miRTarBase - #MIRT221376


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pre-miRNA Information
pre-miRNA hsa-mir-3529   
Genomic Coordinates chr15: 88611847 - 88611924
Description Homo sapiens miR-3529 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3529-3p
Sequence 46| AACAACAAAAUCACUAGUCUUCCA |69
Evidence Not_experimental
Experiments
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1196555927 1 dbSNP
rs1215541761 2 dbSNP
rs761252497 3 dbSNP
rs1263337637 4 dbSNP
rs868026301 6 dbSNP
rs762762175 9 dbSNP
rs751269230 14 dbSNP
rs1257397051 16 dbSNP
Putative Targets

Gene Information
Gene Symbol DNAJB6   
Synonyms DJ4, DnaJ, HHDJ1, HSJ-2, HSJ2, LGMD1D, LGMD1E, MRJ, MSJ-1
Description DnaJ heat shock protein family (Hsp40) member B6
Transcript NM_058246   
Other Transcripts NM_005494   
Expression
Putative miRNA Targets on DNAJB6
3'UTR of DNAJB6
(miRNA target sites are highlighted)		 
>DNAJB6|NM_058246|3'UTR
   1 ACCGGACTTGAGGCACGCGGTGCACCCCCAGACGCTGGCGCTCCACCGTGCTCGGCATGCGGTCGTGCACACGCGCTAGG
  81 TAGCAGCGTCGGTCAGGACTGTCTCGAGGCCACACTCGCTCGGCAGGATTATGCGATCACGGATCAGTCAGAGCAGGGTC
 161 AGGAGACGGGGCTGACGGCACGGGTGGCGGGGACAGACGTTTGGGACTTGGCCGCGACTCTCTGCTTCTCTCCAGCTCTC
 241 AATCTGCTGCATTTTCCTCTAGTGCTTCCGGATCCTCTTCATTCTTTTCGGCTACTCAACCACTCCGCATGCTGCTGGAA
 321 TATTTCTGGCTTTAGAAGTACAGGAGGGCGCAGATGGCTAACTGAGTAACATTCATGAAATGAGGCTTTCTGTGGCGGCG
 401 TAGTGTTTGGAATTAGAAGGTAATTCAGTAGAGTGTAACTTAGAGAATATTGCAAGTGACACATTGAATCCTGCCCGTCA
 481 GGGCACCTTTTCCTCAGAGCAATCCGGCCACACGAATAGAAGGCTGTCGTGAATCACATCAGATGTAAAATCATTCCTTC
 561 TGTTTACTCTTTTAATTTTCATCCTTTGCAGGTAGTGCAAATTCAACTTCAAATATGGTGTAGGTTTTGCTAGATTCCAT
 641 ATTTTTTTCTTGGATTTTTGCTAATTATTTTTAGCAAAAAATTTTTGCTCAGTGGCACTCTCCCTAGTGTCCATGGGTTA
 721 GGGCCATGCTGGGGAAAACGGGCCGGTATTTACACACGCGCAAAACACCCAGAGACGGCACAAGGAGGTTGAACTCATGT
 801 TTCAGTTCGCGAACATTGACTCCTTACGAAAGTCACTTCATTCTAACTAGATGCGCCCACTTCCGGTCATTATTTCGTTT
 881 GCATGATGTATTGCTTCTTCACGTTTTGTTTTTATTGAGCACGGAGTAGAATTCCAGGGCTGCCTTGACTTCTTCCCTGC
 961 ATGCTCCCTCCCAGTGACTTTCCTTCCCTTTCACATGAGGATCTGCCGTTCATGTTGCTTTCTCCTTTGTCCTCTTGGAC
1041 TTGAGGGCATTGTGAAAAGCTTTGCTGTGATTTAAAAATGCCAGCAATTTTAATCTAGCAGTGTTGAAGCTGGGAATTTT
1121 TTGGCGCAATCCATGTAGCAGTGACCCAGGCTTGGGAGCCAGAAACAAGTGTGACCTGGGATTTTATTTAACACAACTGT
1201 TGCCAAAGAGTTGGCTTTGTTTATTTGGTTTTGGCGGGGAGAGGAGTGGTATTTGATGCTTTCTGTGGACAATGTAACCC
1281 TAAACACATCATGTATTTTAAATGCCACCTACATAAATAAAACATAAGCATATTGAATACAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' acCUUCUG-AUCACU----AAAACAACAa 5'
            ||:|:| | ||||     |||| ||| 
Target 5' ttGAGGGCATTGTGAAAAGCTTTGCTGTg 3'
 1041 - 1069 132.00 -9.80
2 
miRNA  3' acCUUCUGAUCACUA-AAACAACaa 5'
            |:|||  ||||:| |||| ||  
Target 5' ggGGAGAGGAGTGGTATTTGATGct 3'
 1236 - 1260 126.00 -18.30
3 
miRNA  3' accUUCUGAUCACUAAAACAAcaa 5'
             |||| |  ||: ||||||   
Target 5' ccaAAGAGT--TGGCTTTGTTtat 3'
 1203 - 1224 125.00 -6.12
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
282119 4 ClinVar
385378 18 ClinVar
359457 65 ClinVar
359458 73 ClinVar
909392 73 ClinVar
359459 89 ClinVar
909393 99 ClinVar
909394 106 ClinVar
359460 119 ClinVar
910345 216 ClinVar
910346 244 ClinVar
359461 290 ClinVar
910347 300 ClinVar
359462 307 ClinVar
910348 308 ClinVar
359463 383 ClinVar
359464 490 ClinVar
911556 503 ClinVar
911557 514 ClinVar
359465 515 ClinVar
359466 529 ClinVar
359467 587 ClinVar
359468 605 ClinVar
359469 607 ClinVar
359470 611 ClinVar
908605 637 ClinVar
359471 640 ClinVar
908606 665 ClinVar
359472 700 ClinVar
359473 727 ClinVar
359474 760 ClinVar
359475 777 ClinVar
359476 782 ClinVar
359477 788 ClinVar
359478 903 ClinVar
909463 924 ClinVar
359479 935 ClinVar
909464 966 ClinVar
359480 967 ClinVar
910405 1009 ClinVar
359481 1237 ClinVar
COSN23016961 17 COSMIC
COSN31592639 18 COSMIC
COSN30543059 40 COSMIC
COSN8516114 41 COSMIC
COSN29468675 49 COSMIC
COSN31601809 49 COSMIC
COSN24311196 65 COSMIC
COSN31611334 75 COSMIC
COSN30533199 89 COSMIC
COSN7657693 141 COSMIC
COSN20621045 428 COSMIC
COSN9979658 905 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1443631898 1 dbSNP
rs140445215 4 dbSNP
rs538057079 5 dbSNP
rs748781499 6 dbSNP
rs1331022826 12 dbSNP
rs1465917108 13 dbSNP
rs1373925370 16 dbSNP
rs754496495 17 dbSNP
rs369235805 18 dbSNP
rs577875381 19 dbSNP
rs771151320 20 dbSNP
rs372172001 23 dbSNP
rs192037366 24 dbSNP
rs1291963093 26 dbSNP
rs746303138 27 dbSNP
rs1003356872 28 dbSNP
rs377063562 29 dbSNP
rs1438292311 32 dbSNP
rs369741728 34 dbSNP
rs763062645 35 dbSNP
rs768816202 37 dbSNP
rs774391788 38 dbSNP
rs542342637 40 dbSNP
rs767669570 41 dbSNP
rs369221072 44 dbSNP
rs1390163861 45 dbSNP
rs561059767 47 dbSNP
rs142165399 48 dbSNP
rs754405567 49 dbSNP
rs1446428433 52 dbSNP
rs377683714 54 dbSNP
rs1323646864 55 dbSNP
rs551156852 59 dbSNP
rs1011792317 61 dbSNP
rs965557122 62 dbSNP
rs562936080 65 dbSNP
rs1381653449 66 dbSNP
rs954402824 68 dbSNP
rs1251463854 69 dbSNP
rs116630040 73 dbSNP
rs150779247 74 dbSNP
rs1213977664 75 dbSNP
rs776254454 76 dbSNP
rs1397239496 83 dbSNP
rs1030976259 88 dbSNP
rs139193261 89 dbSNP
rs541259018 91 dbSNP
rs1388267012 93 dbSNP
rs972498518 95 dbSNP
rs879110420 96 dbSNP
rs1287879184 102 dbSNP
rs534203597 106 dbSNP
rs1361823130 116 dbSNP
rs764933589 118 dbSNP
rs886062130 119 dbSNP
rs773534306 122 dbSNP
rs549360686 123 dbSNP
rs1441955904 124 dbSNP
rs1434096902 131 dbSNP
rs1305946005 135 dbSNP
rs1372879138 140 dbSNP
rs567762107 141 dbSNP
rs1231896135 142 dbSNP
rs949220233 147 dbSNP
rs1345870908 148 dbSNP
rs753180096 159 dbSNP
rs1046335065 165 dbSNP
rs926520826 168 dbSNP
rs756598628 177 dbSNP
rs537908243 178 dbSNP
rs946600853 179 dbSNP
rs893103166 181 dbSNP
rs764284901 182 dbSNP
rs1042165524 183 dbSNP
rs1413595238 186 dbSNP
rs556372247 189 dbSNP
rs544983219 190 dbSNP
rs146779424 199 dbSNP
rs998313618 200 dbSNP
rs1188174807 202 dbSNP
rs1168790287 208 dbSNP
rs1028887540 214 dbSNP
rs1364817936 215 dbSNP
rs953620507 216 dbSNP
rs759467623 217 dbSNP
rs1015881680 218 dbSNP
rs1471452978 229 dbSNP
rs1484705078 231 dbSNP
rs140516420 233 dbSNP
rs1017166941 236 dbSNP
rs1483546962 237 dbSNP
rs1250752558 241 dbSNP
rs571981993 243 dbSNP
rs971860158 244 dbSNP
rs1278410510 245 dbSNP
rs542232099 252 dbSNP
rs1026466800 257 dbSNP
rs1392559728 260 dbSNP
rs972382657 264 dbSNP
rs866911588 270 dbSNP
rs554220388 271 dbSNP
rs982347227 278 dbSNP
rs886062131 290 dbSNP
rs939042113 300 dbSNP
rs576133569 307 dbSNP
rs1286436589 308 dbSNP
rs989362447 310 dbSNP
rs946554053 314 dbSNP
rs1044074680 318 dbSNP
rs1249697801 327 dbSNP
rs1176751078 329 dbSNP
rs1458885614 336 dbSNP
rs144227992 342 dbSNP
rs765359297 344 dbSNP
rs1053011975 347 dbSNP
rs183388200 354 dbSNP
rs139354905 358 dbSNP
rs377402170 358 dbSNP
rs1334699726 367 dbSNP
rs35743737 383 dbSNP
rs1449693151 385 dbSNP
rs1378025930 386 dbSNP
rs1325667406 393 dbSNP
rs1460263816 396 dbSNP
rs933536433 397 dbSNP
rs78084094 398 dbSNP
rs1475538088 399 dbSNP
rs1017637749 400 dbSNP
rs560780381 401 dbSNP
rs548095526 405 dbSNP
rs527946209 414 dbSNP
rs1192760676 420 dbSNP
rs562917032 423 dbSNP
rs1210087877 425 dbSNP
rs993559167 428 dbSNP
rs1168757023 447 dbSNP
rs779337072 451 dbSNP
rs960456796 453 dbSNP
rs991001300 454 dbSNP
rs373966747 455 dbSNP
rs968320956 457 dbSNP
rs981844807 461 dbSNP
rs530534417 463 dbSNP
rs146575525 471 dbSNP
rs1294617583 477 dbSNP
rs764452717 478 dbSNP
rs959163955 479 dbSNP
rs1420447686 484 dbSNP
rs187704048 490 dbSNP
rs549993404 493 dbSNP
rs1172977737 501 dbSNP
rs1476904926 502 dbSNP
rs1379188183 503 dbSNP
rs1199050762 504 dbSNP
rs757128702 506 dbSNP
rs1053063775 507 dbSNP
rs1218163075 509 dbSNP
rs201347914 511 dbSNP
rs780921412 512 dbSNP
rs538467964 514 dbSNP
rs17837760 515 dbSNP
rs1347524341 522 dbSNP
rs886062132 529 dbSNP
rs79489534 535 dbSNP
rs977815944 543 dbSNP
rs1338696503 556 dbSNP
rs747903215 558 dbSNP
rs1400656082 567 dbSNP
rs889866817 569 dbSNP
rs1333385435 572 dbSNP
rs1251655170 583 dbSNP
rs1426937135 584 dbSNP
rs886062133 587 dbSNP
rs750365399 589 dbSNP
rs1475001643 591 dbSNP
rs1195464401 595 dbSNP
rs1006139938 600 dbSNP
rs1486298352 602 dbSNP
rs924757324 603 dbSNP
rs1208554931 604 dbSNP
rs78938721 605 dbSNP
rs570569711 607 dbSNP
rs1423373491 609 dbSNP
rs886062134 611 dbSNP
rs1375070122 613 dbSNP
rs1280309084 617 dbSNP
rs1035253706 622 dbSNP
rs1354827286 631 dbSNP
rs960401256 633 dbSNP
rs1011907637 634 dbSNP
rs1334799369 635 dbSNP
rs756063127 637 dbSNP
rs554589200 639 dbSNP
rs76450641 640 dbSNP
rs1412367130 642 dbSNP
rs993217781 643 dbSNP
rs1179592560 647 dbSNP
rs1473531721 648 dbSNP
rs1369818007 650 dbSNP
rs1026403328 651 dbSNP
rs1456681068 652 dbSNP
rs1435296186 654 dbSNP
rs1199445520 664 dbSNP
rs779593683 665 dbSNP
rs906165286 668 dbSNP
rs1288072761 680 dbSNP
rs1003716688 681 dbSNP
rs1314697734 682 dbSNP
rs1380047562 682 dbSNP
rs1376315151 685 dbSNP
rs543530610 691 dbSNP
rs4716719 700 dbSNP
rs192271769 706 dbSNP
rs1348933104 707 dbSNP
rs975993463 708 dbSNP
rs1406577870 713 dbSNP
rs923187056 714 dbSNP
rs1158528532 724 dbSNP
rs7787595 727 dbSNP
rs1022253448 729 dbSNP
rs1240638382 730 dbSNP
rs560623928 740 dbSNP
rs1488382626 741 dbSNP
rs1245183106 744 dbSNP
rs911297909 746 dbSNP
rs1274411207 750 dbSNP
rs977993107 756 dbSNP
rs924612076 758 dbSNP
rs778560594 759 dbSNP
rs1059752 760 dbSNP
rs987542418 762 dbSNP
rs542944956 764 dbSNP
rs1056768850 767 dbSNP
rs1438208921 769 dbSNP
rs550265054 772 dbSNP
rs115297289 777 dbSNP
rs1297028919 778 dbSNP
rs886062135 782 dbSNP
rs1382670162 783 dbSNP
rs1012329108 784 dbSNP
rs920735315 787 dbSNP
rs184330731 788 dbSNP
rs1047948107 790 dbSNP
rs550121755 795 dbSNP
rs1389283362 798 dbSNP
rs1454586013 804 dbSNP
rs1003192609 809 dbSNP
rs188002105 810 dbSNP
rs1175422318 811 dbSNP
rs1030692260 812 dbSNP
rs1298925572 815 dbSNP
rs532491697 816 dbSNP
rs894888675 828 dbSNP
rs1010781950 829 dbSNP
rs1288964386 833 dbSNP
rs953280186 839 dbSNP
rs1022138872 844 dbSNP
rs1361927021 847 dbSNP
rs1386631208 853 dbSNP
rs1432405161 855 dbSNP
rs966534358 856 dbSNP
rs1178667990 860 dbSNP
rs532429399 865 dbSNP
rs999860686 866 dbSNP
rs868775317 877 dbSNP
rs974194050 878 dbSNP
rs918667243 882 dbSNP
rs1372169442 884 dbSNP
rs1029563605 885 dbSNP
rs1237052093 888 dbSNP
rs1211937935 901 dbSNP
rs547235102 903 dbSNP
rs1056607142 904 dbSNP
rs375510987 905 dbSNP
rs192836867 923 dbSNP
rs149171640 924 dbSNP
rs886062136 935 dbSNP
rs1395000685 943 dbSNP
rs1208318571 944 dbSNP
rs973425108 948 dbSNP
rs1305149702 950 dbSNP
rs1466851469 953 dbSNP
rs1468746294 956 dbSNP
rs770410693 963 dbSNP
rs143332396 967 dbSNP
rs997305280 969 dbSNP
rs1048472600 972 dbSNP
rs1030096912 973 dbSNP
rs953429853 976 dbSNP
rs76436765 980 dbSNP
rs1461574109 994 dbSNP
rs569902814 998 dbSNP
rs1196308237 1008 dbSNP
rs986094779 1008 dbSNP
rs928224062 1009 dbSNP
rs939032251 1013 dbSNP
rs974035949 1016 dbSNP
rs552643388 1019 dbSNP
rs894771165 1027 dbSNP
rs1338239242 1039 dbSNP
rs1315379970 1041 dbSNP
rs1010667179 1044 dbSNP
rs1043465415 1048 dbSNP
rs1455243200 1050 dbSNP
rs1376538983 1065 dbSNP
rs1271364722 1066 dbSNP
rs1329745200 1075 dbSNP
rs918678645 1085 dbSNP
rs1401263603 1111 dbSNP
rs902369964 1117 dbSNP
rs1456415649 1125 dbSNP
rs148354776 1126 dbSNP
rs1166751058 1127 dbSNP
rs1445183944 1146 dbSNP
rs1394763646 1148 dbSNP
rs774716509 1150 dbSNP
rs369876849 1153 dbSNP
rs891044867 1155 dbSNP
rs1443485973 1166 dbSNP
rs948204012 1170 dbSNP
rs1292173987 1171 dbSNP
rs1208891459 1176 dbSNP
rs1353594819 1178 dbSNP
rs1266702620 1179 dbSNP
rs762188320 1181 dbSNP
rs1353599382 1186 dbSNP
rs1045361859 1194 dbSNP
rs1242741749 1199 dbSNP
rs1336750006 1222 dbSNP
rs1323098180 1228 dbSNP
rs1309850923 1231 dbSNP
rs1327149688 1233 dbSNP
rs1392902276 1234 dbSNP
rs904093037 1236 dbSNP
rs886062137 1237 dbSNP
rs1419252747 1239 dbSNP
rs1007885376 1240 dbSNP
rs1156825652 1251 dbSNP
rs1441262165 1252 dbSNP
rs558484696 1264 dbSNP
rs1052010497 1269 dbSNP
rs1269092314 1271 dbSNP
rs1017567769 1273 dbSNP
rs577013441 1274 dbSNP
rs140589399 1275 dbSNP
rs1284442869 1276 dbSNP
rs1223445625 1278 dbSNP
rs1219475927 1280 dbSNP
rs1351771073 1282 dbSNP
rs1059820 1308 dbSNP
rs1274647661 1318 dbSNP
rs1244733141 1324 dbSNP
rs997192388 1325 dbSNP
rs1284207483 1326 dbSNP
rs369519622 1328 dbSNP
rs1399449428 1330 dbSNP
rs112650801 1331 dbSNP
rs759192072 1337 dbSNP
rs964654492 1340 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions hESCs (WA-09)
Disease 10049.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in SRR359787. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Lipchina I; Elkabetz Y; Hafner M; Sheridan et al., 2011, Genes & development.

Article - Lipchina I; Elkabetz Y; Hafner M; Sheridan et al.
- Genes & development, 2011
MicroRNAs are important regulators in many cellular processes, including stem cell self-renewal. Recent studies demonstrated their function as pluripotency factors with the capacity for somatic cell reprogramming. However, their role in human embryonic stem (ES) cells (hESCs) remains poorly understood, partially due to the lack of genome-wide strategies to identify their targets. Here, we performed comprehensive microRNA profiling in hESCs and in purified neural and mesenchymal derivatives. Using a combination of AGO cross-linking and microRNA perturbation experiments, together with computational prediction, we identified the targets of the miR-302/367 cluster, the most abundant microRNAs in hESCs. Functional studies identified novel roles of miR-302/367 in maintaining pluripotency and regulating hESC differentiation. We show that in addition to its role in TGF-beta signaling, miR-302/367 promotes bone morphogenetic protein (BMP) signaling by targeting BMP inhibitors TOB2, DAZAP2, and SLAIN1. This study broadens our understanding of microRNA function in hESCs and is a valuable resource for future studies in this area.
LinkOut: [PMID: 22012620]
CLIP-seq Support 1 for dataset SRR359787
Method / RBP PAR-CLIP / AGO2
Cell line / Condition hESCs (WA-09) / 4-thiouridine, RNase T1
Location of target site ENST00000429029.2 | 3UTR | UAAAUCUCUGUAUGCACUUUGCUUUUUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22012620 / SRX103431
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
101 hsa-miR-3529-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061395 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT066530 HMGA2 high mobility group AT-hook 2 2 6
MIRT072699 SMAD3 SMAD family member 3 2 2
MIRT080963 LRRC8B leucine rich repeat containing 8 VRAC subunit B 2 2
MIRT095081 SAR1B secretion associated Ras related GTPase 1B 2 2
MIRT104782 FZD6 frizzled class receptor 6 2 2
MIRT161286 U2SURP U2 snRNP associated SURP domain containing 2 2
MIRT176138 ATP7A ATPase copper transporting alpha 2 2
MIRT221376 DNAJB6 DnaJ heat shock protein family (Hsp40) member B6 2 2
MIRT260611 SOX4 SRY-box 4 2 4
MIRT269640 MDM4 MDM4, p53 regulator 2 4
MIRT306853 FYTTD1 forty-two-three domain containing 1 2 2
MIRT315027 TFAP2A transcription factor AP-2 alpha 2 2
MIRT367278 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT444211 TMPRSS4 transmembrane protease, serine 4 2 2
MIRT455829 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT466299 TM4SF1 transmembrane 4 L six family member 1 2 2
MIRT467332 SPATA13 spermatogenesis associated 13 2 4
MIRT469830 RAB14 RAB14, member RAS oncogene family 2 2
MIRT470571 POU2F1 POU class 2 homeobox 1 2 2
MIRT472094 NOLC1 nucleolar and coiled-body phosphoprotein 1 2 2
MIRT482529 ACTB actin beta 2 4
MIRT495009 KRTAP4-9 keratin associated protein 4-9 2 4
MIRT495562 ZNF169 zinc finger protein 169 2 2
MIRT496742 PBX2P1 PBX homeobox 2 pseudogene 1 2 4
MIRT500811 THBS1 thrombospondin 1 2 2
MIRT500846 SYPL1 synaptophysin like 1 2 4
MIRT504267 C1orf147 chromosome 1 open reading frame 147 2 4
MIRT504320 TUSC1 tumor suppressor candidate 1 2 6
MIRT505533 SPATA2 spermatogenesis associated 2 2 4
MIRT505799 RSBN1 round spermatid basic protein 1 2 4
MIRT518201 CLEC4E C-type lectin domain family 4 member E 2 2
MIRT520019 YTHDF1 YTH N6-methyladenosine RNA binding protein 1 2 4
MIRT527321 NCAM2 neural cell adhesion molecule 2 2 2
MIRT529005 SIGLEC14 sialic acid binding Ig like lectin 14 2 4
MIRT530312 TNFRSF10D TNF receptor superfamily member 10d 2 2
MIRT532324 DUSP4 dual specificity phosphatase 4 2 2
MIRT532497 HOXA13 homeobox A13 2 2
MIRT533203 WASF3 WAS protein family member 3 2 4
MIRT533376 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 4
MIRT534107 SOWAHC sosondowah ankyrin repeat domain family member C 2 2
MIRT537381 FGF2 fibroblast growth factor 2 2 2
MIRT537487 FAM169A family with sequence similarity 169 member A 2 2
MIRT539210 ANTXR2 anthrax toxin receptor 2 2 4
MIRT540299 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 2
MIRT544610 FCF1 FCF1, rRNA-processing protein 2 2
MIRT547382 MPRIP myosin phosphatase Rho interacting protein 2 2
MIRT551195 GAB2 GRB2 associated binding protein 2 2 2
MIRT554193 SLC35D1 solute carrier family 35 member D1 2 2
MIRT554998 RAB39B RAB39B, member RAS oncogene family 2 2
MIRT557252 CRAMP1L cramped chromatin regulator homolog 1 2 2
MIRT558440 DDIT4 DNA damage inducible transcript 4 2 3
MIRT558687 CMIP c-Maf inducing protein 2 2
MIRT562111 ITGB1 integrin subunit beta 1 2 2
MIRT562312 GATAD2A GATA zinc finger domain containing 2A 2 2
MIRT564781 ZDHHC7 zinc finger DHHC-type containing 7 2 2
MIRT565536 SON SON DNA binding protein 2 2
MIRT567294 HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 2 2
MIRT572337 SOX5 SRY-box 5 2 2
MIRT572389 MTX3 metaxin 3 2 2
MIRT575082 Ddit4 DNA-damage-inducible transcript 4 2 3
MIRT576838 Tgfbr3 transforming growth factor, beta receptor III 2 2
MIRT607441 SEMA6D semaphorin 6D 2 4
MIRT609555 TCEAL4 transcription elongation factor A like 4 2 2
MIRT612890 HOOK3 hook microtubule tethering protein 3 2 2
MIRT613611 TP53 tumor protein p53 2 2
MIRT614708 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT616823 HERC5 HECT and RLD domain containing E3 ubiquitin protein ligase 5 2 2
MIRT620652 CXCL5 C-X-C motif chemokine ligand 5 2 2
MIRT626770 CDC14B cell division cycle 14B 2 2
MIRT633598 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT634853 PTP4A2 protein tyrosine phosphatase type IVA, member 2 2 2
MIRT638138 TTC26 tetratricopeptide repeat domain 26 2 2
MIRT639574 GORASP1 golgi reassembly stacking protein 1 2 2
MIRT643710 ZNF736 zinc finger protein 736 2 2
MIRT644969 STEAP4 STEAP4 metalloreductase 2 2
MIRT645427 NINJ1 ninjurin 1 2 2
MIRT645939 HIPK1 homeodomain interacting protein kinase 1 2 2
MIRT646142 INTS7 integrator complex subunit 7 2 2
MIRT658015 GABRA4 gamma-aminobutyric acid type A receptor alpha4 subunit 2 2
MIRT658995 DIP2C disco interacting protein 2 homolog C 2 2
MIRT675003 SLC22A17 solute carrier family 22 member 17 2 2
MIRT675553 SIK1 salt inducible kinase 1 2 2
MIRT675621 CSE1L chromosome segregation 1 like 2 2
MIRT675952 IDE insulin degrading enzyme 2 2
MIRT692250 POLR3F RNA polymerase III subunit F 2 2
MIRT698738 STX12 syntaxin 12 2 2
MIRT699001 SPAG9 sperm associated antigen 9 2 2
MIRT703275 GNG12 G protein subunit gamma 12 2 2
MIRT706268 MKLN1 muskelin 1 2 2
MIRT707633 TARDBP TAR DNA binding protein 2 2
MIRT709622 KBTBD6 kelch repeat and BTB domain containing 6 2 2
MIRT712931 RPF2 ribosome production factor 2 homolog 2 2
MIRT713807 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT714036 SYDE2 synapse defective Rho GTPase homolog 2 2 2
MIRT714388 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT714404 FBXO31 F-box protein 31 2 2
MIRT714599 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT714663 TPCN2 two pore segment channel 2 2 2
MIRT714882 GOLPH3 golgi phosphoprotein 3 2 2
MIRT725043 NDUFAF7 NADH:ubiquinone oxidoreductase complex assembly factor 7 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3529-3p Erlotinib 176870 NSC718781 approved sensitive High Head And Neck Squamous Cell Carcinoma cell line (HN6)
hsa-miR-3529-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)

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