miRTarBase - #MIRT257298


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pre-miRNA Information
pre-miRNA hsa-mir-4796   
Genomic Coordinates chr3: 114743445 - 114743525
Description Homo sapiens miR-4796 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4796-3p
Sequence 53| UAAAGUGGCAGAGUAUAGACAC |74
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN9734363 9 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1045223845 8 dbSNP
rs185555286 18 dbSNP
Putative Targets

Gene Information
Gene Symbol FOXC1   
Synonyms ARA, ASGD3, FKHL7, FREAC-3, FREAC3, IGDA, IHG1, IRID1, RIEG3
Description forkhead box C1
Transcript NM_001453   
Expression
Putative miRNA Targets on FOXC1
3'UTR of FOXC1
(miRNA target sites are highlighted)		 
>FOXC1|NM_001453|3'UTR
   1 CACACCCTCAAAGCCGAACTAAATCGAACCCCAAAGCAGGAAAAGCTAAAGGAACCCATCAAGGCAAAATCGAAACTAAA
  81 AAAAAAAAATCCAATTAAAAAAAACCCCTGAGAATATTCACCACACCAGCGAACAGAATATCCCTCCAAAAATTCAGCTC
 161 ACCAGCACCAGCACGAAGAAAACTCTATTTTCTTAACCGATTAATTCAGAGCCACCTCCACTTTGCCTTGTCTAAATAAA
 241 CAAACCCGTAAACTGTTTTATACAGAGACAGCAAAATCTTGGTTTATTAAAGGACAGTGTTACTCCAGATAACACGTAAG
 321 TTTCTTCTTGCTTTTCAGAGACCTGCTTTCCCCTCCTCCCGTCTCCCCTCTCTTGCCTTCTTCCTTGCCTCTCACCTGTA
 401 AGATATTATTTTATCCTATGTTGAAGGGAGGGGGAAAGTCCCCGTTTATGAAAGTCGCTTTCTTTTTATTCATGGACTTG
 481 TTTTAAAATGTAAATTGCAACATAGTAATTTATTTTTAATTTGTAGTTGGATGTCGTGGACCAAACGCCAGAAAGTGTTC
 561 CCAAAACCTGACGTTAAATTGCCTGAAACTTTAAATTGTGCTTTTTTTCTCATTATAAAAAGGGAAACTGTATTAATCTT
 641 ATTCTATCCTCTTTTCTTTCTTTTTGTTGAACATATTCATTGTTTGTTTATTAATAAATTACCATTCAGTTTGAATGAGA
 721 CCTATATGTCTGGATACTTTAATAGAGCTTTAATTATTACGAAAAAAGATTTCAGAGATAAAACACTAGAAGTTACCTAT
 801 TCTCCACCTAAATCTCTGAAAAATGGAGAAACCCTCTGACTAGTCCATGTCAAATTTTACTAAAAGTCTTTTTGTTTAGA
 881 TTTATTTTCCTGCAGCATCTTCTGCAAAATGTACTATATAGTCAGCTTGCTTTGAGGCTAGTAAAAAGATATTTTTCTAA
 961 ACAGATTGGAGTTGGCATATAAACAAATACGTTTTCTCACTAATGACAGTCCATGATTCGGAAATTTTAAGCCCATGAAT
1041 CAGCCGCGGTCTTACCACGGTGATGCCTGTGTGCCGAGAGATGGGACTGTGCGGCCAGATATGCACAGATAAATATTTGG
1121 CTTGTGTATTCCATATAAAATTGCAGTGCATATTATACATCCCTGTGAGCCAGATGCTGAATAGATATTTTCCTATTATT
1201 TCAGTCCTTTATAAAAGGAAAAATAAACCAGTTTTTAAATGTATGTATATAATTCTCCCCCATTTACAATCCTTCATGTA
1281 TTACATAGAAGGATTGCTTTTTTAAAAATATACTGCGGGTTGGAAAGGGATATTTAATCTTTGAGAAACTATTTTAGAAA
1361 ATATGTTTGTAGAACAATTATTTTTGAAAAAGATTTAAAGCAATAACAAGAAGGAAGGCGAGAGGAGCAGAACATTTTGG
1441 TCTAGGGTGGTTTCTTTTTAAACCATTTTTTCTTGTTAATTTACAGTTAAACCTAGGGGACAATCCGGATTGGCCCTCCC
1521 CCTTTTGTAAATAACCCAGGAAATGTAATAAATTCATTATCTTAGGGTGATCTGCCCTGCCAATCAGACTTTGGGGAGAT
1601 GGCGATTTGATTACAGACGTTCGGGGGGGTGGGGGGCTTGCAGTTTGTTTTGGAGATAATACAGTTTCCTGCTATCTGCC
1681 GCTCCTATCTAGAGGCAACACTTAAGCAGTAATTGCTGTTGCTTGTTGTCAAAATTTGATCATTGTTAAAGGATTGCTGC
1761 AAATAAATACACTTTAATTTCAGTCAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cacagauaUGAGACGGUGAAAu 5'
                  || || ||||||| 
Target 5' tcagagccAC-CT-CCACTTTg 3'
 206 - 225 144.00 -10.20
2 
miRNA  3' caCAGAUAUGAGA--CGGUGAAAu 5'
            ||:| | :|:|   |||:||| 
Target 5' tgGTTTCT-TTTTAAACCATTTTt 3'
 1448 - 1470 133.00 -7.90
3 
miRNA  3' cacAGAUAUGAGA-CGGUGAAAu 5'
             ||| ||:|||  || |||| 
Target 5' taaTCT-TATTCTATCCTCTTTt 3'
 634 - 655 130.00 -9.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1181503 106 ClinVar
183249 735 ClinVar
COSN26976635 14 COSMIC
COSN19659403 27 COSMIC
COSN30454357 31 COSMIC
COSN15624097 68 COSMIC
COSN31600803 70 COSMIC
COSN20075525 72 COSMIC
COSN27220304 90 COSMIC
COSN30131523 93 COSMIC
COSN20045745 105 COSMIC
COSN31588248 105 COSMIC
COSN8513643 172 COSMIC
COSN28770477 188 COSMIC
COSN31547489 221 COSMIC
COSN30135019 268 COSMIC
COSN30401750 279 COSMIC
COSN31517901 279 COSMIC
COSN30141708 294 COSMIC
COSN31540894 309 COSMIC
COSN30533227 345 COSMIC
COSN7697022 381 COSMIC
COSN16361054 442 COSMIC
COSN21702469 481 COSMIC
COSN30114578 494 COSMIC
COSN15968548 573 COSMIC
COSN32110299 586 COSMIC
COSN30130629 746 COSMIC
COSN30135020 762 COSMIC
COSN27213216 784 COSMIC
COSN30129855 806 COSMIC
COSN30127769 822 COSMIC
COSN31593751 833 COSMIC
COSN21529772 837 COSMIC
COSN8513644 840 COSMIC
COSN26566061 844 COSMIC
COSN30113449 864 COSMIC
COSN9971943 991 COSMIC
COSN31563382 1002 COSMIC
COSN31515894 1048 COSMIC
COSN31538095 1094 COSMIC
COSN24301808 1096 COSMIC
COSN30529972 1120 COSMIC
COSN30141029 1128 COSMIC
COSN30129866 1164 COSMIC
COSN19659404 1204 COSMIC
COSN30142326 1252 COSMIC
COSN15624098 1256 COSMIC
COSN15624099 1258 COSMIC
COSN32191710 1276 COSMIC
COSN26555098 1279 COSMIC
COSN30113761 1292 COSMIC
COSN4857222 1304 COSMIC
COSN17153524 1345 COSMIC
COSN30534033 1450 COSMIC
COSN30128834 1475 COSMIC
COSN31543010 1543 COSMIC
COSN31592770 1559 COSMIC
COSN30510390 1574 COSMIC
COSN23868924 1580 COSMIC
COSN30144139 1600 COSMIC
COSN25630585 1601 COSMIC
COSN30143578 1613 COSMIC
COSN26602065 1623 COSMIC
COSN31579436 1630 COSMIC
COSN9499950 1631 COSMIC
COSN30126227 1704 COSMIC
COSN31609183 1747 COSMIC
rs2745599 1345 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1356049082 4 dbSNP
rs550008409 6 dbSNP
rs770747430 7 dbSNP
rs1309394453 8 dbSNP
rs774178122 11 dbSNP
rs1255629093 14 dbSNP
rs569615621 16 dbSNP
rs1395644292 19 dbSNP
rs776933515 19 dbSNP
rs762444077 20 dbSNP
rs1488149748 23 dbSNP
rs753828358 24 dbSNP
rs755098873 30 dbSNP
rs199666960 31 dbSNP
rs1429781292 32 dbSNP
rs758797660 33 dbSNP
rs766539992 35 dbSNP
rs370151681 36 dbSNP
rs1351404767 37 dbSNP
rs374620749 38 dbSNP
rs781401575 46 dbSNP
rs773884905 48 dbSNP
rs748021580 49 dbSNP
rs756124189 52 dbSNP
rs73406893 53 dbSNP
rs903258348 57 dbSNP
rs534974179 58 dbSNP
rs558074909 59 dbSNP
rs933362683 72 dbSNP
rs953785432 77 dbSNP
rs1285728011 78 dbSNP
rs1334614373 78 dbSNP
rs779316749 78 dbSNP
rs1171816932 79 dbSNP
rs1461296707 89 dbSNP
rs1415913194 94 dbSNP
rs1296786615 96 dbSNP
rs1232314245 97 dbSNP
rs1473261626 97 dbSNP
rs889256919 98 dbSNP
rs116336796 106 dbSNP
rs910042588 108 dbSNP
rs537216699 110 dbSNP
rs1284073173 111 dbSNP
rs1354347813 122 dbSNP
rs1349510047 124 dbSNP
rs1277263405 130 dbSNP
rs1225469218 131 dbSNP
rs1286810804 132 dbSNP
rs557556144 137 dbSNP
rs777444017 139 dbSNP
rs972991232 145 dbSNP
rs574031863 148 dbSNP
rs1214688132 158 dbSNP
rs1025952402 159 dbSNP
rs1407613742 160 dbSNP
rs1156876480 167 dbSNP
rs746626978 169 dbSNP
rs778482299 170 dbSNP
rs1260804568 176 dbSNP
rs1381038207 182 dbSNP
rs1443885886 183 dbSNP
rs1467096969 183 dbSNP
rs1045714544 188 dbSNP
rs1222117634 193 dbSNP
rs1446052631 195 dbSNP
rs1033531452 200 dbSNP
rs1236765850 204 dbSNP
rs959454603 216 dbSNP
rs543142683 219 dbSNP
rs1234127445 220 dbSNP
rs1369429649 221 dbSNP
rs374954433 226 dbSNP
rs1295644065 236 dbSNP
rs780414480 237 dbSNP
rs915154568 238 dbSNP
rs947423341 239 dbSNP
rs977398485 246 dbSNP
rs924585817 248 dbSNP
rs1361188087 249 dbSNP
rs1173100474 251 dbSNP
rs1452497344 258 dbSNP
rs933435061 264 dbSNP
rs1396876064 267 dbSNP
rs770525624 270 dbSNP
rs1474984667 273 dbSNP
rs368696215 279 dbSNP
rs943515912 288 dbSNP
rs1156410607 290 dbSNP
rs1278905567 297 dbSNP
rs573322518 298 dbSNP
rs1037993239 306 dbSNP
rs745354528 308 dbSNP
rs1304110537 310 dbSNP
rs62390613 310 dbSNP
rs1042305444 315 dbSNP
rs1047409599 316 dbSNP
rs1268804146 317 dbSNP
rs902445399 327 dbSNP
rs1026186793 328 dbSNP
rs1312337969 333 dbSNP
rs1339287626 337 dbSNP
rs997817850 338 dbSNP
rs1003323508 339 dbSNP
rs181633430 341 dbSNP
rs959272757 347 dbSNP
rs1477940854 351 dbSNP
rs1029337099 352 dbSNP
rs953877244 354 dbSNP
rs1022049158 359 dbSNP
rs774927159 362 dbSNP
rs977951060 369 dbSNP
rs924667152 372 dbSNP
rs1017118005 373 dbSNP
rs757677458 377 dbSNP
rs962887422 378 dbSNP
rs779102893 384 dbSNP
rs748674372 392 dbSNP
rs918803355 394 dbSNP
rs527848565 395 dbSNP
rs1200893619 398 dbSNP
rs971622442 399 dbSNP
rs1277635793 403 dbSNP
rs1341337414 403 dbSNP
rs1292950487 408 dbSNP
rs987612826 416 dbSNP
rs910619308 420 dbSNP
rs981696683 422 dbSNP
rs927291357 427 dbSNP
rs1352759512 428 dbSNP
rs1172538167 434 dbSNP
rs1465989492 440 dbSNP
rs1416672414 441 dbSNP
rs1238281094 450 dbSNP
rs1037877254 451 dbSNP
rs937369274 454 dbSNP
rs1256162161 461 dbSNP
rs533280855 472 dbSNP
rs914662049 482 dbSNP
rs547974202 486 dbSNP
rs1042253141 499 dbSNP
rs902393159 504 dbSNP
rs1400479244 509 dbSNP
rs1318993382 510 dbSNP
rs933894998 523 dbSNP
rs1231619002 525 dbSNP
rs1051035997 531 dbSNP
rs1323733501 533 dbSNP
rs1313521976 534 dbSNP
rs906222374 544 dbSNP
rs1332574324 545 dbSNP
rs1399666627 546 dbSNP
rs77607008 548 dbSNP
rs1393387054 553 dbSNP
rs1054913036 574 dbSNP
rs1006985237 576 dbSNP
rs34877245 577 dbSNP
rs1010571137 580 dbSNP
rs1381663103 583 dbSNP
rs1181001203 602 dbSNP
rs1458615771 610 dbSNP
rs898244928 614 dbSNP
rs1252687696 615 dbSNP
rs1208494249 618 dbSNP
rs1489578771 620 dbSNP
rs994255163 625 dbSNP
rs1266311285 629 dbSNP
rs772515842 630 dbSNP
rs1315161024 634 dbSNP
rs1022099852 639 dbSNP
rs528961345 640 dbSNP
rs549100468 643 dbSNP
rs1390969318 644 dbSNP
rs1029993018 648 dbSNP
rs1200473920 649 dbSNP
rs954768273 650 dbSNP
rs1361835609 651 dbSNP
rs1158727827 652 dbSNP
rs1258567842 652 dbSNP
rs1440838913 653 dbSNP
rs1395068769 657 dbSNP
rs1456933278 661 dbSNP
rs1180078939 673 dbSNP
rs1197168145 675 dbSNP
rs987885802 677 dbSNP
rs1268534128 679 dbSNP
rs1204722008 680 dbSNP
rs1487434632 680 dbSNP
rs1288248870 683 dbSNP
rs1217513071 691 dbSNP
rs1347031180 692 dbSNP
rs1273050921 693 dbSNP
rs373198124 696 dbSNP
rs1331426200 697 dbSNP
rs1294603483 705 dbSNP
rs1035039962 708 dbSNP
rs958712480 710 dbSNP
rs565331544 716 dbSNP
rs1268814441 720 dbSNP
rs771651540 722 dbSNP
rs1298256399 723 dbSNP
rs1433610597 727 dbSNP
rs1433451833 728 dbSNP
rs973455445 731 dbSNP
rs990569401 732 dbSNP
rs35717904 735 dbSNP
rs946126937 736 dbSNP
rs977543159 748 dbSNP
rs1193006729 750 dbSNP
rs1476957589 753 dbSNP
rs923754485 761 dbSNP
rs1376308151 762 dbSNP
rs1478976089 763 dbSNP
rs1485365139 764 dbSNP
rs933834675 774 dbSNP
rs1202055515 776 dbSNP
rs766487149 778 dbSNP
rs889714509 785 dbSNP
rs550980014 787 dbSNP
rs928196365 790 dbSNP
rs1391501908 799 dbSNP
rs1386449675 800 dbSNP
rs942344607 801 dbSNP
rs1038444290 811 dbSNP
rs533511348 821 dbSNP
rs571583124 822 dbSNP
rs1025377885 833 dbSNP
rs537378863 835 dbSNP
rs1403615454 837 dbSNP
rs377765731 846 dbSNP
rs907364869 850 dbSNP
rs1278601164 860 dbSNP
rs557259848 861 dbSNP
rs1171595558 864 dbSNP
rs946499603 869 dbSNP
rs1043440034 882 dbSNP
rs902396688 890 dbSNP
rs1249786791 891 dbSNP
rs1196490023 900 dbSNP
rs1266733504 903 dbSNP
rs35607877 904 dbSNP
rs1353824696 916 dbSNP
rs1208885860 917 dbSNP
rs574217067 928 dbSNP
rs1034581487 938 dbSNP
rs1264749097 944 dbSNP
rs1244948411 948 dbSNP
rs959222279 953 dbSNP
rs1029465164 958 dbSNP
rs549895092 959 dbSNP
rs1194922404 966 dbSNP
rs1332467460 967 dbSNP
rs1461117583 967 dbSNP
rs1262897723 978 dbSNP
rs1022043424 986 dbSNP
rs1477149158 987 dbSNP
rs560601928 997 dbSNP
rs1473187638 998 dbSNP
rs1363328041 1005 dbSNP
rs140591342 1020 dbSNP
rs977484540 1034 dbSNP
rs371193842 1040 dbSNP
rs1017629366 1043 dbSNP
rs923368123 1045 dbSNP
rs964693942 1046 dbSNP
rs973507863 1047 dbSNP
rs1306477997 1049 dbSNP
rs1369146515 1056 dbSNP
rs573385129 1057 dbSNP
rs1238527932 1058 dbSNP
rs1027738401 1059 dbSNP
rs1310429500 1061 dbSNP
rs1436264009 1067 dbSNP
rs545386506 1068 dbSNP
rs1406195390 1076 dbSNP
rs954747882 1077 dbSNP
rs1359917061 1088 dbSNP
rs1156935391 1089 dbSNP
rs987045658 1090 dbSNP
rs190526847 1093 dbSNP
rs1298626264 1094 dbSNP
rs1476895837 1096 dbSNP
rs1248265788 1099 dbSNP
rs1199064433 1102 dbSNP
rs911099579 1105 dbSNP
rs1446074650 1106 dbSNP
rs942608051 1108 dbSNP
rs529818974 1114 dbSNP
rs939615139 1117 dbSNP
rs991075728 1123 dbSNP
rs1287411386 1132 dbSNP
rs916272695 1134 dbSNP
rs946385105 1142 dbSNP
rs1276986857 1143 dbSNP
rs1437372866 1144 dbSNP
rs1314708825 1156 dbSNP
rs1321801334 1159 dbSNP
rs1043492044 1167 dbSNP
rs1421641072 1174 dbSNP
rs1243524293 1181 dbSNP
rs1175211232 1183 dbSNP
rs902279141 1184 dbSNP
rs1426930068 1185 dbSNP
rs1191627827 1187 dbSNP
rs984253 1188 dbSNP
rs1195170946 1189 dbSNP
rs929669731 1191 dbSNP
rs1046778204 1193 dbSNP
rs182014366 1199 dbSNP
rs890934328 1204 dbSNP
rs1216843912 1207 dbSNP
rs1262956965 1219 dbSNP
rs1002963173 1228 dbSNP
rs1487482078 1228 dbSNP
rs34470720 1229 dbSNP
rs1257394346 1230 dbSNP
rs894683660 1231 dbSNP
rs1402106230 1240 dbSNP
rs1341148857 1243 dbSNP
rs1302344316 1244 dbSNP
rs1018185743 1248 dbSNP
rs35347817 1251 dbSNP
rs529133151 1253 dbSNP
rs1012235779 1256 dbSNP
rs1185582616 1257 dbSNP
rs1382223531 1259 dbSNP
rs1421246610 1260 dbSNP
rs1021899806 1270 dbSNP
rs1477949071 1272 dbSNP
rs1420573877 1279 dbSNP
rs967348287 1286 dbSNP
rs994831470 1287 dbSNP
rs186543284 1291 dbSNP
rs1030386783 1294 dbSNP
rs1211479052 1299 dbSNP
rs1457562388 1300 dbSNP
rs552498486 1303 dbSNP
rs765022070 1304 dbSNP
rs1304370247 1305 dbSNP
rs1220627774 1318 dbSNP
rs1035627483 1323 dbSNP
rs761625675 1327 dbSNP
rs1462867624 1329 dbSNP
rs2745599 1345 dbSNP
rs772836394 1347 dbSNP
rs1312332569 1349 dbSNP
rs1303315105 1352 dbSNP
rs189813928 1354 dbSNP
rs1397773979 1355 dbSNP
rs1333123102 1357 dbSNP
rs1465812437 1361 dbSNP
rs1367590270 1362 dbSNP
rs1162064279 1365 dbSNP
rs1425001424 1366 dbSNP
rs1240446654 1375 dbSNP
rs1284790010 1376 dbSNP
rs1184689387 1377 dbSNP
rs762904432 1393 dbSNP
rs963939040 1394 dbSNP
rs1315507067 1401 dbSNP
rs1439629585 1402 dbSNP
rs916825230 1405 dbSNP
rs1200982239 1408 dbSNP
rs1265128264 1408 dbSNP
rs557505558 1408 dbSNP
rs979070591 1408 dbSNP
rs767916595 1410 dbSNP
rs1313546694 1412 dbSNP
rs974379714 1417 dbSNP
rs919862089 1419 dbSNP
rs923586166 1429 dbSNP
rs763914229 1431 dbSNP
rs1046723418 1434 dbSNP
rs550941173 1435 dbSNP
rs1447308114 1440 dbSNP
rs928351040 1441 dbSNP
rs1291382417 1443 dbSNP
rs1459133442 1444 dbSNP
rs181076077 1447 dbSNP
rs1349889157 1448 dbSNP
rs752952900 1455 dbSNP
rs935089761 1461 dbSNP
rs1419617439 1465 dbSNP
rs1379059400 1466 dbSNP
rs1180870440 1477 dbSNP
rs938430342 1481 dbSNP
rs1050851728 1489 dbSNP
rs912408104 1489 dbSNP
rs1055584724 1491 dbSNP
rs1489589542 1492 dbSNP
rs3799328 1499 dbSNP
rs756309855 1500 dbSNP
rs1483235941 1503 dbSNP
rs1202296565 1504 dbSNP
rs1351387567 1514 dbSNP
rs1240129693 1518 dbSNP
rs1039676836 1529 dbSNP
rs1442402634 1531 dbSNP
rs551307028 1532 dbSNP
rs1043670673 1537 dbSNP
rs1367941744 1544 dbSNP
rs1440333143 1555 dbSNP
rs903441744 1562 dbSNP
rs185531077 1566 dbSNP
rs536815357 1573 dbSNP
rs1030334389 1574 dbSNP
rs1160920540 1575 dbSNP
rs1378774955 1577 dbSNP
rs1435119104 1579 dbSNP
rs1178030199 1581 dbSNP
rs954727073 1584 dbSNP
rs564615118 1586 dbSNP
rs553305445 1587 dbSNP
rs1465508614 1593 dbSNP
rs866492467 1599 dbSNP
rs1334548372 1602 dbSNP
rs1269927835 1606 dbSNP
rs1049107628 1611 dbSNP
rs886411391 1613 dbSNP
rs1446788581 1615 dbSNP
rs1307890453 1622 dbSNP
rs879010583 1622 dbSNP
rs1005402281 1623 dbSNP
rs1254014489 1623 dbSNP
rs1352967725 1623 dbSNP
rs566940366 1625 dbSNP
rs370514174 1626 dbSNP
rs757127346 1627 dbSNP
rs1298278221 1628 dbSNP
rs1383261911 1629 dbSNP
rs1402190184 1630 dbSNP
rs778334758 1630 dbSNP
rs1389500439 1631 dbSNP
rs34380836 1632 dbSNP
rs1302456857 1637 dbSNP
rs369046889 1647 dbSNP
rs979626594 1657 dbSNP
rs1194066891 1664 dbSNP
rs923632092 1675 dbSNP
rs1202344570 1676 dbSNP
rs1260477978 1679 dbSNP
rs1458603837 1680 dbSNP
rs1257200906 1681 dbSNP
rs1198157783 1682 dbSNP
rs1231230729 1683 dbSNP
rs1017710743 1687 dbSNP
rs1319640335 1688 dbSNP
rs1270253647 1690 dbSNP
rs1243492691 1696 dbSNP
rs543347962 1702 dbSNP
rs1340360788 1708 dbSNP
rs1332727577 1714 dbSNP
rs1398328998 1723 dbSNP
rs1407215815 1724 dbSNP
rs1331175371 1736 dbSNP
rs1464253443 1739 dbSNP
rs557172454 1743 dbSNP
rs956380500 1748 dbSNP
rs1472488367 1759 dbSNP
rs964197765 1763 dbSNP
rs1425633285 1769 dbSNP
rs533700893 1777 dbSNP
rs1445168180 1782 dbSNP
rs919809545 1785 dbSNP
rs1196586174 1786 dbSNP
rs1425767402 1786 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 2296.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 "PAR-CLIP data was present in GSM714647. RNA binding protein: AGO2. Condition:mildMNase ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000380874.2 | 3UTR | UUAAAGGAUUGCUGCAAAUAAAUACACUUUAAUUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000380874.2 | 3UTR | CAAAUAAAUACACUUUAAUUUCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM714647
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / mildMNase, repB
Location of target site ENST00000380874.2 | 3UTR | AUCAUUGUUAAAGGAUUGCUGCAAAUAAAUACACUUUAAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
276 hsa-miR-4796-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT057030 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT065682 ACVR1B activin A receptor type 1B 2 6
MIRT066973 ATXN7L3B ataxin 7 like 3B 2 2
MIRT068903 TPRG1L tumor protein p63 regulated 1 like 2 2
MIRT069713 FOXJ3 forkhead box J3 2 2
MIRT072259 B2M beta-2-microglobulin 2 10
MIRT074331 TNRC6A trinucleotide repeat containing 6A 2 10
MIRT075132 C16ORF70 chromosome 16 open reading frame 70 2 4
MIRT077079 KRT10 keratin 10 2 8
MIRT084604 BCL2L11 BCL2 like 11 2 8
MIRT088056 UBXN2A UBX domain protein 2A 2 4
MIRT103212 SP4 Sp4 transcription factor 2 6
MIRT108733 XIAP X-linked inhibitor of apoptosis 2 2
MIRT135263 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 8
MIRT140170 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT173042 YTHDF3 YTH N6-methyladenosine RNA binding protein 3 2 2
MIRT182530 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT184890 ULK1 unc-51 like autophagy activating kinase 1 2 2
MIRT187490 PCBP2 poly(rC) binding protein 2 2 4
MIRT188195 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT190442 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT201089 ZNF805 zinc finger protein 805 2 2
MIRT213239 REST RE1 silencing transcription factor 2 2
MIRT213335 KIAA0232 KIAA0232 2 2
MIRT220130 CAV1 caveolin 1 2 2
MIRT257298 FOXC1 forkhead box C1 2 2
MIRT260352 XRCC6 X-ray repair cross complementing 6 2 6
MIRT262478 KLF6 Kruppel like factor 6 2 2
MIRT263459 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT291952 TPM4 tropomyosin 4 2 2
MIRT295277 LZIC leucine zipper and CTNNBIP1 domain containing 2 4
MIRT300679 MAPK1 mitogen-activated protein kinase 1 2 2
MIRT322414 PPP2R2A protein phosphatase 2 regulatory subunit Balpha 2 2
MIRT338103 CLIC4 chloride intracellular channel 4 2 4
MIRT361507 AP1S1 adaptor related protein complex 1 sigma 1 subunit 2 2
MIRT365827 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT371746 ATXN1 ataxin 1 2 2
MIRT375470 NFAT5 nuclear factor of activated T-cells 5 2 6
MIRT387879 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 6
MIRT395213 PRKCB protein kinase C beta 2 2
MIRT407418 IGFBP5 insulin like growth factor binding protein 5 2 2
MIRT442641 TBC1D12 TBC1 domain family member 12 2 2
MIRT442757 NRIP3 nuclear receptor interacting protein 3 2 2
MIRT443435 MAPT microtubule associated protein tau 2 2
MIRT443707 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT444306 SREK1IP1 SREK1 interacting protein 1 2 2
MIRT447332 SSU72 SSU72 homolog, RNA polymerase II CTD phosphatase 2 2
MIRT448310 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT448362 TSR1 TSR1, ribosome maturation factor 2 6
MIRT448388 TP53INP1 tumor protein p53 inducible nuclear protein 1 2 2
MIRT448640 NPNT nephronectin 2 2
MIRT450184 TMEM9B TMEM9 domain family member B 2 2
MIRT452303 EIF5AL1 eukaryotic translation initiation factor 5A-like 1 2 2
MIRT453732 RAP1GDS1 Rap1 GTPase-GDP dissociation stimulator 1 2 2
MIRT455237 KIAA2013 KIAA2013 2 2
MIRT456354 CITED2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 2 2
MIRT457591 NCOA3 nuclear receptor coactivator 3 2 2
MIRT458288 FUT10 fucosyltransferase 10 2 2
MIRT458694 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT462073 CCDC77 coiled-coil domain containing 77 2 2
MIRT462122 AKR7A2 aldo-keto reductase family 7 member A2 2 2
MIRT463267 ZFYVE9 zinc finger FYVE-type containing 9 2 2
MIRT465103 TSC22D3 TSC22 domain family member 3 2 4
MIRT465108 TSC22D2 TSC22 domain family member 2 2 4
MIRT465228 TRIP10 thyroid hormone receptor interactor 10 2 2
MIRT465830 TMEM64 transmembrane protein 64 2 2
MIRT466450 TFAM transcription factor A, mitochondrial 2 8
MIRT467464 SNAPIN SNAP associated protein 2 2
MIRT467490 SMIM13 small integral membrane protein 13 2 6
MIRT467890 SLC22A23 solute carrier family 22 member 23 2 2
MIRT468846 RRM2 ribonucleotide reductase regulatory subunit M2 2 2
MIRT469699 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT469853 PXK PX domain containing serine/threonine kinase like 2 8
MIRT470265 PRR14L proline rich 14 like 2 2
MIRT471136 PHF19 PHD finger protein 19 2 2
MIRT471265 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471917 NSUN4 NOP2/Sun RNA methyltransferase family member 4 2 2
MIRT472051 NPAT nuclear protein, coactivator of histone transcription 2 2
MIRT472161 NIN ninein 2 4
MIRT472339 NETO2 neuropilin and tolloid like 2 2 4
MIRT473262 MIDN midnolin 2 10
MIRT473326 MEX3A mex-3 RNA binding family member A 2 2
MIRT474868 KDM5B lysine demethylase 5B 2 2
MIRT475050 JOSD1 Josephin domain containing 1 2 2
MIRT475467 HSPA8 heat shock protein family A (Hsp70) member 8 2 6
MIRT475695 HHIPL1 HHIP like 1 2 2
MIRT476905 FBXL5 F-box and leucine rich repeat protein 5 2 12
MIRT477187 F3 coagulation factor III, tissue factor 2 8
MIRT477281 ERGIC2 ERGIC and golgi 2 2 2
MIRT478551 CTNND1 catenin delta 1 2 2
MIRT479035 COIL coilin 2 10
MIRT479059 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 8
MIRT479263 CHSY1 chondroitin sulfate synthase 1 2 2
MIRT479801 CCND1 cyclin D1 2 12
MIRT479847 CCDC86 coiled-coil domain containing 86 2 2
MIRT480522 C11orf30 EMSY, BRCA2 interacting transcriptional repressor 2 10
MIRT480556 BZW1 basic leucine zipper and W2 domains 1 2 2
MIRT481340 ATL3 atlastin GTPase 3 2 2
MIRT481960 ANKH ANKH inorganic pyrophosphate transport regulator 2 8
MIRT482135 AKAP11 A-kinase anchoring protein 11 2 12
MIRT482474 ADAR adenosine deaminase, RNA specific 2 4
MIRT484824 ZNFX1 zinc finger NFX1-type containing 1 2 2
MIRT484911 ZFYVE26 zinc finger FYVE-type containing 26 2 4
MIRT485188 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 4
MIRT485366 MYLIP myosin regulatory light chain interacting protein 2 12
MIRT488821 TBC1D28 TBC1 domain family member 28 2 2
MIRT491802 ZFYVE21 zinc finger FYVE-type containing 21 2 8
MIRT492006 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT492365 SEMA7A semaphorin 7A (John Milton Hagen blood group) 2 2
MIRT493389 KIAA0513 KIAA0513 2 6
MIRT493667 HBP1 HMG-box transcription factor 1 2 2
MIRT494068 DUSP2 dual specificity phosphatase 2 2 4
MIRT494384 SOLH calpain 15 2 2
MIRT494426 BTG2 BTG anti-proliferation factor 2 2 4
MIRT494775 ANKRD33B ankyrin repeat domain 33B 2 10
MIRT498159 FEM1C fem-1 homolog C 2 8
MIRT499904 KIAA1191 KIAA1191 2 4
MIRT500763 TMEM127 transmembrane protein 127 2 6
MIRT501460 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 8
MIRT501955 MAPRE3 microtubule associated protein RP/EB family member 3 2 8
MIRT502367 GIGYF1 GRB10 interacting GYF protein 1 2 8
MIRT502400 GATA6 GATA binding protein 6 2 8
MIRT503444 GINS4 GINS complex subunit 4 2 4
MIRT503605 ZNF780A zinc finger protein 780A 2 2
MIRT503824 TMEM242 transmembrane protein 242 2 4
MIRT504095 C9orf40 chromosome 9 open reading frame 40 2 6
MIRT505278 TUBB2A tubulin beta 2A class IIa 2 2
MIRT505489 SRSF2 serine and arginine rich splicing factor 2 2 4
MIRT505740 SEPT2 septin 2 2 4
MIRT505976 RAB11FIP1 RAB11 family interacting protein 1 2 4
MIRT506228 PFKP phosphofructokinase, platelet 2 8
MIRT506431 NAGK N-acetylglucosamine kinase 2 6
MIRT506454 NACC2 NACC family member 2 2 4
MIRT506617 MARCH6 membrane associated ring-CH-type finger 6 2 8
MIRT506838 KIF23 kinesin family member 23 2 4
MIRT506865 KIAA1147 KIAA1147 2 2
MIRT507189 FZD9 frizzled class receptor 9 2 6
MIRT507235 FOXK2 forkhead box K2 2 4
MIRT507362 FAM129A family with sequence similarity 129 member A 2 6
MIRT507942 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT508087 ANKRD52 ankyrin repeat domain 52 2 2
MIRT508134 AMD1 adenosylmethionine decarboxylase 1 2 2
MIRT511083 NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1 2 4
MIRT511257 KLHL36 kelch like family member 36 2 6
MIRT511610 HIST1H4H histone cluster 1 H4 family member h 2 2
MIRT511725 HIST1H2BF histone cluster 1 H2B family member f 2 2
MIRT512318 ACTR2 ARP2 actin related protein 2 homolog 2 6
MIRT513462 NARS asparaginyl-tRNA synthetase 2 6
MIRT513984 CEP97 centrosomal protein 97 2 2
MIRT513998 CENPQ centromere protein Q 2 4
MIRT514035 BNIP2 BCL2 interacting protein 2 2 2
MIRT514096 EPS15L1 epidermal growth factor receptor pathway substrate 15 like 1 2 6
MIRT514993 DNTTIP2 deoxynucleotidyltransferase terminal interacting protein 2 2 2
MIRT517016 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT524699 BTG3 BTG anti-proliferation factor 3 2 8
MIRT525199 ZNF93 zinc finger protein 93 2 2
MIRT527200 XIRP2 xin actin binding repeat containing 2 2 2
MIRT527469 CLEC12B C-type lectin domain family 12 member B 2 4
MIRT527888 SERF1B small EDRK-rich factor 1B 2 2
MIRT529344 SERF1A small EDRK-rich factor 1A 2 2
MIRT529493 TPD52L3 tumor protein D52 like 3 2 2
MIRT531821 ZNF264 zinc finger protein 264 2 6
MIRT531835 MTPAP mitochondrial poly(A) polymerase 2 4
MIRT532509 KCNN1 potassium calcium-activated channel subfamily N member 1 2 2
MIRT533390 U2SURP U2 snRNP associated SURP domain containing 2 6
MIRT533836 TGFBR2 transforming growth factor beta receptor 2 2 6
MIRT533876 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT534005 SUV420H1 lysine methyltransferase 5B 2 2
MIRT534626 RNASEH1 ribonuclease H1 2 4
MIRT537731 ELAVL2 ELAV like RNA binding protein 2 2 2
MIRT537781 EIF4H eukaryotic translation initiation factor 4H 2 6
MIRT538716 CAPRIN2 caprin family member 2 2 4
MIRT541088 RLIM ring finger protein, LIM domain interacting 2 2
MIRT541284 GLO1 glyoxalase I 2 2
MIRT542058 SLC25A46 solute carrier family 25 member 46 2 2
MIRT542952 GDF11 growth differentiation factor 11 2 2
MIRT543506 PLS1 plastin 1 2 2
MIRT543578 RPF2 ribosome production factor 2 homolog 2 4
MIRT545201 HIST1H2BD histone cluster 1 H2B family member d 2 2
MIRT546254 TNFRSF21 TNF receptor superfamily member 21 2 2
MIRT546293 TMEM200C transmembrane protein 200C 2 4
MIRT546457 SLC5A3 solute carrier family 5 member 3 2 4
MIRT546494 SIK1 salt inducible kinase 1 2 2
MIRT546820 RAP2C RAP2C, member of RAS oncogene family 2 2
MIRT547080 PLRG1 pleiotropic regulator 1 2 2
MIRT548228 FJX1 four jointed box 1 2 4
MIRT548338 EPHA4 EPH receptor A4 2 2
MIRT548390 ENPP5 ectonucleotide pyrophosphatase/phosphodiesterase 5 (putative) 2 4
MIRT548463 EGLN3 egl-9 family hypoxia inducible factor 3 2 2
MIRT548862 CERCAM cerebral endothelial cell adhesion molecule 2 2
MIRT549821 LUZP2 leucine zipper protein 2 2 2
MIRT550092 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT550241 PVR poliovirus receptor 2 4
MIRT551744 FMNL2 formin like 2 2 2
MIRT552203 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT552639 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT552684 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 4
MIRT553031 USP48 ubiquitin specific peptidase 48 2 2
MIRT553474 TNKS2 tankyrase 2 2 2
MIRT554329 SH3GLB1 SH3 domain containing GRB2 like, endophilin B1 2 2
MIRT554411 SCD stearoyl-CoA desaturase 2 2
MIRT554474 SAMD12 sterile alpha motif domain containing 12 2 2
MIRT554529 RUFY2 RUN and FYVE domain containing 2 2 2
MIRT554554 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 2
MIRT554611 RPS6KA5 ribosomal protein S6 kinase A5 2 2
MIRT554744 RHOC ras homolog family member C 2 2
MIRT554802 RGMB repulsive guidance molecule family member b 2 4
MIRT555165 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT555192 PRUNE2 prune homolog 2 2 2
MIRT556143 MED17 mediator complex subunit 17 2 2
MIRT556591 LEPROT leptin receptor overlapping transcript 2 2
MIRT556903 ISOC1 isochorismatase domain containing 1 2 2
MIRT557756 FRS2 fibroblast growth factor receptor substrate 2 2 2
MIRT557828 FOXJ2 forkhead box J2 2 2
MIRT558220 EFCAB14 EF-hand calcium binding domain 14 2 4
MIRT558331 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 4
MIRT558934 CBX1 chromobox 1 2 2
MIRT559078 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT559439 ARSJ arylsulfatase family member J 2 2
MIRT561376 TXNIP thioredoxin interacting protein 2 2
MIRT561644 RUNX3 runt related transcription factor 3 2 2
MIRT561741 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562214 HMGB2 high mobility group box 2 2 2
MIRT562558 CCDC71L coiled-coil domain containing 71 like 2 4
MIRT562964 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT563378 DSPP dentin sialophosphoprotein 2 2
MIRT566557 OTUD4 OTU deubiquitinase 4 2 2
MIRT566878 LRP12 LDL receptor related protein 12 2 2
MIRT567008 KLHL15 kelch like family member 15 2 2
MIRT567050 KCNB1 potassium voltage-gated channel subfamily B member 1 2 2
MIRT567112 ITGB1 integrin subunit beta 1 2 2
MIRT567542 FGFR1OP FGFR1 oncogene partner 2 2
MIRT567627 FAM210A family with sequence similarity 210 member A 2 2
MIRT567684 EIF4A2 eukaryotic translation initiation factor 4A2 2 2
MIRT567915 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT571014 CKAP2 cytoskeleton associated protein 2 2 2
MIRT571220 F2R coagulation factor II thrombin receptor 2 2
MIRT571678 RRAS2 RAS related 2 2 2
MIRT571693 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT571723 RPL17-C18orf32 RPL17-C18orf32 readthrough 2 2
MIRT571860 NKIRAS1 NFKB inhibitor interacting Ras like 1 2 2
MIRT572045 GPR137B G protein-coupled receptor 137B 2 2
MIRT572209 C18orf32 chromosome 18 open reading frame 32 2 2
MIRT573375 LIMA1 LIM domain and actin binding 1 2 2
MIRT573707 RBM12B RNA binding motif protein 12B 2 2
MIRT573915 SNAP47 synaptosome associated protein 47 2 2
MIRT574719 HAUS8 HAUS augmin like complex subunit 8 2 2
MIRT610998 BRI3BP BRI3 binding protein 2 2
MIRT615446 FAXC failed axon connections homolog 2 2
MIRT616437 FAM126B family with sequence similarity 126 member B 2 2
MIRT624424 CBX8 chromobox 8 2 2
MIRT625079 C15orf41 chromosome 15 open reading frame 41 2 2
MIRT628867 KCNE4 potassium voltage-gated channel subfamily E regulatory subunit 4 2 2
MIRT630570 SOWAHA sosondowah ankyrin repeat domain family member A 2 4
MIRT634454 PAK6 p21 (RAC1) activated kinase 6 2 2
MIRT640010 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
MIRT641800 USP32 ubiquitin specific peptidase 32 2 2
MIRT663408 SYT17 synaptotagmin 17 2 2
MIRT664793 LIAS lipoic acid synthetase 2 4
MIRT672157 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT679620 RRP36 ribosomal RNA processing 36 2 2
MIRT682524 GJD3 gap junction protein delta 3 2 2
MIRT684063 FOLR1 folate receptor 1 2 2
MIRT688711 CPS1 carbamoyl-phosphate synthase 1 2 2
MIRT691249 DFNB59 pejvakin 2 2
MIRT693152 THEM4 thioesterase superfamily member 4 2 2
MIRT693198 MKI67 marker of proliferation Ki-67 2 2
MIRT700440 PURB purine rich element binding protein B 2 2
MIRT701591 MYPN myopalladin 2 2
MIRT701966 MINK1 misshapen like kinase 1 2 2
MIRT702051 METTL21A methyltransferase like 21A 2 2
MIRT702588 JARID2 jumonji and AT-rich interaction domain containing 2 2 2
MIRT722312 DHCR24 24-dehydrocholesterol reductase 2 2
MIRT725222 PEA15 phosphoprotein enriched in astrocytes 15 2 2
MIRT755772 RAD51 RAD51 recombinase 5 1
MIRT755773 XRCC3 X-ray repair cross complementing 3 5 1
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4796-3p 5-Fluorouracil approved 3385 Microarray CNE cells 22614822 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4796-3p Erlotinib 176870 NSC718781 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-4796-3p Gefitinib 123631 NSC715055 approved sensitive High Non-Small Cell Lung Cancer tissue
hsa-miR-4796-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-4796-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-4796-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-4796-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)
hsa-miR-4796-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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