pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol PNRC2   
Synonyms -
Description proline rich nuclear receptor coactivator 2
Transcript NM_017761   
Expression
Putative miRNA Targets on PNRC2
3'UTR of PNRC2
(miRNA target sites are highlighted)
>PNRC2|NM_017761|3'UTR
   1 AATAAGACAAATGTTTAAATTTAGTTATGTTCACGGATAGTTGTCAATTGGTCTGAAACAAATTCGCTAGGGAATCTATT
  81 TGTGTAGAACTAATTAATGTAAAAAAAATAGACCATCTCGTGTTGTGTGCACTGTGATATAATGGTAGTATCAGTGCAAC
 161 TTAAACTAATGATTGTACTTGATATTAAGTGTTCTCAACTGAGTAACTTTTAAGTGGAAACCAAGTTTAGATTTGGGGAG
 241 TGGTAAAGGAATCAGCTTTTTCTATTGTTAGGGGAAGACAGTAATTTATCATTCATGGACCAGTAGATTGTTGAAAGTTG
 321 GTGAATCGGATTATAAGCTTCTAGCTAACACAAGGATTCAGAATTAGGTAAACATCTGAAGGTTTAGTATATTAGAAACA
 401 CCCAAACCAGTAATATGCTAACCTGATGCACTGCTGAAAGAAAATGTGAATTTTTCGTAATAATTGCATTTTAGTGAATT
 481 GTACAGTGGGTGGAAAGGGCATTTGGAGCTCATTAGAATGAGACATAGTACACCCCAATGGCCCTGTTTATTAAATGTAG
 561 TGGATTAAGTGTCTGTCAACAAATACACCAAAACCATTTTTTATAGAAACAGTATTTAATGGTCACTCAATAGCTTTCAA
 641 AATACATTTTTGTATTACAGCACTGCACAAGCTATTCTAATAGTGCTCTGGCCTCATCATTCCTGCAAAGCTTGCTTTGG
 721 GGAGTTGGATAATGTGAAAATTTTAAGTACCTAGGGGAGAAAGAGCCATGTAAATATCTGTAATAAACTTGTAGCATATG
 801 TAAAGTTTTCTTGGCCTTTATCTTACAAAAATGGAGTATTTTAGTATGAATTTGCTGAATGTAAGACCGTGGACTGTTTT
 881 TTATAATATGGCCTAATTTTAAAGGTCCAAAATAACTTGTTTTTAAAGTTTGCCCTTGTGCTAAAGTGCCAGTGTATGTA
 961 TGTTATACTTGATTTGGTTGTAAACTATATTTCAAAGTAAACCCTAGTGTAATAAGTTTTATAACTAAAAAGGTTTAAGC
1041 TGCTAAAACTATTTTTAAGAGATGTGAAATGCAGTATGGGACTATCTTTTTTTCCTCCTCTAAGCCCAAAGATTAACTAG
1121 AGTCCCTCCAACCTTATAGATTGTTGGCTTTCACAATCTTATAACCTAGGATACAGGTAGTTTCGAGTATGGTGCCAGTG
1201 ATGTTTTGTTTTTGTTTGGTCAAGGGGTAGGTGCAACCCAATGGACCACTTATGCAAAAGATGTAAACTCTTGCATAATA
1281 CATTGATAACATGTTTTGCCAACTTTAAATGCTTAAACATAAGCGAAACCAGTAGCAAGTATGTGGGTCAGCTTAAAAAT
1361 TTTGATTGTTAATGCCCTATTTTCTAATTTGGCACCTCTTGATGCCTAAGCAGGTAAGCAGATGCCTAAGCTGTATTTCT
1441 CCAAATAAATCAAGATGAAGTACTGCCCAAGTTAAATATTGATAGCCTAAAGACAAGTTTATGTAGTACTTAATGTACAT
1521 GATATGAATGTGAAGCATAAAATTAAATAAAATTTTTCCCCATTGGCTTGGTTTTATTTTAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acUCUGUCCAAGUACGACGAUa 5'
            | | |||||:| ||||||| 
Target 5' ctAAAAAGGTTTAAGCTGCTAa 3'
1025 - 1046 172.00 -17.10
2
miRNA  3' acucUGUCCAAGUA--CGACGAUa 5'
              |: || |:||  ||| ||| 
Target 5' gtgaATCGGATTATAAGCTTCTAg 3'
321 - 344 124.00 -7.00
3
miRNA  3' acUCUGUCCAAG----UACGACGAUa 5'
            ||::|| |||    ||| ||| | 
Target 5' acAGGTAGTTTCGAGTATGGTGCCAg 3'
1173 - 1198 106.00 -11.12
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31486733 20 COSMIC
COSN30132017 36 COSMIC
COSN31486732 36 COSMIC
COSN32065755 38 COSMIC
COSN32065756 66 COSMIC
COSN20094518 164 COSMIC
COSN32062067 168 COSMIC
COSN8637893 760 COSMIC
COSN21802869 869 COSMIC
COSN31569887 1266 COSMIC
COSN31585100 1326 COSMIC
COSN26633467 1441 COSMIC
COSN30143006 1442 COSMIC
COSN29286941 1500 COSMIC
COSN20094533 1530 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1363442700 3 dbSNP
rs1002585507 4 dbSNP
rs759561879 8 dbSNP
rs771276986 9 dbSNP
rs1219338609 14 dbSNP
rs1289825920 20 dbSNP
rs1488308327 21 dbSNP
rs774755416 27 dbSNP
rs556708834 29 dbSNP
rs1436157197 30 dbSNP
rs752843058 35 dbSNP
rs756400323 36 dbSNP
rs3211051 38 dbSNP
rs1173232432 39 dbSNP
rs1440042027 41 dbSNP
rs1160285155 44 dbSNP
rs1486870246 46 dbSNP
rs765120866 48 dbSNP
rs750301556 49 dbSNP
rs1474477187 55 dbSNP
rs569144050 56 dbSNP
rs7368202 66 dbSNP
rs1156469495 68 dbSNP
rs1346496951 73 dbSNP
rs1311693440 77 dbSNP
rs1453895094 77 dbSNP
rs1373574405 79 dbSNP
rs1416540524 84 dbSNP
rs375238270 85 dbSNP
rs1293740932 88 dbSNP
rs1372314806 91 dbSNP
rs1223468656 96 dbSNP
rs1305167574 98 dbSNP
rs1279609989 101 dbSNP
rs201235780 101 dbSNP
rs1485017926 107 dbSNP
rs1213633448 108 dbSNP
rs1238466021 109 dbSNP
rs3211053 110 dbSNP
rs1375603400 112 dbSNP
rs1439865363 114 dbSNP
rs1172548131 120 dbSNP
rs1373080060 120 dbSNP
rs1238331152 121 dbSNP
rs1436555691 121 dbSNP
rs1439779646 126 dbSNP
rs1299608253 130 dbSNP
rs960759334 132 dbSNP
rs1375800871 133 dbSNP
rs1241148726 140 dbSNP
rs368096122 141 dbSNP
rs1348384859 142 dbSNP
rs1345792257 143 dbSNP
rs1237201394 144 dbSNP
rs1279991145 146 dbSNP
rs1437710314 149 dbSNP
rs991980975 150 dbSNP
rs1234892523 154 dbSNP
rs1457980241 156 dbSNP
rs1212693938 159 dbSNP
rs201521381 159 dbSNP
rs1192593625 160 dbSNP
rs199913886 162 dbSNP
rs758930694 162 dbSNP
rs760138914 162 dbSNP
rs142213874 163 dbSNP
rs769098206 163 dbSNP
rs1441709873 167 dbSNP
rs1172602327 168 dbSNP
rs375888290 174 dbSNP
rs1408072834 179 dbSNP
rs1172348567 185 dbSNP
rs919081977 186 dbSNP
rs1437241550 197 dbSNP
rs950731043 202 dbSNP
rs1369002543 208 dbSNP
rs1443226064 227 dbSNP
rs113450395 228 dbSNP
rs1275454075 232 dbSNP
rs572741113 241 dbSNP
rs1339311893 244 dbSNP
rs1213319706 249 dbSNP
rs1275612049 250 dbSNP
rs1318999091 257 dbSNP
rs1213414377 262 dbSNP
rs1250773112 265 dbSNP
rs1177675917 270 dbSNP
rs1198953538 271 dbSNP
rs540367512 274 dbSNP
rs984724798 277 dbSNP
rs1474421168 278 dbSNP
rs1169561321 279 dbSNP
rs879142073 280 dbSNP
rs1424125975 281 dbSNP
rs909086181 285 dbSNP
rs376601694 286 dbSNP
rs1162469945 297 dbSNP
rs1407228646 305 dbSNP
rs1324361724 314 dbSNP
rs1325907605 318 dbSNP
rs1429289334 319 dbSNP
rs369387860 322 dbSNP
rs558666939 328 dbSNP
rs1038703594 329 dbSNP
rs1233069080 333 dbSNP
rs201658893 336 dbSNP
rs1336575423 338 dbSNP
rs1283007204 341 dbSNP
rs923046058 342 dbSNP
rs879007383 344 dbSNP
rs1263846764 351 dbSNP
rs576986974 355 dbSNP
rs1185539700 367 dbSNP
rs1419756689 372 dbSNP
rs1473931086 374 dbSNP
rs1164017493 379 dbSNP
rs1384474737 388 dbSNP
rs1051304836 400 dbSNP
rs1361734514 404 dbSNP
rs1414698454 408 dbSNP
rs1291883471 411 dbSNP
rs1342616096 416 dbSNP
rs1330138674 421 dbSNP
rs1245123055 437 dbSNP
rs1402600989 445 dbSNP
rs200223599 447 dbSNP
rs1348043202 450 dbSNP
rs1206393813 451 dbSNP
rs1485342250 453 dbSNP
rs1208625523 457 dbSNP
rs1180762183 458 dbSNP
rs1424209808 458 dbSNP
rs892639903 458 dbSNP
rs1363451391 460 dbSNP
rs1010114899 462 dbSNP
rs1160599217 464 dbSNP
rs1380981903 469 dbSNP
rs1434691060 477 dbSNP
rs1311564487 480 dbSNP
rs1404936475 482 dbSNP
rs1043996402 484 dbSNP
rs1333628943 488 dbSNP
rs1241867675 490 dbSNP
rs1309427925 497 dbSNP
rs1346492184 503 dbSNP
rs1231385293 508 dbSNP
rs1282412089 510 dbSNP
rs904079710 512 dbSNP
rs1195011646 514 dbSNP
rs1002232993 518 dbSNP
rs1436343975 522 dbSNP
rs1180717071 524 dbSNP
rs1238914169 526 dbSNP
rs1171797450 528 dbSNP
rs1453907538 528 dbSNP
rs1379898020 529 dbSNP
rs1466944505 539 dbSNP
rs1167766189 558 dbSNP
rs1394769585 560 dbSNP
rs1448598684 562 dbSNP
rs1331652326 566 dbSNP
rs753174590 570 dbSNP
rs1272804701 585 dbSNP
rs1302675695 587 dbSNP
rs1312767440 589 dbSNP
rs1226580774 590 dbSNP
rs1249450681 595 dbSNP
rs1319696728 606 dbSNP
rs1199000311 611 dbSNP
rs1258975865 613 dbSNP
rs1468161777 616 dbSNP
rs1191837360 623 dbSNP
rs1269553874 632 dbSNP
rs1033625857 634 dbSNP
rs1193076919 635 dbSNP
rs1371744480 638 dbSNP
rs1467529771 644 dbSNP
rs1171760409 647 dbSNP
rs1393283564 668 dbSNP
rs960811330 669 dbSNP
rs763151968 672 dbSNP
rs1294830816 681 dbSNP
rs1367665287 686 dbSNP
rs1381617394 690 dbSNP
rs1043880 691 dbSNP
rs1342245048 699 dbSNP
rs1219029308 707 dbSNP
rs1272243930 715 dbSNP
rs751788978 719 dbSNP
rs1334524691 726 dbSNP
rs1219630725 730 dbSNP
rs1267356841 731 dbSNP
rs1488831356 734 dbSNP
rs1204580045 736 dbSNP
rs1261669901 737 dbSNP
rs1479050575 742 dbSNP
rs1194930671 744 dbSNP
rs1417571599 748 dbSNP
rs1166430108 754 dbSNP
rs1474046830 754 dbSNP
rs1350065772 757 dbSNP
rs1452460737 758 dbSNP
rs1286554135 760 dbSNP
rs1362385984 764 dbSNP
rs1400534962 767 dbSNP
rs1292511989 769 dbSNP
rs1353307707 771 dbSNP
rs1226863266 775 dbSNP
rs1315145919 776 dbSNP
rs1322492857 777 dbSNP
rs1238425991 778 dbSNP
rs1283965956 779 dbSNP
rs1489589337 781 dbSNP
rs1217957067 782 dbSNP
rs1482497509 784 dbSNP
rs1183917041 790 dbSNP
rs1414088321 793 dbSNP
rs1418086171 799 dbSNP
rs1156402572 808 dbSNP
rs1381613289 811 dbSNP
rs1420282589 823 dbSNP
rs1312168662 832 dbSNP
rs1373509389 845 dbSNP
rs1449966942 849 dbSNP
rs1380253680 858 dbSNP
rs1223418111 861 dbSNP
rs1307232972 861 dbSNP
rs878956676 869 dbSNP
rs1280265002 870 dbSNP
rs1310902141 875 dbSNP
rs1212692991 878 dbSNP
rs1238410776 881 dbSNP
rs1480141581 885 dbSNP
rs1176373779 886 dbSNP
rs1239509076 890 dbSNP
rs1439809438 893 dbSNP
rs1172423220 906 dbSNP
rs1422977313 908 dbSNP
rs1416096031 916 dbSNP
rs1176597180 917 dbSNP
rs1353684878 931 dbSNP
rs1441800861 933 dbSNP
rs1329594807 935 dbSNP
rs1447631907 938 dbSNP
rs1302682265 939 dbSNP
rs1366202011 942 dbSNP
rs1221427768 945 dbSNP
rs1279842170 950 dbSNP
rs1307252485 955 dbSNP
rs1197098043 958 dbSNP
rs1259618597 972 dbSNP
rs1457880643 985 dbSNP
rs1026316323 986 dbSNP
rs1244461592 988 dbSNP
rs1478995932 990 dbSNP
rs1191669479 991 dbSNP
rs1418649661 995 dbSNP
rs1463886373 996 dbSNP
rs950585272 997 dbSNP
rs1323047561 1004 dbSNP
rs1402739867 1004 dbSNP
rs985000274 1005 dbSNP
rs1275995499 1010 dbSNP
rs1439270446 1010 dbSNP
rs1361814032 1011 dbSNP
rs1217200733 1013 dbSNP
rs1280483442 1015 dbSNP
rs1318226293 1028 dbSNP
rs1212657349 1034 dbSNP
rs1287179363 1038 dbSNP
rs1452860609 1039 dbSNP
rs1221593691 1040 dbSNP
rs1241457937 1041 dbSNP
rs1476763645 1041 dbSNP
rs1195665815 1044 dbSNP
rs1424060468 1050 dbSNP
rs1478301722 1052 dbSNP
rs1162859569 1057 dbSNP
rs1388797694 1058 dbSNP
rs1407178330 1062 dbSNP
rs1324223946 1063 dbSNP
rs1360519001 1071 dbSNP
rs1398679569 1080 dbSNP
rs1300485002 1082 dbSNP
rs1341486137 1085 dbSNP
rs1233009341 1086 dbSNP
rs1016207620 1087 dbSNP
rs1282087799 1087 dbSNP
rs545631768 1087 dbSNP
rs1228398557 1094 dbSNP
rs1282939995 1096 dbSNP
rs1218682704 1098 dbSNP
rs1487302898 1098 dbSNP
rs1263689612 1105 dbSNP
rs1485240688 1108 dbSNP
rs1185082459 1114 dbSNP
rs1366951564 1123 dbSNP
rs1473861452 1130 dbSNP
rs1163966297 1134 dbSNP
rs1379742198 1135 dbSNP
rs1456084356 1138 dbSNP
rs1300621485 1142 dbSNP
rs1361674230 1156 dbSNP
rs1395818193 1163 dbSNP
rs964975131 1167 dbSNP
rs1341966351 1168 dbSNP
rs1448287350 1169 dbSNP
rs1307963925 1171 dbSNP
rs1350828646 1179 dbSNP
rs1241633604 1185 dbSNP
rs1197409094 1186 dbSNP
rs1346990914 1190 dbSNP
rs1198521593 1201 dbSNP
rs1257991903 1202 dbSNP
rs550685505 1204 dbSNP
rs1455259550 1205 dbSNP
rs1237755934 1209 dbSNP
rs563830626 1211 dbSNP
rs922931458 1212 dbSNP
rs1232826941 1215 dbSNP
rs1465973079 1217 dbSNP
rs1171253689 1223 dbSNP
rs932934679 1226 dbSNP
rs988567458 1228 dbSNP
rs912944941 1230 dbSNP
rs369821385 1244 dbSNP
rs1448373295 1245 dbSNP
rs1309275765 1253 dbSNP
rs1044264436 1254 dbSNP
rs904134221 1261 dbSNP
rs1345491095 1263 dbSNP
rs938256852 1265 dbSNP
rs1257676061 1268 dbSNP
rs1456557615 1272 dbSNP
rs1055085657 1276 dbSNP
rs1238849637 1280 dbSNP
rs896491198 1291 dbSNP
rs1197334764 1299 dbSNP
rs1379839314 1304 dbSNP
rs1013505624 1319 dbSNP
rs1170346046 1320 dbSNP
rs1026369051 1326 dbSNP
rs569361477 1333 dbSNP
rs1331495412 1334 dbSNP
rs1389345262 1336 dbSNP
rs1384523010 1337 dbSNP
rs1006084005 1340 dbSNP
rs1331552786 1354 dbSNP
rs1217790167 1360 dbSNP
rs1330685237 1360 dbSNP
rs1016505778 1362 dbSNP
rs1316355006 1362 dbSNP
rs1252008568 1375 dbSNP
rs1488215893 1380 dbSNP
rs964699529 1382 dbSNP
rs1270117263 1390 dbSNP
rs1434197757 1391 dbSNP
rs1193484777 1394 dbSNP
rs1421921867 1396 dbSNP
rs1478619881 1397 dbSNP
rs1170983528 1398 dbSNP
rs1367477525 1399 dbSNP
rs1294706297 1401 dbSNP
rs974661588 1401 dbSNP
rs1030219900 1406 dbSNP
rs1321828674 1407 dbSNP
rs1399307810 1407 dbSNP
rs1217979620 1409 dbSNP
rs954375264 1415 dbSNP
rs1218973671 1417 dbSNP
rs988452867 1426 dbSNP
rs1321291631 1430 dbSNP
rs1242711043 1438 dbSNP
rs1267302670 1441 dbSNP
rs1490673821 1443 dbSNP
rs1216480910 1445 dbSNP
rs757291691 1446 dbSNP
rs1261601035 1454 dbSNP
rs913003794 1455 dbSNP
rs1187409214 1464 dbSNP
rs1255053745 1468 dbSNP
rs111991512 1480 dbSNP
rs1368516038 1484 dbSNP
rs925439638 1494 dbSNP
rs938140147 1495 dbSNP
rs1362329063 1513 dbSNP
rs1400398078 1514 dbSNP
rs186671270 1515 dbSNP
rs1217495681 1519 dbSNP
rs1378808479 1519 dbSNP
rs1273330585 1522 dbSNP
rs1315002098 1524 dbSNP
rs147858858 1525 dbSNP
rs67992540 1525 dbSNP
rs1489173009 1527 dbSNP
rs201192474 1530 dbSNP
rs201677504 1531 dbSNP
rs1055309241 1532 dbSNP
rs896711867 1536 dbSNP
rs1207741576 1540 dbSNP
rs1482098983 1543 dbSNP
rs759333702 1544 dbSNP
rs1176171674 1545 dbSNP
rs1243334457 1545 dbSNP
rs949403996 1545 dbSNP
rs1451417628 1548 dbSNP
rs1420230294 1551 dbSNP
rs1175170432 1553 dbSNP
rs936871124 1554 dbSNP
rs1426418217 1555 dbSNP
rs1467350862 1556 dbSNP
rs1053892951 1557 dbSNP
rs1446131505 1560 dbSNP
rs1477096664 1563 dbSNP
rs895362271 1564 dbSNP
rs1012500181 1566 dbSNP
rs1224803981 1571 dbSNP
rs1418757293 1572 dbSNP
rs1310844205 1582 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 55629.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acUCUGUCCAAGUACGACGAUa 5'
            | | |||||:| ||||||| 
Target 5' cuAAAAAGGUUUAAGCUGCUAa 3'
7 - 28
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000334351.7 | 3UTR | UUAUAACUAAAAAGGUUUAAGCUGCUAAAACUAUUUUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

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