miRTarBase - #MIRT213827


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pre-miRNA Information
pre-miRNA hsa-mir-5692a-1   
Genomic Coordinates chr7: 97963658 - 97963726
Description Homo sapiens miR-5692a-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-5692a-2   
Genomic Coordinates chr8: 12719132 - 12719190
Description Homo sapiens miR-5692a-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5692a
Sequence 8| CAAAUAAUACCACAGUGGGUGU |29
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1187568319 2 dbSNP
rs1223754367 2 dbSNP
rs1346298638 4 dbSNP
rs1260139299 10 dbSNP
rs781131392 10 dbSNP
rs962711932 10 dbSNP
rs374073347 11 dbSNP
rs1343259871 11 dbSNP
rs1302081482 12 dbSNP
rs1473743752 13 dbSNP
rs1310584018 13 dbSNP
rs549184834 17 dbSNP
rs980807901 21 dbSNP
rs1346526277 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol SMARCAD1   
Synonyms ADERM, BASNS, ETL1, HEL1
Description SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Transcript NM_001128429   
Other Transcripts NM_001128430 , NM_020159   
Expression
Putative miRNA Targets on SMARCAD1
3'UTR of SMARCAD1
(miRNA target sites are highlighted)		 
>SMARCAD1|NM_001128429|3'UTR
   1 AATAAGAACTGTGAACTCTCAATTGATGAGGAAATATCAACTTGGTGCACTCAAGGACATTTACATTATGATGACCATGG
  81 GGTTTATGAACATTTATAACTTTTTATAATTTCCATATTACATTTCTCATAGTATGGACAACTTTTTGCCACTAACTGAA
 161 TTCTCCAAATACTCACACGTGAAATTTCAAAAAAGAAGCCACAAATATGTAGTTCTGAAGATGTTGAATAATCATTTTAC
 241 AAAGCAGTTTTCTGAATGGGGATTAGTTGGTGATTGTTTGTAACAAATATGCTAATGCTTTAGAAATGTCAGTATTTTTG
 321 TAATTATTTCTACCTCCAAATATATATATATTGTCTTTCACTGGATAATGTGTGTAGATTTTTACATGTGCCTTATTTGA
 401 CAATGCTTATGTCTTGTTTTTGCTTGTCTCATTTGAAGTTCTTTTTTATTATGTTAAAGAATGCAGCTGTATAGATTATA
 481 TAGCTTTCATTTTATTGCTATTTGAAGCAGATGTTCACCAATGTCAGCAAGAACTCAACCTGAATTTAAAGGTGGCATTC
 561 CATATACTAACATCCCCCAGGTCCTCTCAAGTACTTCTGCTGAAACAAATTTATTTGGCTAGGCACTAAGTTGTTTTCCA
 641 GTGAATAGTAACTAAAGAAGCCCCTACCTTGCTCCATGGATTAATTCCTTCTGTTCATTTTCCAACTGCACTAATTGTGC
 721 ATATTACTCTGCCTAATCTTGTGCATGTTTTCATTGATTTCCCTCTCCCGGCTTTTGCTTCTCTTGAAACTGTTGCCCAG
 801 TCACTTCTGCTCCAATTCTCTTCCTCTCTAAATAGTAGTTTATTACTGCCACATCTCCATGCATCAGCAAAATGTTGGTG
 881 ACATTTTTCTAGCCTGGCAGAACAGATTACTTAAAGCTATTTCATTTCAAAGCAGACTGAATGTGACTTCATCTAAAGGC
 961 AGCATTAGGTACTGCATGGAAATAGGTCATTAACTTGAAACTCTTATCAAAATATATTTTACCAGTTTCCAGAATTTCCA
1041 GTACAGGACCGCCTGAAGAGAGAGCCATTGTTCAATTCCAATTCAGTGTGAGTGACAAAGTGAAATTTAGAAGTGAAGTT
1121 GTCTATTTGATATTTAACTCTTTATTAAATCTTTCTTTAAATTTCTGCCTGTCAGTCTATATTGCTGTTTTTATTATACA
1201 TCAGTTTCTTTGTATAACTTGTGAGTTCCATGTGTTTTGTTTTTATTATGTAAATATCATTATAAATAAACTTATTTATA
1281 AATCAAAGATTTGTTAATTTTTGGAAATCATGCTTTTCAAAGCATCCTAACTTGCTAAGATGCTAGGTAGTACGACCCTC
1361 TGGATTTGGAAGGCAAATAAAACTCTTACAGTGATTATTTAGATATTAAAGACTGAGAACTCACGGCTTAACCCCAGTCT
1441 TGATGGTATATTGAACAGACTGAATATATTTTACCATTACAGGGCTAAAAGGAGTCTTCATGTGTTAATACTACCTCCTT
1521 GTACATCACTATACCCAAATCAGTTATTCAAATTGTTAGGAATTTTACCTTTTAAAATCTCATAATGGATATCTCATGTT
1601 TTCTGTATTAATGTATTTTCAATGATAGGCTGTTTCTTTTTTTGTTGTTATTGTTGTTGTTGTTATATCCATACTTTTAT
1681 CTCTAATGAAATGTAGTTGGGTTCTTCCTGTAATGCGCTATTATGTCTTGGGCTTAATAAAAATATTTGTGATCATAAAA
1761 AAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uguGGGUGACACCAUAAUAAAc 5'
             |::|| |||  ||||||| 
Target 5' actCTTACAGTG--ATTATTTa 3'
 1382 - 1401 159.00 -7.80
2 
miRNA  3' uguggGUGACACCA-UAAUAAAc 5'
               :|:| | || ||||||| 
Target 5' gtcagTATTTTTGTAATTATTTc 3'
 308 - 330 153.00 -5.10
3 
miRNA  3' ugugGGUGACACCA-UAAUAAAc 5'
              ::| | |||| |||:||| 
Target 5' gggaTTAGT-TGGTGATTGTTTg 3'
 259 - 280 137.00 -9.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26995705 16 COSMIC
COSN30121651 34 COSMIC
COSN30535226 76 COSMIC
COSN30103084 77 COSMIC
COSN30120207 80 COSMIC
COSN6849923 102 COSMIC
COSN30129121 105 COSMIC
COSN30483904 122 COSMIC
COSN30156317 164 COSMIC
COSN14130891 180 COSMIC
COSN31589513 208 COSMIC
COSN24522613 235 COSMIC
COSN30140473 246 COSMIC
COSN31526504 287 COSMIC
COSN31551327 352 COSMIC
COSN31583253 401 COSMIC
COSN31589052 423 COSMIC
COSN8491588 664 COSMIC
COSN31549919 679 COSMIC
COSN31607998 782 COSMIC
COSN31480557 890 COSMIC
COSN31596125 1092 COSMIC
COSN31480901 1141 COSMIC
COSN31588056 1175 COSMIC
COSN31568710 1209 COSMIC
COSN31608585 1293 COSMIC
COSN19553656 1500 COSMIC
COSN24300431 1560 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1332399819 3 dbSNP
rs181564356 5 dbSNP
rs1260884929 8 dbSNP
rs1382376036 10 dbSNP
rs557957548 10 dbSNP
rs1289471949 11 dbSNP
rs1016385704 19 dbSNP
rs772177399 20 dbSNP
rs367775203 21 dbSNP
rs770973948 23 dbSNP
rs778363583 24 dbSNP
rs185642584 27 dbSNP
rs1255919349 29 dbSNP
rs1386854613 35 dbSNP
rs1326612361 38 dbSNP
rs79225572 48 dbSNP
rs1160108710 50 dbSNP
rs531081006 53 dbSNP
rs1019571437 57 dbSNP
rs966229825 59 dbSNP
rs752538186 60 dbSNP
rs1215702549 62 dbSNP
rs1360848663 66 dbSNP
rs749713437 68 dbSNP
rs368603057 69 dbSNP
rs762867704 73 dbSNP
rs1035809941 74 dbSNP
rs1415388885 75 dbSNP
rs1314645022 76 dbSNP
rs763810912 81 dbSNP
rs1395185025 83 dbSNP
rs751159247 85 dbSNP
rs1318308438 86 dbSNP
rs3834224 93 dbSNP
rs756890814 95 dbSNP
rs749983610 101 dbSNP
rs766653523 108 dbSNP
rs1383939757 114 dbSNP
rs1213726146 116 dbSNP
rs755446647 118 dbSNP
rs535989853 121 dbSNP
rs551202975 123 dbSNP
rs778954921 123 dbSNP
rs112730246 127 dbSNP
rs920977730 129 dbSNP
rs779461963 138 dbSNP
rs1252961713 143 dbSNP
rs748446890 146 dbSNP
rs1178231159 161 dbSNP
rs1395842449 164 dbSNP
rs772420935 165 dbSNP
rs778002631 166 dbSNP
rs1357313417 169 dbSNP
rs200998764 171 dbSNP
rs748356632 171 dbSNP
rs1298577277 177 dbSNP
rs771297342 178 dbSNP
rs189958784 179 dbSNP
rs145778087 180 dbSNP
rs978712404 183 dbSNP
rs1264603692 186 dbSNP
rs200476496 189 dbSNP
rs546258454 190 dbSNP
rs1312079210 193 dbSNP
rs772288996 194 dbSNP
rs762805381 196 dbSNP
rs566104872 202 dbSNP
rs1198258005 204 dbSNP
rs1253805554 205 dbSNP
rs1455661050 207 dbSNP
rs148873580 209 dbSNP
rs751333678 213 dbSNP
rs1432572854 216 dbSNP
rs761506359 222 dbSNP
rs923326879 224 dbSNP
rs1463803614 228 dbSNP
rs1252317575 229 dbSNP
rs1330281379 234 dbSNP
rs933433390 237 dbSNP
rs1394705222 241 dbSNP
rs564644232 248 dbSNP
rs1272612203 250 dbSNP
rs1366259614 259 dbSNP
rs1347274796 260 dbSNP
rs939159274 267 dbSNP
rs749930466 268 dbSNP
rs1475213747 271 dbSNP
rs1298288345 274 dbSNP
rs1460136026 276 dbSNP
rs1316462681 278 dbSNP
rs1198353499 282 dbSNP
rs755677104 284 dbSNP
rs895205229 290 dbSNP
rs555204593 291 dbSNP
rs942279780 295 dbSNP
rs1470028092 299 dbSNP
rs1212036676 311 dbSNP
rs1176470179 323 dbSNP
rs1481134725 329 dbSNP
rs1246263879 333 dbSNP
rs1168869050 339 dbSNP
rs775519810 340 dbSNP
rs1486231538 342 dbSNP
rs1187040452 344 dbSNP
rs372439025 345 dbSNP
rs1476729226 347 dbSNP
rs1037884597 348 dbSNP
rs1169646971 349 dbSNP
rs1418266961 356 dbSNP
rs1010934263 361 dbSNP
rs1462733830 362 dbSNP
rs1321158995 369 dbSNP
rs1043731374 370 dbSNP
rs1430751124 371 dbSNP
rs1291167678 372 dbSNP
rs906127464 377 dbSNP
rs1479752084 388 dbSNP
rs1339038888 390 dbSNP
rs1285675368 394 dbSNP
rs1218535117 396 dbSNP
rs377014080 397 dbSNP
rs1294346298 403 dbSNP
rs1337394008 404 dbSNP
rs765886713 410 dbSNP
rs1289337375 414 dbSNP
rs1325771994 416 dbSNP
rs1317604266 417 dbSNP
rs902519256 418 dbSNP
rs1000220529 419 dbSNP
rs1019161738 420 dbSNP
rs966615570 421 dbSNP
rs996337856 422 dbSNP
rs1395238195 425 dbSNP
rs1383788291 427 dbSNP
rs1028090741 429 dbSNP
rs180739184 431 dbSNP
rs1403264082 439 dbSNP
rs1175135644 442 dbSNP
rs1265281824 442 dbSNP
rs1487290648 451 dbSNP
rs983867450 453 dbSNP
rs1057315644 457 dbSNP
rs572893362 460 dbSNP
rs895544770 463 dbSNP
rs1161111388 464 dbSNP
rs1412561990 472 dbSNP
rs1400813687 473 dbSNP
rs1184424065 476 dbSNP
rs537632304 477 dbSNP
rs1358054798 479 dbSNP
rs961034848 484 dbSNP
rs778146732 485 dbSNP
rs747378154 489 dbSNP
rs1357761374 499 dbSNP
rs770136532 500 dbSNP
rs777220490 501 dbSNP
rs760541957 503 dbSNP
rs757552049 507 dbSNP
rs1315555302 514 dbSNP
rs781625529 521 dbSNP
rs746108780 522 dbSNP
rs1353059445 535 dbSNP
rs769929049 538 dbSNP
rs1280888168 539 dbSNP
rs1443951915 552 dbSNP
rs1185093420 554 dbSNP
rs1236649822 557 dbSNP
rs1470338725 558 dbSNP
rs1180112972 561 dbSNP
rs775464725 563 dbSNP
rs746399505 565 dbSNP
rs1174828509 566 dbSNP
rs1377742347 567 dbSNP
rs1413150324 568 dbSNP
rs1333964770 569 dbSNP
rs879869158 576 dbSNP
rs1336705025 580 dbSNP
rs1444708482 582 dbSNP
rs749200696 584 dbSNP
rs1160812585 585 dbSNP
rs11541128 586 dbSNP
rs1376256418 589 dbSNP
rs1235053734 590 dbSNP
rs1304109437 591 dbSNP
rs1018162936 595 dbSNP
rs1347090041 597 dbSNP
rs768526431 598 dbSNP
rs976962407 604 dbSNP
rs922489981 605 dbSNP
rs1277731622 609 dbSNP
rs1480864365 609 dbSNP
rs1438183433 610 dbSNP
rs916398368 615 dbSNP
rs954938559 623 dbSNP
rs983592856 625 dbSNP
rs528754759 627 dbSNP
rs1447673531 637 dbSNP
rs1375664606 640 dbSNP
rs1438561713 641 dbSNP
rs1455140021 647 dbSNP
rs1193667465 655 dbSNP
rs1378825760 658 dbSNP
rs958147519 661 dbSNP
rs1477354586 663 dbSNP
rs1292197871 664 dbSNP
rs1247924147 666 dbSNP
rs1043782738 667 dbSNP
rs902530532 668 dbSNP
rs1397740070 670 dbSNP
rs557964859 674 dbSNP
rs1329589862 677 dbSNP
rs1327666058 685 dbSNP
rs941996664 694 dbSNP
rs761663278 696 dbSNP
rs1328062966 697 dbSNP
rs1329408700 698 dbSNP
rs1041046841 706 dbSNP
rs902066824 712 dbSNP
rs28491758 717 dbSNP
rs1383564131 721 dbSNP
rs1274110311 722 dbSNP
rs1339849203 724 dbSNP
rs1162880318 730 dbSNP
rs1220185006 736 dbSNP
rs1029203185 737 dbSNP
rs952181501 741 dbSNP
rs1457070137 742 dbSNP
rs1005311667 746 dbSNP
rs1213902552 757 dbSNP
rs1016653854 762 dbSNP
rs1037685618 763 dbSNP
rs1269554414 764 dbSNP
rs927523314 766 dbSNP
rs186470558 770 dbSNP
rs547244591 771 dbSNP
rs62320431 774 dbSNP
rs1479025937 783 dbSNP
rs1214791694 787 dbSNP
rs1169039378 791 dbSNP
rs1057479450 797 dbSNP
rs972396852 801 dbSNP
rs1462218841 803 dbSNP
rs765368591 816 dbSNP
rs1010391628 819 dbSNP
rs960680995 821 dbSNP
rs746573545 823 dbSNP
rs1388679446 824 dbSNP
rs1304295864 827 dbSNP
rs1386227935 829 dbSNP
rs1322841280 838 dbSNP
rs1041452588 839 dbSNP
rs1401729319 841 dbSNP
rs904273659 844 dbSNP
rs765833133 845 dbSNP
rs753306934 847 dbSNP
rs752564295 849 dbSNP
rs758913542 854 dbSNP
rs1266775230 861 dbSNP
rs999836294 866 dbSNP
rs112073148 870 dbSNP
rs1166187219 873 dbSNP
rs764580020 876 dbSNP
rs562252318 884 dbSNP
rs1477537406 885 dbSNP
rs1489585046 899 dbSNP
rs1429835829 901 dbSNP
rs1192112146 912 dbSNP
rs553205623 915 dbSNP
rs1475704049 920 dbSNP
rs1167195025 924 dbSNP
rs1366891632 925 dbSNP
rs8336 926 dbSNP
rs1159257671 927 dbSNP
rs781696104 929 dbSNP
rs1362510337 934 dbSNP
rs1421498000 936 dbSNP
rs964292639 938 dbSNP
rs1296261750 939 dbSNP
rs1490579081 940 dbSNP
rs777387325 943 dbSNP
rs1270453658 950 dbSNP
rs1222101888 951 dbSNP
rs1415105563 952 dbSNP
rs1314457738 956 dbSNP
rs1338378140 961 dbSNP
rs1243586957 964 dbSNP
rs1323614393 969 dbSNP
rs548301906 970 dbSNP
rs1355223101 971 dbSNP
rs1225859271 975 dbSNP
rs1215096792 980 dbSNP
rs746855496 982 dbSNP
rs1285865962 990 dbSNP
rs1366178930 992 dbSNP
rs1443421481 998 dbSNP
rs780159797 998 dbSNP
rs951213276 1001 dbSNP
rs1327112633 1003 dbSNP
rs982583903 1004 dbSNP
rs907941707 1005 dbSNP
rs749367981 1007 dbSNP
rs376831808 1008 dbSNP
rs1468144178 1011 dbSNP
rs1484944264 1013 dbSNP
rs1382321156 1015 dbSNP
rs369241783 1016 dbSNP
rs774213888 1017 dbSNP
rs1359764676 1023 dbSNP
rs979491259 1024 dbSNP
rs1304424162 1026 dbSNP
rs927342863 1029 dbSNP
rs1231020536 1032 dbSNP
rs1177624976 1033 dbSNP
rs924028077 1044 dbSNP
rs192105063 1051 dbSNP
rs1057405093 1052 dbSNP
rs562366146 1054 dbSNP
rs576574131 1057 dbSNP
rs1353265274 1065 dbSNP
rs1237266230 1066 dbSNP
rs1309215166 1079 dbSNP
rs771786434 1081 dbSNP
rs773018992 1082 dbSNP
rs1446285210 1087 dbSNP
rs1383862888 1089 dbSNP
rs1338724119 1090 dbSNP
rs1254681955 1093 dbSNP
rs1358449369 1093 dbSNP
rs1159729581 1097 dbSNP
rs1483124395 1097 dbSNP
rs183872142 1111 dbSNP
rs1291496748 1113 dbSNP
rs1240197700 1114 dbSNP
rs1437926381 1115 dbSNP
rs946196068 1119 dbSNP
rs1181137888 1121 dbSNP
rs1395744721 1124 dbSNP
rs765993436 1126 dbSNP
rs188829387 1133 dbSNP
rs559296104 1134 dbSNP
rs1465312807 1136 dbSNP
rs759029618 1144 dbSNP
rs1239903718 1145 dbSNP
rs1401977658 1147 dbSNP
rs768297758 1150 dbSNP
rs1317763129 1156 dbSNP
rs1360343468 1160 dbSNP
rs1330151969 1168 dbSNP
rs1289566201 1170 dbSNP
rs1367677284 1170 dbSNP
rs776670139 1171 dbSNP
rs1299735188 1176 dbSNP
rs761820406 1178 dbSNP
rs904242584 1180 dbSNP
rs1425066911 1182 dbSNP
rs1311986808 1185 dbSNP
rs1386643515 1200 dbSNP
rs1219577021 1201 dbSNP
rs61741696 1203 dbSNP
rs191527262 1205 dbSNP
rs1422944796 1209 dbSNP
rs751947953 1212 dbSNP
rs1198236707 1214 dbSNP
rs1253781035 1216 dbSNP
rs1006369938 1217 dbSNP
rs1261693944 1220 dbSNP
rs1489467594 1221 dbSNP
rs1192866964 1230 dbSNP
rs1216272750 1231 dbSNP
rs1490612304 1233 dbSNP
rs1422921396 1235 dbSNP
rs1219609744 1237 dbSNP
rs1321404216 1243 dbSNP
rs1432417781 1246 dbSNP
rs182641818 1249 dbSNP
rs1425475625 1251 dbSNP
rs1463784652 1253 dbSNP
rs896931115 1256 dbSNP
rs1169507280 1259 dbSNP
rs1349961105 1262 dbSNP
rs377525317 1263 dbSNP
rs1437915025 1264 dbSNP
rs1367198677 1268 dbSNP
rs994303875 1272 dbSNP
rs767945107 1273 dbSNP
rs1238407112 1279 dbSNP
rs750869449 1289 dbSNP
rs186893633 1290 dbSNP
rs1280556032 1291 dbSNP
rs1476563428 1292 dbSNP
rs756375130 1295 dbSNP
rs546643124 1300 dbSNP
rs1422367884 1305 dbSNP
rs1290788912 1311 dbSNP
rs990705597 1321 dbSNP
rs1385780415 1325 dbSNP
rs1323606931 1328 dbSNP
rs1029543642 1336 dbSNP
rs1271473966 1339 dbSNP
rs1219416542 1340 dbSNP
rs1488257422 1345 dbSNP
rs1246175084 1347 dbSNP
rs1488146874 1348 dbSNP
rs1443523034 1349 dbSNP
rs1162064071 1351 dbSNP
rs887043270 1354 dbSNP
rs753938349 1355 dbSNP
rs754954648 1356 dbSNP
rs1192494674 1358 dbSNP
rs1414007572 1377 dbSNP
rs1406633176 1378 dbSNP
rs979208218 1380 dbSNP
rs1016754498 1383 dbSNP
rs764897871 1386 dbSNP
rs779054305 1386 dbSNP
rs748035338 1390 dbSNP
rs763210841 1391 dbSNP
rs1373523284 1392 dbSNP
rs555897154 1392 dbSNP
rs764279551 1395 dbSNP
rs976563615 1397 dbSNP
rs1398881490 1399 dbSNP
rs963414279 1399 dbSNP
rs749947951 1401 dbSNP
rs112056744 1404 dbSNP
rs1379917511 1404 dbSNP
rs1285041329 1405 dbSNP
rs973500038 1406 dbSNP
rs1226802867 1408 dbSNP
rs931928503 1409 dbSNP
rs1354493376 1410 dbSNP
rs1228350964 1411 dbSNP
rs1217249052 1412 dbSNP
rs1287998562 1422 dbSNP
rs1257643993 1424 dbSNP
rs780967791 1425 dbSNP
rs767720734 1426 dbSNP
rs1325540314 1427 dbSNP
rs577583797 1428 dbSNP
rs528815456 1435 dbSNP
rs111934128 1437 dbSNP
rs993238504 1438 dbSNP
rs548606599 1440 dbSNP
rs745572334 1443 dbSNP
rs568792741 1444 dbSNP
rs1412450240 1447 dbSNP
rs1439714643 1448 dbSNP
rs538176119 1450 dbSNP
rs917482251 1452 dbSNP
rs1243725309 1461 dbSNP
rs1419597109 1462 dbSNP
rs1335337019 1465 dbSNP
rs146995585 1467 dbSNP
rs946291456 1468 dbSNP
rs373371234 1469 dbSNP
rs1377759409 1471 dbSNP
rs926133321 1472 dbSNP
rs1242341196 1478 dbSNP
rs897986575 1479 dbSNP
rs1351470848 1482 dbSNP
rs1204458549 1484 dbSNP
rs1279148959 1485 dbSNP
rs993966959 1488 dbSNP
rs779712354 1493 dbSNP
rs1207605313 1495 dbSNP
rs571393054 1500 dbSNP
rs8026 1501 dbSNP
rs775163857 1503 dbSNP
rs1377927307 1507 dbSNP
rs933647768 1509 dbSNP
rs762388383 1511 dbSNP
rs1173662573 1512 dbSNP
rs762484446 1514 dbSNP
rs1051216359 1517 dbSNP
rs887018678 1518 dbSNP
rs77484816 1525 dbSNP
rs1333776742 1526 dbSNP
rs1401250691 1531 dbSNP
rs1449235624 1532 dbSNP
rs1329450155 1535 dbSNP
rs1161383140 1540 dbSNP
rs1486182434 1541 dbSNP
rs1376235631 1542 dbSNP
rs1016723158 1548 dbSNP
rs1275312926 1551 dbSNP
rs1352445671 1554 dbSNP
rs878861743 1556 dbSNP
rs1217224414 1563 dbSNP
rs1262249118 1566 dbSNP
rs1315331547 1571 dbSNP
rs1457975400 1583 dbSNP
rs967967849 1585 dbSNP
rs1200130290 1586 dbSNP
rs1235903125 1589 dbSNP
rs1436651667 1590 dbSNP
rs1200212838 1592 dbSNP
rs1364237571 1597 dbSNP
rs1395931708 1599 dbSNP
rs1386341043 1611 dbSNP
rs898370326 1615 dbSNP
rs773406769 1620 dbSNP
rs113439733 1622 dbSNP
rs761002026 1623 dbSNP
rs1424757512 1625 dbSNP
rs1467432447 1627 dbSNP
rs1225138810 1630 dbSNP
rs1366776320 1633 dbSNP
rs1186963137 1634 dbSNP
rs1168712792 1637 dbSNP
rs542240185 1639 dbSNP
rs1214112172 1642 dbSNP
rs14696 1645 dbSNP
rs976193183 1645 dbSNP
rs1224208059 1647 dbSNP
rs371817279 1648 dbSNP
rs541284002 1648 dbSNP
rs923325132 1648 dbSNP
rs1398758228 1651 dbSNP
rs367695955 1651 dbSNP
rs751120943 1651 dbSNP
rs953371437 1651 dbSNP
rs1387378835 1653 dbSNP
rs1208008676 1654 dbSNP
rs1360255191 1656 dbSNP
rs1324162718 1657 dbSNP
rs142282958 1667 dbSNP
rs755258196 1669 dbSNP
rs1304184221 1672 dbSNP
rs992812850 1675 dbSNP
rs1282467024 1677 dbSNP
rs778806350 1678 dbSNP
rs1475792151 1680 dbSNP
rs1220088190 1686 dbSNP
rs1425949640 1687 dbSNP
rs967604294 1691 dbSNP
rs1477475546 1692 dbSNP
rs1338203639 1696 dbSNP
rs552781545 1697 dbSNP
rs1209870505 1699 dbSNP
rs1037014712 1708 dbSNP
rs1291361483 1709 dbSNP
rs776832250 1711 dbSNP
rs759758613 1714 dbSNP
rs977706934 1717 dbSNP
rs926102322 1718 dbSNP
rs1195811556 1720 dbSNP
rs1185413912 1721 dbSNP
rs1478974235 1732 dbSNP
rs752819449 1734 dbSNP
rs1372680897 1735 dbSNP
rs1458577646 1748 dbSNP
rs1165125272 1749 dbSNP
rs1388655223 1750 dbSNP
rs1260624699 1753 dbSNP
rs1217313244 1759 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545216. RNA binding protein: AGO2. Condition:miR-124 transfection ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ugugggugacaccaUAAUAAAc 5'
                        ||||||| 
Target 5' ------------uaAUUAUUUc 3'
 		1 - 10
2 
miRNA  3' uguGGGUGACACCAUA-AUAAac 5'
             || | | |  ||| ||||  
Target 5' ccuCCAAAUAU-AUAUAUAUU-- 3'
 		13 - 32
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions MCF7
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated ...

- Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology.

Article - Farazi TA; Ten Hoeve JJ; Brown M; et al.
- Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
CLIP-seq Support 1 for dataset GSM545216
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / miR-124 transfection
Location of target site ENST00000354268.4 | 3UTR | UAAUUAUUUCUACCUCCAAAUAUAUAUAUAUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset SRR1045082
Method / RBP PAR-CLIP / AGO2
Cell line / Condition MCF7 / Untreated
Location of target site ENST00000354268.4 | 3UTR | UAAUUAUUUCUACCUCCAAAUAUAUAUAUAUUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24398324 / SRX388831
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
274 hsa-miR-5692a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT075065 CBFB core-binding factor beta subunit 2 2
MIRT080899 PKN2 protein kinase N2 2 2
MIRT082787 ZNF264 zinc finger protein 264 2 2
MIRT083849 PARD6B par-6 family cell polarity regulator beta 2 4
MIRT085676 EPC2 enhancer of polycomb homolog 2 2 2
MIRT090928 TIPARP TCDD inducible poly(ADP-ribose) polymerase 2 2
MIRT091614 UBE2E1 ubiquitin conjugating enzyme E2 E1 2 2
MIRT096454 SUB1 SUB1 homolog, transcriptional regulator 2 2
MIRT103102 MAFK MAF bZIP transcription factor K 2 4
MIRT103808 PURB purine rich element binding protein B 2 2
MIRT105849 DDHD2 DDHD domain containing 2 2 2
MIRT106130 AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 2 2
MIRT110647 ARID5B AT-rich interaction domain 5B 2 2
MIRT113097 CCND2 cyclin D2 2 4
MIRT115493 RBBP6 RB binding protein 6, ubiquitin ligase 2 2
MIRT116027 DEPDC1 DEP domain containing 1 2 6
MIRT117361 TGIF1 TGFB induced factor homeobox 1 2 2
MIRT162248 PAK2 p21 (RAC1) activated kinase 2 2 2
MIRT170943 FOXK1 forkhead box K1 2 2
MIRT179020 PAFAH1B2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 2 2
MIRT182504 KLHL20 kelch like family member 20 2 2
MIRT183026 CDC73 cell division cycle 73 2 2
MIRT195017 ATXN2L ataxin 2 like 2 2
MIRT198385 VAMP3 vesicle associated membrane protein 3 2 2
MIRT201474 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT203321 CCNT2 cyclin T2 2 2
MIRT206710 FOXN2 forkhead box N2 2 4
MIRT208191 ZNF148 zinc finger protein 148 2 2
MIRT213827 SMARCAD1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 2 4
MIRT229216 XIAP X-linked inhibitor of apoptosis 2 2
MIRT232836 NUPL1 nucleoporin 58 2 2
MIRT243089 CENPA centromere protein A 2 2
MIRT245302 BAMBI BMP and activin membrane bound inhibitor 2 2
MIRT264690 C11ORF57 chromosome 11 open reading frame 57 2 2
MIRT293811 FEM1A fem-1 homolog A 2 2
MIRT295213 ZNF559 zinc finger protein 559 2 2
MIRT300032 WDR35 WD repeat domain 35 2 2
MIRT305179 SLC25A36 solute carrier family 25 member 36 2 2
MIRT310571 DCK deoxycytidine kinase 2 4
MIRT316074 ABRACL ABRA C-terminal like 2 2
MIRT318914 MMS22L MMS22 like, DNA repair protein 2 2
MIRT325184 PSAT1 phosphoserine aminotransferase 1 2 4
MIRT326934 SH3KBP1 SH3 domain containing kinase binding protein 1 2 2
MIRT327064 KLHL15 kelch like family member 15 2 2
MIRT328168 ZNF711 zinc finger protein 711 2 2
MIRT329328 FAM53C family with sequence similarity 53 member C 2 2
MIRT334666 NEK7 NIMA related kinase 7 2 2
MIRT349436 STK35 serine/threonine kinase 35 2 2
MIRT355141 ATP13A3 ATPase 13A3 2 4
MIRT356979 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT359335 TMEM167A transmembrane protein 167A 2 2
MIRT363671 DCTN6 dynactin subunit 6 2 2
MIRT363682 GSR glutathione-disulfide reductase 2 2
MIRT365339 GAS1 growth arrest specific 1 2 6
MIRT368653 ZIC5 Zic family member 5 2 6
MIRT383128 TRAF6 TNF receptor associated factor 6 2 2
MIRT398180 HIF1A hypoxia inducible factor 1 alpha subunit 2 4
MIRT442500 SLC5A7 solute carrier family 5 member 7 2 2
MIRT443174 UBL3 ubiquitin like 3 2 2
MIRT443221 TRDMT1 tRNA aspartic acid methyltransferase 1 2 2
MIRT443268 ZWINT ZW10 interacting kinetochore protein 2 2
MIRT443523 NETO1 neuropilin and tolloid like 1 2 2
MIRT443770 HLF HLF, PAR bZIP transcription factor 2 2
MIRT443799 SREBF2 sterol regulatory element binding transcription factor 2 2 2
MIRT444580 NCOA4 nuclear receptor coactivator 4 2 2
MIRT446459 ARID1B AT-rich interaction domain 1B 2 2
MIRT447067 MCC mutated in colorectal cancers 2 2
MIRT448422 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT448872 FAM117B family with sequence similarity 117 member B 2 2
MIRT449378 ANTXR2 anthrax toxin receptor 2 2 2
MIRT449687 GABRA3 gamma-aminobutyric acid type A receptor alpha3 subunit 2 2
MIRT449891 ZNF621 zinc finger protein 621 2 2
MIRT449972 ZNF555 zinc finger protein 555 2 2
MIRT450466 ENOX1 ecto-NOX disulfide-thiol exchanger 1 2 2
MIRT451338 ZNF573 zinc finger protein 573 2 2
MIRT452082 ATP6V0B ATPase H+ transporting V0 subunit b 2 2
MIRT452209 TMEM68 transmembrane protein 68 2 4
MIRT454559 WARS tryptophanyl-tRNA synthetase 2 2
MIRT456303 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT456870 ZNF460 zinc finger protein 460 2 10
MIRT460902 UBE2S ubiquitin conjugating enzyme E2 S 2 2
MIRT462880 ZXDB zinc finger, X-linked, duplicated B 2 6
MIRT464233 VEGFA vascular endothelial growth factor A 2 6
MIRT465158 TSC22D2 TSC22 domain family member 2 2 2
MIRT465864 TMEM50B transmembrane protein 50B 2 2
MIRT468208 SGK1 serum/glucocorticoid regulated kinase 1 2 2
MIRT472139 NLK nemo like kinase 2 2
MIRT475606 HMGB2 high mobility group box 2 2 2
MIRT476430 GBA2 glucosylceramidase beta 2 2 2
MIRT477012 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT477906 DVL3 dishevelled segment polarity protein 3 2 4
MIRT478716 CSNK1A1 casein kinase 1 alpha 1 2 4
MIRT479156 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT492261 SLC30A1 solute carrier family 30 member 1 2 4
MIRT494273 CEP120 centrosomal protein 120 2 2
MIRT494806 AKAP11 A-kinase anchoring protein 11 2 12
MIRT498113 PLEKHO1 pleckstrin homology domain containing O1 2 4
MIRT498252 PTMA prothymosin, alpha 2 2
MIRT498896 RBM12B RNA binding motif protein 12B 2 2
MIRT499100 DENND4C DENN domain containing 4C 2 8
MIRT500441 ZMAT3 zinc finger matrin-type 3 2 2
MIRT501592 PLCG1 phospholipase C gamma 1 2 2
MIRT501906 MED13 mediator complex subunit 13 2 2
MIRT502300 GNG12 G protein subunit gamma 12 2 6
MIRT503604 ZNF780A zinc finger protein 780A 2 2
MIRT504002 NHS NHS actin remodeling regulator 2 2
MIRT504131 RCC1 regulator of chromosome condensation 1 2 6
MIRT504749 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT504921 CD38 CD38 molecule 2 4
MIRT505301 TPD52 tumor protein D52 2 2
MIRT505327 TMF1 TATA element modulatory factor 1 2 8
MIRT507009 HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 2 4
MIRT507064 H3F3B H3 histone family member 3B 2 2
MIRT507308 FEM1B fem-1 homolog B 2 2
MIRT508045 ATXN1 ataxin 1 2 6
MIRT510379 ZNF703 zinc finger protein 703 2 6
MIRT510493 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT511127 NAP1L1 nucleosome assembly protein 1 like 1 2 4
MIRT511132 NABP1 nucleic acid binding protein 1 2 6
MIRT514497 STOML1 stomatin like 1 2 2
MIRT514753 ACER3 alkaline ceramidase 3 2 4
MIRT515389 RPL7 ribosomal protein L7 2 2
MIRT515824 FOCAD focadhesin 2 2
MIRT516611 LRP2BP LRP2 binding protein 2 4
MIRT518202 CLEC4E C-type lectin domain family 4 member E 2 2
MIRT519195 NAA38 LSM8 homolog, U6 small nuclear RNA associated 2 6
MIRT520800 TBCEL tubulin folding cofactor E like 2 4
MIRT523046 ID2 inhibitor of DNA binding 2, HLH protein 2 2
MIRT523901 EMC7 ER membrane protein complex subunit 7 2 8
MIRT525507 DDIT3 DNA damage inducible transcript 3 2 2
MIRT525861 ARL13B ADP ribosylation factor like GTPase 13B 2 2
MIRT526108 PARP2 poly(ADP-ribose) polymerase 2 2 4
MIRT526454 FAM71F2 family with sequence similarity 71 member F2 2 4
MIRT526474 C4orf36 chromosome 4 open reading frame 36 2 2
MIRT526514 POU5F1B POU class 5 homeobox 1B 2 2
MIRT528125 CNNM3 cyclin and CBS domain divalent metal cation transport mediator 3 2 4
MIRT528413 MEAF6 MYST/Esa1 associated factor 6 2 2
MIRT528597 AVPI1 arginine vasopressin induced 1 2 2
MIRT528994 ISLR2 immunoglobulin superfamily containing leucine rich repeat 2 2 4
MIRT529037 GSDMB gasdermin B 2 4
MIRT529058 KRBOX4 KRAB box domain containing 4 2 2
MIRT529320 PDE5A phosphodiesterase 5A 2 2
MIRT529375 SKP1 S-phase kinase associated protein 1 2 4
MIRT529873 PSMG1 proteasome assembly chaperone 1 2 4
MIRT530506 FUT1 fucosyltransferase 1 (H blood group) 2 2
MIRT531137 POLR3K RNA polymerase III subunit K 2 4
MIRT531394 TXNDC16 thioredoxin domain containing 16 2 4
MIRT531807 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT531905 GLP2R glucagon like peptide 2 receptor 2 2
MIRT532120 G6PC glucose-6-phosphatase catalytic subunit 2 2
MIRT532143 ZNF764 zinc finger protein 764 2 2
MIRT532899 ZNF451 zinc finger protein 451 2 2
MIRT532994 ZKSCAN8 zinc finger with KRAB and SCAN domains 8 2 2
MIRT533290 UST uronyl 2-sulfotransferase 2 2
MIRT533355 UBE2W ubiquitin conjugating enzyme E2 W 2 4
MIRT534052 STC2 stanniocalcin 2 2 2
MIRT535252 PIGA phosphatidylinositol glycan anchor biosynthesis class A 2 4
MIRT535404 PER1 period circadian clock 1 2 2
MIRT536150 MAP7 microtubule associated protein 7 2 2
MIRT536278 LMOD2 leiomodin 2 2 2
MIRT536440 KMT2B lysine methyltransferase 2B 2 6
MIRT536772 HOOK3 hook microtubule tethering protein 3 2 4
MIRT536930 HECW1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 2 2
MIRT537014 GTF2A1 general transcription factor IIA subunit 1 2 4
MIRT537091 GPR137C G protein-coupled receptor 137C 2 2
MIRT537195 GDE1 glycerophosphodiester phosphodiesterase 1 2 4
MIRT537272 GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 2 2
MIRT537604 ESRP2 epithelial splicing regulatory protein 2 2 2
MIRT538174 DCDC2 doublecortin domain containing 2 2 2
MIRT538338 CSE1L chromosome segregation 1 like 2 4
MIRT538831 C16orf87 chromosome 16 open reading frame 87 2 2
MIRT539895 IRGQ immunity related GTPase Q 2 2
MIRT543225 ACTR6 ARP6 actin related protein 6 homolog 2 2
MIRT543227 ZNF611 zinc finger protein 611 2 2
MIRT543293 ZNF585B zinc finger protein 585B 2 2
MIRT543363 MAT2B methionine adenosyltransferase 2B 2 2
MIRT543544 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT543624 EXOSC6 exosome component 6 2 2
MIRT544284 NPR1 natriuretic peptide receptor 1 2 2
MIRT544359 EGLN1 egl-9 family hypoxia inducible factor 1 2 2
MIRT544415 HIST1H3E histone cluster 1 H3 family member e 2 2
MIRT544837 PLA2G16 phospholipase A2 group XVI 2 2
MIRT544922 BTBD9 BTB domain containing 9 2 6
MIRT545100 TRIM66 tripartite motif containing 66 2 2
MIRT545526 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545572 TERF2 telomeric repeat binding factor 2 2 2
MIRT545622 FYTTD1 forty-two-three domain containing 1 2 2
MIRT545690 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT545806 ZNF652 zinc finger protein 652 2 2
MIRT545940 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546137 UBE3A ubiquitin protein ligase E3A 2 2
MIRT546161 TSPAN12 tetraspanin 12 2 2
MIRT546368 SYF2 SYF2 pre-mRNA splicing factor 2 2
MIRT546417 SPRED3 sprouty related EVH1 domain containing 3 2 2
MIRT546533 SERTAD2 SERTA domain containing 2 2 2
MIRT546748 RNF115 ring finger protein 115 2 2
MIRT547074 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 2
MIRT547095 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT547645 KPNA6 karyopherin subunit alpha 6 2 4
MIRT547919 HNRNPU heterogeneous nuclear ribonucleoprotein U 2 2
MIRT548843 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 4
MIRT549013 CCDC6 coiled-coil domain containing 6 2 2
MIRT550837 PFDN2 prefoldin subunit 2 2 4
MIRT550984 ZNF254 zinc finger protein 254 2 2
MIRT551307 MARVELD2 MARVEL domain containing 2 2 2
MIRT551625 ZNF267 zinc finger protein 267 2 2
MIRT551670 KIAA1143 KIAA1143 2 4
MIRT552144 MRPL34 mitochondrial ribosomal protein L34 2 2
MIRT552497 ZNF136 zinc finger protein 136 2 2
MIRT554313 SIAH2 siah E3 ubiquitin protein ligase 2 2 4
MIRT554553 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 2
MIRT555241 PRICKLE2 prickle planar cell polarity protein 2 2 2
MIRT555925 OCLN occludin 2 4
MIRT556142 MED17 mediator complex subunit 17 2 2
MIRT556223 MB21D2 Mab-21 domain containing 2 2 2
MIRT556446 LNPEP leucyl and cystinyl aminopeptidase 2 2
MIRT557403 H3F3C H3 histone family member 3C 2 2
MIRT557611 GNB1 G protein subunit beta 1 2 2
MIRT558178 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT558232 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 2
MIRT559253 BBX BBX, HMG-box containing 2 4
MIRT560679 SRFBP1 serum response factor binding protein 1 2 2
MIRT560742 RPS17 ribosomal protein S17 2 2
MIRT561295 ZBTB43 zinc finger and BTB domain containing 43 2 2
MIRT562655 ARID1A AT-rich interaction domain 1A 2 2
MIRT563072 PVR poliovirus receptor 2 2
MIRT564119 PSME3 proteasome activator subunit 3 2 2
MIRT564527 PDXP pyridoxal phosphatase 2 2
MIRT564578 ZXDA zinc finger, X-linked, duplicated A 2 2
MIRT565947 RREB1 ras responsive element binding protein 1 2 2
MIRT565982 RNF44 ring finger protein 44 2 2
MIRT566201 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT566369 POGK pogo transposable element derived with KRAB domain 2 2
MIRT566877 LRP12 LDL receptor related protein 12 2 2
MIRT567660 EXOC8 exocyst complex component 8 2 2
MIRT567954 CREBZF CREB/ATF bZIP transcription factor 2 2
MIRT568478 ARL6IP1 ADP ribosylation factor like GTPase 6 interacting protein 1 2 2
MIRT568586 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT571779 PPP3R1 protein phosphatase 3 regulatory subunit B, alpha 2 2
MIRT572029 H2AFZ H2A histone family member Z 2 2
MIRT574241 HS6ST1 heparan sulfate 6-O-sulfotransferase 1 2 2
MIRT574522 PRC1 protein regulator of cytokinesis 1 2 2
MIRT612371 TMOD2 tropomodulin 2 2 2
MIRT614816 RAPGEF1 Rap guanine nucleotide exchange factor 1 2 2
MIRT618596 TMEM156 transmembrane protein 156 2 2
MIRT618812 HLA-DRB5 major histocompatibility complex, class II, DR beta 5 2 2
MIRT622292 SH3PXD2A SH3 and PX domains 2A 2 2
MIRT640606 PPARA peroxisome proliferator activated receptor alpha 2 2
MIRT641945 SCOC short coiled-coil protein 2 2
MIRT642126 DYRK1A dual specificity tyrosine phosphorylation regulated kinase 1A 2 4
MIRT646417 HLA-DRB1 major histocompatibility complex, class II, DR beta 1 2 2
MIRT647170 TMLHE trimethyllysine hydroxylase, epsilon 2 2
MIRT647928 RNF152 ring finger protein 152 2 2
MIRT650137 ABCB7 ATP binding cassette subfamily B member 7 2 2
MIRT652209 TRIM33 tripartite motif containing 33 2 2
MIRT652392 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT656631 LRRC15 leucine rich repeat containing 15 2 2
MIRT660225 BMPR1A bone morphogenetic protein receptor type 1A 2 2
MIRT678309 JAK2 Janus kinase 2 2 6
MIRT689318 C5AR2 complement component 5a receptor 2 2 2
MIRT691657 SLC43A3 solute carrier family 43 member 3 2 2
MIRT698794 STK38 serine/threonine kinase 38 2 2
MIRT700994 PDE3A phosphodiesterase 3A 2 2
MIRT702227 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT704054 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT711132 CYYR1 cysteine and tyrosine rich 1 2 2
MIRT711429 PROSER2 proline and serine rich 2 2 2
MIRT712667 PCTP phosphatidylcholine transfer protein 2 2
MIRT713286 LRP1B LDL receptor related protein 1B 2 2
MIRT714248 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT714619 LIPC lipase C, hepatic type 2 2
MIRT716922 GEM GTP binding protein overexpressed in skeletal muscle 2 2
MIRT719931 ART4 ADP-ribosyltransferase 4 (Dombrock blood group) 2 2
MIRT720311 CSRNP3 cysteine and serine rich nuclear protein 3 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-5692a Trastuzumab sensitive High Breast Cancer cell line (SKBR3)

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