miRTarBase - #MIRT242227


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pre-miRNA Information
pre-miRNA hsa-mir-5691   
Genomic Coordinates chr11: 9090312 - 9090379
Description Homo sapiens miR-5691 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-5691
Sequence 9| UUGCUCUGAGCUCCGAGAAAGC |30
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1042238449 3 dbSNP
rs554804494 11 dbSNP
rs1172229307 13 dbSNP
rs112511786 14 dbSNP
Putative Targets

Gene Information
Gene Symbol TTC9   
Synonyms TTC9A
Description tetratricopeptide repeat domain 9
Transcript NM_015351   
Expression
Putative miRNA Targets on TTC9
3'UTR of TTC9
(miRNA target sites are highlighted)		 
>TTC9|NM_015351|3'UTR
   1 CCAGGAAGCAGCTCCAGAGCTGCGCCCACGCCTGACCGGGGACTTCCAGGCATCCCCTGGCAGAGAGCCCCGTCCTGGAT
  81 TCTGTCCCTTTCTCCCCACTTCTTCTGGCTCCTCATTTTTCCTCCTGTTGCACCCCAGCTCTTTGTCTCCTCCCAGTACG
 161 AAAAGGAGAGATGCAAATTTGGAATCTGGTAGGTCGCCCAGACAATGGAGACATCCTCTCCTCTAGCAGGTCAGCGACTG
 241 AGAGGGGCCTGACTTCTGCTGGGACAGCTGGAGAGGAGTCTCATGGGCTGGGATGCTGTTGTGGCTTTGACTTTGGCCAG
 321 TGCTTCTGACAGAGGCGGAGCCTGGCAAGTGTACCATCCCACAGGCAGCAGGCACACAGCCCATGGGCTGGATCCTTCCA
 401 CACTTTCCTGACAGACCAGAACCAGAGCATCTCGAGGCAACTGTTAGAAATCCAGGGACGAGACAAACAGAGAAGCGCTG
 481 GTGAAGCCAACATAGAGACTGTCAATGTGTACACTGGAGTTCCCACCCCCACCCCCCACCCGTCACTTAGCCCCTGCCTC
 561 CTTCCCCCACTCGTTGTCTTGGCTTGTGCTTTCTCCTCTCCCCATCGGGGATCCGAGACTCTGCCAGGATTCACATGCCA
 641 CTGAAGCCCACTCAGTGCCCTCTGGTGACCACACATACCATTCCCCCGGACTCCCACCCAGCAGGCAGCTGTGACCGCAG
 721 AAGGGCAGGATGAAGTGGGCCAAGGTTTGGGACAGGTTGACTGTGTAGGTGACAGGGAGGGAAAGATGATGGCCAGGGGA
 801 AAGAGCATCGTATAGGCTAGGGGATTGAACTGTGGACTGATTCAGTGTAAATAAAAACAAATTAACAGGTAGTAGTTCCT
 881 GTCAGTTCTGTTGGAAGCAGCCCACTCCCTCACTTTTACTCCTTCCTCCAACCCTCAATCAGAGCTACTTACAGCCAGGC
 961 AGGATGGGGCTTTCCCCAAAGCAATTGGCCGTTTGTCCAGTGGCAGACAATGGTGGCTACAGCCTTTGTGCTTTTAAGAG
1041 TGGGCTGGGATTGTGGAGACTGCCCAGGGGCTTGGCTTTGTCAGAACTTGTACAATCTTCTTTTGATGAAATTATCTGAA
1121 CTCAACATCTAGCACATAGAATGTGTTCAACAAATGCTTGTTGAATGAATAAATTATGACTGCAGACTGGCTCTCCTGCC
1201 TTAAACTAATTTCATCCCAGCCTAGTCTCCTGATGTCTGTGCTCGTTATGCTATGCCATGTTGCTTCAGTCAAACAAGAA
1281 ACACTTACTGAGGGCATATTGTTTGCCCATCATTGTGCAATATGCTGTGGGACATGGGATGTCGTCTCAGTCTTCAAGGA
1361 AATGGAAGGGTTAAGAAATGCATATGAGATTATTACCAATGACACCGTTAATTTATATGATGCTTTAAAATTATCAGAGC
1441 ACTTTCATGTATTTTTCGTGTGACTAGTGAAAAAGACAATGTTGTACAAAATTAAAATATATACAGATGCAATAATGTGA
1521 ATAGTTAGGATTTATTAAATGCATTATCTTCAGATCTTTACATGTATAATCTCATTTCTTTCATGCAGTTACTCTGGGAT
1601 ACTGTTCCCATTTGATGGGTAAGAATATTGAAAACCAGAAAAATTAATTATCCCAAGGTTGCATGGCCTTTAGTGGCATA
1681 GCTAGGATTTGAACCAGGCCTGCCTGACTCCAGAGCTCTGGCTAGTATCTATGCTATACTTAGTTGCCTCTCTGTAAGTA
1761 TAATATTGGGCAATTATAACCATTTGAGAACAGGACAATATGTATTAACCTGAAAAGTGTTCATGATGTCAGTGATAGTA
1841 CATGGCCTCCTTATGTATTTACTCAAGGGCCCCAAAAGACCAGAGGCCAGAATCCCTAGTAGTCAGAGCAGTGACAGGTC
1921 AGAAAAAGGCAGCTGAGGTCCAATAGTTATGTCTGTGTATTGCTCATTCTACTTACTGATGGAGCCAGCATGTATCTCAA
2001 CAACTCACCTAGCATTCATCACCCATCCCCAGCATTGGGAAAGGGTCACAATTAAGACCGAAAGGAAACACAAAGTTAAA
2081 TATGGGTTAATTATGTAAGCAGATGCCCCACCACGGCAGGATCCAATCACAGCCGAGGGGCCCAGAAGAGAGCAGCGTAA
2161 GTTATATTCACATAGTTCCCCAAAGGCTTTCAACGGGGGCTACAGGAAGGTGCTAGAAATATTGAGGGGCCTGCCATTAC
2241 TCACCTAGAGCTCACTCTCTGGAGAAGAGGAAAAGGAAGAAGCTATTTCAGCTGCCACATTCTCCCCAATCCCTACTATA
2321 TTATGCTGTCTTTCCTCTTCCTCCTAGCTGGCTTTACATGACCCTAACCCAAAACTACCCTATGGCCCCACACGGGAATG
2401 TGTTCAAACGCCCCGACCCCCACCCCCACCCCCATTCCCAAGCCTCCAACTTAGAACGTTTGTGATTTGGCAGATGGTTT
2481 GTTAGGATCTGAAGGATGAAGAGAAGGGTAGAGGTCACCTGGAGAATGAGTTCAAACTGCCAGGGTCTTCCCTTGGTCTT
2561 TGTGCGTCAGGAAGGACTCCGAGTAATTATTCCCTATGCAGAGACAGGAGAGAGGTCTTGTTTACATGAGTGTGCTGGGG
2641 CAGGGCTGGACAATCCAGGATATGATTGTAGCCATCCCATGTAGAAAGATCAAAAACCAGAACGAAATGAAGACAGCCTC
2721 TCAGAACCTCATAGAACAAGCGTCCAGGTCATCTGCTTGTTTGGTGACTTAGATATACAGGCTTACTGGAACTCCATTCA
2801 CTGTGACCTGAAGTTAAATAATCCCAAAGAGAAAAAGCTACCTGGGGTATTGGTTGATGTTTGGGGTGATAGGGCTGAAT
2881 TTTCTGTGCATTTGTCCAACAAAGGCTTTAGAGCACAAAACCAGGTTCATTCTCCCTACCAAATCTTCAGCTTCCTTCTC
2961 CTCATCCCTCCCCAAAACAAGAACTGTGATTTAATTCCGTACGTTGCGGATGTCACTGCTGACCTATGTAGCTGGAGTAC
3041 TAATCAGGCATCTGACCTGCACTGTCATCCCCTGCCTGGACTTTTGCGATGGACTCTTTGGGGGAAAAACTAACGCTTTT
3121 TAATTATTGTGAAAGCATCATGTGTGTATTGTAGAAGTTTTAGGAAAAAAAGGACAAAATCCAATCCATAAGCTTACCAC
3201 CCAAGACAAACGTGTATTCTTTTGAATATACCTTTTAGTTCTTTTTGGTGTAAATGTACACACGCACACACAGTTGTGGA
3281 TTTTTTTAAACAAAAACTGGATACACTGAATATACTCTTTAATAACTTTTCAAGTGTGTATTTATATTTTAGAATATGTA
3361 ATCCTACACAGATACAAAATTCAAAAAGTACAAACTGCTCTGTAGTCAGAAGTAAATCTTCTCCCTACCCCGTCTGCCAG
3441 CATCTAGTTTCCCTCTAATTTATTTTGCATCCTAGTGGAGATGCTTACACATTGTCAAACATATGTATATATTCTTTTAT
3521 CACACACAAATGGCAGCATATTGGACACTTTTTGTTTTTTGCTCCTTCTGTTCCTTCACTTAATAATATCACGAACATTT
3601 TCGGCATATCAAACTTTCTCAACAGCATCTTCATTGTATGGATGGACCCTTTTTTTATCATCAATCCTCAAATAGTGATT
3681 ATTTCATTTGTTCCCAATCTTCATTGTAAATAGTGTTGCAACTGACATTCTTGTAGCTAAATTTTGCACATGTCTATAAC
3761 GATTTCCTTAGGATAAACTCCAAGAAGAGACTTGCTTGGCTATTTTTAAGAATTTTGATACATGTTGCCAACCACCCTCC
3841 AGAAAGTTTGTACCAAAACGCTCTCCTATTTGGATCCTAGAGAGTACCCTGTTTCCTGCACCCTAACACTAGGTATCATC
3921 ACTTATCAAATCTTTCCCAATTTGGTAGCTGGGATAATAGTATGTCAATGTTATTTTAACTTTCTTTGATTCTTCGCGAA
4001 TAACATTTTCATATGCTTATTGACCATTTGTACTTCTTTCTTTGTGAATTTTCTATTTATTTGATATTGGTATGTTTATT
4081 ATCAATTTGTAATTTTATTAAGAATATTATTTTTGTCAAGAAATGCTGCAAATATGCTTTCCAAGTGCTTTGCTTTCAAA
4161 TTTTGTTTATGGTGCTTTTTGACATACATAAATTCTTAATTCTGC
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgaaaGAGCCUCGAGUCUCGUu 5'
               || | || |||||||| 
Target 5' aatccCTAGTAG-TCAGAGCAg 3'
 1891 - 1911 156.00 -13.40
2 
miRNA  3' cgAAAGAGC---CUCG----AGUCUCGUu 5'
            |||| :|   || |     ||||||| 
Target 5' acTTTCCTGACAGACCAGAACCAGAGCAt 3'
 402 - 430 146.00 -14.80
3 
miRNA  3' cgaaagagccucgAGUCUCGUu 5'
                       |||||||| 
Target 5' tgctttaaaattaTCAGAGCAc 3'
 1421 - 1442 145.00 -14.06
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30466451 18 COSMIC
COSN13593999 25 COSMIC
COSN31511985 40 COSMIC
COSN30471957 48 COSMIC
COSN22974326 435 COSMIC
COSN16429052 718 COSMIC
COSN1170648 2572 COSMIC
COSN19217809 2601 COSMIC
COSN20111438 2688 COSMIC
COSN31961002 2746 COSMIC
COSN21691733 2811 COSMIC
COSN1658361 2890 COSMIC
COSN23585420 3000 COSMIC
COSN14853717 3088 COSMIC
COSN15660473 3089 COSMIC
COSN4758755 3166 COSMIC
COSN6257654 3710 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1175765394 4 dbSNP
rs759348074 8 dbSNP
rs765184388 13 dbSNP
rs1207322602 20 dbSNP
rs1007935305 23 dbSNP
rs372495990 24 dbSNP
rs377087837 25 dbSNP
rs370437849 26 dbSNP
rs374827663 30 dbSNP
rs376686349 31 dbSNP
rs1176740822 33 dbSNP
rs1389423781 38 dbSNP
rs138080546 39 dbSNP
rs1309358358 40 dbSNP
rs746088217 50 dbSNP
rs957313550 56 dbSNP
rs1246280116 58 dbSNP
rs998069833 64 dbSNP
rs540268668 65 dbSNP
rs143740062 69 dbSNP
rs954070699 70 dbSNP
rs985973019 72 dbSNP
rs990097560 73 dbSNP
rs1023281314 85 dbSNP
rs1171919439 93 dbSNP
rs765176893 101 dbSNP
rs968081242 106 dbSNP
rs1157358343 109 dbSNP
rs190117875 113 dbSNP
rs978231902 114 dbSNP
rs752829393 121 dbSNP
rs1167858266 128 dbSNP
rs1425072915 133 dbSNP
rs924077698 134 dbSNP
rs149901731 142 dbSNP
rs1482268413 145 dbSNP
rs1400740766 146 dbSNP
rs1199081632 149 dbSNP
rs1322475724 150 dbSNP
rs981505260 160 dbSNP
rs535214033 161 dbSNP
rs1256419806 164 dbSNP
rs1438168093 169 dbSNP
rs1322408388 171 dbSNP
rs1312176212 176 dbSNP
rs1227104698 185 dbSNP
rs916922748 187 dbSNP
rs777073486 189 dbSNP
rs1332438594 190 dbSNP
rs144093679 196 dbSNP
rs148272345 197 dbSNP
rs972252110 200 dbSNP
rs1328880767 201 dbSNP
rs1458944694 202 dbSNP
rs888224352 203 dbSNP
rs777946984 204 dbSNP
rs1355953063 210 dbSNP
rs1382149818 213 dbSNP
rs1178963075 219 dbSNP
rs930781130 220 dbSNP
rs1205731306 227 dbSNP
rs1289223699 236 dbSNP
rs1049319422 237 dbSNP
rs59260140 249 dbSNP
rs570696203 254 dbSNP
rs943418776 255 dbSNP
rs1219534777 257 dbSNP
rs1254072238 260 dbSNP
rs757001767 268 dbSNP
rs1356408704 269 dbSNP
rs1310669173 276 dbSNP
rs1239791344 279 dbSNP
rs1040352872 320 dbSNP
rs1375165512 324 dbSNP
rs1306159226 328 dbSNP
rs901961294 332 dbSNP
rs1388145891 335 dbSNP
rs1391052499 336 dbSNP
rs1292412575 337 dbSNP
rs556005770 338 dbSNP
rs1362333059 341 dbSNP
rs45485793 360 dbSNP
rs1438786449 368 dbSNP
rs1031688308 373 dbSNP
rs892989124 382 dbSNP
rs1200788491 384 dbSNP
rs745746902 385 dbSNP
rs776191043 387 dbSNP
rs1029562011 393 dbSNP
rs889814190 395 dbSNP
rs1189509277 407 dbSNP
rs1006910824 416 dbSNP
rs1011787053 418 dbSNP
rs1022915042 422 dbSNP
rs77189095 429 dbSNP
rs1216507003 432 dbSNP
rs1352235399 433 dbSNP
rs575746652 434 dbSNP
rs1035341079 435 dbSNP
rs1402479604 445 dbSNP
rs1341847928 455 dbSNP
rs960840374 457 dbSNP
rs992847539 460 dbSNP
rs961001441 461 dbSNP
rs543137479 463 dbSNP
rs1406789654 467 dbSNP
rs1377219343 469 dbSNP
rs948282764 469 dbSNP
rs150821318 477 dbSNP
rs909507599 478 dbSNP
rs1263990901 483 dbSNP
rs1193087522 493 dbSNP
rs1326109722 494 dbSNP
rs1399314595 495 dbSNP
rs76157010 502 dbSNP
rs1344755947 506 dbSNP
rs1254991687 507 dbSNP
rs1221288607 508 dbSNP
rs1303147200 510 dbSNP
rs540797746 515 dbSNP
rs1278255685 516 dbSNP
rs930837059 518 dbSNP
rs1336337473 522 dbSNP
rs897014356 524 dbSNP
rs1243972467 526 dbSNP
rs933800251 526 dbSNP
rs1040128067 532 dbSNP
rs1051348423 533 dbSNP
rs1424664105 534 dbSNP
rs10147402 536 dbSNP
rs539056459 537 dbSNP
rs1317686185 538 dbSNP
rs901656751 539 dbSNP
rs1200973503 542 dbSNP
rs78487640 543 dbSNP
rs903859630 547 dbSNP
rs1336900404 548 dbSNP
rs1285508298 553 dbSNP
rs562495512 562 dbSNP
rs1339844504 564 dbSNP
rs999586926 567 dbSNP
rs910846103 569 dbSNP
rs1187437478 570 dbSNP
rs529687967 573 dbSNP
rs1473472434 574 dbSNP
rs1163975757 576 dbSNP
rs1472745919 577 dbSNP
rs1024185645 583 dbSNP
rs1180858438 584 dbSNP
rs1042661682 587 dbSNP
rs1040382298 594 dbSNP
rs901864719 605 dbSNP
rs1197614379 607 dbSNP
rs934639517 608 dbSNP
rs547786439 615 dbSNP
rs796445624 616 dbSNP
rs962353008 619 dbSNP
rs1463723110 620 dbSNP
rs769774047 623 dbSNP
rs1241960564 624 dbSNP
rs1377382072 626 dbSNP
rs893202284 633 dbSNP
rs972506845 635 dbSNP
rs139640345 646 dbSNP
rs1333086240 648 dbSNP
rs933694374 654 dbSNP
rs1404872970 655 dbSNP
rs527405578 660 dbSNP
rs767204761 663 dbSNP
rs775355948 681 dbSNP
rs1420901807 683 dbSNP
rs1002802186 684 dbSNP
rs552326113 688 dbSNP
rs748815905 689 dbSNP
rs1332053365 697 dbSNP
rs868702923 698 dbSNP
rs1044016188 706 dbSNP
rs1035580568 707 dbSNP
rs961032427 708 dbSNP
rs1338805480 716 dbSNP
rs116719114 717 dbSNP
rs538130652 718 dbSNP
rs999493894 724 dbSNP
rs1218685516 730 dbSNP
rs1317577611 733 dbSNP
rs1052361755 734 dbSNP
rs952568174 745 dbSNP
rs985002880 746 dbSNP
rs549854263 751 dbSNP
rs1023841347 758 dbSNP
rs1260453293 766 dbSNP
rs1275668782 770 dbSNP
rs1435776972 774 dbSNP
rs1343709130 776 dbSNP
rs181635264 781 dbSNP
rs1300195333 791 dbSNP
rs536607701 793 dbSNP
rs557297430 795 dbSNP
rs5809493 796 dbSNP
rs910699663 810 dbSNP
rs72721905 811 dbSNP
rs1016511663 824 dbSNP
rs1416547104 829 dbSNP
rs976323398 833 dbSNP
rs57602933 836 dbSNP
rs1479939130 837 dbSNP
rs1076265 845 dbSNP
rs1488562709 846 dbSNP
rs1262427259 856 dbSNP
rs13738 859 dbSNP
rs573799366 867 dbSNP
rs1050651 870 dbSNP
rs1043511034 885 dbSNP
rs1321725671 886 dbSNP
rs753204842 888 dbSNP
rs1219349153 895 dbSNP
rs1340406939 901 dbSNP
rs1287632450 906 dbSNP
rs935211739 913 dbSNP
rs1052395508 914 dbSNP
rs3742849 917 dbSNP
rs562995854 924 dbSNP
rs1404188378 932 dbSNP
rs1172144744 935 dbSNP
rs1187054602 936 dbSNP
rs1013712974 939 dbSNP
rs1418633857 945 dbSNP
rs1387994909 953 dbSNP
rs1002666114 965 dbSNP
rs747146978 968 dbSNP
rs1006814979 970 dbSNP
rs1260267746 975 dbSNP
rs114427981 991 dbSNP
rs1317383698 992 dbSNP
rs1297948467 996 dbSNP
rs1293590952 1001 dbSNP
rs897068409 1005 dbSNP
rs993874892 1009 dbSNP
rs1283948333 1012 dbSNP
rs993741589 1013 dbSNP
rs1027051251 1018 dbSNP
rs1403363828 1021 dbSNP
rs952523959 1024 dbSNP
rs955195160 1027 dbSNP
rs1273431952 1046 dbSNP
rs541392230 1046 dbSNP
rs1007065231 1051 dbSNP
rs1018001300 1062 dbSNP
rs1350769322 1065 dbSNP
rs758471140 1066 dbSNP
rs1212184215 1070 dbSNP
rs986594088 1071 dbSNP
rs976189215 1072 dbSNP
rs923563254 1081 dbSNP
rs1284749412 1091 dbSNP
rs1240192046 1092 dbSNP
rs1199489053 1095 dbSNP
rs1486992993 1095 dbSNP
rs376177354 1101 dbSNP
rs1018451759 1104 dbSNP
rs559741921 1105 dbSNP
rs914570300 1106 dbSNP
rs1322795076 1109 dbSNP
rs963805151 1119 dbSNP
rs1348731189 1120 dbSNP
rs947383141 1131 dbSNP
rs1044875169 1137 dbSNP
rs927365652 1147 dbSNP
rs527367711 1152 dbSNP
rs935285969 1153 dbSNP
rs938527626 1157 dbSNP
rs1056987248 1168 dbSNP
rs1459024763 1179 dbSNP
rs1350328460 1189 dbSNP
rs917950995 1199 dbSNP
rs1196546959 1200 dbSNP
rs867943038 1218 dbSNP
rs897099598 1219 dbSNP
rs1179066175 1236 dbSNP
rs1379146729 1240 dbSNP
rs1454697903 1244 dbSNP
rs994074483 1245 dbSNP
rs1045044205 1246 dbSNP
rs1291206928 1255 dbSNP
rs1048281994 1258 dbSNP
rs1360020081 1259 dbSNP
rs1356519396 1265 dbSNP
rs1417871014 1266 dbSNP
rs1238814330 1273 dbSNP
rs1290869597 1275 dbSNP
rs1315922117 1283 dbSNP
rs1386024039 1284 dbSNP
rs186839630 1285 dbSNP
rs1386420794 1297 dbSNP
rs142833626 1301 dbSNP
rs531359076 1302 dbSNP
rs549957027 1306 dbSNP
rs1402992444 1309 dbSNP
rs1018450012 1314 dbSNP
rs942054780 1315 dbSNP
rs1037906754 1323 dbSNP
rs1309119203 1329 dbSNP
rs897992795 1330 dbSNP
rs900924348 1333 dbSNP
rs771219253 1344 dbSNP
rs568326799 1345 dbSNP
rs1268232203 1346 dbSNP
rs776761655 1351 dbSNP
rs1197427773 1359 dbSNP
rs1030573242 1370 dbSNP
rs1030443508 1371 dbSNP
rs1260786268 1372 dbSNP
rs1204855070 1374 dbSNP
rs192185134 1380 dbSNP
rs1485103128 1381 dbSNP
rs1487990008 1381 dbSNP
rs1234952066 1385 dbSNP
rs776514935 1387 dbSNP
rs1323859584 1393 dbSNP
rs1221174192 1398 dbSNP
rs1282063470 1398 dbSNP
rs1254686127 1400 dbSNP
rs548581187 1400 dbSNP
rs890681545 1403 dbSNP
rs8688 1408 dbSNP
rs1395108047 1414 dbSNP
rs1382505268 1422 dbSNP
rs1304415883 1444 dbSNP
rs35633884 1446 dbSNP
rs534291276 1458 dbSNP
rs146125535 1459 dbSNP
rs1428889250 1480 dbSNP
rs980117064 1480 dbSNP
rs1174319207 1484 dbSNP
rs1478848721 1488 dbSNP
rs1424897561 1490 dbSNP
rs577274389 1490 dbSNP
rs184015766 1502 dbSNP
rs1441453731 1505 dbSNP
rs964143993 1511 dbSNP
rs927407889 1513 dbSNP
rs938731727 1514 dbSNP
rs979144429 1515 dbSNP
rs1201159570 1522 dbSNP
rs1262154466 1522 dbSNP
rs992691378 1525 dbSNP
rs956522675 1536 dbSNP
rs988047568 1539 dbSNP
rs751727725 1540 dbSNP
rs949309442 1545 dbSNP
rs1453147928 1546 dbSNP
rs1457639356 1556 dbSNP
rs1405542398 1557 dbSNP
rs981184297 1557 dbSNP
rs13154 1560 dbSNP
rs926635024 1563 dbSNP
rs942131481 1564 dbSNP
rs1291952549 1575 dbSNP
rs929772301 1597 dbSNP
rs1474698962 1598 dbSNP
rs140104513 1602 dbSNP
rs888337384 1604 dbSNP
rs1331270867 1605 dbSNP
rs574768717 1610 dbSNP
rs1039352742 1619 dbSNP
rs900958783 1624 dbSNP
rs1458845430 1626 dbSNP
rs78313356 1631 dbSNP
rs1307131836 1643 dbSNP
rs1194758528 1646 dbSNP
rs1320543818 1651 dbSNP
rs1242203358 1659 dbSNP
rs780898097 1664 dbSNP
rs553339923 1676 dbSNP
rs1246370567 1680 dbSNP
rs1381756467 1711 dbSNP
rs1274589945 1714 dbSNP
rs1312730851 1723 dbSNP
rs1335254034 1734 dbSNP
rs776137576 1743 dbSNP
rs1197843638 1753 dbSNP
rs1076263 1755 dbSNP
rs1408307479 1759 dbSNP
rs1393429865 1760 dbSNP
rs200088960 1761 dbSNP
rs75862277 1764 dbSNP
rs899507536 1765 dbSNP
rs1383740789 1767 dbSNP
rs1160876058 1772 dbSNP
rs1441107665 1772 dbSNP
rs1312111318 1777 dbSNP
rs780017451 1778 dbSNP
rs749225767 1796 dbSNP
rs980535494 1798 dbSNP
rs1034339752 1802 dbSNP
rs1223124283 1803 dbSNP
rs960002706 1803 dbSNP
rs1289293400 1810 dbSNP
rs992933781 1814 dbSNP
rs1351622530 1819 dbSNP
rs1279191995 1834 dbSNP
rs563984876 1844 dbSNP
rs1009374048 1845 dbSNP
rs186748709 1856 dbSNP
rs1024770997 1858 dbSNP
rs1364278302 1863 dbSNP
rs1251361689 1867 dbSNP
rs143791092 1887 dbSNP
rs980710046 1888 dbSNP
rs926638812 1889 dbSNP
rs983963679 1897 dbSNP
rs1157624423 1899 dbSNP
rs561893901 1905 dbSNP
rs1430746203 1909 dbSNP
rs1420218302 1922 dbSNP
rs909830152 1936 dbSNP
rs942618969 1945 dbSNP
rs1490151076 1947 dbSNP
rs115419511 1950 dbSNP
rs544851589 1951 dbSNP
rs1170490449 1956 dbSNP
rs900865386 1967 dbSNP
rs933619294 1972 dbSNP
rs973370609 1978 dbSNP
rs1222249198 1980 dbSNP
rs1347461552 1991 dbSNP
rs1398514696 1996 dbSNP
rs1283951184 2002 dbSNP
rs1464020371 2019 dbSNP
rs1299206429 2021 dbSNP
rs566869088 2023 dbSNP
rs1377817257 2028 dbSNP
rs1052140405 2030 dbSNP
rs1344106357 2035 dbSNP
rs892206068 2036 dbSNP
rs1432187177 2045 dbSNP
rs1010859365 2052 dbSNP
rs190026621 2060 dbSNP
rs904803963 2061 dbSNP
rs1407868452 2071 dbSNP
rs1176468180 2072 dbSNP
rs1479825736 2072 dbSNP
rs1001809220 2074 dbSNP
rs1034578985 2081 dbSNP
rs912057160 2082 dbSNP
rs1475738806 2094 dbSNP
rs960032103 2107 dbSNP
rs774020923 2113 dbSNP
rs1025769113 2116 dbSNP
rs866570601 2127 dbSNP
rs116805839 2128 dbSNP
rs866313090 2129 dbSNP
rs1039271175 2135 dbSNP
rs182298177 2136 dbSNP
rs1215639627 2148 dbSNP
rs1205172551 2154 dbSNP
rs1000500466 2157 dbSNP
rs1407755085 2158 dbSNP
rs187003730 2158 dbSNP
rs1482974634 2159 dbSNP
rs1336996990 2160 dbSNP
rs892219286 2160 dbSNP
rs1009286033 2164 dbSNP
rs1171963407 2168 dbSNP
rs964196189 2172 dbSNP
rs747749721 2181 dbSNP
rs772802579 2195 dbSNP
rs1418754441 2196 dbSNP
rs1185968506 2200 dbSNP
rs975303276 2206 dbSNP
rs1243593349 2213 dbSNP
rs970567464 2214 dbSNP
rs1002559325 2217 dbSNP
rs1253125449 2227 dbSNP
rs1259694440 2228 dbSNP
rs1234093210 2230 dbSNP
rs192735227 2231 dbSNP
rs933689820 2236 dbSNP
rs1052046208 2237 dbSNP
rs919223192 2254 dbSNP
rs568353269 2258 dbSNP
rs372859176 2271 dbSNP
rs565404786 2271 dbSNP
rs913663161 2275 dbSNP
rs946475521 2280 dbSNP
rs56165422 2281 dbSNP
rs773068570 2286 dbSNP
rs56062706 2291 dbSNP
rs185169552 2297 dbSNP
rs1385603277 2298 dbSNP
rs926225721 2302 dbSNP
rs1442950770 2306 dbSNP
rs1252961709 2307 dbSNP
rs1177784273 2321 dbSNP
rs1480355224 2325 dbSNP
rs1464980622 2326 dbSNP
rs1223864135 2329 dbSNP
rs45560640 2338 dbSNP
rs896063342 2341 dbSNP
rs557755805 2352 dbSNP
rs892125796 2357 dbSNP
rs1375500664 2361 dbSNP
rs1009754212 2369 dbSNP
rs1391676161 2372 dbSNP
rs1371980414 2380 dbSNP
rs1295989498 2381 dbSNP
rs367866066 2385 dbSNP
rs1025633426 2386 dbSNP
rs1302256378 2386 dbSNP
rs906246135 2389 dbSNP
rs560746168 2391 dbSNP
rs1002059540 2392 dbSNP
rs1365694684 2393 dbSNP
rs951428912 2394 dbSNP
rs1405846358 2395 dbSNP
rs145885824 2410 dbSNP
rs879505199 2411 dbSNP
rs61977961 2415 dbSNP
rs1220649592 2416 dbSNP
rs1250231661 2417 dbSNP
rs148581591 2420 dbSNP
rs1212890359 2422 dbSNP
rs1282621801 2423 dbSNP
rs1486010425 2428 dbSNP
rs1216172435 2429 dbSNP
rs188483536 2430 dbSNP
rs1412612139 2432 dbSNP
rs1345992792 2433 dbSNP
rs1476508153 2434 dbSNP
rs1187541189 2435 dbSNP
rs1424863932 2436 dbSNP
rs1453171044 2440 dbSNP
rs1176026946 2443 dbSNP
rs975206267 2444 dbSNP
rs1386863780 2445 dbSNP
rs1418488345 2446 dbSNP
rs1295976307 2449 dbSNP
rs541233353 2456 dbSNP
rs546751312 2458 dbSNP
rs368747577 2459 dbSNP
rs987794979 2467 dbSNP
rs1178593058 2472 dbSNP
rs1019044757 2474 dbSNP
rs913581898 2477 dbSNP
rs1197885713 2484 dbSNP
rs1430848660 2486 dbSNP
rs796217938 2495 dbSNP
rs974941219 2502 dbSNP
rs1043486322 2506 dbSNP
rs1265859009 2508 dbSNP
rs1204957351 2509 dbSNP
rs1323612738 2510 dbSNP
rs926334279 2512 dbSNP
rs1282163886 2519 dbSNP
rs1365194499 2525 dbSNP
rs1230938350 2531 dbSNP
rs1328180695 2534 dbSNP
rs926090425 2540 dbSNP
rs937528807 2544 dbSNP
rs936292004 2545 dbSNP
rs142076296 2547 dbSNP
rs751641885 2557 dbSNP
rs896095945 2560 dbSNP
rs950291536 2561 dbSNP
rs1282245360 2566 dbSNP
rs1047319813 2567 dbSNP
rs1374171480 2568 dbSNP
rs1192843577 2582 dbSNP
rs1427126513 2589 dbSNP
rs945074415 2592 dbSNP
rs887116548 2594 dbSNP
rs1046463115 2597 dbSNP
rs1246514889 2600 dbSNP
rs906282902 2600 dbSNP
rs1198254883 2606 dbSNP
rs1467387624 2608 dbSNP
rs1196057934 2615 dbSNP
rs1251829656 2626 dbSNP
rs1226673163 2627 dbSNP
rs1005929108 2647 dbSNP
rs1339798684 2650 dbSNP
rs151135329 2658 dbSNP
rs1316945448 2659 dbSNP
rs1396149259 2678 dbSNP
rs1382334719 2679 dbSNP
rs937722402 2683 dbSNP
rs543266277 2685 dbSNP
rs1397768359 2688 dbSNP
rs1167833289 2692 dbSNP
rs1439607517 2692 dbSNP
rs45584039 2698 dbSNP
rs1460979464 2700 dbSNP
rs754762852 2704 dbSNP
rs1164670872 2705 dbSNP
rs1409489053 2719 dbSNP
rs1444814668 2719 dbSNP
rs898994692 2724 dbSNP
rs994780910 2743 dbSNP
rs1439028110 2757 dbSNP
rs761947574 2766 dbSNP
rs1250697247 2767 dbSNP
rs1400976401 2774 dbSNP
rs79159098 2777 dbSNP
rs899912565 2786 dbSNP
rs59106321 2791 dbSNP
rs750658713 2794 dbSNP
rs955180791 2797 dbSNP
rs1326321208 2804 dbSNP
rs1282661656 2810 dbSNP
rs367955555 2817 dbSNP
rs964833782 2822 dbSNP
rs193237036 2837 dbSNP
rs1444444546 2845 dbSNP
rs1408516673 2846 dbSNP
rs765017186 2854 dbSNP
rs1277906953 2859 dbSNP
rs1033181395 2880 dbSNP
rs1424436515 2893 dbSNP
rs1412151392 2896 dbSNP
rs551041285 2906 dbSNP
rs967747662 2912 dbSNP
rs979502323 2914 dbSNP
rs1470980536 2917 dbSNP
rs1363848486 2926 dbSNP
rs1180493816 2929 dbSNP
rs926434944 2936 dbSNP
rs1482007721 2937 dbSNP
rs1289343108 2948 dbSNP
rs988909976 2949 dbSNP
rs1222883326 2955 dbSNP
rs1490122394 2959 dbSNP
rs779746373 2961 dbSNP
rs1216004683 2965 dbSNP
rs913503027 2974 dbSNP
rs950309058 2980 dbSNP
rs1278986616 2981 dbSNP
rs141243774 2999 dbSNP
rs753761113 3000 dbSNP
rs1284468828 3001 dbSNP
rs991686770 3003 dbSNP
rs113806475 3004 dbSNP
rs532062184 3008 dbSNP
rs566213104 3009 dbSNP
rs1047315052 3012 dbSNP
rs540153009 3015 dbSNP
rs887347004 3016 dbSNP
rs557454107 3017 dbSNP
rs941409015 3026 dbSNP
rs930477679 3027 dbSNP
rs1047573862 3029 dbSNP
rs1480093975 3030 dbSNP
rs576029425 3036 dbSNP
rs1431759954 3038 dbSNP
rs537140771 3048 dbSNP
rs1009196584 3058 dbSNP
rs1040409874 3064 dbSNP
rs900500671 3070 dbSNP
rs1263874282 3073 dbSNP
rs1223409540 3086 dbSNP
rs146946807 3088 dbSNP
rs573792288 3089 dbSNP
rs1029680267 3091 dbSNP
rs890962255 3093 dbSNP
rs1319461522 3095 dbSNP
rs1455380322 3096 dbSNP
rs1009321686 3097 dbSNP
rs3088143 3100 dbSNP
rs111415333 3102 dbSNP
rs979145825 3106 dbSNP
rs1423016268 3108 dbSNP
rs1033752700 3109 dbSNP
rs1187977827 3112 dbSNP
rs959001301 3115 dbSNP
rs1337618534 3116 dbSNP
rs1186876149 3118 dbSNP
rs771767650 3130 dbSNP
rs559522701 3131 dbSNP
rs1243771341 3140 dbSNP
rs1442947268 3147 dbSNP
rs1292732942 3153 dbSNP
rs1310887281 3156 dbSNP
rs1020837210 3165 dbSNP
rs971706410 3166 dbSNP
rs1274246049 3187 dbSNP
rs982097117 3213 dbSNP
rs1432419886 3215 dbSNP
rs1384576970 3232 dbSNP
rs1194616764 3233 dbSNP
rs1446661751 3237 dbSNP
rs927674842 3247 dbSNP
rs777462993 3249 dbSNP
rs917637238 3255 dbSNP
rs950228572 3264 dbSNP
rs1166505831 3265 dbSNP
rs867938058 3267 dbSNP
rs1186311765 3270 dbSNP
rs1386096160 3274 dbSNP
rs1181291495 3281 dbSNP
rs920362375 3281 dbSNP
rs930340217 3288 dbSNP
rs1205804603 3292 dbSNP
rs1483044900 3292 dbSNP
rs983352283 3303 dbSNP
rs1248667243 3304 dbSNP
rs879153022 3307 dbSNP
rs941593503 3317 dbSNP
rs1038588685 3318 dbSNP
rs1422695647 3318 dbSNP
rs1315327852 3332 dbSNP
rs1227445234 3335 dbSNP
rs1376304484 3341 dbSNP
rs1299432449 3370 dbSNP
rs1474266422 3372 dbSNP
rs921283292 3375 dbSNP
rs34527418 3378 dbSNP
rs932615733 3384 dbSNP
rs1051133092 3389 dbSNP
rs944681173 3390 dbSNP
rs1040678101 3408 dbSNP
rs770770480 3408 dbSNP
rs746668749 3413 dbSNP
rs1177878925 3417 dbSNP
rs147616148 3420 dbSNP
rs757333020 3428 dbSNP
rs781467235 3430 dbSNP
rs1373685005 3432 dbSNP
rs1042597597 3433 dbSNP
rs1490611938 3439 dbSNP
rs1265294717 3442 dbSNP
rs893228080 3446 dbSNP
rs1416875950 3449 dbSNP
rs1294087975 3455 dbSNP
rs575953900 3456 dbSNP
rs1326211093 3458 dbSNP
rs1223853225 3463 dbSNP
rs1349731352 3467 dbSNP
rs1286362456 3470 dbSNP
rs1406762866 3472 dbSNP
rs377113626 3474 dbSNP
rs1001205858 3475 dbSNP
rs971953682 3476 dbSNP
rs1159839508 3479 dbSNP
rs1200369001 3483 dbSNP
rs1033555731 3490 dbSNP
rs1486344716 3492 dbSNP
rs142216191 3493 dbSNP
rs959033709 3506 dbSNP
rs1211165949 3507 dbSNP
rs1481077970 3508 dbSNP
rs184847959 3524 dbSNP
rs1189871340 3527 dbSNP
rs1444909246 3534 dbSNP
rs1024766831 3536 dbSNP
rs1209028034 3541 dbSNP
rs1327856716 3553 dbSNP
rs1265736136 3565 dbSNP
rs950429389 3569 dbSNP
rs1331637248 3571 dbSNP
rs1373399625 3574 dbSNP
rs1477685200 3587 dbSNP
rs1171623006 3588 dbSNP
rs564318561 3593 dbSNP
rs982998930 3594 dbSNP
rs1178704614 3597 dbSNP
rs908716309 3603 dbSNP
rs962885927 3604 dbSNP
rs1174323344 3605 dbSNP
rs1436583306 3608 dbSNP
rs958920741 3616 dbSNP
rs1188766537 3620 dbSNP
rs1464200445 3628 dbSNP
rs1313726428 3637 dbSNP
rs990487399 3643 dbSNP
rs1384610626 3645 dbSNP
rs974734071 3649 dbSNP
rs567859133 3650 dbSNP
rs951811808 3650 dbSNP
rs1255354388 3657 dbSNP
rs1320752058 3665 dbSNP
rs1327345400 3672 dbSNP
rs921483187 3673 dbSNP
rs932689677 3686 dbSNP
rs1298116524 3691 dbSNP
rs1051044455 3692 dbSNP
rs1434581960 3694 dbSNP
rs1301794675 3698 dbSNP
rs912672375 3712 dbSNP
rs1338706377 3713 dbSNP
rs150138137 3714 dbSNP
rs1329099380 3722 dbSNP
rs983605167 3726 dbSNP
rs1301597842 3730 dbSNP
rs1373971147 3750 dbSNP
rs549772195 3750 dbSNP
rs1168378558 3752 dbSNP
rs1042447495 3761 dbSNP
rs1227030163 3766 dbSNP
rs903685926 3769 dbSNP
rs1387946728 3770 dbSNP
rs12147499 3772 dbSNP
rs1234461068 3787 dbSNP
rs1000669112 3797 dbSNP
rs1442485098 3817 dbSNP
rs56311777 3823 dbSNP
rs895058889 3825 dbSNP
rs763447200 3842 dbSNP
rs529367746 3851 dbSNP
rs1198632498 3855 dbSNP
rs1024633087 3856 dbSNP
rs547562044 3860 dbSNP
rs1227397839 3861 dbSNP
rs1262197110 3864 dbSNP
rs1317410525 3865 dbSNP
rs1245883268 3867 dbSNP
rs1339912417 3869 dbSNP
rs188147226 3878 dbSNP
rs1393599826 3882 dbSNP
rs1371750431 3885 dbSNP
rs555376371 3888 dbSNP
rs1428241652 3892 dbSNP
rs1367915493 3895 dbSNP
rs1015976923 3900 dbSNP
rs1165082033 3902 dbSNP
rs1472946503 3911 dbSNP
rs1254748354 3927 dbSNP
rs963212964 3928 dbSNP
rs974261253 3930 dbSNP
rs1028571928 3934 dbSNP
rs1054419418 3938 dbSNP
rs1454654877 3939 dbSNP
rs1420730154 3941 dbSNP
rs1252468296 3946 dbSNP
rs893136447 3953 dbSNP
rs374778633 3956 dbSNP
rs1481945864 3957 dbSNP
rs1293717324 3961 dbSNP
rs1210635805 3965 dbSNP
rs112123498 3969 dbSNP
rs1282463334 3970 dbSNP
rs1363284849 3978 dbSNP
rs149318964 3984 dbSNP
rs1160473242 3986 dbSNP
rs180682478 3996 dbSNP
rs537007327 3997 dbSNP
rs115578511 3998 dbSNP
rs774896641 3999 dbSNP
rs978588816 4006 dbSNP
rs1160888486 4009 dbSNP
rs995752787 4011 dbSNP
rs1412150897 4012 dbSNP
rs1181318943 4017 dbSNP
rs925381431 4029 dbSNP
rs143668854 4049 dbSNP
rs1199349533 4061 dbSNP
rs951676647 4066 dbSNP
rs1054944718 4072 dbSNP
rs1288014821 4073 dbSNP
rs1207181441 4080 dbSNP
rs1329929881 4081 dbSNP
rs1267630921 4083 dbSNP
rs895093078 4096 dbSNP
rs983251862 4097 dbSNP
rs567511745 4107 dbSNP
rs1305731820 4109 dbSNP
rs1329770182 4110 dbSNP
rs965782550 4110 dbSNP
rs1436876355 4121 dbSNP
rs1388694701 4126 dbSNP
rs976327434 4128 dbSNP
rs1455537233 4134 dbSNP
rs1314562020 4144 dbSNP
rs1046322693 4146 dbSNP
rs1172890352 4158 dbSNP
rs921758686 4162 dbSNP
rs886106306 4173 dbSNP
rs1244836783 4177 dbSNP
rs931939638 4186 dbSNP
rs990006417 4189 dbSNP
rs1247442765 4196 dbSNP
rs1206941475 4203 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 23508.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cgaaagagccucgAGUCUCGUu 5'
                       |||||||| 
Target 5' --cuuuaaaauuaUCAGAGCAc 3'
 		1 - 20
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
Experimental Support 2 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 23508.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1065670. RNA binding protein: AGO2. Condition:4-thiouridine ...

- Memczak S; Jens M; Elefsinioti A; Torti F; et al., 2013, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cgaaagagccucgAGUCUCGUu 5'
                       |||||||| 
Target 5' --cuuuaaaauuaUCAGAGCAc 3'
 		1 - 20
Article - Memczak S; Jens M; Elefsinioti A; Torti F; et al.
- Nature, 2013
Circular RNAs (circRNAs) in animals are an enigmatic class of RNA with unknown function. To explore circRNAs systematically, we sequenced and computationally analysed human, mouse and nematode RNA. We detected thousands of well-expressed, stable circRNAs, often showing tissue/developmental-stage-specific expression. Sequence analysis indicated important regulatory functions for circRNAs. We found that a human circRNA, antisense to the cerebellar degeneration-related protein 1 transcript (CDR1as), is densely bound by microRNA (miRNA) effector complexes and harbours 63 conserved binding sites for the ancient miRNA miR-7. Further analyses indicated that CDR1as functions to bind miR-7 in neuronal tissues. Human CDR1as expression in zebrafish impaired midbrain development, similar to knocking down miR-7, suggesting that CDR1as is a miRNA antagonist with a miRNA-binding capacity ten times higher than any other known transcript. Together, our data provide evidence that circRNAs form a large class of post-transcriptional regulators. Numerous circRNAs form by head-to-tail splicing of exons, suggesting previously unrecognized regulatory potential of coding sequences.
LinkOut: [PMID: 23446348]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000256367.2 | 3UTR | CUUUAAAAUUAUCAGAGCACUUUCAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1065670
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / 4-thiouridine, 3_ML_LG
Location of target site ENST00000256367.2 | 3UTR | CUUUAAAAUUAUCAGAGCACUUUCAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23446348 / GSE43573
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
91 hsa-miR-5691 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT091162 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT242227 TTC9 tetratricopeptide repeat domain 9 2 4
MIRT246192 TXNIP thioredoxin interacting protein 2 2
MIRT251553 DCAF7 DDB1 and CUL4 associated factor 7 2 4
MIRT387267 SOX9 SRY-box 9 2 2
MIRT463486 ZC3H11A zinc finger CCCH-type containing 11A 2 12
MIRT494446 BTG2 BTG anti-proliferation factor 2 2 2
MIRT496478 ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif 17 2 2
MIRT501825 NCOA3 nuclear receptor coactivator 3 2 2
MIRT503072 C6orf120 chromosome 6 open reading frame 120 2 2
MIRT504755 TEP1 telomerase associated protein 1 2 4
MIRT505971 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT511868 GOLGA7 golgin A7 2 6
MIRT512900 UBL4A ubiquitin like 4A 2 2
MIRT513048 LYPD6 LY6/PLAUR domain containing 6 2 6
MIRT523772 FAM83D family with sequence similarity 83 member D 2 2
MIRT525126 RPS11 ribosomal protein S11 2 2
MIRT525816 VIMP selenoprotein S 2 10
MIRT531222 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT531729 SLC2A9 solute carrier family 2 member 9 2 2
MIRT536282 LIMA1 LIM domain and actin binding 1 2 2
MIRT537291 G3BP1 G3BP stress granule assembly factor 1 2 2
MIRT537724 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT547940 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 2
MIRT554177 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT555015 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT576717 Wars tryptophanyl-tRNA synthetase 2 2
MIRT607484 HEBP2 heme binding protein 2 2 2
MIRT610786 KLK2 kallikrein related peptidase 2 2 2
MIRT611491 ZNF440 zinc finger protein 440 2 2
MIRT613986 DBT dihydrolipoamide branched chain transacylase E2 2 2
MIRT615782 KIAA0319L KIAA0319 like 2 2
MIRT620563 WBSCR27 methyltransferase like 27 2 4
MIRT624157 DGKE diacylglycerol kinase epsilon 2 2
MIRT626088 MKLN1 muskelin 1 2 2
MIRT629481 GSN gelsolin 2 2
MIRT636645 CDK4 cyclin dependent kinase 4 2 2
MIRT638074 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT638442 PLXDC2 plexin domain containing 2 2 2
MIRT641025 KLHL7 kelch like family member 7 2 2
MIRT641539 MOCOS molybdenum cofactor sulfurase 2 2
MIRT643004 ZNF829 zinc finger protein 829 2 2
MIRT643092 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT644979 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT645912 PLXNA3 plexin A3 2 2
MIRT646605 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT648033 FADS6 fatty acid desaturase 6 2 2
MIRT657491 HBEGF heparin binding EGF like growth factor 2 2
MIRT658381 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT659695 CD200 CD200 molecule 2 2
MIRT661276 TEX9 testis expressed 9 2 2
MIRT661348 DYRK4 dual specificity tyrosine phosphorylation regulated kinase 4 2 2
MIRT662948 JPH2 junctophilin 2 2 2
MIRT663225 PPY pancreatic polypeptide 2 2
MIRT663280 SPN sialophorin 2 2
MIRT663335 ZNF74 zinc finger protein 74 2 2
MIRT664344 C16orf45 chromosome 16 open reading frame 45 2 2
MIRT664855 TBRG4 transforming growth factor beta regulator 4 2 2
MIRT665484 VPS53 VPS53, GARP complex subunit 2 2
MIRT666428 SH2B3 SH2B adaptor protein 3 2 2
MIRT668162 GDE1 glycerophosphodiester phosphodiesterase 1 2 2
MIRT670170 CCDC142 coiled-coil domain containing 142 2 2
MIRT671277 MTO1 mitochondrial tRNA translation optimization 1 2 2
MIRT672284 GP2 glycoprotein 2 2 2
MIRT672435 RAB10 RAB10, member RAS oncogene family 2 2
MIRT672646 SLC25A16 solute carrier family 25 member 16 2 4
MIRT672760 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT672834 AKR7L aldo-keto reductase family 7 like (gene/pseudogene) 2 2
MIRT672841 ICOSLG inducible T-cell costimulator ligand 2 2
MIRT673080 AK1 adenylate kinase 1 2 2
MIRT673148 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT673323 THAP1 THAP domain containing 1 2 2
MIRT673893 DCTN6 dynactin subunit 6 2 2
MIRT674182 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT674607 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT674740 SLC16A1 solute carrier family 16 member 1 2 2
MIRT675140 MOGAT1 monoacylglycerol O-acyltransferase 1 2 4
MIRT675194 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT675886 SNAP29 synaptosome associated protein 29 2 2
MIRT679163 PSMB2 proteasome subunit beta 2 2 2
MIRT680337 ZNF281 zinc finger protein 281 2 2
MIRT706699 GPR155 G protein-coupled receptor 155 2 2
MIRT706911 THAP6 THAP domain containing 6 2 2
MIRT707880 SLC45A4 solute carrier family 45 member 4 2 2
MIRT709097 SEPT4 septin 4 2 2
MIRT709408 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT710845 FAM210A family with sequence similarity 210 member A 2 2
MIRT711358 VPS8 VPS8, CORVET complex subunit 2 2
MIRT718590 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT723649 RPTN repetin 2 2
MIRT724208 NUP205 nucleoporin 205 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-5691 Vemurafenib 42611257 NSC761431 approved sensitive cell line (451Lu)

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