miRTarBase - #MIRT234960


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pre-miRNA Information
pre-miRNA hsa-mir-4480   
Genomic Coordinates chr10: 12578753 - 12578823
Description Homo sapiens miR-4480 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4480
Sequence 44| AGCCAAGUGGAAGUUACUUUA |64
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 10 + 12578796 23291724, 27587585 MiREDiBase
A-to-I 12 10 + 12578807 23291724, 27587585 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs929437808 7 dbSNP
rs1454494557 9 dbSNP
rs1345041659 17 dbSNP
rs561601367 21 dbSNP
Putative Targets

Gene Information
Gene Symbol ZNF439   
Synonyms -
Description zinc finger protein 439
Transcript NM_152262   
Expression
Putative miRNA Targets on ZNF439
3'UTR of ZNF439
(miRNA target sites are highlighted)		 
>ZNF439|NM_152262|3'UTR
   1 ATATAAGATATATGGGAAACACTTTTATTCTGCCAAGTTATTTCAAACACATGAAAAAATTCACACTGGAGAGAAACCCT
  81 ATAAATGCAAGCAATGTGGTAAAGCCTTAATTGTTCCAGTTCCTTTCGATATCTAAAAGGACTCACAGTGGAGAAAAACT
 161 CTATGAGTGTAAGCAATGTGGGAAAGTCTTCAGATCTGTCAAGAACCTTTCAATTTATGAAAGGACACACACTGGAGAGA
 241 AACCCTATGAATGTAAGAAATGTGGAAAAGCGTTCCATAATTTCTCTTCTTTTCAAATACATGAAAGTTGCACAGAGGAG
 321 AGGCGCCCTAAGAATGTAAGCATTGTGGGAAAGCATTCATATCTGCCAAGATCGTTTGAATACATGCAAAACACACACTG
 401 GAGAGAAACCTATGAATGTAAGGAATGCAAACAAGCATTCAATTATTTTTCTTCCTTGCATATACATGAAAGGACTCATA
 481 CGAGAGAGAATCCGTATGAATGTAAGGATTGTGGGAAAGCATTCAGCTTGCTTAATTGCTTTCATAGACATGTAAAGACA
 561 CACCAGAAGGAAACCCTATGAATGTAAGCAATGTGGCAAAAGCTTTCACTTCTTCCAGTTCTTTTCAATATCATGAAAGG
 641 ACTCACACTGGGGAGAAACCGTATCAATGTAAGCAATGTGGGAAAGCCGTCAGATCAGCCTCAAGACTTCAAATGCATGG
 721 AAGCACTCACACTTGGCAGAAACTCTATGAATGTAAGCAGTATGGGAAAGCCTTCAGATCGGCTAGGATTCTTTGAATAC
 801 AAATAATGAATGTAAACAATTAACTGTTTATAATAACTGTATACTAACAAATGTTATTCTTTTTAAATAATTAAGAAGCT
 881 ATAATAAAATATCCATTGGTGTCATGTATTAGATCAAGCTTAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' auUUCAUUGAAGGUGAACCGa 5'
            |||  |||  |||||||| 
Target 5' ggAAG-CACTCACACTTGGCa 3'
 719 - 738 158.00 -15.30
2 
miRNA  3' auUUCAUUGAAGGUGAACCga 5'
            ||| :|||  |||| ||  
Target 5' gaAAG-GACTCACACTGGGga 3'
 635 - 654 110.00 -11.80
3 
miRNA  3' auuucaUUGAAGGUGAAccga 5'
                |:|||:|||||    
Target 5' ggcaaaAGCTTTCACTTcttc 3'
 595 - 615 107.00 -10.16
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31557645 8 COSMIC
COSN31574000 8 COSMIC
COSN30177258 45 COSMIC
COSN30458763 69 COSMIC
COSN30519975 70 COSMIC
COSN31492803 77 COSMIC
COSN30136543 85 COSMIC
COSN30513910 92 COSMIC
COSN30111295 97 COSMIC
COSN22262299 115 COSMIC
COSN28758045 117 COSMIC
COSN30624528 118 COSMIC
COSN13780028 128 COSMIC
COSN27006118 149 COSMIC
COSN30152752 162 COSMIC
COSN30447498 185 COSMIC
COSN31583641 186 COSMIC
COSN1210809 197 COSMIC
COSN30193327 220 COSMIC
COSN28681819 253 COSMIC
COSN31572976 254 COSMIC
COSN30115685 267 COSMIC
COSN5268441 277 COSMIC
COSN30120581 285 COSMIC
COSN30121540 290 COSMIC
COSN31529144 313 COSMIC
COSN31581056 390 COSMIC
COSN30501431 393 COSMIC
COSN31554685 468 COSMIC
COSN24458650 482 COSMIC
COSN17181908 526 COSMIC
COSN31606008 597 COSMIC
COSN31514311 635 COSMIC
COSN22990545 641 COSMIC
COSN31571929 667 COSMIC
COSN8552083 698 COSMIC
COSN32158767 703 COSMIC
COSN31561649 761 COSMIC
COSN30137877 763 COSMIC
COSN13780043 781 COSMIC
COSN23860911 781 COSMIC
COSN31584958 797 COSMIC
rs117322896 286 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs371779004 1 dbSNP
rs1172315999 2 dbSNP
rs1346905328 4 dbSNP
rs375448782 10 dbSNP
rs749450046 12 dbSNP
rs1256520123 19 dbSNP
rs771519430 28 dbSNP
rs1165374079 29 dbSNP
rs755177603 33 dbSNP
rs1434185091 40 dbSNP
rs201648143 45 dbSNP
rs746201580 48 dbSNP
rs1232202049 54 dbSNP
rs1310236722 61 dbSNP
rs758259415 68 dbSNP
rs1232800613 72 dbSNP
rs1219479707 74 dbSNP
rs1340198714 75 dbSNP
rs1276325121 80 dbSNP
rs529956507 82 dbSNP
rs1363405788 83 dbSNP
rs1376553378 93 dbSNP
rs1302799772 97 dbSNP
rs1465026429 98 dbSNP
rs1356609617 107 dbSNP
rs777710617 111 dbSNP
rs183368203 114 dbSNP
rs563403021 128 dbSNP
rs939908378 129 dbSNP
rs770722228 132 dbSNP
rs1475918834 133 dbSNP
rs530509784 143 dbSNP
rs1350378595 144 dbSNP
rs1037179035 145 dbSNP
rs919649956 152 dbSNP
rs368824700 153 dbSNP
rs1044014299 154 dbSNP
rs1235162456 157 dbSNP
rs1341118182 159 dbSNP
rs1030222432 164 dbSNP
rs1489937169 177 dbSNP
rs1376237052 178 dbSNP
rs570376354 183 dbSNP
rs1465435332 187 dbSNP
rs1007362413 194 dbSNP
rs1399040253 201 dbSNP
rs755987652 214 dbSNP
rs150906399 221 dbSNP
rs1368540159 228 dbSNP
rs1186303896 229 dbSNP
rs1421929117 240 dbSNP
rs1252587329 243 dbSNP
rs1439655927 245 dbSNP
rs1179547993 248 dbSNP
rs72994216 253 dbSNP
rs1473002889 254 dbSNP
rs1255973345 256 dbSNP
rs1010439299 258 dbSNP
rs78704590 261 dbSNP
rs1215754877 270 dbSNP
rs555161098 272 dbSNP
rs762466606 273 dbSNP
rs996281436 276 dbSNP
rs1319182740 282 dbSNP
rs1310665726 283 dbSNP
rs117322896 286 dbSNP
rs1375114088 290 dbSNP
rs535696022 300 dbSNP
rs1423539476 308 dbSNP
rs926860712 309 dbSNP
rs938296335 310 dbSNP
rs1388141536 313 dbSNP
rs1053954986 314 dbSNP
rs1391024491 317 dbSNP
rs138404339 320 dbSNP
rs187871947 325 dbSNP
rs1042464727 326 dbSNP
rs1159158806 330 dbSNP
rs1327398407 331 dbSNP
rs1019562543 335 dbSNP
rs757795549 337 dbSNP
rs901274420 345 dbSNP
rs961596258 346 dbSNP
rs998160093 348 dbSNP
rs1452343539 357 dbSNP
rs1050200828 367 dbSNP
rs889031946 369 dbSNP
rs539564754 372 dbSNP
rs558202710 374 dbSNP
rs74454158 375 dbSNP
rs550592362 394 dbSNP
rs573166324 405 dbSNP
rs1025997610 413 dbSNP
rs1240012609 418 dbSNP
rs116273286 428 dbSNP
rs931033418 433 dbSNP
rs1306014852 438 dbSNP
rs1234430570 443 dbSNP
rs1331288108 446 dbSNP
rs1245459740 449 dbSNP
rs1322501881 456 dbSNP
rs1384769916 461 dbSNP
rs979852677 462 dbSNP
rs926944884 478 dbSNP
rs79495694 482 dbSNP
rs574764307 494 dbSNP
rs542081237 495 dbSNP
rs1478250642 503 dbSNP
rs1249718246 516 dbSNP
rs1196993680 518 dbSNP
rs892014210 526 dbSNP
rs946293713 535 dbSNP
rs10405375 536 dbSNP
rs1487558800 541 dbSNP
rs1283128205 546 dbSNP
rs1033801884 547 dbSNP
rs546921869 550 dbSNP
rs1443797447 551 dbSNP
rs1230603749 552 dbSNP
rs959630928 560 dbSNP
rs990167177 563 dbSNP
rs1278212039 564 dbSNP
rs530706233 584 dbSNP
rs867886251 585 dbSNP
rs143003329 592 dbSNP
rs766770281 597 dbSNP
rs1415017817 603 dbSNP
rs570636623 604 dbSNP
rs1170661001 630 dbSNP
rs922649586 631 dbSNP
rs1008865206 632 dbSNP
rs564165026 643 dbSNP
rs1476897060 644 dbSNP
rs1259761177 660 dbSNP
rs1015340306 661 dbSNP
rs1442417580 668 dbSNP
rs539211773 677 dbSNP
rs1197940660 680 dbSNP
rs934106437 689 dbSNP
rs1049749753 690 dbSNP
rs1217433395 694 dbSNP
rs1402310973 697 dbSNP
rs1397051965 698 dbSNP
rs1285484817 705 dbSNP
rs1448659662 711 dbSNP
rs889809554 717 dbSNP
rs1339860922 721 dbSNP
rs943287871 730 dbSNP
rs952571805 731 dbSNP
rs1401246536 732 dbSNP
rs1170215525 734 dbSNP
rs979821638 749 dbSNP
rs927081646 751 dbSNP
rs1182582282 763 dbSNP
rs1037553331 767 dbSNP
rs1472724749 771 dbSNP
rs1236234457 772 dbSNP
rs1452420637 779 dbSNP
rs755022786 781 dbSNP
rs10403439 782 dbSNP
rs1238003660 783 dbSNP
rs912909181 788 dbSNP
rs1315745863 808 dbSNP
rs993256266 808 dbSNP
rs1291382326 809 dbSNP
rs1228406110 818 dbSNP
rs546182901 819 dbSNP
rs1355509160 825 dbSNP
rs1026138859 828 dbSNP
rs946292512 830 dbSNP
rs796711276 838 dbSNP
rs1377323818 845 dbSNP
rs1330504049 850 dbSNP
rs1444826161 854 dbSNP
rs904688310 868 dbSNP
rs1165487128 870 dbSNP
rs1404869920 871 dbSNP
rs1345849054 874 dbSNP
rs1160949467 883 dbSNP
rs1412199133 883 dbSNP
rs932172258 886 dbSNP
rs1380068241 900 dbSNP
rs1050590966 902 dbSNP
rs751467787 905 dbSNP
rs369374680 906 dbSNP
rs906278201 917 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' auuucauugaagguGAACCGa 5'
                        |||||| 
Target 5' ---------uuggcCUUGGCu 3'
 		1 - 12
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL-BAC
Disease MIMAT0019014
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1020023. RNA binding protein: AGO2. Condition:EBV B95-8-infected ...

- Skalsky RL; Corcoran DL; Gottwein E; Frank et al., 2012, PLoS pathogens.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' auuucauugaagguGAACCGa 5'
                        |||||| 
Target 5' ---------uuggcCUUGGCu 3'
 		1 - 12
Article - Skalsky RL; Corcoran DL; Gottwein E; Frank et al.
- PLoS pathogens, 2012
Epstein-Barr virus (EBV) is a ubiquitous human herpesvirus linked to a number of B cell cancers and lymphoproliferative disorders. During latent infection, EBV expresses 25 viral pre-microRNAs (miRNAs) and induces the expression of specific host miRNAs, such as miR-155 and miR-21, which potentially play a role in viral oncogenesis. To date, only a limited number of EBV miRNA targets have been identified; thus, the role of EBV miRNAs in viral pathogenesis and/or lymphomagenesis is not well defined. Here, we used photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) combined with deep sequencing and computational analysis to comprehensively examine the viral and cellular miRNA targetome in EBV strain B95-8-infected lymphoblastoid cell lines (LCLs). We identified 7,827 miRNA-interaction sites in 3,492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs. 24 PAR-CLIP-identified miRNA:3'UTR interactions were confirmed by reporter assays. Our results reveal that EBV miRNAs predominantly target cellular transcripts during latent infection, thereby manipulating the host environment. Furthermore, targets of EBV miRNAs are involved in multiple cellular processes that are directly relevant to viral infection, including innate immunity, cell survival, and cell proliferation. Finally, we present evidence that myc-regulated host miRNAs from the miR-17/92 cluster can regulate latent viral gene expression. This comprehensive survey of the miRNA targetome in EBV-infected B cells represents a key step towards defining the functions of EBV-encoded miRNAs, and potentially, identifying novel therapeutic targets for EBV-associated malignancies.
LinkOut: [PMID: 22291592]
CLIP-seq Support 1 for dataset GSM1020023
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BAC / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000304030.2 | 3UTR | UUGGCCUUGGCUGGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000304030.2 | 3UTR | UUGGCCUUGGCUGGGU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
117 hsa-miR-4480 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056040 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT091259 FXR1 FMR1 autosomal homolog 1 2 4
MIRT117347 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT234960 ZNF439 zinc finger protein 439 2 4
MIRT441356 ZNF75A zinc finger protein 75a 2 2
MIRT441426 STXBP2 syntaxin binding protein 2 2 2
MIRT441455 ZNF488 zinc finger protein 488 2 4
MIRT441524 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT441576 EXOC5 exocyst complex component 5 2 2
MIRT441597 ABCB5 ATP binding cassette subfamily B member 5 2 6
MIRT441610 ATP13A4 ATPase 13A4 2 2
MIRT441698 CIT citron rho-interacting serine/threonine kinase 2 2
MIRT441714 FGF9 fibroblast growth factor 9 2 2
MIRT441784 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT441795 EXOSC2 exosome component 2 2 2
MIRT441868 RNASEL ribonuclease L 2 2
MIRT441900 SLC9A8 solute carrier family 9 member A8 2 6
MIRT441919 FAM217B family with sequence similarity 217 member B 2 2
MIRT441928 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT441938 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT442157 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT442172 AZF1 azoospermia factor 1 2 2
MIRT442208 IRS1 insulin receptor substrate 1 2 2
MIRT442237 DDX19A DEAD-box helicase 19A 2 2
MIRT442366 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442572 SDC1 syndecan 1 2 2
MIRT442604 ZNF391 zinc finger protein 391 2 2
MIRT442609 MRC1 mannose receptor C-type 1 2 2
MIRT442647 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT442658 OIP5 Opa interacting protein 5 2 6
MIRT442686 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT442773 JAG1 jagged 1 2 2
MIRT442785 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT442895 PLCB3 phospholipase C beta 3 2 2
MIRT442941 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT442959 SGCD sarcoglycan delta 2 2
MIRT442998 EDAR ectodysplasin A receptor 2 2
MIRT443017 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443064 CASP5 caspase 5 2 2
MIRT443069 ABLIM1 actin binding LIM protein 1 2 2
MIRT443208 VPS36 vacuolar protein sorting 36 homolog 2 2
MIRT443237 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443253 A1CF APOBEC1 complementation factor 2 2
MIRT443329 JUN Jun proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT443333 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443349 STX7 syntaxin 7 2 2
MIRT443452 CLIC5 chloride intracellular channel 5 2 2
MIRT443547 GPR35 G protein-coupled receptor 35 2 2
MIRT443616 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT443626 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT443730 ALPK3 alpha kinase 3 2 2
MIRT443786 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443852 RGS6 regulator of G protein signaling 6 2 2
MIRT445483 KLF5 Kruppel like factor 5 2 2
MIRT471105 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472329 NETO2 neuropilin and tolloid like 2 2 4
MIRT472391 NDRG3 NDRG family member 3 2 2
MIRT473522 MAX MYC associated factor X 2 2
MIRT473874 MAFK MAF bZIP transcription factor K 2 6
MIRT476021 GTF2A1 general transcription factor IIA subunit 1 2 2
MIRT478320 DDN dendrin 2 2
MIRT492049 TNFSF9 TNF superfamily member 9 2 2
MIRT494851 ANKRD24 ankyrin repeat domain 24 2 2
MIRT494991 TSSC1 EARP complex and GARP complex interacting protein 1 2 2
MIRT495034 RASSF2 Ras association domain family member 2 2 2
MIRT495111 NOL10 nucleolar protein 10 2 2
MIRT495113 TRADD TNFRSF1A associated via death domain 2 2
MIRT495131 METTL24 methyltransferase like 24 2 2
MIRT495147 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT495297 NUP54 nucleoporin 54 2 2
MIRT495341 RTN2 reticulon 2 2 2
MIRT495347 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT496682 DUSP18 dual specificity phosphatase 18 2 2
MIRT496743 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT496841 KCNIP2 potassium voltage-gated channel interacting protein 2 2 2
MIRT496852 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496889 FOXP1 forkhead box P1 2 2
MIRT496922 CLMN calmin 2 2
MIRT496990 TMEM231 transmembrane protein 231 2 2
MIRT497002 SNAP25 synaptosome associated protein 25 2 2
MIRT497058 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT500529 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 6
MIRT506048 PPP6C protein phosphatase 6 catalytic subunit 2 4
MIRT512163 CD164 CD164 molecule 2 6
MIRT527051 RDH13 retinol dehydrogenase 13 2 2
MIRT532282 TNFSF14 TNF superfamily member 14 2 2
MIRT534083 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT534605 RNASEH1 ribonuclease H1 2 4
MIRT539509 ACSS3 acyl-CoA synthetase short chain family member 3 2 2
MIRT543069 ARID4B AT-rich interaction domain 4B 2 2
MIRT544233 CCBL2 kynurenine aminotransferase 3 2 2
MIRT544686 ZNF224 zinc finger protein 224 2 4
MIRT546269 TMEM30A transmembrane protein 30A 2 4
MIRT559069 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT562768 RMI2 RecQ mediated genome instability 2 2 2
MIRT563974 HCFC1 host cell factor C1 2 2
MIRT564086 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT564525 PDXP pyridoxal phosphatase 2 2
MIRT564613 ZNF703 zinc finger protein 703 2 2
MIRT566252 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT614420 ZNF440 zinc finger protein 440 2 2
MIRT618789 MTHFR methylenetetrahydrofolate reductase 2 2
MIRT619160 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT641778 ZDHHC7 zinc finger DHHC-type containing 7 2 4
MIRT653680 SLC25A36 solute carrier family 25 member 36 2 2
MIRT657861 GJD2 gap junction protein delta 2 2 2
MIRT660879 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT668781 DAAM1 dishevelled associated activator of morphogenesis 1 2 4
MIRT688559 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT695393 WDR41 WD repeat domain 41 2 2
MIRT698680 TCEA1 transcription elongation factor A1 2 2
MIRT700974 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT705055 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705864 AFF1 AF4/FMR2 family member 1 2 2
MIRT710586 CDCA4 cell division cycle associated 4 2 2
MIRT713904 IGF2R insulin like growth factor 2 receptor 2 2
MIRT717133 SKI SKI proto-oncogene 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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