Gene Symbol |
DCAF7
|
Synonyms |
AN11, HAN11, SWAN-1, WDR68 |
Description |
DDB1 and CUL4 associated factor 7 |
Transcript |
NM_005828
|
Expression |
|
Putative miRNA Targets on DCAF7 |
|
3'UTR of DCAF7 (miRNA target sites are highlighted) |
>DCAF7|NM_005828|3'UTR
1 TGTTGGTGGCGCTGTGCCCACGAGGCAGGGGCTTTTGTATTTCCTGCCTCTGCCCCACCCCCAAAGTAAGAAGAAACATG
81 TTTCCAGTGGCCAGTATGTCTTTCATTGCTTTGCACCCACTGTTACCAGAAGCTGCTCTAGGAGTTCCTGGCCAGTCACC
161 CCATCGCCCTCTGTGGCAGACTCAGTGCTGTGTGGCGCCTCCTCAGCCCAGGGCTGAGTTTTAAGATTTTCTCTCCTTTC
241 CTCTTCTCCTTTGGTTCCTCAATTAAAAAATGTGTGTATATTTGTTTGTCAGGCGTTGTGTTGAGGAGCAGTTCACGCAC
321 TGGCTGTGTCTATTCCTCTGCCCAGGTGTCTCTGTTTGCTGCCCAAGGCAGCAGTTCATGTCTCGTCCATGTCCATGTTC
401 GTGTTAGCACTTACGTGGGAACAAATACCAATTTGTCTTTTCTCCTAGTATCAGTGTGTTTAACAAATTTTAACTTTGTA
481 TATTTGTTATCTATCAGGCTAATTTTTTTATGAAAAGAATTTTACTCTCCTGCTTCATTTCTTTGTCTTATAGTCCTCCC
561 TCTTTGCACCTTCTTCTCTTCCCTCAG TGCCTGGAGCTGGTACTGGGCCCCTGGCCCCATGAGCAGTTTGCCTTCTTGAG
641 TCACTGCCTGTGTAGTACATACCTGACCGGGAGTCCAAACCACCTTGGTGCTCTGAAGTCCACTGACTCATCACACCTTT
721 CTTAGCCTGGCTCCTCTCAAGGGCATTCTGGGCTTGTAAACAGACATAGGAAGCCTCTGTTTACCCTGAAGCACCACTGT
801 CCAGCCCATTGGTTCCCACTGGCAGCATGGTAGAGCTGAGAGAAACAGGCTCTCAGGGTACCTGACTTGAGGGGAATCGT
881 TTCATGAAGCTGAACTTCAAGCATATTTCCAGTACATTCTTTCAGAGTCTGTTTTTCCATCCAAATATAAGCCCCAGGCC
961 ATTCCACTTAGTGTCTTTTCAATGATAGGCAAGAATGATATCTGAGTTGAACTTCGGTGCTTCTGTTGTTTGAGTTTACT
1041 GTGCCTGGTGGTATATTGGGCATTCTTTGGATTGAGTGTTCTGAGGTGAGAGAGTCTTCCCGAGGCATCCTGTCTGTGCT
1121 TCCAACCCTGAACAAGACCTTACATGAGAGATGGACTGATGGACTGCGGCAATCCTGGGCTGTCAAGTGGATAGATAGTT
1201 AAAAAGCATTATACTGTGGGTAATGAAAAGGGAGGAAAAAAAAAGAAGGAAAAGGAATTATAGACCCCCAGGGTCAGCCA
1281 GTTAAGAGCTCTACCCACACCTGTCAACCCCTCTCTCCCCCAGTTTAGGTTCTGAGCAGTATTGGACTTGTAGCCTGCAG
1361 TTGTCTTTTGACTTGCAGGCCGCAGGTGTCTTTCTGTTATGTGAATGAGTTCCATGGAGGGGCATATGTGTGATTCCACC
1441 GTTAGATGAGCCCTTGGGGCAGGCAGTTTGGGATGTGCTCTTGGGGGAAAGTTGGCTGTTTCCTTGCGCTCTGCTCCTAC
1521 CCGAAGGTTTTTAAGTCCCTCTGAATTGCTCATCTGAGATTAGTAGAGTAGCAGGCCTGAAGGATGATGGTTTTGTCCTC
1601 TTTGGTTCTCACCTGCTTGAGAAGTAAAACAGTAACTTTGTTCTTCTGGGCCCTTAAGCTTTTTTGGTTAAGTCTTCCTT
1681 TTCAGAAGTAGATGTCATTATATGCCAAAAGTCTAGCTCTTTGCTTTACCATACAGGGACCTGTCCCAAAGAAAAAGGCT
1761 CTTTTTTTAGCCAGCATATTTCCCCTTCTACCCTTTTACTTTGTTGTTCTGATTTTAGGACTCTGGCTGGCCATGTGCTT
1841 GTGGTTGCCTCTCCTGCATTTGCCACTGGATTTGCACTGCATCGTTTGGAGATACAAAGCGAGCAGTTCTTGGTCAGAAC
1921 CCTCCTCTGCTTTTCATTGTGTTTGATAATGGTTACTGGGTCCTTCTCTCAAGGGTAGCAAGGCCAAGCTGATGGCTGCT
2001 TGTTTAGGAGGCCATCAGTTCCTTCCTGTGGAGAAGGGTCTGAAATGGAAGTCAGTGGTAGAAGGGGCTGGTCTGCTGGG
2081 CAGGGCTTACATCCACTGAGTTCTAAGATTCCTTTCCTGATCTGCACCTACGCCTGGTCTGTATGGTGGAATTTGTCAGC
2161 TGGAACTCAGAAACAACAACTTGAAAAAAAAATAATAATTAGAACATATTTGCATAAGATAGCTATTTACTCTGGAAACC
2241 AACAACTTTTGAGATTTCCCTTGCCCTGTGGACGCCCAGCTCCTGTCATCCTTCCTTAGGTCCTGCAGTACAGTCTTCCC
2321 CTGAATGCCACCGGGGACCCAGGGGGACTCCACCCCCCTAAGCAAGCACACACATACTCACAGTTGATGAGTTGCTGGTC
2401 TTTGAGTCCCAGCTCTCTTACCCTCCCTTTACTCCACCAGCCCGACGACCCATGACTGAGGAGGGGATTTCTACAGTCTC
2481 AGGATTTAGAAAGTCTGTAAGCCATCCATGCTCCAGAAAGCACCGATCTGTTGTAGTTGCAAAAACAACTCTGTAATTTG
2561 TTGAGGTTCTCAAACTGACAGCCAGCGAGACTGGGTGGGAGGCCCTGGATCTGTTCTCCCTGACTGCGGGAGGAGCAGCC
2641 ACTAGGACTTTAGCAGGAAGCCCACATGGAGGCTCCGCCAGGCTGTGGCCCAGCTGGTGATGGCCCTTTTGCTCCTGGCA
2721 GCCTGAGGCACAGCTGCCTGTATTGTCCTCATCTGTTCTGACTGAAGGATGGAGGTGCTGAATAAATTAGGCCTCAGGCC
2801 TCTACCACCAGAGAGCTGGAGAATGGGTCCACGTCATTCAAGGACCTGAATTTTTTATGCTCAGGAGCATTGGAATCCTC
2881 TTCTTCCAGGGAGGAATTAGCCTGCAAGGTTAGGACTTGAAGAGGGAAGGTATTTAATAACTGGGCGAGGATGGGTGTGG
2961 TGGCTCACACCTGTAATCCCAGCATTTTGGGAGGCTGAGGTGGCCAGATCCCAAGGTCAGAAGATCGAGACCATCCTGGC
3041 TAACATGGTGAAACCCCATCTCTACTAAAAATACAAAAAAAAATTAGCCGGGGGTGGTGGCGGGTACCTGTAGTCCTAGC
3121 TACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCAAGATCGTGCCACTGCACT
3201 CCAGCCTGGGCGACAGAGCAAGACTCCGTCTCAAAAAATAAAAAAAAAAAAAAAATAGGTGAAAATTCCTTATAAATCCA
3281 GGATTGGCTCTGAGAGAACTGGCTAAGATTCAGGAAGAAACAAAAAATTCAGAATCCTACAAGGTTTTGATGACAATTAG
3361 GGCCAAAATTTTAGGAGGAGATGTAGGATGCAGGAGAAAATTAAAGTGTTTTCTTTATATCAGAGGAGGAAATAGTAGAG
3441 GTCAGTGAAGGTCTGGGGTAGGGAAACATTCAGACTGTCCATTGCATGGCTGTGGAGTGAGACTGCCCTTAGCCTGGGTC
3521 AGCCTTCCTGGGCCATAAATTGGGCATCCGTGATGCTAGGTAACTGTGGGAACAAAATGACAGCTTAGAGCAGCCATGGG
3601 TGATGTTTGGTGGTAAAAAACCTACAGGCGTTTGGGGTCCCATGATTGTTCCAGACCATGACTCTTCCTGGTTGTGGGTT
3681 TGTTACAGAGCAGGAGAAGCAGAGGTTATGACAGTTATGCAGACTTTCCCCCTCCTTTTTCTCTTTTCTCTTCCCCTTGC
3761 TTTTCCACTGTTTCTTCCTGCTGCCACCTGGGCCTTGAATTCCTGGGCTGTGAAGACATGTAGCAGCTGCAGGGTTTACC
3841 ACACGTGGGAGGGCAGCCCAGTACTGTCCCTCTGCCTTCCCCACTTTGAGAATATGGCAGCCCCTTTCATTCCTGGCTTG
3921 GGGTAGGGGAGACCATTGAAGTAGAAGCCTCAAAGCAGACTTTTCCCTTTACTGTGTGTACTCCAGGACGAAGAAGGAAG
4001 ATCATGCTTGATACTTAGATTGGTTTTCCCAGGGAAGAGGGCGGAGCAGAGCAAAGTCACTGTGAACCCTGGGCCAGGCC
4081 CTGGCTGGGCCAGCTCCTGAGAGCGTCTCGTGTTGCAGACCCTTGCCCACTTCACCCACCTGCACCTTCTCCCCCTCTCA
4161 CAGTGTCACTGCTGCTAATGGTCAAAGTCAAATGTGTGGCCACATGGGATGGGCCAGGTCCTCTCAGGCTACTTTCTGGA
4241 TGTCATTTTTAAAATATGGAAACATGCAGGTGCCTTCCCAAAGAGGCTTGGACTGGTATATCCAACGAGAAACAAATAAG
4321 CTAAAGAAAGTTTAAACTCAAGAAGAAAGATGTTGACAGTCTATGTAACAGCTGGAAAGTTTATAGGCACCCACCTTTGG
4401 GACAACCCAGTGATTATGAACATGTGATATCTACTATTTAAAAGAAATGTTCTCACCTTGGGTTGATTGTGGTATACCAT
4481 GTGTTATGAAAATTGTTGAGCTGAAGCTTTGAATCGATTTAGTTGAGTCTGACTCACTTGCTTTGGTTCCTGTGTATTTT
4561 ACTACCCCTCTTGTCAGTGACCTTCCTTCCCCACCCCACCCAGAGTGAATTTGTAGCATGATTGTATAAACCTCTATGTA
4641 GAAAATGGAGATTTCTTGCTCTGAAATGTTAAGCTCTAACTGATCCATTTCTGTGTCCTTTAGCCTAGTATGTCTGAACT
4721 TCCATTCTTGTTATATATTTAAACTTTCCCTCTATATTATAGGTTTTGTGGCATCCACGGTCAGGTGTAGAGGAAGCTGC
4801 CCCTTGCAGAACTGTACTGTAATATTTTTCTTTTATAAATATTTTCACAGGACTGATTGTACACAGGGCTTGTAATAAAA
4881 TTTTAACACTGTGCTGTGAAACAACTATGGGGAATCTCCATTGAAGGCTACTTCATGGGCACCTGAAAGTGGAGTGTTAT
4961 AGCTATGACTTTCTATTTCTTGTTTCCTAAGTAAATTAAACCTAATTTTCACCCTTTCATTCTGTTTCAGCCTCCTGTAT
5041 AAGAAGTACCGTATTTTCTGCCCATCATACTTTGTAATAAAACTTGAACATGTATAGATTGACTGAAAAAAAAAAAAAAA
5121 AA
Target sites
Provided by authors
Predicted by miRanda
DRVs
SNPs
DRVs & SNPs
|
miRNA-target interactions (Predicted by miRanda) |
ID |
Duplex structure |
Position |
Score |
MFE |
1
|
miRNA 3' ggAGGGUG--GGUGAGGGAGu 5'
||::|: :| |||||||
Target 5' tgTCTTATAGTC-CTCCCTCt 3'
|
544 - 563
|
146.00 |
-17.70 |
2
|
miRNA 3' ggAGGGUGGGUGAGGGAGu 5'
| :|| || |||:|||
Target 5' ccTGTCAACCCCTCTCTCc 3'
|
1300 - 1318
|
141.00 |
-22.00 |
3
|
miRNA 3' ggAGGGUGGGUGAGGGAGu 5'
||::||| ||||||:
Target 5' tcTCTTACC--CTCCCTTt 3'
|
2414 - 2430
|
141.00 |
-21.30 |
|
DRVs in gene 3'UTRs |
|
SNPs in gene 3'UTRs |
|