pre-miRNA Information
pre-miRNA hsa-mir-4524a   
Genomic Coordinates chr17: 69099564 - 69099632
Description Homo sapiens miR-4524a stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4524a-5p
Sequence 6| AUAGCAGCAUGAACCUGUCUCA |27
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1322445998 8 dbSNP
rs1350790266 13 dbSNP
rs1263495678 21 dbSNP
Putative Targets

Gene Information
Gene Symbol ZNF449   
Synonyms ZSCAN19
Description zinc finger protein 449
Transcript NM_152695   
Expression
Putative miRNA Targets on ZNF449
3'UTR of ZNF449
(miRNA target sites are highlighted)
>ZNF449|NM_152695|3'UTR
   1 GAATTGCTAAGGGAAACAGGTCTTACACAAATTGACACTAACTCAAAAAAAATCTTAACCTGCAGCAGGCTGTTTGTCTT
  81 GGAAGCTTTTGTTTGAGCTTATAAGAACATAGACAGCTTTTTTTTTTACTAGTTTTAAAACCCATCTTCCAAGGTATATG
 161 AATTCTAGAGTATTTATCTACTCCTGTGATTTTCTTAGATTTGATTTCTTCTGTCTGCACAACTCTTCTTTTTTTAATTA
 241 CAATGAAAAATTTTGTGTTCCAAGGCAACTGTATCATAGGTGTAAACATAAAGCATATAAATTATGACAATCCTTTTAGA
 321 GGTAGGGTCAATATAGTGGATAAACCTGTCTATCAGACGTATTGATTATAGCAGTACTATAGTTATTCTGCTGTCATTAT
 401 TAAAGATGATTATATTCATTCAAAGCTTTAGATGTGTCCCATGTGGCAAGAAAGGAGACAGTGAATTTTGTCAAACAATA
 481 AAAATGTGTCAGGAACACAAGGATGAAGGGGATGTCATTTGCCTGGTAAGAACTGGGTTATTTCCACTGAAATTTGTTAT
 561 GTTTAAGGAAATTAAGATTTTAAGCTTGAAATTATACAAGCAGAATCTAATTTAATTTTGATTGACTGAAGAACCAGGGT
 641 CTTTTGCTCTCCTTTGGTATTTCACTCTCCTTTGGTATTCAATCATGTGTCTTTTAGTGCTTTTTAAAATTTTACCCATT
 721 CTTTAATTCAGCATCTCCCTATGTATGTGTCATAGAATACTTAGTTCTGCTAGATATTCTGCAAATATATTTGGGAATTA
 801 CTTCCTGCTGTTTCGCCTTCTTAGGTTCATAGTACACATCAGCATATGAGAATCTCTGAGAGGTCCTCTAGAAAGGAGAG
 881 AAAAAGCACCTCTTTTGGCTCAATGTTTTCCAAACTTATTTGACCCCAAAACCTTTTTCATATACCCAATAATAAGCTAC
 961 AGAACTAATATTCTGCAAATGTCTCTTGGAACACACTGCCTTAAACAGATATTTCTATAGCTGTCAGTATAGTTATGTTG
1041 CTCCCAAGCCTAGTTATCTCCAGTTGTTTTAAGGGTGTTATGAAAAATTCTTAAAATATATATGAATTTGTGTAACACAC
1121 ACAGAGACACACACACATACTACTTTAAGGGGGTGAGGATCATTAATTCAGATAATTTTTAAGTTTCCTAGTGATTCTCA
1201 ATCTCTTTGAATTTTACTTACATTTACACACACACGCACACACATATGTATATACACATATCATTTTAAGAAGCTGAGGA
1281 TCACTAATTCAGATAATGTATAAGTTTCCCAGTGATTCTCAACCTCTTTGAATTTTACTTATAATTACATACACACACAC
1361 ACTGCTACTTATATAAATGTTCTCATGTAATCATGGTAACAGCTCAAATTCCCAAAGCAAGGGAAGACTTCTCATTGTCA
1441 GTTAAACCTGTTAAAACATGAAAATATTCATTGAGCCTAGTTCCTTGTTATAAAATACAAGAAATAAGACATTCAGGCAT
1521 TTTCCCTTTATGAAGATGTTCAGTCATCCTTTCCTTGAACTACAATTAGGAAAAGTATATGTCTTTATTCCATTGAAGTT
1601 CTCGAGAGTGATATAAATACTTTGGGGGGTATCTACTATGTGCCTAACTAGTCCTGTTCTAGGCTTAGTGGAAGCTAGTA
1681 AAGAAATATAATTCATGGATCAGGCTCATAAAGATTTTATAATATTTTTAGTTAAACAAGAGTTGGGAAACAGGTGGAGA
1761 ATAATGCAAGAGAGTTTGTAATTAAGTGCCAATTATACCAATTGCTAGACCCAGGATGTATCTTTAATTCTTGTCATCCA
1841 GGTCAACATATGATGCTGCTATAAGTCTGGGGCTCAAATTGATATCCCAGTAGCAATAAACATATAATATAGGAGGAGTC
1921 TGAATGTAGAGATGAAAAATACAGAATGTAATGGCTTCTCTTTTCTCTCTTGTGGAATTGCATTCAAACCAGAACAGTGC
2001 CTTAGAATGGATGTGCCCAACTGCTCTGTATTTATGCAATATTTGAATAAAGCGGAAATGTATGTGCTCTTCCTGCTTCA
2081 CTTGCACTAATTAATTATTTGAACAACTTAGAGCTTCTTCCCTGAACAGTGGCAACAAGCATGGCAATTGACTCTGTCCT
2161 CATCCCAAGTTGGAATCGCTTTTCTCTCTGCAACCATGGCACTGTGATTATGCATCATTTTTAGCATTTAATACAGTCCA
2241 TTTTTGGCTAGTAGGGTTAGTTGCAATCATAATATGAGTTGCATCCTCCCTCTCATTTATATCAAATATACTTGACTAGA
2321 TTTTTACAAGTTAGAGA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' acucuGUCCA-------AGUACGACGAUa 5'
               |||||       | ||||||||| 
Target 5' tcatcCAGGTCAACATATGATGCTGCTAt 3'
1834 - 1862 157.00 -17.61
2
miRNA  3' acUC-UGUCCAAGUACGACGAua 5'
            || |:||  |:|||:||||  
Target 5' tcAGTATAG--TTATGTTGCTcc 3'
1024 - 1044 128.00 -11.40
3
miRNA  3' acUCUGUCCAAGUACGACGAUa 5'
            |||    || :| |||||| 
Target 5' atAGAATACTTAGTTCTGCTAg 3'
752 - 773 124.00 -7.24
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1380391071 5 dbSNP
rs971234530 13 dbSNP
rs978230868 21 dbSNP
rs1160589330 22 dbSNP
rs782187900 25 dbSNP
rs782424987 40 dbSNP
rs1256120221 45 dbSNP
rs782682913 45 dbSNP
rs782816978 45 dbSNP
rs923921953 58 dbSNP
rs572223533 70 dbSNP
rs1354616738 73 dbSNP
rs1288282691 81 dbSNP
rs1242651828 90 dbSNP
rs936715704 110 dbSNP
rs1311989852 115 dbSNP
rs1357134363 118 dbSNP
rs1396527684 118 dbSNP
rs1296052609 145 dbSNP
rs1399036674 155 dbSNP
rs1360720862 158 dbSNP
rs1290234969 159 dbSNP
rs1455977899 163 dbSNP
rs61227378 166 dbSNP
rs911480093 179 dbSNP
rs1476435629 196 dbSNP
rs1421955769 205 dbSNP
rs1193337318 226 dbSNP
rs1488759614 233 dbSNP
rs942831632 238 dbSNP
rs1041213474 257 dbSNP
rs901562945 266 dbSNP
rs1208271495 281 dbSNP
rs782621456 283 dbSNP
rs1266036701 289 dbSNP
rs1245443902 296 dbSNP
rs1336793953 304 dbSNP
rs781862331 305 dbSNP
rs58073587 311 dbSNP
rs1340873365 316 dbSNP
rs782200786 332 dbSNP
rs181623525 345 dbSNP
rs1389396684 355 dbSNP
rs1293548104 359 dbSNP
rs1005898493 360 dbSNP
rs1398691718 394 dbSNP
rs1170558075 403 dbSNP
rs1478384302 419 dbSNP
rs186249743 424 dbSNP
rs34493055 438 dbSNP
rs782557876 502 dbSNP
rs895083400 503 dbSNP
rs1268172646 531 dbSNP
rs1215590534 536 dbSNP
rs1456473778 538 dbSNP
rs1012060613 544 dbSNP
rs1256133638 546 dbSNP
rs782314908 555 dbSNP
rs1197921102 558 dbSNP
rs1318417087 583 dbSNP
rs1271650229 600 dbSNP
rs1025217662 610 dbSNP
rs970613091 613 dbSNP
rs1330102012 616 dbSNP
rs1301401386 635 dbSNP
rs1442521523 639 dbSNP
rs1373993515 641 dbSNP
rs1331333087 642 dbSNP
rs1466537082 646 dbSNP
rs1399094015 656 dbSNP
rs978580950 667 dbSNP
rs1171134237 668 dbSNP
rs1031117293 683 dbSNP
rs1378468442 685 dbSNP
rs1195709399 686 dbSNP
rs781863320 727 dbSNP
rs145237468 732 dbSNP
rs989441467 739 dbSNP
rs1237635216 742 dbSNP
rs1177941800 746 dbSNP
rs1438268526 754 dbSNP
rs782297453 758 dbSNP
rs942967211 778 dbSNP
rs1274888067 785 dbSNP
rs1198477680 788 dbSNP
rs868916621 815 dbSNP
rs1280663691 816 dbSNP
rs1236030566 821 dbSNP
rs782257926 829 dbSNP
rs1307817870 838 dbSNP
rs1448191677 861 dbSNP
rs1338008501 881 dbSNP
rs782405726 901 dbSNP
rs782001850 906 dbSNP
rs1395859553 915 dbSNP
rs1403340677 917 dbSNP
rs1175836455 934 dbSNP
rs1418023488 944 dbSNP
rs1379782276 955 dbSNP
rs1159278639 979 dbSNP
rs557867152 987 dbSNP
rs1470491380 992 dbSNP
rs1047901538 1006 dbSNP
rs1185308797 1010 dbSNP
rs1441693179 1030 dbSNP
rs886192532 1033 dbSNP
rs1212593170 1037 dbSNP
rs1350984342 1038 dbSNP
rs1284724711 1044 dbSNP
rs1223890796 1064 dbSNP
rs1352185468 1071 dbSNP
rs1283002889 1074 dbSNP
rs1244694845 1081 dbSNP
rs1341450438 1088 dbSNP
rs60061278 1089 dbSNP
rs1315110365 1094 dbSNP
rs1398411665 1099 dbSNP
rs1360092172 1113 dbSNP
rs1298998697 1116 dbSNP
rs1402578269 1132 dbSNP
rs941654625 1147 dbSNP
rs868973497 1192 dbSNP
rs1411707107 1193 dbSNP
rs1161392586 1202 dbSNP
rs1472390437 1206 dbSNP
rs1418331380 1214 dbSNP
rs1037385945 1222 dbSNP
rs1487167719 1226 dbSNP
rs1262079481 1227 dbSNP
rs1216049705 1234 dbSNP
rs1448295263 1236 dbSNP
rs1209783678 1237 dbSNP
rs1287049501 1237 dbSNP
rs190614636 1244 dbSNP
rs1295535822 1255 dbSNP
rs1217232780 1260 dbSNP
rs1340276299 1266 dbSNP
rs1271055683 1290 dbSNP
rs1433154349 1300 dbSNP
rs182001456 1303 dbSNP
rs1348214504 1321 dbSNP
rs1322916304 1329 dbSNP
rs1404722679 1339 dbSNP
rs1395177459 1342 dbSNP
rs1166979956 1348 dbSNP
rs1012153621 1351 dbSNP
rs1422650987 1351 dbSNP
rs199730991 1351 dbSNP
rs782269906 1351 dbSNP
rs1186747976 1352 dbSNP
rs1476157300 1353 dbSNP
rs1046351069 1355 dbSNP
rs577851561 1359 dbSNP
rs1468516598 1382 dbSNP
rs999372030 1407 dbSNP
rs1275657040 1421 dbSNP
rs556670410 1446 dbSNP
rs1197292307 1448 dbSNP
rs781965785 1457 dbSNP
rs1274078263 1459 dbSNP
rs1216569445 1470 dbSNP
rs958132152 1474 dbSNP
rs1365702152 1478 dbSNP
rs1274451667 1484 dbSNP
rs782342333 1495 dbSNP
rs782074845 1498 dbSNP
rs1373269677 1503 dbSNP
rs1327920952 1518 dbSNP
rs781940545 1532 dbSNP
rs371713331 1539 dbSNP
rs1170822800 1549 dbSNP
rs1411333462 1552 dbSNP
rs1422671762 1564 dbSNP
rs1190250947 1569 dbSNP
rs1454382243 1584 dbSNP
rs1254332896 1594 dbSNP
rs1177324277 1600 dbSNP
rs375711693 1605 dbSNP
rs782200731 1607 dbSNP
rs1233845583 1612 dbSNP
rs1207110734 1613 dbSNP
rs1310783754 1616 dbSNP
rs1278255411 1619 dbSNP
rs1235291015 1624 dbSNP
rs977405493 1626 dbSNP
rs1350150311 1627 dbSNP
rs1307105613 1643 dbSNP
rs1444503566 1653 dbSNP
rs1372480770 1655 dbSNP
rs1298651145 1662 dbSNP
rs1444178592 1667 dbSNP
rs1357203015 1675 dbSNP
rs782320112 1689 dbSNP
rs1434884371 1691 dbSNP
rs1396382735 1694 dbSNP
rs6635040 1701 dbSNP
rs782156513 1705 dbSNP
rs374989657 1709 dbSNP
rs951591470 1711 dbSNP
rs782020476 1715 dbSNP
rs1482518997 1717 dbSNP
rs1237195907 1723 dbSNP
rs1211882845 1724 dbSNP
rs782139865 1740 dbSNP
rs1239569984 1768 dbSNP
rs1317571756 1782 dbSNP
rs1307692514 1790 dbSNP
rs1225392485 1793 dbSNP
rs1376710818 1807 dbSNP
rs1311989167 1809 dbSNP
rs1376939209 1815 dbSNP
rs1295936016 1817 dbSNP
rs782757637 1820 dbSNP
rs1452498100 1822 dbSNP
rs1363869001 1851 dbSNP
rs1161919503 1856 dbSNP
rs782794172 1867 dbSNP
rs1422522784 1871 dbSNP
rs1417621958 1872 dbSNP
rs781837804 1886 dbSNP
rs1037481103 1891 dbSNP
rs1476374158 1894 dbSNP
rs916249221 1902 dbSNP
rs781878386 1903 dbSNP
rs1216150078 1905 dbSNP
rs1046708649 1931 dbSNP
rs1262504325 1935 dbSNP
rs782120830 1952 dbSNP
rs1217885141 1956 dbSNP
rs1319809202 1973 dbSNP
rs906450424 1982 dbSNP
rs868907782 2021 dbSNP
rs1292561973 2044 dbSNP
rs1233723308 2054 dbSNP
rs369968805 2055 dbSNP
rs1275983671 2063 dbSNP
rs1046642 2064 dbSNP
rs1385067990 2087 dbSNP
rs893668363 2091 dbSNP
rs782471510 2105 dbSNP
rs1394447423 2108 dbSNP
rs782460805 2113 dbSNP
rs782567939 2116 dbSNP
rs1018352529 2121 dbSNP
rs781909025 2133 dbSNP
rs964005027 2143 dbSNP
rs1421934410 2144 dbSNP
rs1192756998 2152 dbSNP
rs1429285072 2160 dbSNP
rs1263978284 2161 dbSNP
rs1189582105 2168 dbSNP
rs1488183717 2169 dbSNP
rs1272489926 2171 dbSNP
rs782533774 2178 dbSNP
rs1214179777 2181 dbSNP
rs1336763532 2191 dbSNP
rs998200768 2212 dbSNP
rs1226302841 2225 dbSNP
rs1030303777 2232 dbSNP
rs1326621386 2240 dbSNP
rs1297223620 2258 dbSNP
rs1384590100 2277 dbSNP
rs951675699 2286 dbSNP
rs1369535157 2293 dbSNP
rs1327167004 2317 dbSNP
rs782700364 2318 dbSNP
rs1463468291 2319 dbSNP
rs1398628111 2325 dbSNP
rs1167674143 2337 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 203523.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' acucUGUCCA-AGUACGACGAUa 5'
              |||  | | ||||||||| 
Target 5' -ucaACA--UAUGAUGCUGCUAu 3'
1 - 20
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000339249.4 | 3UTR | UCAACAUAUGAUGCUGCUAUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
180 hsa-miR-4524a-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055251 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT055826 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT060573 CCND1 cyclin D1 2 2
MIRT061013 C1ORF21 chromosome 1 open reading frame 21 2 6
MIRT064694 CCND2 cyclin D2 2 4
MIRT075268 SNTB2 syntrophin beta 2 2 4
MIRT079668 NAPG NSF attachment protein gamma 2 12
MIRT081651 CCNE1 cyclin E1 2 4
MIRT082996 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT083463 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT085755 RIF1 replication timing regulatory factor 1 2 2
MIRT086022 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT087431 ZNRF3 zinc and ring finger 3 2 2
MIRT088786 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT089221 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT093696 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT095090 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT096249 CANX calnexin 2 2
MIRT100215 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT100746 VEGFA vascular endothelial growth factor A 2 12
MIRT100904 CD2AP CD2 associated protein 2 2
MIRT102647 UBN2 ubinuclein 2 2 10
MIRT103882 FOXK1 forkhead box K1 2 2
MIRT104246 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT106310 ZFHX4 zinc finger homeobox 4 2 6
MIRT107696 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT114943 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT117671 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT133799 SKI SKI proto-oncogene 2 2
MIRT140167 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT142279 DCTN5 dynactin subunit 5 2 8
MIRT143288 N4BP1 NEDD4 binding protein 1 2 2
MIRT165939 CREBRF CREB3 regulatory factor 2 2
MIRT175251 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT186381 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT191470 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT196480 TAOK1 TAO kinase 1 2 2
MIRT201470 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT204615 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT204646 MOB4 MOB family member 4, phocein 2 8
MIRT204749 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT206031 NUP50 nucleoporin 50 2 6
MIRT211196 FGF2 fibroblast growth factor 2 2 4
MIRT229353 ZNF449 zinc finger protein 449 2 2
MIRT247138 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT249461 ZNF691 zinc finger protein 691 2 4
MIRT256314 CDC42SE2 CDC42 small effector 2 2 2
MIRT258419 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT265083 CHEK1 checkpoint kinase 1 2 2
MIRT270561 SETD1B SET domain containing 1B 2 2
MIRT274749 RAB3IP RAB3A interacting protein 2 2
MIRT277515 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT289642 CBX2 chromobox 2 2 2
MIRT301001 MTMR3 myotubularin related protein 3 2 2
MIRT307149 CTDSPL CTD small phosphatase like 2 4
MIRT309021 USP53 ubiquitin specific peptidase 53 2 2
MIRT314100 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT319338 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT320619 ZNRF2 zinc and ring finger 2 2 2
MIRT324285 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT446498 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT448437 TLL1 tolloid like 1 2 2
MIRT461537 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463162 ZNF367 zinc finger protein 367 2 10
MIRT463493 ZC3H10 zinc finger CCCH-type containing 10 2 2
MIRT465154 TSC22D2 TSC22 domain family member 2 2 2
MIRT466418 TFAP2A transcription factor AP-2 alpha 2 8
MIRT468278 SFT2D2 SFT2 domain containing 2 2 2
MIRT469399 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT471941 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT473688 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT479618 CDC25A cell division cycle 25A 2 2
MIRT482098 AKT3 AKT serine/threonine kinase 3 2 4
MIRT483995 ATAD5 ATPase family, AAA domain containing 5 2 12
MIRT485205 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT498763 C3orf38 chromosome 3 open reading frame 38 2 8
MIRT498961 ORC4 origin recognition complex subunit 4 2 8
MIRT499440 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500080 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500305 ZNF622 zinc finger protein 622 2 8
MIRT500410 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500789 TLK1 tousled like kinase 1 2 6
MIRT500930 SRPR SRP receptor alpha subunit 2 6
MIRT500943 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501068 SMAD7 SMAD family member 7 2 8
MIRT501711 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT502627 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502910 CDCA4 cell division cycle associated 4 2 8
MIRT502935 CDC37L1 cell division cycle 37 like 1 2 8
MIRT504531 ZNF620 zinc finger protein 620 2 6
MIRT505106 YTHDC1 YTH domain containing 1 2 6
MIRT505337 TMEM245 transmembrane protein 245 2 6
MIRT505383 TMEM100 transmembrane protein 100 2 2
MIRT505678 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506157 PLAG1 PLAG1 zinc finger 2 8
MIRT506183 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506475 MYO5A myosin VA 2 6
MIRT506826 KIF23 kinesin family member 23 2 6
MIRT507160 GAS2L3 growth arrest specific 2 like 3 2 2
MIRT507511 DYNLL2 dynein light chain LC8-type 2 2 4
MIRT507845 CCNE2 cyclin E2 2 6
MIRT510403 ZNF507 zinc finger protein 507 2 2
MIRT518078 TRIM35 tripartite motif containing 35 2 2
MIRT518982 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT521045 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521190 SBNO1 strawberry notch homolog 1 2 6
MIRT522088 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 4
MIRT524846 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT527787 TMEM44 transmembrane protein 44 2 4
MIRT537803 EFNB2 ephrin B2 2 4
MIRT540830 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541140 PISD phosphatidylserine decarboxylase 2 2
MIRT541419 CBX4 chromobox 4 2 2
MIRT543517 PRSS21 protease, serine 21 2 2
MIRT543824 GSG1 germ cell associated 1 2 2
MIRT544959 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545179 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545335 CCDC83 coiled-coil domain containing 83 2 2
MIRT545518 RSL24D1 ribosomal L24 domain containing 1 2 2
MIRT545670 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545931 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546102 USP48 ubiquitin specific peptidase 48 2 4
MIRT546598 SALL1 spalt like transcription factor 1 2 4
MIRT546626 RTN4 reticulon 4 2 2
MIRT547651 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547987 HCFC2 host cell factor C2 2 4
MIRT548717 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548931 CDK17 cyclin dependent kinase 17 2 2
MIRT549067 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549266 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT550460 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550806 FAM229B family with sequence similarity 229 member B 2 2
MIRT552024 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552334 ZNF704 zinc finger protein 704 2 2
MIRT552732 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT553795 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554694 RNF149 ring finger protein 149 2 2
MIRT555133 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555264 PRDM4 PR/SET domain 4 2 2
MIRT556848 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557474 GPR27 G protein-coupled receptor 27 2 4
MIRT558018 EXT1 exostosin glycosyltransferase 1 2 2
MIRT558498 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558579 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558610 COX6B1 cytochrome c oxidase subunit 6B1 2 4
MIRT558650 CNKSR3 CNKSR family member 3 2 2
MIRT558986 CA8 carbonic anhydrase 8 2 2
MIRT559141 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559327 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT562021 LANCL1 LanC like 1 2 2
MIRT562869 KIAA1456 KIAA1456 2 2
MIRT563074 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563496 DLGAP3 DLG associated protein 3 2 2
MIRT563890 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564311 CCNT1 cyclin T1 2 2
MIRT564942 XKR7 XK related 7 2 2
MIRT564979 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT565423 TEF TEF, PAR bZIP transcription factor 2 2
MIRT566824 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571961 KIF5B kinesin family member 5B 2 2
MIRT575877 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT576523 Txlna taxilin alpha 2 2
MIRT614693 TRAK1 trafficking kinesin protein 1 2 2
MIRT616065 ZC3H14 zinc finger CCCH-type containing 14 2 2
MIRT618838 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT624626 ATXN2 ataxin 2 2 2
MIRT624652 ASAH2 N-acylsphingosine amidohydrolase 2 2 2
MIRT640314 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT659248 CUL3 cullin 3 2 2
MIRT680972 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682261 RS1 retinoschisin 1 2 2
MIRT682505 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693904 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT699214 SLCO3A1 solute carrier organic anion transporter family member 3A1 2 2
MIRT699373 SLC30A6 solute carrier family 30 member 6 2 2
MIRT699451 SLC16A9 solute carrier family 16 member 9 2 2
MIRT701230 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT702849 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT706163 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT718990 UTP15 UTP15, small subunit processome component 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4524a-5p Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4524a-5p Cetuximab resistant tissue (colorectal carcinoma)

Error report submission