miRTarBase - #MIRT195549


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pre-miRNA Information
pre-miRNA hsa-mir-548s   
Genomic Coordinates chr2: 11767444 - 11767525
Description Homo sapiens miR-548s stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548s
Sequence 52| AUGGCCAAAACUGCAGUUAUUUU |74
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 + 11767495 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1187825186 1 dbSNP
rs1161985266 4 dbSNP
rs1476642595 6 dbSNP
rs772377981 6 dbSNP
rs1427306684 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol NIP7   
Synonyms CGI-37, HSPC031, KD93
Description NIP7, nucleolar pre-rRNA processing protein
Transcript NM_016101   
Expression
Putative miRNA Targets on NIP7
3'UTR of NIP7
(miRNA target sites are highlighted)		 
>NIP7|NM_016101|3'UTR
   1 AACGAAGCCATTCCAAGGACAGACGGCTGTATGGAAAGGCCGAGCTTTGTTTCCTGTGTTTGTGTGGACTCCACCATCAT
  81 GTTGAATTTTGTCAACACTCTGGCCTCTTCAGGGACTTCTTATTTACTGTACTCTCTATCACTGACAAATGCAGGCTGGA
 161 TTCTTATTATATACAGAGATGGCTCAAAAATGGGGTTTCAGATCTTTGTGACGAAATAGAATACTGTTTCATATTTGAAT
 241 CAGAGGGCTTCTTGTTCTGAGAAATAGGTTCAAAATCATTGGAACCAGGAACAAGAATAGCTTATTGTTATCTGTGATAA
 321 CACTGTTTTCTAAACACAAGGATTTTCTTTTTTATTAATATGCAACATAGACATTGCCATAACAGAATAATAAACCACAT
 401 GTGGGGTTTTAAAAATGAAATTTGGCTAATAGGAGCAATTCAGCTATTTTTCTATACAGTAATTGGTGTGTGGTATAGAA
 481 GAAAAACGGGTTCAAACCCCACTTCTGCCACCTACCAGCTATATGGCCTTGAATGAGTCATTCAGCTTTAATAAGGTTCA
 561 TTTTCTTCTGTTTAAAAAGACACAAAACTTGAAAATCAGCTTTGGCCATCTACCTGAGAATTAGAAAGTCTGATTTTTGG
 641 AATTAGAAATCATGATTGTAGGCTGGGCACAGTGGCTCGCGCCTGTAATCCCAGCACTTTGGGAGGCCAAGGCGGACGGA
 721 TCACTTGAGGTTAGGAGTTTGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAAAAAAAAAAAAAATTAG
 801 GTGTGGTGACACATGGCTGTGGTCCTAGTTACTTGGGAGGCTGAGGCAGGAGAATGGCTTGAACTGGGGAAGCAGAGCTT
 881 GCAGTGAGCCAAGATGGTGCCATTGCACTCCAGCCTGGGCGTGACAGAGTGAGACTCCATCTGATTGTAAAGCATCTAGT
 961 ACAGTGTACAGTGCCTTGGAAATGATAGGTATGGAATAAATGGTAATTATTTTTATATTATATATATTATGTATTCCTGT
1041 TATTAAGTGTAGAGTTTTATGAGTATAATTTGATTTTATTACCTTCTTTTTTACAAGCTGTTTTCTCAGTATTTTTCTTG
1121 GATGGGATGACGCTAGGCTGGAAAGTTTTTTTCATCACTATGATTTTATAAAACAATTTTTTCTATGAACCTTTACTTAC
1201 TTGACTGGATTGGACTAAAAGCACTGATCAGAGGCCACGACATAAAAATTCAGTCCCTTTGTCCTTCCCCGTGCCTCCCA
1281 AAGTTACTTTAAGATCCTTAGAATATTTCTTTAAATATTTTATAGACAAAAAATTTAAAGACTATCTGTATTGCAAAATT
1361 AAACTATTTCTTTAATGAATATATTGCTTATTTTAAGTTCCAAAGGTGAAGTCTTTAAGAATAAAACATTACCAACTCCT
1441 GCTTTTATATGTAAGCAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuUUAUUGAC-----GUCAAAACCGGUa 5'
            || | :||     ||| |||||||| 
Target 5' acAAAACTTGAAAATCAGCTTTGGCCAt 3'
 582 - 609 161.00 -15.80
2 
miRNA  3' uuuUAUUGACGUCAAAACCGGUa 5'
             | || || |  ||||||:| 
Target 5' tttAAAAATG-AAATTTGGCTAa 3'
 408 - 429 139.00 -7.80
3 
miRNA  3' uuuuauugacgucaaaACCGGUa 5'
                          |||||| 
Target 5' gagtttgagaccagccTGGCCAa 3'
 735 - 757 120.00 -10.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31605301 4 COSMIC
COSN30496979 25 COSMIC
COSN30472015 31 COSMIC
COSN30185600 35 COSMIC
COSN26986512 42 COSMIC
COSN31506423 54 COSMIC
COSN26986514 58 COSMIC
COSN28645738 104 COSMIC
COSN8865839 104 COSMIC
COSN31561192 117 COSMIC
COSN30535820 123 COSMIC
COSN30153227 147 COSMIC
COSN31501137 164 COSMIC
COSN31554660 177 COSMIC
COSN31961228 231 COSMIC
COSN1189865 243 COSMIC
COSN1707074 285 COSMIC
COSN1707077 291 COSMIC
COSN31779147 324 COSMIC
COSN8342596 340 COSMIC
COSN1189871 405 COSMIC
COSN7269302 580 COSMIC
COSN1189874 680 COSMIC
COSN20305101 683 COSMIC
COSN17590372 950 COSMIC
COSN5411076 1058 COSMIC
COSN6092750 1085 COSMIC
rs1048818 1132 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs780221560 3 dbSNP
rs369943294 4 dbSNP
rs201073050 5 dbSNP
rs1177733197 8 dbSNP
rs1253891294 9 dbSNP
rs777675472 10 dbSNP
rs771741273 11 dbSNP
rs1172003335 12 dbSNP
rs746752621 23 dbSNP
rs1410548418 24 dbSNP
rs1313164968 25 dbSNP
rs145746516 25 dbSNP
rs557196940 26 dbSNP
rs1306832474 29 dbSNP
rs1353229197 30 dbSNP
rs1409948301 31 dbSNP
rs1372925342 33 dbSNP
rs960073730 40 dbSNP
rs1457719039 41 dbSNP
rs200117312 42 dbSNP
rs189670796 43 dbSNP
rs1442730082 45 dbSNP
rs769019429 47 dbSNP
rs1366304371 50 dbSNP
rs181010195 51 dbSNP
rs1182958033 52 dbSNP
rs1374023567 54 dbSNP
rs1242201900 63 dbSNP
rs1473644462 71 dbSNP
rs956603889 73 dbSNP
rs1312674756 74 dbSNP
rs989301299 75 dbSNP
rs973596335 77 dbSNP
rs1488124031 83 dbSNP
rs920742173 89 dbSNP
rs1265759046 97 dbSNP
rs752617802 99 dbSNP
rs8053850 104 dbSNP
rs532424115 105 dbSNP
rs1228458861 106 dbSNP
rs1351874321 116 dbSNP
rs1298568300 120 dbSNP
rs975232787 130 dbSNP
rs922003421 135 dbSNP
rs746784045 137 dbSNP
rs1388159071 139 dbSNP
rs933328256 141 dbSNP
rs528087620 156 dbSNP
rs1427217990 161 dbSNP
rs1198276534 165 dbSNP
rs539932241 168 dbSNP
rs1458641661 173 dbSNP
rs944407908 182 dbSNP
rs1192686632 185 dbSNP
rs564688522 191 dbSNP
rs1267102563 196 dbSNP
rs1444335001 202 dbSNP
rs187120182 208 dbSNP
rs756923321 213 dbSNP
rs550928461 214 dbSNP
rs1304122500 215 dbSNP
rs899332163 218 dbSNP
rs113242511 228 dbSNP
rs1169196612 230 dbSNP
rs1437484176 231 dbSNP
rs1354565369 232 dbSNP
rs745395703 240 dbSNP
rs1031756696 245 dbSNP
rs895864454 246 dbSNP
rs1014268362 247 dbSNP
rs1438248931 251 dbSNP
rs1466662053 262 dbSNP
rs1023372710 264 dbSNP
rs1178232618 266 dbSNP
rs1275080398 268 dbSNP
rs1003185354 279 dbSNP
rs1334531722 280 dbSNP
rs8053896 287 dbSNP
rs1199372351 294 dbSNP
rs1453176053 302 dbSNP
rs548867273 302 dbSNP
rs995085453 306 dbSNP
rs192456022 310 dbSNP
rs534224498 315 dbSNP
rs1226760747 318 dbSNP
rs1342102156 319 dbSNP
rs1010775616 325 dbSNP
rs1358786243 325 dbSNP
rs1213001515 328 dbSNP
rs559091063 331 dbSNP
rs983597082 333 dbSNP
rs1333826220 340 dbSNP
rs570985659 341 dbSNP
rs752425653 344 dbSNP
rs1396675068 345 dbSNP
rs1404366546 346 dbSNP
rs1306279807 348 dbSNP
rs1272400813 355 dbSNP
rs72795286 359 dbSNP
rs1389517778 361 dbSNP
rs748606026 364 dbSNP
rs1168964441 366 dbSNP
rs1476302596 368 dbSNP
rs538808643 372 dbSNP
rs1186316211 373 dbSNP
rs112803243 375 dbSNP
rs966175709 380 dbSNP
rs1201093457 384 dbSNP
rs1029508346 386 dbSNP
rs1482996507 402 dbSNP
rs974460873 405 dbSNP
rs921593693 418 dbSNP
rs1354769253 420 dbSNP
rs1283978175 426 dbSNP
rs765341826 428 dbSNP
rs1286491835 443 dbSNP
rs1342513546 443 dbSNP
rs987505883 446 dbSNP
rs1239559037 447 dbSNP
rs556841266 448 dbSNP
rs940635043 458 dbSNP
rs1312052281 459 dbSNP
rs920828011 464 dbSNP
rs1419624421 469 dbSNP
rs1179361237 470 dbSNP
rs145629604 475 dbSNP
rs1253160126 479 dbSNP
rs1207160718 484 dbSNP
rs183305792 487 dbSNP
rs1056670700 488 dbSNP
rs895928385 489 dbSNP
rs1358702405 498 dbSNP
rs939096189 500 dbSNP
rs1227854235 505 dbSNP
rs554484760 517 dbSNP
rs572505006 518 dbSNP
rs1014735589 522 dbSNP
rs1044441216 526 dbSNP
rs773490519 528 dbSNP
rs1052088414 535 dbSNP
rs146525130 554 dbSNP
rs1335987385 558 dbSNP
rs1329303815 562 dbSNP
rs1322612594 565 dbSNP
rs1324417426 580 dbSNP
rs1405789155 583 dbSNP
rs1204897600 584 dbSNP
rs1428921388 586 dbSNP
rs539872534 593 dbSNP
rs58641063 596 dbSNP
rs1290116832 600 dbSNP
rs1044045844 604 dbSNP
rs1220619816 606 dbSNP
rs1477305808 610 dbSNP
rs1246682099 611 dbSNP
rs1200003047 615 dbSNP
rs1261305390 623 dbSNP
rs899723837 633 dbSNP
rs997106685 652 dbSNP
rs532075581 654 dbSNP
rs1330104731 655 dbSNP
rs950917080 656 dbSNP
rs879094306 658 dbSNP
rs1005080818 659 dbSNP
rs1281208394 663 dbSNP
rs188756215 677 dbSNP
rs1445573249 679 dbSNP
rs901212405 680 dbSNP
rs1019512866 681 dbSNP
rs77038341 682 dbSNP
rs1008990778 686 dbSNP
rs763759137 690 dbSNP
rs1388965329 691 dbSNP
rs201287577 693 dbSNP
rs921669826 697 dbSNP
rs1232541857 701 dbSNP
rs1173600888 713 dbSNP
rs1455975809 714 dbSNP
rs11540992 715 dbSNP
rs567218417 718 dbSNP
rs527664134 719 dbSNP
rs1382511434 724 dbSNP
rs1399958548 726 dbSNP
rs148249150 733 dbSNP
rs1056321504 738 dbSNP
rs1361459984 739 dbSNP
rs1279428613 741 dbSNP
rs1402057821 750 dbSNP
rs969652859 760 dbSNP
rs1295081637 775 dbSNP
rs1344921714 780 dbSNP
rs981381533 780 dbSNP
rs1290329681 781 dbSNP
rs552130925 781 dbSNP
rs769241431 781 dbSNP
rs1437078488 794 dbSNP
rs1388903681 795 dbSNP
rs1168326373 796 dbSNP
rs80014992 796 dbSNP
rs76822156 799 dbSNP
rs1421912913 801 dbSNP
rs1180269190 802 dbSNP
rs1349145951 803 dbSNP
rs1204983249 805 dbSNP
rs1287151434 808 dbSNP
rs1472600631 809 dbSNP
rs537922590 811 dbSNP
rs1213155284 812 dbSNP
rs1486595002 814 dbSNP
rs1272456612 816 dbSNP
rs1204164597 824 dbSNP
rs556619474 828 dbSNP
rs1226208815 829 dbSNP
rs1297471732 829 dbSNP
rs905923694 838 dbSNP
rs1284241901 840 dbSNP
rs994852853 842 dbSNP
rs1369231728 848 dbSNP
rs946401647 857 dbSNP
rs1043378015 869 dbSNP
rs568950489 871 dbSNP
rs1163150555 878 dbSNP
rs1362064580 879 dbSNP
rs190998945 894 dbSNP
rs996775092 895 dbSNP
rs1051416344 897 dbSNP
rs141233052 907 dbSNP
rs182715094 909 dbSNP
rs1005544636 914 dbSNP
rs1471687312 917 dbSNP
rs1015035078 921 dbSNP
rs150330070 922 dbSNP
rs1256829760 925 dbSNP
rs1480929298 926 dbSNP
rs753656189 927 dbSNP
rs75825743 928 dbSNP
rs996323024 929 dbSNP
rs1390126685 931 dbSNP
rs1028715982 936 dbSNP
rs1387483264 946 dbSNP
rs1325603587 954 dbSNP
rs1273487186 956 dbSNP
rs967740566 964 dbSNP
rs137966108 972 dbSNP
rs1392431391 985 dbSNP
rs1030604143 990 dbSNP
rs1310472422 992 dbSNP
rs981048755 995 dbSNP
rs1350677362 1003 dbSNP
rs956687861 1004 dbSNP
rs992476273 1006 dbSNP
rs1356245531 1012 dbSNP
rs1411263783 1013 dbSNP
rs1160038303 1015 dbSNP
rs1252640062 1018 dbSNP
rs1419566734 1018 dbSNP
rs917808573 1024 dbSNP
rs1488073467 1025 dbSNP
rs1290506177 1033 dbSNP
rs117718454 1038 dbSNP
rs1211157629 1040 dbSNP
rs980602089 1044 dbSNP
rs1266897671 1046 dbSNP
rs1239188881 1049 dbSNP
rs1319231222 1050 dbSNP
rs1247780802 1058 dbSNP
rs1386564214 1059 dbSNP
rs577724705 1062 dbSNP
rs562643092 1063 dbSNP
rs187321330 1064 dbSNP
rs542470746 1069 dbSNP
rs1328369233 1083 dbSNP
rs1437192559 1084 dbSNP
rs1433113803 1086 dbSNP
rs560751791 1087 dbSNP
rs1179136513 1092 dbSNP
rs1388226953 1096 dbSNP
rs1159193751 1098 dbSNP
rs988242370 1105 dbSNP
rs913675806 1106 dbSNP
rs927390755 1107 dbSNP
rs1173785651 1109 dbSNP
rs946472419 1110 dbSNP
rs191417718 1111 dbSNP
rs1442487641 1118 dbSNP
rs1049131941 1121 dbSNP
rs535841730 1122 dbSNP
rs1368180506 1123 dbSNP
rs1458576241 1124 dbSNP
rs757018640 1125 dbSNP
rs1051033719 1127 dbSNP
rs1048818 1132 dbSNP
rs1041031850 1133 dbSNP
rs1349270475 1134 dbSNP
rs1446733083 1145 dbSNP
rs1306040628 1146 dbSNP
rs1226707830 1147 dbSNP
rs1332549422 1148 dbSNP
rs1332850333 1152 dbSNP
rs1400086531 1159 dbSNP
rs1302360400 1165 dbSNP
rs750036604 1172 dbSNP
rs996759407 1187 dbSNP
rs747395623 1191 dbSNP
rs1447496026 1192 dbSNP
rs1389168639 1193 dbSNP
rs1193374526 1197 dbSNP
rs1429948797 1198 dbSNP
rs1312421676 1199 dbSNP
rs1253408026 1200 dbSNP
rs149467272 1201 dbSNP
rs1486270544 1211 dbSNP
rs903634199 1220 dbSNP
rs1283153530 1231 dbSNP
rs755644591 1232 dbSNP
rs1203447019 1234 dbSNP
rs531739204 1239 dbSNP
rs183919255 1240 dbSNP
rs1246477104 1243 dbSNP
rs1229823213 1244 dbSNP
rs74826591 1253 dbSNP
rs1312057293 1262 dbSNP
rs1415530655 1267 dbSNP
rs905200711 1269 dbSNP
rs1002583776 1271 dbSNP
rs779590806 1272 dbSNP
rs1035251408 1284 dbSNP
rs1168309335 1288 dbSNP
rs1338103113 1292 dbSNP
rs991799913 1294 dbSNP
rs1025329795 1298 dbSNP
rs988296170 1300 dbSNP
rs748765334 1304 dbSNP
rs1475286167 1307 dbSNP
rs1259009960 1312 dbSNP
rs969319118 1316 dbSNP
rs980625655 1324 dbSNP
rs1021078164 1326 dbSNP
rs1274103759 1334 dbSNP
rs536024828 1336 dbSNP
rs750964906 1337 dbSNP
rs1354482755 1343 dbSNP
rs919756288 1347 dbSNP
rs1265143884 1352 dbSNP
rs1233977495 1366 dbSNP
rs547947038 1367 dbSNP
rs1424637180 1371 dbSNP
rs1189827137 1374 dbSNP
rs930750778 1384 dbSNP
rs984882450 1387 dbSNP
rs920986416 1388 dbSNP
rs932353371 1388 dbSNP
rs986447130 1392 dbSNP
rs1392976014 1393 dbSNP
rs566351491 1402 dbSNP
rs1465112280 1406 dbSNP
rs1163676305 1416 dbSNP
rs575680614 1419 dbSNP
rs777059271 1420 dbSNP
rs1040344398 1432 dbSNP
rs558439706 1439 dbSNP
rs576752797 1440 dbSNP
rs878969990 1440 dbSNP
rs543668106 1441 dbSNP
rs1470046374 1449 dbSNP
rs1050590776 1451 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuuuauugaCGUCAAAAC-C-GGUa 5'
                   | || |||| | ||| 
Target 5' ----gguuaGGAG-UUUGAGACCAg 3'
 		1 - 20
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Cardiac Tissues
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM2202481. RNA binding protein: AGO2. Condition:S6_LV_61yo_Male_AGO2_bound_RNA ...

- Spengler RM; Zhang X; Cheng C; McLendon JM; et al., 2016, Nucleic acids research.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuuuauugaCGUCAAAAC-C-GGUa 5'
                   | || |||| | ||| 
Target 5' ---agguuaGGAG-UUUGAGACCAg 3'
 		1 - 21
Article - Spengler RM; Zhang X; Cheng C; McLendon JM; et al.
- Nucleic acids research, 2016
MicroRNAs (miRs) have emerged as key biological effectors in human health and disease. These small noncoding RNAs are incorporated into Argonaute (Ago) proteins, where they direct post-transcriptional gene silencing via base-pairing with target transcripts. Although miRs have become intriguing biological entities and attractive therapeutic targets, the translational impacts of miR research remain limited by a paucity of empirical miR targeting data, particularly in human primary tissues. Here, to improve our understanding of the diverse roles miRs play in cardiovascular function and disease, we applied high-throughput methods to globally profile miR:target interactions in human heart tissues. We deciphered Ago2:RNA interactions using crosslinking immunoprecipitation coupled with high-throughput sequencing (HITS-CLIP) to generate the first transcriptome-wide map of miR targeting events in human myocardium, detecting 4000 cardiac Ago2 binding sites across >2200 target transcripts. Our initial exploration of this interactome revealed an abundance of miR target sites in gene coding regions, including several sites pointing to new miR-29 functions in regulating cardiomyocyte calcium, growth and metabolism. Also, we uncovered several clinically-relevant interactions involving common genetic variants that alter miR targeting events in cardiomyopathy-associated genes. Overall, these data provide a critical resource for bolstering translational miR research in heart, and likely beyond.
LinkOut: [PMID: 27418678]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000254940.5 | 3UTR | GGUUAGGAGUUUGAGACCAGCCUGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
BRCA 0.428 0.01 0.334 0.02 35 Click to see details
THCA 0.296 0.04 0.339 0.02 34 Click to see details
KICH 0.43 0.09 0.745 0 11 Click to see details
KIRP -0.513 0.12 -0.250 0.29 7 Click to see details
KIRC -0.268 0.16 -0.353 0.09 16 Click to see details
HNSC 0.295 0.19 0.218 0.26 11 Click to see details
UCEC -0.219 0.26 -0.091 0.4 11 Click to see details
LUSC -0.163 0.29 -0.222 0.22 14 Click to see details
ESCA 0.615 0.29 0.500 0.33 3 Click to see details
CHOL 0.277 0.36 0.200 0.4 4 Click to see details
LIHC -0.056 0.38 -0.023 0.45 34 Click to see details
STAD 0.037 0.46 0.285 0.21 10 Click to see details
PRAD -0.062 0.46 0.000 0.5 5 Click to see details
PAAD 0.052 0.48 0.500 0.33 3 Click to see details
PAAD 0.052 0.48 0.500 0.33 3 Click to see details
PAAD 0.052 0.48 0.500 0.33 3 Click to see details
PAAD 0.052 0.48 0.500 0.33 3 Click to see details
PAAD 0.052 0.48 0.500 0.33 3 Click to see details
374 hsa-miR-548s Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT075229 PHF13 PHD finger protein 13 2 4
MIRT090370 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT096411 C5ORF22 chromosome 5 open reading frame 22 2 2
MIRT153366 MAVS mitochondrial antiviral signaling protein 2 2
MIRT194890 DCTN5 dynactin subunit 5 2 8
MIRT195549 NIP7 NIP7, nucleolar pre-rRNA processing protein 2 2
MIRT219209 LYRM4 LYR motif containing 4 2 2
MIRT234472 ZNF652 zinc finger protein 652 2 2
MIRT235966 BACH1 BTB domain and CNC homolog 1 2 2
MIRT271874 ZNF678 zinc finger protein 678 2 2
MIRT294224 U2AF2 U2 small nuclear RNA auxiliary factor 2 2 2
MIRT334729 BTG2 BTG anti-proliferation factor 2 2 4
MIRT441397 SOX5 SRY-box 5 2 2
MIRT441551 TBCEL tubulin folding cofactor E like 2 2
MIRT441568 PLEKHA2 pleckstrin homology domain containing A2 2 2
MIRT441581 POLR1B RNA polymerase I subunit B 2 2
MIRT441681 GABRB2 gamma-aminobutyric acid type A receptor beta2 subunit 2 2
MIRT442049 KLHDC10 kelch domain containing 10 2 2
MIRT442633 TBC1D12 TBC1 domain family member 12 2 2
MIRT442694 ZNF646 zinc finger protein 646 2 4
MIRT443108 DENND5B DENN domain containing 5B 2 2
MIRT443110 VLDLR very low density lipoprotein receptor 2 2
MIRT443423 MAPT microtubule associated protein tau 2 2
MIRT443464 ACPP acid phosphatase, prostate 2 2
MIRT443763 HLF HLF, PAR bZIP transcription factor 2 2
MIRT443806 SIDT2 SID1 transmembrane family member 2 2 2
MIRT451031 ZNF610 zinc finger protein 610 2 2
MIRT451275 ZNF101 zinc finger protein 101 2 6
MIRT451671 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 6
MIRT454144 FLYWCH2 FLYWCH family member 2 2 8
MIRT454595 MAG myelin associated glycoprotein 2 4
MIRT459352 AGXT alanine-glyoxylate aminotransferase 2 2
MIRT460053 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460737 HEXA hexosaminidase subunit alpha 2 2
MIRT463084 ZNF618 zinc finger protein 618 2 2
MIRT465757 TMPPE transmembrane protein with metallophosphoesterase domain 2 8
MIRT471102 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472939 MSMO1 methylsterol monooxygenase 1 2 6
MIRT473686 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT474288 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 2 2
MIRT476935 FAM83G family with sequence similarity 83 member G 2 2
MIRT477130 FAM118A family with sequence similarity 118 member A 2 2
MIRT477321 EPHA2 EPH receptor A2 2 2
MIRT478310 DDN dendrin 2 2
MIRT494936 IFFO2 intermediate filament family orphan 2 2 2
MIRT495287 RASL10B RAS like family 10 member B 2 2
MIRT495310 GDF11 growth differentiation factor 11 2 2
MIRT495323 ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 2 4
MIRT496580 RGMA repulsive guidance molecule family member a 2 2
MIRT496647 TNPO2 transportin 2 2 2
MIRT496804 SLC16A10 solute carrier family 16 member 10 2 2
MIRT496850 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496910 RTKN rhotekin 2 2
MIRT496955 MAP1LC3B microtubule associated protein 1 light chain 3 beta 2 2
MIRT497149 PRDM15 PR/SET domain 15 2 2
MIRT498253 ELAVL1 ELAV like RNA binding protein 1 2 2
MIRT498380 GPRC5B G protein-coupled receptor class C group 5 member B 2 2
MIRT500426 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500482 ZBTB4 zinc finger and BTB domain containing 4 2 6
MIRT505372 TMEM154 transmembrane protein 154 2 4
MIRT505674 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT509787 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT512344 ZNF665 zinc finger protein 665 2 4
MIRT512404 CD84 CD84 molecule 2 2
MIRT512526 ATCAY ATCAY, caytaxin 2 4
MIRT513223 RYK receptor-like tyrosine kinase 2 2
MIRT514247 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT514276 ZNF345 zinc finger protein 345 2 4
MIRT514426 SLC38A7 solute carrier family 38 member 7 2 2
MIRT514551 PTGR2 prostaglandin reductase 2 2 2
MIRT514776 RBM4B RNA binding motif protein 4B 2 2
MIRT514854 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 2
MIRT515033 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515265 CSNK1E casein kinase 1 epsilon 2 2
MIRT515283 MSRB1 methionine sulfoxide reductase B1 2 2
MIRT515587 FBXL13 F-box and leucine rich repeat protein 13 2 2
MIRT515898 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT515945 C9orf156 tRNA methyltransferase O 2 2
MIRT516281 DBT dihydrolipoamide branched chain transacylase E2 2 2
MIRT516517 PARK2 parkin RBR E3 ubiquitin protein ligase 2 2
MIRT516932 THAP1 THAP domain containing 1 2 4
MIRT517201 OTUD6A OTU deubiquitinase 6A 2 2
MIRT517379 METTL7A methyltransferase like 7A 2 2
MIRT517467 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT517564 SNX22 sorting nexin 22 2 2
MIRT517617 DEGS1 delta 4-desaturase, sphingolipid 1 2 2
MIRT518210 TRMT10B tRNA methyltransferase 10B 2 2
MIRT518545 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT519089 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 4
MIRT519103 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT519138 C2orf49 chromosome 2 open reading frame 49 2 2
MIRT519316 TIMELESS timeless circadian clock 2 2
MIRT519393 DNASE2 deoxyribonuclease 2, lysosomal 2 4
MIRT519441 GLA galactosidase alpha 2 2
MIRT519465 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT519705 ZNF584 zinc finger protein 584 2 4
MIRT519822 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT520236 USP9X ubiquitin specific peptidase 9, X-linked 2 4
MIRT520259 URGCP upregulator of cell proliferation 2 2
MIRT520409 TXNL1 thioredoxin like 1 2 4
MIRT521401 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT521511 QSOX1 quiescin sulfhydryl oxidase 1 2 2
MIRT522644 MANEAL mannosidase endo-alpha like 2 2
MIRT522789 KPNA4 karyopherin subunit alpha 4 2 4
MIRT523502 GMPS guanine monophosphate synthase 2 4
MIRT523686 FHL2 four and a half LIM domains 2 2 2
MIRT523902 EMC7 ER membrane protein complex subunit 7 2 4
MIRT524126 DMXL1 Dmx like 1 2 2
MIRT524770 BCKDK branched chain ketoacid dehydrogenase kinase 2 2
MIRT528264 GPRIN2 G protein regulated inducer of neurite outgrowth 2 2 2
MIRT528675 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT529138 CLCC1 chloride channel CLIC like 1 2 4
MIRT530704 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT531620 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533399 TXNIP thioredoxin interacting protein 2 2
MIRT535650 NLN neurolysin 2 2
MIRT539958 SPRY1 sprouty RTK signaling antagonist 1 2 2
MIRT551760 MED21 mediator complex subunit 21 2 2
MIRT552021 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT557187 HOXA10 homeobox A10 2 2
MIRT560435 GOLGA7B golgin A7 family member B 2 2
MIRT561596 SKI SKI proto-oncogene 2 2
MIRT563915 STAT2 signal transducer and activator of transcription 2 2 2
MIRT565964 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT567313 HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 2 2
MIRT572687 NCMAP non-compact myelin associated protein 2 2
MIRT574419 SOX4 SRY-box 4 2 2
MIRT575235 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576186 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576301 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576477 Lhx4 LIM homeobox protein 4 2 3
MIRT576576 Ptbp1 polypyrimidine tract binding protein 1 2 2
MIRT576602 Ccdc117 coiled-coil domain containing 117 2 2
MIRT576655 Fam216a family with sequence similarity 216, member A 2 2
MIRT576666 H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 2 2
MIRT576703 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576845 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576944 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT608646 ABCF3 ATP binding cassette subfamily F member 3 2 2
MIRT609892 C1S complement C1s 2 2
MIRT613517 ANAPC7 anaphase promoting complex subunit 7 2 2
MIRT614073 XRCC2 X-ray repair cross complementing 2 2 2
MIRT618202 C22orf39 chromosome 22 open reading frame 39 2 2
MIRT618350 CDKL1 cyclin dependent kinase like 1 2 2
MIRT618619 GREB1 growth regulation by estrogen in breast cancer 1 2 4
MIRT618826 PHF20 PHD finger protein 20 2 2
MIRT619371 SYT2 synaptotagmin 2 2 2
MIRT620103 HARBI1 harbinger transposase derived 1 2 2
MIRT620220 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT621183 FAM153B family with sequence similarity 153 member B 2 2
MIRT621477 GPKOW G-patch domain and KOW motifs 2 2
MIRT621874 TAZ tafazzin 2 2
MIRT624054 EIF4E eukaryotic translation initiation factor 4E 2 2
MIRT624689 AR androgen receptor 2 2
MIRT625234 C6orf89 chromosome 6 open reading frame 89 2 2
MIRT626070 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT629490 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT629861 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630995 ZNF573 zinc finger protein 573 2 2
MIRT631087 UQCRB ubiquinol-cytochrome c reductase binding protein 2 2
MIRT631279 SGSM1 small G protein signaling modulator 1 2 2
MIRT631526 MYO6 myosin VI 2 2
MIRT631637 WDR91 WD repeat domain 91 2 4
MIRT632773 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT633272 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT633588 ABRACL ABRA C-terminal like 2 2
MIRT634152 YME1L1 YME1 like 1 ATPase 2 2
MIRT634920 CHMP1B charged multivesicular body protein 1B 2 2
MIRT635848 PRR11 proline rich 11 2 2
MIRT636006 SAMD15 sterile alpha motif domain containing 15 2 4
MIRT639203 RAD51 RAD51 recombinase 2 2
MIRT639378 FFAR4 free fatty acid receptor 4 2 2
MIRT639535 GSG2 histone H3 associated protein kinase 2 2
MIRT639635 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT640224 TOMM40 translocase of outer mitochondrial membrane 40 2 2
MIRT640297 PRR13 proline rich 13 2 2
MIRT640683 MCUR1 mitochondrial calcium uniporter regulator 1 2 2
MIRT641118 NPHP3 nephrocystin 3 2 2
MIRT641451 LRIG1 leucine rich repeats and immunoglobulin like domains 1 2 2
MIRT642306 FPR1 formyl peptide receptor 1 2 2
MIRT642712 ZNF273 zinc finger protein 273 2 2
MIRT642840 ZNF891 zinc finger protein 891 2 2
MIRT643694 KIAA0586 KIAA0586 2 2
MIRT644309 NFKBID NFKB inhibitor delta 2 2
MIRT644504 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT645171 NOL9 nucleolar protein 9 2 4
MIRT645728 POLR3A RNA polymerase III subunit A 2 2
MIRT646120 SLC26A9 solute carrier family 26 member 9 2 2
MIRT647725 CXCR2 C-X-C motif chemokine receptor 2 2 2
MIRT647991 PDE12 phosphodiesterase 12 2 2
MIRT648053 TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit 2 2
MIRT648172 TMEM192 transmembrane protein 192 2 2
MIRT648789 VPS8 VPS8, CORVET complex subunit 2 2
MIRT649285 NEK8 NIMA related kinase 8 2 2
MIRT649837 LIPG lipase G, endothelial type 2 2
MIRT650004 KLB klotho beta 2 2
MIRT650563 YIPF4 Yip1 domain family member 4 2 2
MIRT651782 UTP6 UTP6, small subunit processome component 2 2
MIRT652076 TSPAN14 tetraspanin 14 2 2
MIRT653397 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT654540 RAB3C RAB3C, member RAS oncogene family 2 2
MIRT655362 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT655386 PAPLN papilin, proteoglycan like sulfated glycoprotein 2 2
MIRT657139 ITGA1 integrin subunit alpha 1 2 2
MIRT657754 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT658821 EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 2 2
MIRT659082 DENR density regulated re-initiation and release factor 2 2
MIRT659106 DENND6A DENN domain containing 6A 2 2
MIRT659409 CORO2A coronin 2A 2 2
MIRT659829 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT660252 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT660260 BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 2 4
MIRT660933 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662986 TMEM59 transmembrane protein 59 2 2
MIRT663064 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663256 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 2 2
MIRT663583 C10orf32 BLOC-1 related complex subunit 7 2 2
MIRT663755 ZNF285 zinc finger protein 285 2 2
MIRT664135 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT665143 PTK6 protein tyrosine kinase 6 2 2
MIRT665394 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665978 SYT11 synaptotagmin 11 2 2
MIRT666186 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT666568 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT666772 PTGES3L prostaglandin E synthase 3 like 2 2
MIRT667018 PDF peptide deformylase, mitochondrial 2 2
MIRT667098 SLC25A2 solute carrier family 25 member 2 2 2
MIRT667134 NT5DC3 5'-nucleotidase domain containing 3 2 4
MIRT669790 GAN gigaxonin 2 2
MIRT669920 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT669998 GPR156 G protein-coupled receptor 156 2 4
MIRT670291 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670380 EMP2 epithelial membrane protein 2 2 2
MIRT670453 RSBN1L round spermatid basic protein 1 like 2 2
MIRT670564 GLTP glycolipid transfer protein 2 2
MIRT670859 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT671055 KIF1B kinesin family member 1B 2 2
MIRT671078 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT671299 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT671801 WISP3 WNT1 inducible signaling pathway protein 3 2 2
MIRT671851 APOL2 apolipoprotein L2 2 2
MIRT671950 SPPL3 signal peptide peptidase like 3 2 2
MIRT671990 OSTF1 osteoclast stimulating factor 1 2 2
MIRT672163 FANCF Fanconi anemia complementation group F 2 2
MIRT672267 SHE Src homology 2 domain containing E 2 2
MIRT672444 TTPAL alpha tocopherol transfer protein like 2 2
MIRT672870 TTC28 tetratricopeptide repeat domain 28 2 2
MIRT673643 CYCS cytochrome c, somatic 2 4
MIRT674049 ATXN3 ataxin 3 2 2
MIRT674240 NUP62 nucleoporin 62 2 2
MIRT674276 LMOD3 leiomodin 3 2 2
MIRT674430 MIOX myo-inositol oxygenase 2 4
MIRT674473 BCL2L15 BCL2 like 15 2 2
MIRT674493 TIRAP TIR domain containing adaptor protein 2 2
MIRT674846 GINM1 glycoprotein integral membrane 1 2 2
MIRT675706 EMC3 ER membrane protein complex subunit 3 2 2
MIRT675972 FAM126B family with sequence similarity 126 member B 2 2
MIRT676235 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT676737 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT677426 DDX19B DEAD-box helicase 19B 2 2
MIRT677454 PDLIM3 PDZ and LIM domain 3 2 2
MIRT677576 TRIM65 tripartite motif containing 65 2 2
MIRT677639 HAUS2 HAUS augmin like complex subunit 2 2 2
MIRT677827 TSPYL1 TSPY like 1 2 2
MIRT678937 MYADM myeloid associated differentiation marker 2 2
MIRT680405 SFT2D2 SFT2 domain containing 2 2 2
MIRT680475 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT683260 ZNF329 zinc finger protein 329 2 2
MIRT683564 CARD8 caspase recruitment domain family member 8 2 2
MIRT683812 CBS cystathionine-beta-synthase 2 2
MIRT684532 ZNF460 zinc finger protein 460 2 2
MIRT684939 PLA2G16 phospholipase A2 group XVI 2 2
MIRT685127 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT685164 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685429 PM20D2 peptidase M20 domain containing 2 2 2
MIRT685437 SLC10A6 solute carrier family 10 member 6 2 2
MIRT685676 TRIM45 tripartite motif containing 45 2 2
MIRT685991 NEK4 NIMA related kinase 4 2 2
MIRT687311 OTUD7B OTU deubiquitinase 7B 2 2
MIRT687535 MOB1B MOB kinase activator 1B 2 2
MIRT687710 KLF2 Kruppel like factor 2 2 2
MIRT687902 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT688044 GLUL glutamate-ammonia ligase 2 2
MIRT688891 C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 2 2
MIRT689242 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT689519 ORC6 origin recognition complex subunit 6 2 2
MIRT689582 NUDT7 nudix hydrolase 7 2 2
MIRT689611 AKAP6 A-kinase anchoring protein 6 2 2
MIRT689665 RBM23 RNA binding motif protein 23 2 2
MIRT689911 ACOT13 acyl-CoA thioesterase 13 2 2
MIRT690005 LUZP2 leucine zipper protein 2 2 2
MIRT690027 CCDC90B coiled-coil domain containing 90B 2 2
MIRT690309 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690503 MDM2 MDM2 proto-oncogene 2 2
MIRT691056 CRCP CGRP receptor component 2 2
MIRT691441 CXorf36 chromosome X open reading frame 36 2 2
MIRT691918 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692269 GPR157 G protein-coupled receptor 157 2 2
MIRT692631 SUSD1 sushi domain containing 1 2 2
MIRT693378 ZNF528 zinc finger protein 528 2 2
MIRT693858 IYD iodotyrosine deiodinase 2 2
MIRT693971 ZNF70 zinc finger protein 70 2 2
MIRT694137 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT694288 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT694608 CXorf56 chromosome X open reading frame 56 2 2
MIRT694988 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695160 TCTN2 tectonic family member 2 2 2
MIRT695359 PHAX phosphorylated adaptor for RNA export 2 2
MIRT695538 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT695884 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT696015 TYRO3 TYRO3 protein tyrosine kinase 2 2
MIRT696052 ZNF264 zinc finger protein 264 2 2
MIRT696119 GLP2R glucagon like peptide 2 receptor 2 2
MIRT696154 SLC11A2 solute carrier family 11 member 2 2 2
MIRT696158 TIPIN TIMELESS interacting protein 2 2
MIRT696295 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT696394 CORO7 coronin 7 2 2
MIRT696675 APOC3 apolipoprotein C3 2 2
MIRT696696 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT696742 RBM28 RNA binding motif protein 28 2 2
MIRT696842 WDR13 WD repeat domain 13 2 2
MIRT697179 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT697876 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT698134 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT698352 TMEM127 transmembrane protein 127 2 2
MIRT698698 TBC1D15 TBC1 domain family member 15 2 2
MIRT698824 STARD7 StAR related lipid transfer domain containing 7 2 2
MIRT699111 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT699657 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT699845 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT699954 RSBN1 round spermatid basic protein 1 2 2
MIRT700447 PURB purine rich element binding protein B 2 2
MIRT700887 PER2 period circadian clock 2 2 2
MIRT700906 PDXK pyridoxal kinase 2 2
MIRT701001 PCSK6 proprotein convertase subtilisin/kexin type 6 2 2
MIRT701082 PAPOLG poly(A) polymerase gamma 2 2
MIRT701138 PANK1 pantothenate kinase 1 2 2
MIRT701204 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT701374 NOA1 nitric oxide associated 1 2 2
MIRT701627 MYO10 myosin X 2 2
MIRT701847 MRO maestro 2 2
MIRT702074 PCDHB11 protocadherin beta 11 2 2
MIRT702265 LHX4 LIM homeobox 4 2 3
MIRT702350 KLHL26 kelch like family member 26 2 2
MIRT702417 KIF5B kinesin family member 5B 2 2
MIRT702553 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT702769 IFNLR1 interferon lambda receptor 1 2 2
MIRT703300 GGCX gamma-glutamyl carboxylase 2 2
MIRT703408 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703467 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT703549 FKBP14 FK506 binding protein 14 2 2
MIRT703953 ENAH ENAH, actin regulator 2 2
MIRT703969 EMC10 ER membrane protein complex subunit 10 2 2
MIRT704307 DCUN1D5 defective in cullin neddylation 1 domain containing 5 2 2
MIRT704455 CRNKL1 crooked neck pre-mRNA splicing factor 1 2 2
MIRT705028 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT705113 C4orf29 abhydrolase domain containing 18 2 2
MIRT705837 AHCY adenosylhomocysteinase 2 2
MIRT708432 CPM carboxypeptidase M 2 2
MIRT710340 ZNF669 zinc finger protein 669 2 2
MIRT710828 PLEKHO2 pleckstrin homology domain containing O2 2 2
MIRT712615 KNSTRN kinetochore localized astrin/SPAG5 binding protein 2 2
MIRT714275 COQ7 coenzyme Q7, hydroxylase 2 2
MIRT718942 HIF1AN hypoxia inducible factor 1 alpha subunit inhibitor 2 2
MIRT719748 RRP8 ribosomal RNA processing 8 2 2
MIRT720035 C12orf5 TP53 induced glycolysis regulatory phosphatase 2 2
MIRT720432 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT720632 SPA17 sperm autoantigenic protein 17 2 2
MIRT720728 ELOVL7 ELOVL fatty acid elongase 7 2 2
MIRT722882 MOB3A MOB kinase activator 3A 2 2
MIRT723045 YTHDC1 YTH domain containing 1 2 2
MIRT723441 NDUFAF3 NADH:ubiquinone oxidoreductase complex assembly factor 3 2 2
MIRT724404 WWC1 WW and C2 domain containing 1 2 2
MIRT725459 GRAP2 GRB2-related adaptor protein 2 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-548s Ceritinib 57379345 NSC776422 approved sensitive High Non-Small Cell Lung Cancer cell line (H3122, H2228)
hsa-mir-548s Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)
hsa-miR-548s Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-548s Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-548s Osimertinib 71496458 NSC779217 approved sensitive cell line (PC9)
hsa-miR-548s Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-548s Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-548s Ceritinib 57379345 NSC776422 approved sensitive cell line (H3122)

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