Gene Symbol |
ZNF268
|
Synonyms |
HZF3 |
Description |
zinc finger protein 268 |
Transcript |
NM_001165887
|
Other Transcripts |
NM_001165882
,
NM_001165881
,
NM_001165884
,
NM_001165885
,
NM_001165886
,
NM_001165883
,
NM_003415
,
NM_152943
|
Expression |
|
Putative miRNA Targets on ZNF268 |
|
3'UTR of ZNF268 (miRNA target sites are highlighted) |
>ZNF268|NM_001165887|3'UTR
1 TGATCTTATGGATTGGCATCAGGAAAATAAAGACAAGCTGGGAAGTACGGCAAAAAGCTTTGAATGCACTACATTTGGAA
81 AACTATGTCTTCTTAGTACAAAGTATCTTTCAAGACAAAAACCTCATAAATGTGGCACGCATGGAAAGAGTTTGAAATAT
161 ATAGATTTCACTAGTGATTATGCTAGAAATAATCCTAATGGGTTTCAGGTACATGGAAAATCATTCTTCCATTCTAAACA
241 TGAGCAAACTGTTATTGGAATAAAATACTGTGAAAGTATTGAATCTGGAAAAACCGTCAATAAGAAATCGCAACTTATGT
321 GCCAACAAATGTATATGGGCGAAAAACCCTTTGGATGCAGCTGTTGTGAGAAAGCCTTCAGCAGCAAGTCATACCTTCTA
401 GTGCATCAGCAAACTCATGCCGAAGAGAAACCCTATGGTTGTAATGAATGTGGGAAAGACTTCAGTAGTAAATCATACCT
481 CATTGTACATCAGAGAATTCATACAGGAGAGAAACTACATGAATGCAGTGAATGCAGGAAAACATTCAGTTTCCATTCAC
561 AGCTTGTTATACATC AGAGAATTCACACAGGTGAGAATCCCTATGAGTGCTGTGAATGTGGGAAAGTCTTCAGTAGGAAA
641 GACCAGCTTGTTTCACACCAGAAAACTCATTCAGGACAGAAACCATATGTGTGTAATGAATGTGGGAAAGCTTTTGGTTT
721 AAAATCACAGCTCATTATACATGAAAGAATTCATACAGGAGAGAAACCATATGAATGCAATGAATGTCAGAAAGCCTTTA
801 ATACAAAGTCAAACCTTATGGTACATCAGAGAACCCATACAGGGGAGAAACCTTATGTTTGTAGTGATTGTGGAAAAGCC
881 TTTACATTCAAGTCACAGCTCATTGTACATCAGGGGATTCACACAGGAGTAAAGCCCTATGGGTGTATTCAGTGTGGTAA
961 AGGATTCAGTTTGAAATCACAGCTCATTGTACATCAGAGAAGTCACACAGGAATGAAACCTTATGTATGCAATGAATGTG
1041 GCAAAGCCTTCAGGAGCAAGTCATACCTTATTATACATACAAGGACTCATACAGGAGAAAAACTCCATGAATGCAACAAT
1121 TGTGGGAAAGCCTTCAGTTTTAAATCACAGCTCATTATACATCAGAGGATTCATACAGGAGAGAACCCCTATGAATGCCA
1201 TGAATGTGGGAAAGCCTTCAGTCGGAAATACCAGCTTATTTCACACCAGAGAACTCATGCAGGAGAGAAGCCTTATGAAT
1281 GCACCGACTGTGGAAAGGCTTTTGGTTTAAAGTCACAGCTTATTATACACCAGAGAACTCATACAGGGGAGAAACCATTT
1361 GAATGTAGTGAGTGTCAGAAAGCCTTTAATACAAAGTCAAACCTGATTGTACATCAGAGAACTCATACAGGAGAGAAACC
1441 CTATAGTTGTAATGAATGTGGAAAAGCCTTTACGTTCAAATCACAGCTCATTGTACATAAAGGAGTGCACACTGGAGTAA
1521 AACCCTATGGATGCAGTCAATGTGCAAAAACCTTTAGTTTGAAGTCCCAGCTCATTGTACATCAGAGAAGTCACACAGGA
1601 GTAAAACCATATGGATGCAGTGAGTGTGGGAAAGCCTTCAGGAGCAAGTCATACCTTATTATACATATGAGAACTCATAC
1681 AGGAGAGAAACCACATGAGTGCAGGGAATGCGGGAAATCCTTTAGTTTCAATTCACAACTCATTGTGCATCAGAGAATTC
1761 ACACAGGAGAAAATCCCTATGAATGCAGTGAATGTGGGAAAGCCTTTAATAGGAAAGACCAGCTCATTTCACATCAGCGA
1841 ACTCATGCAGGGGAAAAGCCTTATGGGTGCAGTGAATGTGGGAAAGCTTTTAGCAGCAAGTCATACCTAATTATACACAT
1921 GAGAACTCATTCAGGTGAAAAACCATATGAATGTAATGAATGTGGGAAAGCCTTCATTTGGAAATCACTACTCATTGTAC
2001 ATGAGCGAACTCATGCAGGGGTCAACCCTTATAAATGCAGTCAATGTGAGAAATCCTTCAGTGGGAAATTACGCCTTCTT
2081 GTACACCAGAGAATGCACACAAGAGAGAAACCATATGAATGCAGTGAGTGTGGAAAAGCCTTCATTAGGAATTCTCAACT
2161 CATTGTACATCAAAGAACTCATTCAGGAGAGAAACCCTATGGGTGCAATGAATGTGGGAAAACCTTCTCTCAAAAATCAA
2241 TTCTCAGTGCACATCAGAGAACACATACAGGAGAGAAGCCTTGTAAGTGCACTGAATGTGGGAAAGCCTTTTGTTGGAAG
2321 TCACAGCTCATTATGCATCAGAGAACTCATGTAGATGACAAACATTGATAATTTTACGAAACTCTGAAAAGTGGATTCAC
2401 AAGAGATAGAAACAATCATATATAAAGAGAAACTCTGTAAGTGGAATCATCTTGTCATCTTCCAGAAAACTCATACTGAA
2481 TAGAAACTTTATGAATGCACAGCATATGGAAAGGCATCCACAGAAAGCTGTTCTTTACATGCAAAAAGATAGTAGACAAT
2561 ACACAGGAAAACTGAATTTAGTAACCACTCTGAAAATTTTTAGCAGCAAGTCATACCTTTTTTTAAAAAGTTCATACAGG
2641 TGAGGAACCATGTTAAACGTTGTAAAGTCATTTTACTAAAATAAGATTCACAAAGAGGAAACTTCATGAACCAGATGAAT
2721 ATAGAATAGACTTCTTTGAAATTCATAGTTTACAGAATTTTAATGAGAGAAATTATTGAGCTAATGAATGGCAGAATTAA
2801 CAAAATTACAAACATTTTATGTATCGGAAGCATATACCTTGGAGGGACCATGCTATAAGGGAAAGTGTAAATCTAGAAAT
2881 GAGAAACCCCTAGGGAAAAAATATATATAGGAGTGAACATCTTATGAATGTACCAAATAAACCACAGCTGGACTGTTAAC
2961 CTCACCTTAGAAGCTTCATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAACCTGTTATTATATCTTAATATTAAT
3041 TTTGAAGAATTATTTCTTTTAGGAATCATTTTAAGAAATTTTATTCCAGGTGTTCCAAAATTTCAGGAAAAGGTTTGAGA
3121 AAATTCTCAATTATAAATAATAAGATACAGATTATTTCATTGTACAAGTGAATCTAGTAAGGAGGTTAAGAATAAGAAAT
3201 AACATCCCAGAGCCTACAGGGATATTTAGATATCTTCCTATGTGTACTACATAATATGAATTTTGCAGTTTGGCATTTTA
3281 CTTGCGAATGCCATATGTGAGACAAAAATCATCTTCCAGAGATTTCAGTATCTCTGATACTGACAATATCTCTGATATGA
3361 CAATATCATCTTCCAGAGATTTCTACTCTGCATACCAACATTGTTTCTTTGTGTCTTACCAAATGCAACTTGTTACTAGA
3441 ATATGACTTACTAAAAATGCATTTCCACACTGCAAACATTTTTTAGGGCTATCTTCTGCCCTTTGGAAGCAGTCTTGGCA
3521 GCAACCTCTTTAGTAATCAATATAAGGCACACTTCATGTGTTTGTGTAGCCTGGAATCTATTCTACCTTCACAGGTTAGA
3601 ACATCTTGATTTCCTCTTAACGAAACATTCCCTAACGGTGTATGTAGTCATGAGGGAACCACCATTCAAGATGCCCTGCT
3681 CAGGACTTGGCATGAGCACTATGGTCAGCTGAGGCTCAGAACTGTACATTGTTAATGGGTTTTTCAAGTTCAGAAAAGCA
3761 ACATGAGCTTTTGTTCTGTGGTAGCATGTTGATGTAATAAGTAGCTATTTCAATAGAGGTTCCCAGAACAGCTTTTGTTA
3841 CTGTCATTTTCTTAACTTTGTTCACTTGTCTTTTATTTTGAGCTATTGGGTGTGCTTTTAATACATTCCTTGTTTGATTG
3921 CATTAGCCATTGTGTATCTTTTGCATACAGCTTACTAAATCAGATGGCTTCAGAAATGGGTGGTAGAGGAGTAGGCAGAA
4001 ACTTGCAAGGATATGTGGATATTTGGAAATGGTTGTTTCCCAAGACAGGATGGAAGTCTTTTAAGCAAGAAACTTGGCCC
4081 ATGCTATGAAGTCATGAAATGAATTGTTGGCATCATGTGCTCACTGAGGCTTTGGGGAAATGGATAAGTTGTCATTGAAA
4161 AATTTTAAACAGAATTCTGGAGTGGTCAAGAGGGGAATGCTTTTGATACCCATGTATAACATGGAGAATAATGATCTTAA
4241 AACTTCAATTTAAGATTATGTGTCAGTGATACTACTTAGTTACATGTAGCTATAGAGTCACAGTGGTGAAAAACTCTGCC
4321 AGTTGCTTACTCACAAAGTTAGTTTTCTTCACTACCTCATCAGGTTTGTTATGTGAGTGGGCATTAATCTGGGAAGAGTG
4401 GGACCCTGCCAGTTAGATTAGGGCTATCTTGGAGGAATATGCGGATTCAATACTGCAAATATTTCTGAAACACCTTCTGC
4481 TTTGTACTCTATTAGATACCCAAAGAAATTTTCATCCTTGAAGCGGAGGAATTTAATGATACCTGAATGCCTAACTGTTG
4561 TATTCTGCTTATACAGAATCCAATCTCAAGATACTTGGGGTGAAGAATGATGATTCACAGAAGGGAAGGGACATCTTACA
4641 TAAACAAATAATCGCAGATACTTGCTAAAGTGTATCCCCCAATCTGGGAAATACTGTAAAGGTGTATATTATTATTGATG
4721 TACCAAAGAAGACAGAATAAATTCATAAGAGAAAGTTTATATTCAGTTTACTACTACCTAGGGTTAGATTTTAGTTTGTT
4801 GTTTTTTCAGATGCAAATCTACATGCAGCCTTGCCTGGTAGAAGCCAGAAGTGTTGACAGTATTGAGGACAGCACTCACA
4881 TACTGTGGGAAAGAATAATACTTGATTAGGACTTATTATTTAATGAAATGAAAATTTTACAAAACAGAAA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' agacaGAAAACGAUGUGUAa 5'
|| | |||||||
Target 5' catacCTAATTATACACATg 3'
|
1902 - 1921
|
143.00 |
-5.50 |
2
|
miRNA 3' agacagaaAACGAUGUGUAa 5'
|||:||:||||
Target 5' ttcacagcTTGTTATACATc 3'
|
556 - 575
|
140.00 |
-8.90 |
3
|
miRNA 3' agaCAGAA---AACGAUGUGUAa 5'
||| | || :||:||||
Target 5' caaGTCATACCTTATTATACATa 3'
|
1057 - 1079
|
137.00 |
-5.60 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|