miRTarBase - #MIRT156224


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pre-miRNA Information
pre-miRNA hsa-mir-511   
Genomic Coordinates chr10: 17845107 - 17845193
Description Homo sapiens miR-511 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-511-3p
Sequence 54| AAUGUGUAGCAAAAGACAGA |73
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30502461 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs548691953 3 dbSNP
rs1322530388 4 dbSNP
rs1313209508 11 dbSNP
rs1223031412 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SLC25A12   
Synonyms AGC1, ARALAR, EIEE39
Description solute carrier family 25 member 12
Transcript NM_003705   
Expression
Putative miRNA Targets on SLC25A12
3'UTR of SLC25A12
(miRNA target sites are highlighted)		 
>SLC25A12|NM_003705|3'UTR
   1 TGAGACAACTGTTGAGTGTGGCAAAATGGCGCCTTGAAGAAAGAGGCCTAGGAGAGCAGCCCTGTAATGTATCCAGTCAG
  81 CTGCATGGTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTTATAAAATAATCA
 161 TTTGCCCAGGGAAAAAACCACAACGCTGTTTCAAGCTTTAGTCTTATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAA
 241 TTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACATATTGTACATCTTTGTACAGAGACATCTT
 321 GGCACCTCATCCCAACAAATCACATTTGTAGAAATGTAATGCGGTTCTGAGTGGCTTGAAATGTACAGAATGTTTTGAAA
 401 GTGTTTTATTAAGAATCACACAAAAATAAATGTATTAAAATTAAATTCATTCTCTTATTGGTGACTTATGGAAATAAAGC
 481 ATCAATATTGGATGTATTTAATTCCTAGTTTGTTTTCCATTCTGGAATAAAAAGGTATTTGCTGATAAAAGGCATAACGA
 561 GACATAGTGCTGCTACCACTGAATAAGTGATACTTTGGAAAGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGAC
 641 TTGTGTGTGCTGATGTGTTTCCATTTGTATTTAATGTGTGTAGACCCTCCTCTGTTCATCAATCAAAAAGCATTTCCTAG
 721 GCAGCTCCTCGCCTGTCAGTGTGCATATGGAAACAGGGACATCTCCATCATTACTGGCTTAGTTTTGCTTTCCTTTGACA
 801 CAGTAAGGCAAAGGCCAAGCTTTCAAAAGAGTAAAGGATACTTTCACAATTTCCCTTCATATGGATATGATTCCAGTCAA
 881 AAATAAAATGCACACCAAAATGTATACATGTAGTTGGATTTTTCTTTGTAAATATACTGATAATACTTTTTGTTCTGATT
 961 GACTACTGATTGCAAATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAATTAGTTTTAGAA
1041 AGGGCTAGCGCAGAGTGAAGGGAGGGAAGAAGAAAGAGAAGAAAAGCTCTATATGGTGATTTAGTGGGGTCTAGGTTCTT
1121 ACTTTGGAATCCAAATGCAAACTGTTCTAAAAGTCACTCATCAAGGGCGTGATTACTAATTTGGATCTAAACATAGATCT
1201 TGACAGCCACATCTACACTTTGATATGGATGTGATTTGATGTGCAGTATCAGAATTTATTTACCTTACCAAAGTGCTCTG
1281 GGAAGACATTATTGCTACTGCCAGTAAGCTGGGATATGAGAATGTATGCAAATATTTTCAAGAGGCGAGCCTGGAGACAG
1361 ACCAAGTTACTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGA
1441 GGCCCTCCAGGAACAAAAGAATTAGCTTTGAAAGCAAGTTATTTTCAAATGTATTAGATTGGTCTCATGGGAGTGGAACA
1521 AATAATAATACAGTTGTTTTGCTACTACCACTTGTTAGAAATATATAAGTAGTCCATGGATATGTGATTACAAAAGAATC
1601 CTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACCCTCCTTCTACCTCCACCACTTCCTGGCCCAGAGGTA
1681 ATCACTGCTAACAGGTTACAGCATGAATATGTAGTCTGTTTTTCATAACTCTATAGAAATATATGTACATATTTATATTT
1761 TAGAAACAGGATTATGTTATGTGTGTGTTATTCTGTGTCTTGCTTTTGTTCACTTAATGTGTTTTGGATATCTTTCCATG
1841 TCAGTTTATAAAGTTTTATTTTTAATGGC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agACAGA-AAAC-G-AUGUGUAa 5'
            | ||| | || | ||:|||| 
Target 5' tcTTTCTGTATGACATATACATa 3'
 117 - 139 134.00 -8.92
2 
miRNA  3' agacagaaAACGAUGUGUAa 5'
                  ||| ||||:|| 
Target 5' tacagtgaTTG-TACATATt 3'
 277 - 295 131.00 -6.20
3 
miRNA  3' agacagaAAACGAUGUGUAa 5'
                 | || ||||:|| 
Target 5' agaaataTATG-TACATATt 3'
 1735 - 1753 128.00 -5.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
332325 994 ClinVar
COSN1228736 6 COSMIC
COSN30150483 14 COSMIC
COSN30714750 31 COSMIC
COSN30150481 36 COSMIC
COSN31497135 38 COSMIC
COSN30160741 115 COSMIC
COSN31611611 135 COSMIC
COSN31487066 171 COSMIC
COSN26552491 178 COSMIC
COSN31545761 184 COSMIC
COSN31570543 251 COSMIC
COSN31572378 363 COSMIC
COSN19194165 899 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs368874798 5 dbSNP
rs371474141 8 dbSNP
rs749432474 20 dbSNP
rs1162608969 21 dbSNP
rs200445677 25 dbSNP
rs756390991 26 dbSNP
rs1406983107 28 dbSNP
rs368067669 30 dbSNP
rs779771090 31 dbSNP
rs1195608934 37 dbSNP
rs1489371381 47 dbSNP
rs758213790 49 dbSNP
rs914449675 64 dbSNP
rs1028081358 67 dbSNP
rs996706460 69 dbSNP
rs779748917 72 dbSNP
rs1431217721 74 dbSNP
rs1244459667 76 dbSNP
rs1362148077 82 dbSNP
rs1285334694 83 dbSNP
rs958387271 99 dbSNP
rs928264155 100 dbSNP
rs561549863 114 dbSNP
rs1255679702 115 dbSNP
rs1296104513 123 dbSNP
rs13035825 124 dbSNP
rs1366081524 126 dbSNP
rs376398440 134 dbSNP
rs1165613922 137 dbSNP
rs1473772160 148 dbSNP
rs1009637801 157 dbSNP
rs113403751 165 dbSNP
rs1056143013 167 dbSNP
rs1423017512 170 dbSNP
rs1411918366 172 dbSNP
rs939549172 172 dbSNP
rs372390497 178 dbSNP
rs563870217 184 dbSNP
rs778240087 185 dbSNP
rs952345070 187 dbSNP
rs930851757 192 dbSNP
rs1339301811 194 dbSNP
rs1218666411 207 dbSNP
rs1478270566 208 dbSNP
rs1421382729 214 dbSNP
rs1259391902 219 dbSNP
rs545658434 228 dbSNP
rs1342495099 230 dbSNP
rs766562020 240 dbSNP
rs1199517822 241 dbSNP
rs1279151900 244 dbSNP
rs1443864708 247 dbSNP
rs1265865796 257 dbSNP
rs920663262 260 dbSNP
rs972208605 264 dbSNP
rs940685644 268 dbSNP
rs911856496 269 dbSNP
rs1486303557 270 dbSNP
rs1173310946 290 dbSNP
rs1404816308 295 dbSNP
rs1488271823 296 dbSNP
rs1266504798 299 dbSNP
rs1418201647 302 dbSNP
rs867306569 303 dbSNP
rs183352962 304 dbSNP
rs578224237 307 dbSNP
rs1341720497 310 dbSNP
rs1402371727 315 dbSNP
rs553658382 324 dbSNP
rs955263876 326 dbSNP
rs1297169528 332 dbSNP
rs1223156567 333 dbSNP
rs902557738 358 dbSNP
rs568986072 360 dbSNP
rs1041569286 361 dbSNP
rs1028217027 362 dbSNP
rs1275020321 363 dbSNP
rs1349818831 369 dbSNP
rs1247684562 374 dbSNP
rs1319339950 376 dbSNP
rs975637545 388 dbSNP
rs967940880 397 dbSNP
rs1022458705 401 dbSNP
rs1009277795 410 dbSNP
rs1488605825 416 dbSNP
rs1218689407 418 dbSNP
rs914394212 432 dbSNP
rs1432605360 439 dbSNP
rs1055741489 441 dbSNP
rs1379547321 450 dbSNP
rs1438024890 455 dbSNP
rs757812385 457 dbSNP
rs572305038 458 dbSNP
rs981067904 464 dbSNP
rs1276117447 469 dbSNP
rs1387973086 470 dbSNP
rs1399124372 474 dbSNP
rs961840546 490 dbSNP
rs1323843886 495 dbSNP
rs1295161151 496 dbSNP
rs1034656563 505 dbSNP
rs754342085 512 dbSNP
rs1003227636 551 dbSNP
rs191707233 555 dbSNP
rs984544799 558 dbSNP
rs199931948 559 dbSNP
rs1164151346 561 dbSNP
rs764675274 563 dbSNP
rs1241112156 569 dbSNP
rs1045350302 577 dbSNP
rs555515048 591 dbSNP
rs930800472 592 dbSNP
rs1488215551 596 dbSNP
rs761178693 607 dbSNP
rs996419991 617 dbSNP
rs966231989 620 dbSNP
rs1018903231 626 dbSNP
rs1178248747 640 dbSNP
rs1191987073 643 dbSNP
rs1441870169 643 dbSNP
rs550984952 649 dbSNP
rs1368363020 663 dbSNP
rs1458839313 678 dbSNP
rs999909899 679 dbSNP
rs113965617 694 dbSNP
rs1044225091 696 dbSNP
rs1330198139 698 dbSNP
rs1377391519 710 dbSNP
rs34360900 716 dbSNP
rs1392877222 725 dbSNP
rs767853194 730 dbSNP
rs1321095997 731 dbSNP
rs11757 739 dbSNP
rs1055626292 740 dbSNP
rs1316068777 747 dbSNP
rs181107670 751 dbSNP
rs886055123 754 dbSNP
rs1238973056 761 dbSNP
rs562448681 767 dbSNP
rs1180520605 789 dbSNP
rs932009945 793 dbSNP
rs1424959716 804 dbSNP
rs1167524075 813 dbSNP
rs1419405998 814 dbSNP
rs1463560407 831 dbSNP
rs921170429 833 dbSNP
rs1312490818 839 dbSNP
rs1045417514 840 dbSNP
rs1300918908 845 dbSNP
rs940381406 859 dbSNP
rs1396538705 860 dbSNP
rs1294992952 863 dbSNP
rs1338551526 868 dbSNP
rs1218053937 869 dbSNP
rs1258763556 873 dbSNP
rs1309537805 888 dbSNP
rs1303133581 893 dbSNP
rs1385069981 902 dbSNP
rs907517414 909 dbSNP
rs1255843101 928 dbSNP
rs1366786451 946 dbSNP
rs1293054516 947 dbSNP
rs1447553095 949 dbSNP
rs984986239 952 dbSNP
rs1402756256 953 dbSNP
rs1477762912 957 dbSNP
rs975393526 959 dbSNP
rs576061664 965 dbSNP
rs1411367832 969 dbSNP
rs1173433070 973 dbSNP
rs1358371596 976 dbSNP
rs747855575 987 dbSNP
rs138037221 988 dbSNP
rs988392065 991 dbSNP
rs189758490 994 dbSNP
rs886055122 995 dbSNP
rs1364169381 996 dbSNP
rs956419620 997 dbSNP
rs974842384 998 dbSNP
rs1300789221 1002 dbSNP
rs1313184482 1006 dbSNP
rs966283870 1008 dbSNP
rs1267226697 1013 dbSNP
rs1034790036 1021 dbSNP
rs1217981484 1025 dbSNP
rs1458673577 1030 dbSNP
rs1003198015 1036 dbSNP
rs1235987914 1040 dbSNP
rs1423983032 1042 dbSNP
rs978353577 1045 dbSNP
rs904894236 1049 dbSNP
rs17499544 1050 dbSNP
rs1257589697 1052 dbSNP
rs13429367 1053 dbSNP
rs1434343850 1056 dbSNP
rs1292981762 1060 dbSNP
rs1368634358 1061 dbSNP
rs1236753375 1063 dbSNP
rs995060439 1064 dbSNP
rs899423590 1076 dbSNP
rs1353350992 1080 dbSNP
rs1241520842 1091 dbSNP
rs1036505220 1092 dbSNP
rs1286894969 1098 dbSNP
rs940882505 1102 dbSNP
rs890524582 1107 dbSNP
rs1034204040 1113 dbSNP
rs1245605866 1115 dbSNP
rs1230749025 1133 dbSNP
rs763069990 1138 dbSNP
rs1001342742 1144 dbSNP
rs1438791430 1148 dbSNP
rs1159104675 1158 dbSNP
rs10497374 1161 dbSNP
rs202209890 1165 dbSNP
rs1403513122 1168 dbSNP
rs1309823930 1169 dbSNP
rs1164241673 1175 dbSNP
rs1395301373 1189 dbSNP
rs371669352 1194 dbSNP
rs1443380091 1199 dbSNP
rs1329488144 1204 dbSNP
rs1376654467 1216 dbSNP
rs1447933815 1228 dbSNP
rs1281609295 1235 dbSNP
rs1354927847 1238 dbSNP
rs1228243984 1244 dbSNP
rs886055121 1251 dbSNP
rs768580780 1262 dbSNP
rs546400862 1271 dbSNP
rs1046084249 1275 dbSNP
rs568031600 1276 dbSNP
rs1457015242 1277 dbSNP
rs1182317424 1278 dbSNP
rs1234380676 1279 dbSNP
rs549559573 1280 dbSNP
rs746811339 1281 dbSNP
rs531425802 1296 dbSNP
rs1048690542 1298 dbSNP
rs930397728 1299 dbSNP
rs1463031665 1300 dbSNP
rs1168834022 1301 dbSNP
rs1399895436 1302 dbSNP
rs1410727569 1309 dbSNP
rs1043456687 1311 dbSNP
rs1331369156 1317 dbSNP
rs775209319 1318 dbSNP
rs1339078365 1326 dbSNP
rs921662157 1327 dbSNP
rs1446395043 1337 dbSNP
rs1001893796 1339 dbSNP
rs1355567922 1342 dbSNP
rs771779355 1346 dbSNP
rs915160964 1347 dbSNP
rs1316983838 1351 dbSNP
rs1304995159 1354 dbSNP
rs912043885 1357 dbSNP
rs1274859722 1358 dbSNP
rs1440419097 1364 dbSNP
rs987953728 1372 dbSNP
rs1209358178 1373 dbSNP
rs1464816058 1378 dbSNP
rs1258086320 1382 dbSNP
rs1476130521 1391 dbSNP
rs1377572396 1395 dbSNP
rs1422997631 1403 dbSNP
rs1475905258 1405 dbSNP
rs1169804249 1416 dbSNP
rs956554029 1421 dbSNP
rs745472405 1425 dbSNP
rs1377848304 1437 dbSNP
rs185047040 1439 dbSNP
rs978786969 1440 dbSNP
rs545919841 1445 dbSNP
rs868227205 1455 dbSNP
rs746921658 1460 dbSNP
rs1342646809 1465 dbSNP
rs1199700152 1467 dbSNP
rs927691100 1468 dbSNP
rs1280757194 1469 dbSNP
rs1486647222 1472 dbSNP
rs1214359010 1475 dbSNP
rs1022723474 1488 dbSNP
rs1447598066 1490 dbSNP
rs575445883 1491 dbSNP
rs1195630531 1493 dbSNP
rs1376095495 1498 dbSNP
rs1477808390 1515 dbSNP
rs1174717813 1524 dbSNP
rs1397262151 1531 dbSNP
rs1177447370 1537 dbSNP
rs1442679797 1539 dbSNP
rs886055120 1553 dbSNP
rs981898210 1564 dbSNP
rs147344147 1565 dbSNP
rs1382257635 1574 dbSNP
rs959458696 1576 dbSNP
rs1329046917 1583 dbSNP
rs1233094538 1588 dbSNP
rs756765765 1593 dbSNP
rs1349698257 1604 dbSNP
rs182032405 1616 dbSNP
rs994925835 1617 dbSNP
rs1218785699 1624 dbSNP
rs907075052 1625 dbSNP
rs963641681 1626 dbSNP
rs34492103 1628 dbSNP
rs1005217286 1631 dbSNP
rs1451314945 1634 dbSNP
rs868112041 1637 dbSNP
rs1255295653 1638 dbSNP
rs1438170128 1639 dbSNP
rs886319850 1642 dbSNP
rs1364918127 1647 dbSNP
rs1455783446 1650 dbSNP
rs1015617045 1653 dbSNP
rs1049221329 1656 dbSNP
rs1341323093 1659 dbSNP
rs1439713981 1662 dbSNP
rs1326095038 1670 dbSNP
rs1372946166 1674 dbSNP
rs1315040380 1682 dbSNP
rs1394661696 1688 dbSNP
rs1444262398 1692 dbSNP
rs1004996341 1711 dbSNP
rs1299179367 1715 dbSNP
rs1317504749 1715 dbSNP
rs189242897 1724 dbSNP
rs748792911 1731 dbSNP
rs1263759774 1733 dbSNP
rs1334168698 1733 dbSNP
rs1422120000 1736 dbSNP
rs890661453 1739 dbSNP
rs1275237001 1740 dbSNP
rs900163735 1742 dbSNP
rs1178462563 1749 dbSNP
rs1251674843 1761 dbSNP
rs1421467515 1762 dbSNP
rs1051880921 1767 dbSNP
rs563228216 1770 dbSNP
rs1359148219 1774 dbSNP
rs1165238409 1776 dbSNP
rs944454773 1780 dbSNP
rs1463716498 1783 dbSNP
rs1297456749 1785 dbSNP
rs904846666 1787 dbSNP
rs1472810746 1791 dbSNP
rs1393077382 1795 dbSNP
rs142701782 1795 dbSNP
rs1354935984 1797 dbSNP
rs1234020625 1799 dbSNP
rs1295179676 1813 dbSNP
rs1316355009 1823 dbSNP
rs1184871981 1824 dbSNP
rs148260036 1828 dbSNP
rs1263705709 1833 dbSNP
rs1481790498 1836 dbSNP
rs576391994 1849 dbSNP
rs1257388369 1853 dbSNP
rs1487285751 1855 dbSNP
rs185548081 1857 dbSNP
rs1052385165 1858 dbSNP
rs989720642 1858 dbSNP
rs935150395 1865 dbSNP
rs927743197 1867 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293
Disease 8604.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "HITS-CLIP data was present in GSM714642. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714642
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000422440.2 | 3UTR | AUAUGUACACACAUACAUAUAUAUUUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
239 hsa-miR-511-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT068303 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT072025 SCP2 sterol carrier protein 2 2 2
MIRT073626 IGF1R insulin like growth factor 1 receptor 2 2
MIRT080574 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT094167 PCGF3 polycomb group ring finger 3 2 4
MIRT096536 LIFR LIF receptor alpha 2 2
MIRT156224 SLC25A12 solute carrier family 25 member 12 2 2
MIRT177714 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT184922 ZNF268 zinc finger protein 268 2 2
MIRT185107 LYPLAL1 lysophospholipase like 1 2 2
MIRT193093 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT213346 TADA2B transcriptional adaptor 2B 2 2
MIRT225350 SDCBP syndecan binding protein 2 2
MIRT226972 AKAP2 A-kinase anchoring protein 2 2 6
MIRT226977 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 6
MIRT229844 YIPF6 Yip1 domain family member 6 2 2
MIRT230994 PRRG4 proline rich and Gla domain 4 2 2
MIRT270215 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 4
MIRT277060 NDFIP2 Nedd4 family interacting protein 2 2 4
MIRT278336 CFL2 cofilin 2 2 4
MIRT280390 CALM1 calmodulin 1 2 2
MIRT298042 BACH1 BTB domain and CNC homolog 1 2 2
MIRT302449 CLIP4 CAP-Gly domain containing linker protein family member 4 2 2
MIRT311937 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 4
MIRT329263 AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 2 2
MIRT359186 F2RL1 F2R like trypsin receptor 1 2 6
MIRT363208 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT371124 YTHDC1 YTH domain containing 1 2 2
MIRT386755 TAOK1 TAO kinase 1 2 2
MIRT395122 BAHD1 bromo adjacent homology domain containing 1 2 2
MIRT396089 MKLN1 muskelin 1 2 2
MIRT443566 EVX2 even-skipped homeobox 2 2 2
MIRT447626 CUL3 cullin 3 2 2
MIRT447680 ZNF264 zinc finger protein 264 2 2
MIRT451053 NT5C1B 5'-nucleotidase, cytosolic IB 2 2
MIRT452048 NT5C1B-RDH14 NT5C1B-RDH14 readthrough 2 2
MIRT459890 KIAA1191 KIAA1191 2 4
MIRT464483 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465264 TRIM44 tripartite motif containing 44 2 2
MIRT467570 SLITRK4 SLIT and NTRK like family member 4 2 2
MIRT467800 SLC2A14 solute carrier family 2 member 14 2 2
MIRT469543 RASAL2 RAS protein activator like 2 2 2
MIRT469931 PTPRJ protein tyrosine phosphatase, receptor type J 2 4
MIRT474056 LMNB2 lamin B2 2 2
MIRT474097 LMBR1L limb development membrane protein 1 like 2 2
MIRT475183 INSIG2 insulin induced gene 2 2 6
MIRT484264 FAM177A1 family with sequence similarity 177 member A1 2 2
MIRT487567 LOXL2 lysyl oxidase like 2 2 2
MIRT499080 CBWD1 COBW domain containing 1 2 6
MIRT499126 CBWD5 COBW domain containing 5 2 6
MIRT502093 KPNA5 karyopherin subunit alpha 5 2 8
MIRT503328 SOX5 SRY-box 5 2 6
MIRT503839 NCAM2 neural cell adhesion molecule 2 2 6
MIRT504030 CEP104 centrosomal protein 104 2 4
MIRT504314 LHFPL5 LHFPL tetraspan subfamily member 5 2 8
MIRT504525 BVES blood vessel epicardial substance 2 6
MIRT504680 CYGB cytoglobin 2 4
MIRT504815 DOCK7 dedicator of cytokinesis 7 2 4
MIRT505757 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT506151 PLEKHA3 pleckstrin homology domain containing A3 2 6
MIRT506908 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 6
MIRT508259 CD226 CD226 molecule 2 2
MIRT508307 XRCC3 X-ray repair cross complementing 3 2 4
MIRT508784 CDKL1 cyclin dependent kinase like 1 2 6
MIRT508897 C4orf29 abhydrolase domain containing 18 2 6
MIRT508967 TECRL trans-2,3-enoyl-CoA reductase like 2 4
MIRT508973 MLLT3 MLLT3, super elongation complex subunit 2 6
MIRT509149 TSC22D3 TSC22 domain family member 3 2 4
MIRT509188 TSPAN2 tetraspanin 2 2 4
MIRT509212 BRCC3 BRCA1/BRCA2-containing complex subunit 3 2 4
MIRT509214 SEC23IP SEC23 interacting protein 2 6
MIRT509237 PDE10A phosphodiesterase 10A 2 6
MIRT509248 OTX1 orthodenticle homeobox 1 2 6
MIRT509469 TRIM2 tripartite motif containing 2 2 4
MIRT509754 EFCAB11 EF-hand calcium binding domain 11 2 4
MIRT509805 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT509938 USP25 ubiquitin specific peptidase 25 2 4
MIRT509954 ITGA1 integrin subunit alpha 1 2 6
MIRT509965 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 4
MIRT509988 GTF2H1 general transcription factor IIH subunit 1 2 4
MIRT510036 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 6
MIRT510164 STARD8 StAR related lipid transfer domain containing 8 2 4
MIRT510199 CYP4F11 cytochrome P450 family 4 subfamily F member 11 2 9
MIRT510249 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 6
MIRT510502 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 2 2
MIRT510906 PURA purine rich element binding protein A 2 4
MIRT511051 NRF1 nuclear respiratory factor 1 2 4
MIRT511273 KLHL23 kelch like family member 23 2 4
MIRT511368 IL6ST interleukin 6 signal transducer 2 4
MIRT511521 HMGB2 high mobility group box 2 2 4
MIRT512004 DUSP7 dual specificity phosphatase 7 2 4
MIRT512080 CSRNP3 cysteine and serine rich nuclear protein 3 2 8
MIRT514234 EPOR erythropoietin receptor 2 4
MIRT515327 SLC35E3 solute carrier family 35 member E3 2 4
MIRT515409 WDR72 WD repeat domain 72 2 8
MIRT515973 C9orf156 tRNA methyltransferase O 2 4
MIRT516015 NLGN3 neuroligin 3 2 4
MIRT516271 DBT dihydrolipoamide branched chain transacylase E2 2 10
MIRT516495 GLRX2 glutaredoxin 2 2 4
MIRT517272 ANG angiogenin 2 4
MIRT517511 KCNK12 potassium two pore domain channel subfamily K member 12 2 4
MIRT517555 VENTX VENT homeobox 2 4
MIRT519511 RBM22 RNA binding motif protein 22 2 4
MIRT520350 UBN2 ubinuclein 2 2 2
MIRT520687 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT520960 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT521759 PPIL1 peptidylprolyl isomerase like 1 2 6
MIRT522036 PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 2 4
MIRT522127 NELL2 neural EGFL like 2 2 4
MIRT522624 MAP7D1 MAP7 domain containing 1 2 4
MIRT522761 LDLR low density lipoprotein receptor 2 6
MIRT522924 KAT6A lysine acetyltransferase 6A 2 6
MIRT523391 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 4
MIRT523851 ETV6 ETS variant 6 2 2
MIRT523890 EPHA5 EPH receptor A5 2 4
MIRT523945 E2F8 E2F transcription factor 8 2 4
MIRT524222 DCUN1D3 defective in cullin neddylation 1 domain containing 3 2 2
MIRT524410 CNTNAP5 contactin associated protein like 5 2 4
MIRT524568 CALML4 calmodulin like 4 2 4
MIRT524611 ENTHD1 ENTH domain containing 1 2 2
MIRT524907 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 2 4
MIRT525019 ABHD13 abhydrolase domain containing 13 2 6
MIRT525211 C19orf12 chromosome 19 open reading frame 12 2 2
MIRT528253 BMS1 BMS1, ribosome biogenesis factor 2 2
MIRT528294 ZNF76 zinc finger protein 76 2 2
MIRT531898 INVS inversin 2 4
MIRT535962 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT540823 SSPN sarcospan 2 4
MIRT541836 CDON cell adhesion associated, oncogene regulated 2 4
MIRT541914 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT542156 KIAA2018 upstream transcription factor family member 3 2 6
MIRT542175 SERTM1 serine rich and transmembrane domain containing 1 2 6
MIRT542217 IRS1 insulin receptor substrate 1 2 4
MIRT542225 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 6
MIRT543654 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT544097 EDA2R ectodysplasin A2 receptor 2 2
MIRT544533 SPPL3 signal peptide peptidase like 3 2 2
MIRT544954 TUB tubby bipartite transcription factor 2 4
MIRT545027 PLP1 proteolipid protein 1 2 2
MIRT546524 SERTAD3 SERTA domain containing 3 2 2
MIRT547242 OSBPL9 oxysterol binding protein like 9 2 4
MIRT548198 FNIP1 folliculin interacting protein 1 2 2
MIRT548272 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT549480 ACBD5 acyl-CoA binding domain containing 5 2 2
MIRT549498 ABI2 abl interactor 2 2 2
MIRT550325 SMAD9 SMAD family member 9 2 2
MIRT550563 CYP4V2 cytochrome P450 family 4 subfamily V member 2 2 6
MIRT550642 AR androgen receptor 2 2
MIRT550945 CTSE cathepsin E 2 4
MIRT550961 POT1 protection of telomeres 1 2 2
MIRT551178 ATP7A ATPase copper transporting alpha 2 2
MIRT551416 LRRC31 leucine rich repeat containing 31 2 2
MIRT551507 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 2 2
MIRT551517 MMADHC methylmalonic aciduria and homocystinuria, cblD type 2 2
MIRT551550 TMEM133 transmembrane protein 133 2 2
MIRT551757 TRIM42 tripartite motif containing 42 2 2
MIRT551872 TMEM47 transmembrane protein 47 2 2
MIRT551882 EPHA1 EPH receptor A1 2 2
MIRT551917 IGLON5 IgLON family member 5 2 2
MIRT552377 ZNF562 zinc finger protein 562 2 2
MIRT552543 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT553419 TRAF5 TNF receptor associated factor 5 2 2
MIRT554080 SNX4 sorting nexin 4 2 4
MIRT554588 RRAGC Ras related GTP binding C 2 2
MIRT554887 RCC2 regulator of chromosome condensation 2 2 2
MIRT555568 PLCB1 phospholipase C beta 1 2 2
MIRT555819 PCDH11Y protocadherin 11 Y-linked 2 4
MIRT555969 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT556028 MXD1 MAX dimerization protein 1 2 2
MIRT556206 MBNL2 muscleblind like splicing regulator 2 2 2
MIRT556251 MARCH3 membrane associated ring-CH-type finger 3 2 2
MIRT557265 HMGN3 high mobility group nucleosomal binding domain 3 2 2
MIRT557334 HHIP hedgehog interacting protein 2 2
MIRT557427 GXYLT2 glucoside xylosyltransferase 2 2 4
MIRT557537 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT557797 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT557805 FOXP1 forkhead box P1 2 2
MIRT558569 CRIM1 cysteine rich transmembrane BMP regulator 1 2 2
MIRT558734 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT558878 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT558933 CBX1 chromobox 1 2 2
MIRT559133 BTG3 BTG anti-proliferation factor 3 2 4
MIRT559168 BRWD3 bromodomain and WD repeat domain containing 3 2 4
MIRT559618 AMER1 APC membrane recruitment protein 1 2 2
MIRT561627 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT561971 LRRC59 leucine rich repeat containing 59 2 2
MIRT563049 ZNF138 zinc finger protein 138 2 2
MIRT563432 TRIM13 tripartite motif containing 13 2 4
MIRT563540 RBM41 RNA binding motif protein 41 2 2
MIRT564647 ZNF544 zinc finger protein 544 2 2
MIRT567674 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT567755 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT568267 BICD2 BICD cargo adaptor 2 2 2
MIRT569160 SIGMAR1 sigma non-opioid intracellular receptor 1 2 2
MIRT569179 DMD dystrophin 2 2
MIRT569427 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT569853 RGS5 regulator of G protein signaling 5 2 2
MIRT570554 PLAG1 PLAG1 zinc finger 2 2
MIRT571233 SYT9 synaptotagmin 9 2 2
MIRT572276 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT572539 ZFHX2 zinc finger homeobox 2 2 2
MIRT574271 ZNF350 zinc finger protein 350 2 2
MIRT574428 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT574671 HNRNPDL heterogeneous nuclear ribonucleoprotein D like 2 2
MIRT576699 Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 2
MIRT607889 SATB1 SATB homeobox 1 2 2
MIRT608846 FGF14 fibroblast growth factor 14 2 6
MIRT608854 SPATA6 spermatogenesis associated 6 2 2
MIRT608879 CNTF ciliary neurotrophic factor 2 6
MIRT608899 ZNF860 zinc finger protein 860 2 2
MIRT608948 C12orf60 chromosome 12 open reading frame 60 2 2
MIRT609029 CDH6 cadherin 6 2 2
MIRT609063 LPP LIM domain containing preferred translocation partner in lipoma 2 4
MIRT612277 ZNF280B zinc finger protein 280B 2 2
MIRT612520 SEPT7 septin 7 2 2
MIRT617202 GREM1 gremlin 1, DAN family BMP antagonist 2 2
MIRT618700 KIF13A kinesin family member 13A 2 2
MIRT619141 AFF2 AF4/FMR2 family member 2 2 2
MIRT621071 RAB11FIP3 RAB11 family interacting protein 3 2 6
MIRT627811 PTCHD1 patched domain containing 1 2 4
MIRT641782 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT657645 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT669313 C16orf72 chromosome 16 open reading frame 72 2 2
MIRT674602 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 2
MIRT684064 CPPED1 calcineurin like phosphoesterase domain containing 1 2 2
MIRT685149 TACR3 tachykinin receptor 3 2 2
MIRT693446 PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma 2 2
MIRT693808 WDR3 WD repeat domain 3 2 2
MIRT703845 ETV3 ETS variant 3 2 2
MIRT707100 ZNF850 zinc finger protein 850 2 2
MIRT707375 SVIP small VCP interacting protein 2 2
MIRT707467 ROCK2 Rho associated coiled-coil containing protein kinase 2 2 2
MIRT707514 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT707542 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT707560 CLVS2 clavesin 2 2 2
MIRT708113 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT708217 ADD2 adducin 2 2 2
MIRT710678 MX2 MX dynamin like GTPase 2 2 2
MIRT755898 ZFPM2-AS1 ZFPM2 antisense RNA 1 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-511-3p Doxorubicin 31703 NSC123127 approved resistant High Anaplastic Thyroid Cancer tissue
hsa-miR-511-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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