miRTarBase - #MIRT187490


—
pre-miRNA Information
pre-miRNA hsa-mir-4796   
Genomic Coordinates chr3: 114743445 - 114743525
Description Homo sapiens miR-4796 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4796-3p
Sequence 53| UAAAGUGGCAGAGUAUAGACAC |74
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN9734363 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1045223845 8 dbSNP
rs185555286 18 dbSNP
Putative Targets

Gene Information
Gene Symbol PCBP2   
Synonyms HNRNPE2, HNRPE2, hnRNP-E2
Description poly(rC) binding protein 2
Transcript NM_001098620   
Other Transcripts NM_001128911 , NM_001128912 , NM_001128913 , NM_001128914 , NM_005016 , NM_031989   
Expression
Putative miRNA Targets on PCBP2
3'UTR of PCBP2
(miRNA target sites are highlighted)		 
>PCBP2|NM_001098620|3'UTR
   1 AACAATGCAGATTCATCCATAATCCCTTTCTGCTGTTCACCACCACCCATGATCCATCTGTGTAGTTTCTGAACAGTCAG
  81 CGATTCCAGGTTTTAAATAGTTTGTAAATTTTCAGTTTCTACACACTTTATCATCCACTCGTGATTTTTTAATTAAAGCG
 161 TTTTAATTCCTTTCTCTGTTCAGCTGTTGATGCTGAGATCCATATTTAGTTTTATAAGCTTCTCCCTGGTTTTTTTTTTT
 241 TGGCTCATGAATTTTTCTGTTTGTCATGGAAATGTAAGAGTGGAATATTAATACATTTCAGTTTAGTTCTGTAATGTCAG
 321 GAATTTTTCAAAAAAATTAAAAGATGGACTGGAGCTTTTTCTTTGTGAATAGAAACTGGATGCCACAGTGATTCATGTGG
 401 GTTTTATTCCTCTTGTCTTGCTGTTATTTTTGTACCTTTTATCCCTCAAAGGACCCTTCTTGGGTTTTGAATGGAAGCCT
 481 TTATTCCGGTTAAGATGTTTTCTTCTATTTTACCACTTCCATCTTTTTTTGTGGCCCTCGATCCTATTTTTCCCTGACTC
 561 CATGCTTGGTTGGCCCTTATAAAACTTGTGCCCAAAAGATTGAGGATTAGACTTTCCGAGGACTTACCTGTCCTAGGGGA
 641 GTAGGCAAGCACTTCCACTAGGGAGGGGGTGGGGGAAAGGAATGACACATGACATACATGGCATACACATTAAGCAGTTG
 721 ATCATATGTCTGACTGGGTTCCAGTTTCTTGGGAATGTTGGTCCCCTTGTTCAGGCTTGCATATTTTAAACTAAAAATTT
 801 CAGTCTATTGTTTTTAGTAACTTCATTTATAGTCCTCCATAACAAGTTAGAAGGATGTATCTGCTACCATTTATTCCTAT
 881 AATTTTAGAAAGTTGGGGCTTGACATTATACTCATTTAGTGAGAGTAGATGCAAAAAAGTGGAGGGGCAGGAGAACTTCT
 961 CCAGACACCTCAGATAAAGTCCGGAGCCCAAGGCTTTATCTTAACCATGTATGGTACCCCATTCATTCATCAAGAAAACC
1041 CTCAACAGCTGGGCCTGCATGGAGTGTTATATTTCAAGGTTTTTCACAGGGGTTACAGTAGGACAGTCCCCACCCCAATC
1121 AGGCACCAGGATAAAAGCAGGGACTTAAACAGCACCCCGGTTCTTCAGCCTGAGCCATCACATGCTATCAGTCTCCTAAC
1201 CTCCCCCTGGGCCTTAAGACAGGGCTTGGGCAGAGAAGATAAATGGTGGGACAAAAAAATGAGTTACATTGCCACCTGAG
1281 AAACCTCAGAGGGGAGGACCCAGCCTTAGCCTCCCTCCTCCCAAGTGCAAAATGTGTAAACAGAGTAAACGGAACAGAAA
1361 AGTGCAGTCTAAGTGGTTTTCTCTCCTGCCCCTCCCACCGCCCCTCCCCCCACCCCCTATTATTTGGGGATAAAGAATAT
1441 AAAGACAACCCTGGCTTTTCTATTGCCTTGTTGCTTGCTGAATATAAGGAATGGGGTGGGGCAGGAAGGGGCTTGCCCTT
1521 AGCCACAGCTCTACGGCTGTGCCTCATTCATTTCCACAGCTGCCAGTGTCCCTAGAGTTTATCAGGTGAATTGGTCAGGG
1601 GATCAGTCTCCCTCGAGCCTGACTTACGGCTGGGACAGCCCCATCTTTCTGTTGATTATGTGGCGCATATATATATATAT
1681 ATGTATATATATATAATTTATATAAATATTTCTCTATGTAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cacAG-AUAUGAGACGGUGAAau 5'
             || | ||:|:| ||||||  
Target 5' tttTCTTCTATTTTACCACTTcc 3'
 498 - 520 143.00 -10.60
2 
miRNA  3' cacAGAUAUGAGACG-GUGAAAu 5'
             || :| :||| | |||||| 
Target 5' tttTCAGT-TTCTACACACTTTa 3'
 109 - 130 126.00 -8.60
3 
miRNA  3' caCAGAUAUGA--GACGGUGAAAu 5'
            ||||: |||   | ||| ||| 
Target 5' atGTCTG-ACTGGGTTCCAGTTTc 3'
 726 - 748 125.00 -11.40
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30191701 19 COSMIC
COSN1576488 35 COSMIC
COSN30157429 45 COSMIC
COSN31500669 52 COSMIC
COSN30527522 53 COSMIC
COSN30466427 56 COSMIC
COSN31578321 83 COSMIC
COSN26648241 89 COSMIC
COSN26642648 160 COSMIC
COSN26573772 224 COSMIC
COSN20092577 230 COSMIC
COSN30122264 307 COSMIC
COSN30120269 338 COSMIC
COSN27627386 373 COSMIC
COSN31561688 1132 COSMIC
COSN31531034 1138 COSMIC
COSN31541841 1159 COSMIC
COSN31540763 1169 COSMIC
COSN31480960 1288 COSMIC
COSN31522840 1352 COSMIC
COSN31541007 1393 COSMIC
COSN22173571 1445 COSMIC
COSN27616663 1636 COSMIC
COSN31489431 1646 COSMIC
COSN23121745 1682 COSMIC
COSN31483080 1682 COSMIC
COSN27923114 1683 COSMIC
COSN30116265 1684 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1347179194 6 dbSNP
rs749359484 7 dbSNP
rs756411445 11 dbSNP
rs779018882 13 dbSNP
rs748462417 17 dbSNP
rs772280779 20 dbSNP
rs773035048 23 dbSNP
rs746780534 26 dbSNP
rs1375883867 27 dbSNP
rs1281702721 28 dbSNP
rs1048933 31 dbSNP
rs776594578 32 dbSNP
rs1362002520 35 dbSNP
rs534994889 38 dbSNP
rs1434906325 41 dbSNP
rs919637703 43 dbSNP
rs758976574 47 dbSNP
rs1391962645 50 dbSNP
rs1244238766 57 dbSNP
rs749680288 59 dbSNP
rs1446854622 60 dbSNP
rs1443127317 61 dbSNP
rs11556928 70 dbSNP
rs541977573 84 dbSNP
rs1048413361 89 dbSNP
rs1323101097 90 dbSNP
rs1403861883 91 dbSNP
rs1177204607 97 dbSNP
rs1158996846 98 dbSNP
rs1438869654 99 dbSNP
rs1407690320 102 dbSNP
rs952533039 104 dbSNP
rs1195458022 115 dbSNP
rs982603117 126 dbSNP
rs1454309418 129 dbSNP
rs1006176691 130 dbSNP
rs1218914553 133 dbSNP
rs1400990917 133 dbSNP
rs908497416 134 dbSNP
rs1033593309 139 dbSNP
rs4790 141 dbSNP
rs1353464115 142 dbSNP
rs188022418 145 dbSNP
rs1025198302 149 dbSNP
rs1046174315 151 dbSNP
rs1371789635 158 dbSNP
rs1468782932 160 dbSNP
rs1337339684 161 dbSNP
rs1347115315 172 dbSNP
rs112273797 179 dbSNP
rs543040122 182 dbSNP
rs966502667 183 dbSNP
rs113004540 184 dbSNP
rs1444446168 187 dbSNP
rs1278794195 188 dbSNP
rs1435333940 193 dbSNP
rs1423854159 195 dbSNP
rs1373779565 196 dbSNP
rs937313727 197 dbSNP
rs564890955 201 dbSNP
rs1224544538 210 dbSNP
rs1476117864 216 dbSNP
rs1286532799 218 dbSNP
rs978234410 219 dbSNP
rs1302540345 225 dbSNP
rs200793935 226 dbSNP
rs151135231 227 dbSNP
rs202078259 227 dbSNP
rs1314569224 229 dbSNP
rs1355702622 230 dbSNP
rs867375531 230 dbSNP
rs1218246642 231 dbSNP
rs879244280 231 dbSNP
rs957701305 232 dbSNP
rs1203071583 233 dbSNP
rs1354593855 233 dbSNP
rs1165221889 234 dbSNP
rs1285576235 234 dbSNP
rs1263799848 235 dbSNP
rs1239329066 236 dbSNP
rs1463089198 236 dbSNP
rs1275235575 237 dbSNP
rs1203022471 240 dbSNP
rs1232734187 241 dbSNP
rs55730102 242 dbSNP
rs1338981660 243 dbSNP
rs200103362 243 dbSNP
rs1470680385 244 dbSNP
rs866749752 244 dbSNP
rs1178592762 245 dbSNP
rs1422564855 247 dbSNP
rs1296926844 248 dbSNP
rs1479885810 248 dbSNP
rs1176580980 249 dbSNP
rs1407635671 250 dbSNP
rs1464058784 251 dbSNP
rs1219496784 252 dbSNP
rs1328019271 254 dbSNP
rs1354908195 255 dbSNP
rs765863610 256 dbSNP
rs1281523292 257 dbSNP
rs1343917265 258 dbSNP
rs1223111602 259 dbSNP
rs1284069697 260 dbSNP
rs1325758917 264 dbSNP
rs1194593050 266 dbSNP
rs985055164 267 dbSNP
rs911483344 275 dbSNP
rs1207022211 279 dbSNP
rs1308460952 289 dbSNP
rs1267179657 296 dbSNP
rs1443873734 300 dbSNP
rs1396085764 319 dbSNP
rs944259171 330 dbSNP
rs1490100054 336 dbSNP
rs1349660887 337 dbSNP
rs1199688895 338 dbSNP
rs1163045228 339 dbSNP
rs1055806273 348 dbSNP
rs1049190 349 dbSNP
rs11556927 362 dbSNP
rs11556926 366 dbSNP
rs1430789865 368 dbSNP
rs1381423382 384 dbSNP
rs1474106768 393 dbSNP
rs1437868472 394 dbSNP
rs1255012336 398 dbSNP
rs1210643069 402 dbSNP
rs1488314682 406 dbSNP
rs1263905656 411 dbSNP
rs976966801 411 dbSNP
rs1217608320 413 dbSNP
rs1354174026 418 dbSNP
rs1308389823 421 dbSNP
rs918733376 423 dbSNP
rs1372524153 424 dbSNP
rs753221745 428 dbSNP
rs1364986681 437 dbSNP
rs930104232 437 dbSNP
rs1011741958 442 dbSNP
rs1048499744 444 dbSNP
rs1411562252 445 dbSNP
rs1158547971 448 dbSNP
rs888488589 453 dbSNP
rs937327412 460 dbSNP
rs1321398484 462 dbSNP
rs1199586747 465 dbSNP
rs1055768202 474 dbSNP
rs1041852461 479 dbSNP
rs1188537395 484 dbSNP
rs1488482717 484 dbSNP
rs1285117354 488 dbSNP
rs1214354409 489 dbSNP
rs903463600 490 dbSNP
rs1231833157 494 dbSNP
rs1309968494 499 dbSNP
rs1013895970 501 dbSNP
rs1024830958 503 dbSNP
rs1341504056 507 dbSNP
rs902338537 508 dbSNP
rs1008493750 510 dbSNP
rs1377737091 512 dbSNP
rs999324532 515 dbSNP
rs375556691 522 dbSNP
rs1225276332 524 dbSNP
rs1465572155 524 dbSNP
rs1376035227 536 dbSNP
rs532157979 541 dbSNP
rs957751523 544 dbSNP
rs1262749603 545 dbSNP
rs996481563 547 dbSNP
rs1486545026 552 dbSNP
rs1017873659 555 dbSNP
rs374105570 561 dbSNP
rs1481974824 564 dbSNP
rs1252612023 566 dbSNP
rs114883672 577 dbSNP
rs192059154 581 dbSNP
rs1015413763 589 dbSNP
rs1290122378 590 dbSNP
rs970936836 595 dbSNP
rs1217130661 596 dbSNP
rs982067081 605 dbSNP
rs1342666060 617 dbSNP
rs1335410613 618 dbSNP
rs1049193 619 dbSNP
rs937363940 626 dbSNP
rs984248831 626 dbSNP
rs1423129122 628 dbSNP
rs991448336 629 dbSNP
rs914683966 633 dbSNP
rs1444810144 636 dbSNP
rs1186732418 645 dbSNP
rs1440693647 651 dbSNP
rs1252579085 652 dbSNP
rs1191899745 659 dbSNP
rs947464111 660 dbSNP
rs1255717486 664 dbSNP
rs1215218215 667 dbSNP
rs1055820239 668 dbSNP
rs112536152 669 dbSNP
rs1041757370 685 dbSNP
rs1244526002 687 dbSNP
rs764613551 690 dbSNP
rs917218668 691 dbSNP
rs1242169324 692 dbSNP
rs903370184 698 dbSNP
rs747625898 699 dbSNP
rs1391177080 707 dbSNP
rs1162359893 710 dbSNP
rs1476385268 712 dbSNP
rs1382041596 719 dbSNP
rs1179210906 725 dbSNP
rs1438508898 730 dbSNP
rs1235879832 731 dbSNP
rs771734700 733 dbSNP
rs902390834 734 dbSNP
rs1209568008 735 dbSNP
rs1384386106 742 dbSNP
rs1425000444 753 dbSNP
rs147095410 765 dbSNP
rs996553324 767 dbSNP
rs1376241344 770 dbSNP
rs893576559 782 dbSNP
rs1026631464 783 dbSNP
rs1380718130 788 dbSNP
rs1317790800 789 dbSNP
rs1331836539 789 dbSNP
rs879140499 791 dbSNP
rs1403348685 808 dbSNP
rs541194618 808 dbSNP
rs117752385 814 dbSNP
rs1313480001 816 dbSNP
rs1159157372 818 dbSNP
rs1359201874 818 dbSNP
rs1378412912 832 dbSNP
rs998485729 835 dbSNP
rs1478083478 839 dbSNP
rs200749092 840 dbSNP
rs1247120416 846 dbSNP
rs779106261 849 dbSNP
rs138473400 856 dbSNP
rs1204173351 860 dbSNP
rs1217981461 868 dbSNP
rs552643895 870 dbSNP
rs1353528541 872 dbSNP
rs982316800 880 dbSNP
rs1220967067 883 dbSNP
rs1345843087 899 dbSNP
rs570822190 906 dbSNP
rs910025140 912 dbSNP
rs1342127101 913 dbSNP
rs1298513608 915 dbSNP
rs1399180332 920 dbSNP
rs1181693708 926 dbSNP
rs776474978 927 dbSNP
rs368137981 928 dbSNP
rs959265684 931 dbSNP
rs991481097 932 dbSNP
rs914590586 940 dbSNP
rs1185226743 942 dbSNP
rs1170436578 946 dbSNP
rs534662042 948 dbSNP
rs1451906305 949 dbSNP
rs1158210449 956 dbSNP
rs1194761710 957 dbSNP
rs977535587 967 dbSNP
rs1488179514 968 dbSNP
rs1240820431 972 dbSNP
rs547080417 974 dbSNP
rs112075383 979 dbSNP
rs924657715 983 dbSNP
rs944254950 984 dbSNP
rs1320197995 990 dbSNP
rs923868401 992 dbSNP
rs935226368 995 dbSNP
rs1458871021 1001 dbSNP
rs1041606396 1007 dbSNP
rs1382739772 1011 dbSNP
rs1448745686 1013 dbSNP
rs1453944058 1018 dbSNP
rs1331547243 1025 dbSNP
rs535672633 1029 dbSNP
rs1423830358 1030 dbSNP
rs932876007 1031 dbSNP
rs1169555229 1038 dbSNP
rs1006627720 1040 dbSNP
rs1417873269 1041 dbSNP
rs1184096554 1044 dbSNP
rs1334281674 1053 dbSNP
rs371564418 1054 dbSNP
rs759300083 1058 dbSNP
rs1237425728 1059 dbSNP
rs1039857881 1060 dbSNP
rs900880955 1064 dbSNP
rs1048647962 1067 dbSNP
rs764346831 1070 dbSNP
rs1279755015 1072 dbSNP
rs1352275221 1074 dbSNP
rs1314693528 1080 dbSNP
rs1201194138 1085 dbSNP
rs574540438 1088 dbSNP
rs998267356 1088 dbSNP
rs1461726087 1091 dbSNP
rs1378273340 1098 dbSNP
rs1205416848 1099 dbSNP
rs1248239565 1105 dbSNP
rs1418274837 1111 dbSNP
rs1003839873 1112 dbSNP
rs1463786093 1113 dbSNP
rs1353116784 1116 dbSNP
rs751811299 1119 dbSNP
rs906265908 1125 dbSNP
rs1003403833 1131 dbSNP
rs1473673544 1143 dbSNP
rs189795921 1150 dbSNP
rs959172979 1152 dbSNP
rs75238912 1159 dbSNP
rs1470591436 1160 dbSNP
rs1221962372 1164 dbSNP
rs1320921803 1165 dbSNP
rs757277705 1167 dbSNP
rs1242288629 1171 dbSNP
rs539744488 1180 dbSNP
rs1394854490 1181 dbSNP
rs1391155029 1185 dbSNP
rs977819149 1188 dbSNP
rs1369224478 1190 dbSNP
rs1293785342 1203 dbSNP
rs1307310677 1203 dbSNP
rs1349715036 1209 dbSNP
rs1162211983 1217 dbSNP
rs1351978146 1220 dbSNP
rs1381483415 1221 dbSNP
rs1422137572 1221 dbSNP
rs924760391 1223 dbSNP
rs991619529 1226 dbSNP
rs1417421322 1227 dbSNP
rs1269682741 1236 dbSNP
rs1024820022 1239 dbSNP
rs1488021139 1241 dbSNP
rs1266580105 1242 dbSNP
rs558124349 1245 dbSNP
rs1218697645 1246 dbSNP
rs1354244957 1246 dbSNP
rs1285237771 1247 dbSNP
rs1236203184 1250 dbSNP
rs971479111 1253 dbSNP
rs1301513587 1256 dbSNP
rs1323625089 1257 dbSNP
rs1225340067 1258 dbSNP
rs1385930903 1267 dbSNP
rs1345272308 1268 dbSNP
rs1301609400 1269 dbSNP
rs1402260234 1272 dbSNP
rs576783223 1277 dbSNP
rs976975044 1278 dbSNP
rs1451680298 1279 dbSNP
rs924616684 1285 dbSNP
rs1177038181 1286 dbSNP
rs1432886908 1287 dbSNP
rs935279515 1288 dbSNP
rs1196193075 1295 dbSNP
rs921445061 1297 dbSNP
rs1252345968 1299 dbSNP
rs989349850 1299 dbSNP
rs915114215 1301 dbSNP
rs932782578 1302 dbSNP
rs181128469 1305 dbSNP
rs1197455335 1306 dbSNP
rs1203370422 1318 dbSNP
rs1039504683 1319 dbSNP
rs900931977 1322 dbSNP
rs775547611 1330 dbSNP
rs1231900750 1336 dbSNP
rs910100119 1339 dbSNP
rs933729496 1342 dbSNP
rs1047190922 1351 dbSNP
rs559422217 1352 dbSNP
rs886758808 1353 dbSNP
rs1005839459 1359 dbSNP
rs1461882623 1366 dbSNP
rs1017202245 1371 dbSNP
rs1372730261 1380 dbSNP
rs1037087982 1386 dbSNP
rs1028511193 1388 dbSNP
rs1404118426 1390 dbSNP
rs769876333 1392 dbSNP
rs1013517567 1393 dbSNP
rs1422034034 1393 dbSNP
rs574564202 1394 dbSNP
rs1402794209 1397 dbSNP
rs879199685 1398 dbSNP
rs1425419705 1399 dbSNP
rs1003719857 1400 dbSNP
rs1259549665 1401 dbSNP
rs1459617509 1401 dbSNP
rs1054861011 1404 dbSNP
rs542080843 1405 dbSNP
rs1198934042 1406 dbSNP
rs1302137272 1406 dbSNP
rs1010661143 1408 dbSNP
rs769688377 1413 dbSNP
rs977520809 1413 dbSNP
rs1451967688 1414 dbSNP
rs1032124981 1416 dbSNP
rs1333604241 1418 dbSNP
rs1466399928 1418 dbSNP
rs1396050882 1420 dbSNP
rs1459273198 1422 dbSNP
rs1368948666 1425 dbSNP
rs1292774718 1428 dbSNP
rs957363975 1432 dbSNP
rs756637338 1437 dbSNP
rs915166186 1447 dbSNP
rs1022204611 1448 dbSNP
rs1178856903 1449 dbSNP
rs563462848 1450 dbSNP
rs1194387025 1461 dbSNP
rs372077831 1463 dbSNP
rs539524464 1471 dbSNP
rs922440886 1471 dbSNP
rs1357363371 1480 dbSNP
rs1311466660 1485 dbSNP
rs552502256 1486 dbSNP
rs1032076183 1489 dbSNP
rs369675508 1493 dbSNP
rs773167304 1494 dbSNP
rs1391252718 1497 dbSNP
rs1162840115 1501 dbSNP
rs1268419575 1503 dbSNP
rs886820635 1510 dbSNP
rs965378329 1512 dbSNP
rs375488980 1513 dbSNP
rs1038016077 1524 dbSNP
rs1193020149 1525 dbSNP
rs1453672062 1527 dbSNP
rs1259680353 1530 dbSNP
rs1428450855 1532 dbSNP
rs868758607 1534 dbSNP
rs763211929 1535 dbSNP
rs954199574 1536 dbSNP
rs999386091 1537 dbSNP
rs1350090577 1539 dbSNP
rs984279661 1546 dbSNP
rs1277986292 1551 dbSNP
rs879128347 1569 dbSNP
rs1331472071 1573 dbSNP
rs528499282 1574 dbSNP
rs1365843675 1578 dbSNP
rs1011545718 1581 dbSNP
rs1362329097 1588 dbSNP
rs1298765662 1591 dbSNP
rs1017534916 1594 dbSNP
rs1286625711 1597 dbSNP
rs963950890 1599 dbSNP
rs1037258857 1603 dbSNP
rs927639959 1612 dbSNP
rs1360583781 1615 dbSNP
rs184893901 1616 dbSNP
rs1265930964 1622 dbSNP
rs1218043524 1623 dbSNP
rs1299715883 1625 dbSNP
rs975341220 1626 dbSNP
rs1282333229 1627 dbSNP
rs375190621 1628 dbSNP
rs546648597 1629 dbSNP
rs982989778 1633 dbSNP
rs1342187282 1642 dbSNP
rs1278750108 1646 dbSNP
rs1430014610 1655 dbSNP
rs1343368540 1656 dbSNP
rs894891212 1658 dbSNP
rs538514732 1665 dbSNP
rs1043522843 1666 dbSNP
rs1240882465 1667 dbSNP
rs146607300 1667 dbSNP
rs774252371 1667 dbSNP
rs941067457 1667 dbSNP
rs1212274559 1668 dbSNP
rs1461853784 1669 dbSNP
rs1262716516 1671 dbSNP
rs1202064465 1674 dbSNP
rs1319731016 1676 dbSNP
rs1213787659 1678 dbSNP
rs1258391862 1678 dbSNP
rs1259039446 1680 dbSNP
rs1285913255 1680 dbSNP
rs902467015 1680 dbSNP
rs1381463392 1682 dbSNP
rs915568440 1682 dbSNP
rs999862149 1682 dbSNP
rs1334265512 1683 dbSNP
rs1018838665 1684 dbSNP
rs1171499281 1684 dbSNP
rs1400585957 1684 dbSNP
rs1466927268 1684 dbSNP
rs901172153 1686 dbSNP
rs1173680059 1690 dbSNP
rs1184154720 1691 dbSNP
rs764748536 1694 dbSNP
rs998160198 1695 dbSNP
rs1322100774 1697 dbSNP
rs1028443841 1699 dbSNP
rs1370914633 1701 dbSNP
rs1181830709 1703 dbSNP
rs780923322 1705 dbSNP
rs1311626463 1707 dbSNP
rs774850980 1708 dbSNP
rs1238650282 1710 dbSNP
rs1385731561 1711 dbSNP
rs762762184 1715 dbSNP
rs763809039 1717 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545212. RNA binding protein: AGO1. Condition:Control PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cacagauauGAGACG-GUGAAAu 5'
                   :||| | |||||| 
Target 5' --------uUUCUACACACUUUa 3'
 		1 - 15
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 5094.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065669. RNA binding protein: AGO1. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM545212
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / Control
Location of target site ENST00000455667.3 | 3UTR | UUUCUACACACUUUAUCAUCCACUCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000455667.3 | 3UTR | UUUCUACACACUUUAUCAUCCACUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1065669
Method / RBP PAR-CLIP / AGO1
Cell line / Condition HEK293 / 4-thiouridine, ML_MM_8
Location of target site ENST00000455667.3 | 3UTR | UUUCUACACACUUUAUCAUCCACUCG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
276 hsa-miR-4796-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057030 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT065682 ACVR1B activin A receptor type 1B 2 6
MIRT066973 ATXN7L3B ataxin 7 like 3B 2 2
MIRT068903 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT069713 FOXJ3 forkhead box J3 2 2
MIRT072259 B2M beta-2-microglobulin 2 10
MIRT074331 TNRC6A trinucleotide repeat containing 6A 2 10
MIRT075132 C16ORF70 chromosome 16 open reading frame 70 2 4
MIRT077079 KRT10 keratin 10 2 8
MIRT084604 BCL2L11 BCL2 like 11 2 8
MIRT088056 UBXN2A UBX domain protein 2A 2 4
MIRT103212 SP4 Sp4 transcription factor 2 6
MIRT108733 XIAP X-linked inhibitor of apoptosis 2 2
MIRT135263 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 8
MIRT140170 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT173042 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT182530 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT184890 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT187490 PCBP2 poly(rC) binding protein 2 2 4
MIRT188195 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT190442 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT201089 ZNF805 zinc finger protein 805 2 2
MIRT213239 REST RE1 silencing transcription factor 2 2
MIRT213335 KIAA0232 KIAA0232 2 2
MIRT220130 CAV1 caveolin 1 2 2
MIRT257298 FOXC1 forkhead box C1 2 2
MIRT260352 XRCC6 X-ray repair cross complementing 6 2 6
MIRT262478 KLF6 Kruppel like factor 6 2 2
MIRT263459 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT291952 TPM4 tropomyosin 4 2 2
MIRT295277 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT300679 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT322414 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT338103 CLIC4 chloride intracellular channel 4 2 4
MIRT361507 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT365827 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT371746 ATXN1 ataxin 1 2 2
MIRT375470 NFAT5 nuclear factor of activated T-cells 5 2 6
MIRT387879 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT395213 PRKCB protein kinase C beta 2 2
MIRT407418 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT442641 TBC1D12 TBC1 domain family member 12 2 2
MIRT442757 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT443435 MAPT microtubule associated protein tau 2 2
MIRT443707 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT444306 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT447332 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 2 2
MIRT448310 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT448362 TSR1 TSR1, ribosome maturation factor 2 6
MIRT448388 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT448640 NPNT nephronectin 2 2
MIRT450184 TMEM9B TMEM9 domain family member B 2 2
MIRT452303 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 2
MIRT453732 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT455237 KIAA2013 KIAA2013 2 2
MIRT456354 CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 2 2
MIRT457591 NCOA3 nuclear receptor coactivator 3 2 2
MIRT458288 FUT10 fucosyltransferase 10 2 2
MIRT458694 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT462073 CCDC77 coiled-coil domain containing 77 2 2
MIRT462122 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT463267 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT465103 TSC22D3 TSC22 domain family member 3 2 4
MIRT465108 TSC22D2 TSC22 domain family member 2 2 4
MIRT465228 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT465830 TMEM64 transmembrane protein 64 2 2
MIRT466450 TFAM transcription factor A, mitochondrial 2 8
MIRT467464 SNAPIN SNAP associated protein 2 2
MIRT467490 SMIM13 small integral membrane protein 13 2 6
MIRT467890 SLC22A23 solute carrier family 22 member 23 2 2
MIRT468846 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT469699 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT469853 PXK PX domain containing serine/threonine kinase like 2 8
MIRT470265 PRR14L proline rich 14 like 2 2
MIRT471136 PHF19 PHD finger protein 19 2 2
MIRT471265 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471917 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT472051 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT472161 NIN ninein 2 4
MIRT472339 NETO2 neuropilin and tolloid like 2 2 4
MIRT473262 MIDN midnolin 2 10
MIRT473326 MEX3A mex-3 RNA binding family member A 2 2
MIRT474868 KDM5B lysine demethylase 5B 2 2
MIRT475050 JOSD1 Josephin domain containing 1 2 2
MIRT475467 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT475695 HHIPL1 HHIP like 1 2 2
MIRT476905 FBXL5 F-box and leucine rich repeat protein 5 2 12
MIRT477187 F3 coagulation factor III, tissue factor 2 8
MIRT477281 ERGIC2 ERGIC and golgi 2 2 2
MIRT478551 CTNND1 catenin delta 1 2 2
MIRT479035 COIL coilin 2 10
MIRT479059 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 8
MIRT479263 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479801 CCND1 cyclin D1 2 12
MIRT479847 CCDC86 coiled-coil domain containing 86 2 2
MIRT480522 C11orf30 EMSY, BRCA2 interacting transcriptional repressor 2 10
MIRT480556 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT481340 ATL3 atlastin GTPase 3 2 2
MIRT481960 ANKH ANKH inorganic pyrophosphate transport regulator 2 8
MIRT482135 AKAP11 A-kinase anchoring protein 11 2 12
MIRT482474 ADAR adenosine deaminase, RNA specific 2 4
MIRT484824 ZNFX1 zinc finger NFX1-type containing 1 2 2
MIRT484911 ZFYVE26 zinc finger FYVE-type containing 26 2 4
MIRT485188 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 4
MIRT485366 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT488821 TBC1D28 TBC1 domain family member 28 2 2
MIRT491802 ZFYVE21 zinc finger FYVE-type containing 21 2 8
MIRT492006 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT492365 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493389 KIAA0513 KIAA0513 2 6
MIRT493667 HBP1 HMG-box transcription factor 1 2 2
MIRT494068 DUSP2 dual specificity phosphatase 2 2 4
MIRT494384 SOLH calpain 15 2 2
MIRT494426 BTG2 BTG anti-proliferation factor 2 2 4
MIRT494775 ANKRD33B ankyrin repeat domain 33B 2 10
MIRT498159 FEM1C fem-1 homolog C 2 8
MIRT499904 KIAA1191 KIAA1191 2 4
MIRT500763 TMEM127 transmembrane protein 127 2 6
MIRT501460 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501955 MAPRE3 microtubule associated protein RP/EB family member 3 2 8
MIRT502367 GIGYF1 GRB10 interacting GYF protein 1 2 8
MIRT502400 GATA6 GATA binding protein 6 2 8
MIRT503444 GINS4 GINS complex subunit 4 2 4
MIRT503605 ZNF780A zinc finger protein 780A 2 2
MIRT503824 TMEM242 transmembrane protein 242 2 4
MIRT504095 C9orf40 chromosome 9 open reading frame 40 2 6
MIRT505278 TUBB2A tubulin beta 2A class IIa 2 2
MIRT505489 SRSF2 serine and arginine rich splicing factor 2 2 4
MIRT505740 SEPT2 septin 2 2 4
MIRT505976 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT506228 PFKP phosphofructokinase, platelet 2 8
MIRT506431 NAGK N-acetylglucosamine kinase 2 6
MIRT506454 NACC2 NACC family member 2 2 4
MIRT506617 MARCH6 membrane associated ring-CH-type finger 6 2 8
MIRT506838 KIF23 kinesin family member 23 2 4
MIRT506865 KIAA1147 KIAA1147 2 2
MIRT507189 FZD9 frizzled class receptor 9 2 6
MIRT507235 FOXK2 forkhead box K2 2 4
MIRT507362 FAM129A family with sequence similarity 129 member A 2 6
MIRT507942 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT508087 ANKRD52 ankyrin repeat domain 52 2 2
MIRT508134 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT511083 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 4
MIRT511257 KLHL36 kelch like family member 36 2 6
MIRT511610 HIST1H4H histone cluster 1 H4 family member h 2 2
MIRT511725 HIST1H2BF histone cluster 1 H2B family member f 2 2
MIRT512318 ACTR2 ARP2 actin related protein 2 homolog 2 6
MIRT513462 NARS asparaginyl-tRNA synthetase 2 6
MIRT513984 CEP97 centrosomal protein 97 2 2
MIRT513998 CENPQ centromere protein Q 2 4
MIRT514035 BNIP2 BCL2 interacting protein 2 2 2
MIRT514096 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 6
MIRT514993 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT517016 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT524699 BTG3 BTG anti-proliferation factor 3 2 8
MIRT525199 ZNF93 zinc finger protein 93 2 2
MIRT527200 XIRP2 xin actin binding repeat containing 2 2 2
MIRT527469 CLEC12B C-type lectin domain family 12 member B 2 4
MIRT527888 SERF1B small EDRK-rich factor 1B 2 2
MIRT529344 SERF1A small EDRK-rich factor 1A 2 2
MIRT529493 TPD52L3 tumor protein D52 like 3 2 2
MIRT531821 ZNF264 zinc finger protein 264 2 6
MIRT531835 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT532509 KCNN1 potassium calcium-activated channel subfamily N member 1 2 2
MIRT533390 U2SURP U2 snRNP associated SURP domain containing 2 6
MIRT533836 TGFBR2 transforming growth factor beta receptor 2 2 6
MIRT533876 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT534005 SUV420H1 lysine methyltransferase 5B 2 2
MIRT534626 RNASEH1 ribonuclease H1 2 4
MIRT537731 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT537781 EIF4H eukaryotic translation initiation factor 4H 2 6
MIRT538716 CAPRIN2 caprin family member 2 2 4
MIRT541088 RLIM ring finger protein, LIM domain interacting 2 2
MIRT541284 GLO1 glyoxalase I 2 2
MIRT542058 SLC25A46 solute carrier family 25 member 46 2 2
MIRT542952 GDF11 growth differentiation factor 11 2 2
MIRT543506 PLS1 plastin 1 2 2
MIRT543578 RPF2 ribosome production factor 2 homolog 2 4
MIRT545201 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT546254 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT546293 TMEM200C transmembrane protein 200C 2 4
MIRT546457 SLC5A3 solute carrier family 5 member 3 2 4
MIRT546494 SIK1 salt inducible kinase 1 2 2
MIRT546820 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT547080 PLRG1 pleiotropic regulator 1 2 2
MIRT548228 FJX1 four jointed box 1 2 4
MIRT548338 EPHA4 EPH receptor A4 2 2
MIRT548390 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT548463 EGLN3 egl-9 family hypoxia inducible factor 3 2 2
MIRT548862 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT549821 LUZP2 leucine zipper protein 2 2 2
MIRT550092 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT550241 PVR poliovirus receptor 2 4
MIRT551744 FMNL2 formin like 2 2 2
MIRT552203 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT552639 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT552684 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT553031 USP48 ubiquitin specific peptidase 48 2 2
MIRT553474 TNKS2 tankyrase 2 2 2
MIRT554329 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT554411 SCD stearoyl-CoA desaturase 2 2
MIRT554474 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT554529 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT554554 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 2
MIRT554611 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT554744 RHOC ras homolog family member C 2 2
MIRT554802 RGMB repulsive guidance molecule family member b 2 4
MIRT555165 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT555192 PRUNE2 prune homolog 2 2 2
MIRT556143 MED17 mediator complex subunit 17 2 2
MIRT556591 LEPROT leptin receptor overlapping transcript 2 2
MIRT556903 ISOC1 isochorismatase domain containing 1 2 2
MIRT557756 FRS2 fibroblast growth factor receptor substrate 2 2 2
MIRT557828 FOXJ2 forkhead box J2 2 2
MIRT558220 EFCAB14 EF-hand calcium binding domain 14 2 4
MIRT558331 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558934 CBX1 chromobox 1 2 2
MIRT559078 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559439 ARSJ arylsulfatase family member J 2 2
MIRT561376 TXNIP thioredoxin interacting protein 2 2
MIRT561644 RUNX3 runt related transcription factor 3 2 2
MIRT561741 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562214 HMGB2 high mobility group box 2 2 2
MIRT562558 CCDC71L coiled-coil domain containing 71 like 2 4
MIRT562964 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT563378 DSPP dentin sialophosphoprotein 2 2
MIRT566557 OTUD4 OTU deubiquitinase 4 2 2
MIRT566878 LRP12 LDL receptor related protein 12 2 2
MIRT567008 KLHL15 kelch like family member 15 2 2
MIRT567050 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT567112 ITGB1 integrin subunit beta 1 2 2
MIRT567542 FGFR1OP FGFR1 oncogene partner 2 2
MIRT567627 FAM210A family with sequence similarity 210 member A 2 2
MIRT567684 EIF4A2 eukaryotic translation initiation factor 4A2 2 2
MIRT567915 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT571014 CKAP2 cytoskeleton associated protein 2 2 2
MIRT571220 F2R coagulation factor II thrombin receptor 2 2
MIRT571678 RRAS2 RAS related 2 2 2
MIRT571693 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT571723 RPL17-C18orf32 RPL17-C18orf32 readthrough 2 2
MIRT571860 NKIRAS1 NFKB inhibitor interacting Ras like 1 2 2
MIRT572045 GPR137B G protein-coupled receptor 137B 2 2
MIRT572209 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT573375 LIMA1 LIM domain and actin binding 1 2 2
MIRT573707 RBM12B RNA binding motif protein 12B 2 2
MIRT573915 SNAP47 synaptosome associated protein 47 2 2
MIRT574719 HAUS8 HAUS augmin like complex subunit 8 2 2
MIRT610998 BRI3BP BRI3 binding protein 2 2
MIRT615446 FAXC failed axon connections homolog 2 2
MIRT616437 FAM126B family with sequence similarity 126 member B 2 2
MIRT624424 CBX8 chromobox 8 2 2
MIRT625079 C15orf41 chromosome 15 open reading frame 41 2 2
MIRT628867 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT630570 SOWAHA sosondowah ankyrin repeat domain family member A 2 4
MIRT634454 PAK6 p21 (RAC1) activated kinase 6 2 2
MIRT640010 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT641800 USP32 ubiquitin specific peptidase 32 2 2
MIRT663408 SYT17 synaptotagmin 17 2 2
MIRT664793 LIAS lipoic acid synthetase 2 4
MIRT672157 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT679620 RRP36 ribosomal RNA processing 36 2 2
MIRT682524 GJD3 gap junction protein delta 3 2 2
MIRT684063 FOLR1 folate receptor 1 2 2
MIRT688711 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT691249 DFNB59 pejvakin 2 2
MIRT693152 THEM4 thioesterase superfamily member 4 2 2
MIRT693198 MKI67 marker of proliferation Ki-67 2 2
MIRT700440 PURB purine rich element binding protein B 2 2
MIRT701591 MYPN myopalladin 2 2
MIRT701966 MINK1 misshapen like kinase 1 2 2
MIRT702051 METTL21A methyltransferase like 21A 2 2
MIRT702588 JARID2 jumonji and AT-rich interaction domain containing 2 2 2
MIRT722312 DHCR24 24-dehydrocholesterol reductase 2 2
MIRT725222 PEA15 phosphoprotein enriched in astrocytes 15 2 2
MIRT755772 RAD51 RAD51 recombinase 5 1
MIRT755773 XRCC3 X-ray repair cross complementing 3 5 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4796-3p 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4796-3p Erlotinib 176870 NSC718781 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-4796-3p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-4796-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4796-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4796-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4796-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-4796-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

Error report submission