSNP
rs547680341 5419 dbSNP
rs1259545377 5423 dbSNP
rs959636167 5424 dbSNP
rs1218836737 5429 dbSNP
rs887580351 5430 dbSNP
rs992166434 5433 dbSNP
rs917966244 5441 dbSNP
rs1328101924 5446 dbSNP
rs897866151 5447 dbSNP
rs1450486091 5460 dbSNP
rs187951608 5461 dbSNP
rs997514399 5463 dbSNP
rs929392742 5467 dbSNP
rs560411599 5468 dbSNP
rs909358644 5473 dbSNP
rs1473420312 5478 dbSNP
rs1368333452 5491 dbSNP
rs1182481111 5502 dbSNP
rs1459554467 5507 dbSNP
rs140245434 5521 dbSNP
rs889225014 5530 dbSNP
rs551994427 5541 dbSNP
rs1270637751 5543 dbSNP
rs1211341641 5545 dbSNP
rs1225128743 5548 dbSNP
rs563936449 5553 dbSNP
rs531356888 5555 dbSNP
rs1243657254 5564 dbSNP
rs1021804473 5574 dbSNP
rs755112584 5574 dbSNP
rs1446402419 5576 dbSNP
rs968871780 5577 dbSNP
rs1286490380 5579 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 161742.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065667. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cacagAUAUGAGACGGUGAAAu 5'
               | |::|:  ||||||| 
Target 5' uucaaUUUGUUUAACCACUUUg 3'
 		10 - 31
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM1065667
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_6
Location of target site ENST00000299084.4 | 3UTR | AUUAAUAUUUUCAAUUUGUUUAACCACUUUGCUGCUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
276 hsa-miR-4796-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057030 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT065682 ACVR1B activin A receptor type 1B 2 6
MIRT066973 ATXN7L3B ataxin 7 like 3B 2 2
MIRT068903 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT069713 FOXJ3 forkhead box J3 2 2
MIRT072259 B2M beta-2-microglobulin 2 10
MIRT074331 TNRC6A trinucleotide repeat containing 6A 2 10
MIRT075132 C16ORF70 chromosome 16 open reading frame 70 2 4
MIRT077079 KRT10 keratin 10 2 8
MIRT084604 BCL2L11 BCL2 like 11 2 8
MIRT088056 UBXN2A UBX domain protein 2A 2 4
MIRT103212 SP4 Sp4 transcription factor 2 6
MIRT108733 XIAP X-linked inhibitor of apoptosis 2 2
MIRT135263 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 8
MIRT140170 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT173042 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT182530 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT184890 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT187490 PCBP2 poly(rC) binding protein 2 2 4
MIRT188195 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT190442 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT201089 ZNF805 zinc finger protein 805 2 2
MIRT213239 REST RE1 silencing transcription factor 2 2
MIRT213335 KIAA0232 KIAA0232 2 2
MIRT220130 CAV1 caveolin 1 2 2
MIRT257298 FOXC1 forkhead box C1 2 2
MIRT260352 XRCC6 X-ray repair cross complementing 6 2 6
MIRT262478 KLF6 Kruppel like factor 6 2 2
MIRT263459 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT291952 TPM4 tropomyosin 4 2 2
MIRT295277 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT300679 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT322414 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT338103 CLIC4 chloride intracellular channel 4 2 4
MIRT361507 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT365827 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT371746 ATXN1 ataxin 1 2 2
MIRT375470 NFAT5 nuclear factor of activated T-cells 5 2 6
MIRT387879 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT395213 PRKCB protein kinase C beta 2 2
MIRT407418 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT442641 TBC1D12 TBC1 domain family member 12 2 2
MIRT442757 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT443435 MAPT microtubule associated protein tau 2 2
MIRT443707 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT444306 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT447332 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 2 2
MIRT448310 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT448362 TSR1 TSR1, ribosome maturation factor 2 6
MIRT448388 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT448640 NPNT nephronectin 2 2
MIRT450184 TMEM9B TMEM9 domain family member B 2 2
MIRT452303 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 2
MIRT453732 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT455237 KIAA2013 KIAA2013 2 2
MIRT456354 CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 2 2
MIRT457591 NCOA3 nuclear receptor coactivator 3 2 2
MIRT458288 FUT10 fucosyltransferase 10 2 2
MIRT458694 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT462073 CCDC77 coiled-coil domain containing 77 2 2
MIRT462122 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT463267 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT465103 TSC22D3 TSC22 domain family member 3 2 4
MIRT465108 TSC22D2 TSC22 domain family member 2 2 4
MIRT465228 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT465830 TMEM64 transmembrane protein 64 2 2
MIRT466450 TFAM transcription factor A, mitochondrial 2 8
MIRT467464 SNAPIN SNAP associated protein 2 2
MIRT467490 SMIM13 small integral membrane protein 13 2 6
MIRT467890 SLC22A23 solute carrier family 22 member 23 2 2
MIRT468846 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT469699 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT469853 PXK PX domain containing serine/threonine kinase like 2 8
MIRT470265 PRR14L proline rich 14 like 2 2
MIRT471136 PHF19 PHD finger protein 19 2 2
MIRT471265 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471917 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT472051 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT472161 NIN ninein 2 4
MIRT472339 NETO2 neuropilin and tolloid like 2 2 4
MIRT473262 MIDN midnolin 2 10
MIRT473326 MEX3A mex-3 RNA binding family member A 2 2
MIRT474868 KDM5B lysine demethylase 5B 2 2
MIRT475050 JOSD1 Josephin domain containing 1 2 2
MIRT475467 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT475695 HHIPL1 HHIP like 1 2 2
MIRT476905 FBXL5 F-box and leucine rich repeat protein 5 2 12
MIRT477187 F3 coagulation factor III, tissue factor 2 8
MIRT477281 ERGIC2 ERGIC and golgi 2 2 2
MIRT478551 CTNND1 catenin delta 1 2 2
MIRT479035 COIL coilin 2 10
MIRT479059 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 8
MIRT479263 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479801 CCND1 cyclin D1 2 12
MIRT479847 CCDC86 coiled-coil domain containing 86 2 2
MIRT480522 C11orf30 EMSY, BRCA2 interacting transcriptional repressor 2 10
MIRT480556 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT481340 ATL3 atlastin GTPase 3 2 2
MIRT481960 ANKH ANKH inorganic pyrophosphate transport regulator 2 8
MIRT482135 AKAP11 A-kinase anchoring protein 11 2 12
MIRT482474 ADAR adenosine deaminase, RNA specific 2 4
MIRT484824 ZNFX1 zinc finger NFX1-type containing 1 2 2
MIRT484911 ZFYVE26 zinc finger FYVE-type containing 26 2 4
MIRT485188 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 4
MIRT485366 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT488821 TBC1D28 TBC1 domain family member 28 2 2
MIRT491802 ZFYVE21 zinc finger FYVE-type containing 21 2 8
MIRT492006 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT492365 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493389 KIAA0513 KIAA0513 2 6
MIRT493667 HBP1 HMG-box transcription factor 1 2 2
MIRT494068 DUSP2 dual specificity phosphatase 2 2 4
MIRT494384 SOLH calpain 15 2 2
MIRT494426 BTG2 BTG anti-proliferation factor 2 2 4
MIRT494775 ANKRD33B ankyrin repeat domain 33B 2 10
MIRT498159 FEM1C fem-1 homolog C 2 8
MIRT499904 KIAA1191 KIAA1191 2 4
MIRT500763 TMEM127 transmembrane protein 127 2 6
MIRT501460 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501955 MAPRE3 microtubule associated protein RP/EB family member 3 2 8
MIRT502367 GIGYF1 GRB10 interacting GYF protein 1 2 8
MIRT502400 GATA6 GATA binding protein 6 2 8
MIRT503444 GINS4 GINS complex subunit 4 2 4
MIRT503605 ZNF780A zinc finger protein 780A 2 2
MIRT503824 TMEM242 transmembrane protein 242 2 4
MIRT504095 C9orf40 chromosome 9 open reading frame 40 2 6
MIRT505278 TUBB2A tubulin beta 2A class IIa 2 2
MIRT505489 SRSF2 serine and arginine rich splicing factor 2 2 4
MIRT505740 SEPT2 septin 2 2 4
MIRT505976 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT506228 PFKP phosphofructokinase, platelet 2 8
MIRT506431 NAGK N-acetylglucosamine kinase 2 6
MIRT506454 NACC2 NACC family member 2 2 4
MIRT506617 MARCH6 membrane associated ring-CH-type finger 6 2 8
MIRT506838 KIF23 kinesin family member 23 2 4
MIRT506865 KIAA1147 KIAA1147 2 2
MIRT507189 FZD9 frizzled class receptor 9 2 6
MIRT507235 FOXK2 forkhead box K2 2 4
MIRT507362 FAM129A family with sequence similarity 129 member A 2 6
MIRT507942 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT508087 ANKRD52 ankyrin repeat domain 52 2 2
MIRT508134 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT511083 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 4
MIRT511257 KLHL36 kelch like family member 36 2 6
MIRT511610 HIST1H4H histone cluster 1 H4 family member h 2 2
MIRT511725 HIST1H2BF histone cluster 1 H2B family member f 2 2
MIRT512318 ACTR2 ARP2 actin related protein 2 homolog 2 6
MIRT513462 NARS asparaginyl-tRNA synthetase 2 6
MIRT513984 CEP97 centrosomal protein 97 2 2
MIRT513998 CENPQ centromere protein Q 2 4
MIRT514035 BNIP2 BCL2 interacting protein 2 2 2
MIRT514096 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 6
MIRT514993 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT517016 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT524699 BTG3 BTG anti-proliferation factor 3 2 8
MIRT525199 ZNF93 zinc finger protein 93 2 2
MIRT527200 XIRP2 xin actin binding repeat containing 2 2 2
MIRT527469 CLEC12B C-type lectin domain family 12 member B 2 4
MIRT527888 SERF1B small EDRK-rich factor 1B 2 2
MIRT529344 SERF1A small EDRK-rich factor 1A 2 2
MIRT529493 TPD52L3 tumor protein D52 like 3 2 2
MIRT531821 ZNF264 zinc finger protein 264 2 6
MIRT531835 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT532509 KCNN1 potassium calcium-activated channel subfamily N member 1 2 2
MIRT533390 U2SURP U2 snRNP associated SURP domain containing 2 6
MIRT533836 TGFBR2 transforming growth factor beta receptor 2 2 6
MIRT533876 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT534005 SUV420H1 lysine methyltransferase 5B 2 2
MIRT534626 RNASEH1 ribonuclease H1 2 4
MIRT537731 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT537781 EIF4H eukaryotic translation initiation factor 4H 2 6
MIRT538716 CAPRIN2 caprin family member 2 2 4
MIRT541088 RLIM ring finger protein, LIM domain interacting 2 2
MIRT541284 GLO1 glyoxalase I 2 2
MIRT542058 SLC25A46 solute carrier family 25 member 46 2 2
MIRT542952 GDF11 growth differentiation factor 11 2 2
MIRT543506 PLS1 plastin 1 2 2
MIRT543578 RPF2 ribosome production factor 2 homolog 2 4
MIRT545201 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT546254 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT546293 TMEM200C transmembrane protein 200C 2 4
MIRT546457 SLC5A3 solute carrier family 5 member 3 2 4
MIRT546494 SIK1 salt inducible kinase 1 2 2
MIRT546820 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT547080 PLRG1 pleiotropic regulator 1 2 2
MIRT548228 FJX1 four jointed box 1 2 4
MIRT548338 EPHA4 EPH receptor A4 2 2
MIRT548390 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT548463 EGLN3 egl-9 family hypoxia inducible factor 3 2 2
MIRT548862 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT549821 LUZP2 leucine zipper protein 2 2 2
MIRT550092 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT550241 PVR poliovirus receptor 2 4
MIRT551744 FMNL2 formin like 2 2 2
MIRT552203 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT552639 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT552684 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT553031 USP48 ubiquitin specific peptidase 48 2 2
MIRT553474 TNKS2 tankyrase 2 2 2
MIRT554329 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT554411 SCD stearoyl-CoA desaturase 2 2
MIRT554474 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT554529 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT554554 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 2
MIRT554611 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT554744 RHOC ras homolog family member C 2 2
MIRT554802 RGMB repulsive guidance molecule family member b 2 4
MIRT555165 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT555192 PRUNE2 prune homolog 2 2 2
MIRT556143 MED17 mediator complex subunit 17 2 2
MIRT556591 LEPROT leptin receptor overlapping transcript 2 2
MIRT556903 ISOC1 isochorismatase domain containing 1 2 2
MIRT557756 FRS2 fibroblast growth factor receptor substrate 2 2 2
MIRT557828 FOXJ2 forkhead box J2 2 2
MIRT558220 EFCAB14 EF-hand calcium binding domain 14 2 4
MIRT558331 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558934 CBX1 chromobox 1 2 2
MIRT559078 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559439 ARSJ arylsulfatase family member J 2 2
MIRT561376 TXNIP thioredoxin interacting protein 2 2
MIRT561644 RUNX3 runt related transcription factor 3 2 2
MIRT561741 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562214 HMGB2 high mobility group box 2 2 2
MIRT562558 CCDC71L coiled-coil domain containing 71 like 2 4
MIRT562964 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT563378 DSPP dentin sialophosphoprotein 2 2
MIRT566557 OTUD4 OTU deubiquitinase 4 2 2
MIRT566878 LRP12 LDL receptor related protein 12 2 2
MIRT567008 KLHL15 kelch like family member 15 2 2
MIRT567050 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT567112 ITGB1 integrin subunit beta 1 2 2
MIRT567542 FGFR1OP FGFR1 oncogene partner 2 2
MIRT567627 FAM210A family with sequence similarity 210 member A 2 2
MIRT567684 EIF4A2 eukaryotic translation initiation factor 4A2 2 2
MIRT567915 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT571014 CKAP2 cytoskeleton associated protein 2 2 2
MIRT571220 F2R coagulation factor II thrombin receptor 2 2
MIRT571678 RRAS2 RAS related 2 2 2
MIRT571693 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT571723 RPL17-C18orf32 RPL17-C18orf32 readthrough 2 2
MIRT571860 NKIRAS1 NFKB inhibitor interacting Ras like 1 2 2
MIRT572045 GPR137B G protein-coupled receptor 137B 2 2
MIRT572209 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT573375 LIMA1 LIM domain and actin binding 1 2 2
MIRT573707 RBM12B RNA binding motif protein 12B 2 2
MIRT573915 SNAP47 synaptosome associated protein 47 2 2
MIRT574719 HAUS8 HAUS augmin like complex subunit 8 2 2
MIRT610998 BRI3BP BRI3 binding protein 2 2
MIRT615446 FAXC failed axon connections homolog 2 2
MIRT616437 FAM126B family with sequence similarity 126 member B 2 2
MIRT624424 CBX8 chromobox 8 2 2
MIRT625079 C15orf41 chromosome 15 open reading frame 41 2 2
MIRT628867 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT630570 SOWAHA sosondowah ankyrin repeat domain family member A 2 4
MIRT634454 PAK6 p21 (RAC1) activated kinase 6 2 2
MIRT640010 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT641800 USP32 ubiquitin specific peptidase 32 2 2
MIRT663408 SYT17 synaptotagmin 17 2 2
MIRT664793 LIAS lipoic acid synthetase 2 4
MIRT672157 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT679620 RRP36 ribosomal RNA processing 36 2 2
MIRT682524 GJD3 gap junction protein delta 3 2 2
MIRT684063 FOLR1 folate receptor 1 2 2
MIRT688711 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT691249 DFNB59 pejvakin 2 2
MIRT693152 THEM4 thioesterase superfamily member 4 2 2
MIRT693198 MKI67 marker of proliferation Ki-67 2 2
MIRT700440 PURB purine rich element binding protein B 2 2
MIRT701591 MYPN myopalladin 2 2
MIRT701966 MINK1 misshapen like kinase 1 2 2
MIRT702051 METTL21A methyltransferase like 21A 2 2
MIRT702588 JARID2 jumonji and AT-rich interaction domain containing 2 2 2
MIRT722312 DHCR24 24-dehydrocholesterol reductase 2 2
MIRT725222 PEA15 phosphoprotein enriched in astrocytes 15 2 2
MIRT755772 RAD51 RAD51 recombinase 5 1
MIRT755773 XRCC3 X-ray repair cross complementing 3 5 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4796-3p 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4796-3p Erlotinib 176870 NSC718781 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-4796-3p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-4796-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4796-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4796-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4796-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-4796-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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