miRTarBase - #MIRT268170


—
pre-miRNA Information
pre-miRNA hsa-mir-3940   
Genomic Coordinates chr19: 6416410 - 6416511
Description Homo sapiens miR-3940 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-3940-3p
Sequence 57| CAGCCCGGAUCCCAGCCCACUU |78
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN7451488 7 COSMIC
COSN8606686 12 COSMIC
COSN26556646 17 COSMIC
COSN32052209 22 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1038465553 2 dbSNP
rs779012242 3 dbSNP
rs753266822 4 dbSNP
rs766893050 6 dbSNP
rs1436139782 7 dbSNP
rs1402099476 8 dbSNP
rs1302859978 13 dbSNP
rs759153046 16 dbSNP
rs559739712 19 dbSNP
rs187508006 20 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol POU2F1   
Synonyms OCT1, OTF1, oct-1B
Description POU class 2 homeobox 1
Transcript NM_002697   
Expression
Putative miRNA Targets on POU2F1
3'UTR of POU2F1
(miRNA target sites are highlighted)		 
>POU2F1|NM_002697|3'UTR
   1 GCTGGGCAGAGCTGGGCTGCCAGAAGCCTTTTTCACTCTGCAGTGTGATTGGACTGCCAGCCAGGTTAATAAACTGAAAA
  81 ATGTGATTGGCTTCCTCTCGCCGTGTTGTGAGGGCAAAGGAGAGAAGGGAGAAAAAAAAAAAAAAACCACACACACCCAT
 161 ACACACATACCAGAAAAAGAAAGAAAGGATGGAGACGGAACATTTGCCTAATTTTGTAATAAAACACTGTCTTTTCAGGA
 241 TTGCTTCATGGATTGGAGAACTTTCTAACCAAAAATTAAAAAAAAAAAAAAAAAAAGAAACAAAAAAATCAAAAACAAAC
 321 AAAAATAAGTGAAAGGACTACTTATCATTTCCAGCAGTCATGATGACAAGTTAAGGTGGGTTACCAATTCCAATATAGGA
 401 AGGGGATTTCTTGTTTGTCTAAATTTCTTTTTTTCTTAAAAAAAAAAAATCATTTTTATGGGTCTGTTGTACAGGCCATT
 481 AAGTCATAACAAGGTGTTTATAATCGTATCAATTGTGTTGGGGGTTCCTTTCTTAACTGGTACAATTTAGGCAGGCCTGT
 561 ATTACTGTATTATTATTGTTGTTGTTGTTATTGTTTTATATATATAGTTTGGACATGTTTATTATCTCTTGCTCCTGGAT
 641 CCTATTTCAGTGAGCTCCCACACTGTGGGGAGGGAGGGTTTTGGGGTAAGGGGAGACTTCTGTTCTTAACTGTGGGGAAT
 721 GTTCTTGCTGGTTTCCTTATCCTTGATGACTCTTACAGAGGTGCTAGAAAATTATTTTCTTTTGCCACTTATGCAAGAGG
 801 CTTGGTGCAGAAGCTGAAGGCAGTGTGTGCAAACACTCCCATTCCACACACGCCCCTTCCCCTCCCCACATCAGGTGGTG
 881 CCTTTGGAGCACTTTTGTGTAGGAAGGAATTCCTGCTGAACTGTAGCTCTCACTCACCCCCAAATCATTGAATGACCCTG
 961 AGGCCCAGTTCCTGTGGTGCAACAGTGCTGCTTTCTGCTACTTTCAATGGGAACAGCTGTACATGTTGCAGGGCAGGATT
1041 TGGTTCCCAAGAGCAAAGACTACTGCAGACACCTGACTTGGTGGTTCTCCTGATTTCTTATCTCCTGAAAAATGCTCCTG
1121 CTGTTGGTGTGTTTGTTTGTTTGTTCCATTTTGTGGAAGTTTTTCATCCAAACTTTAACTAACTTGGCAAAGAAAAAAAA
1201 CTGACTTACTGAAATTGGGAAACTTTTCCCTTCTTTTATTTTCTAAAGGAATTCTACTAGACTATTTTCCATTGATAATA
1281 TATACAAAAGAGGTGTGATGAGAAGGGTATAAGGTTACCACCTTTTCCTCTAGAGAGCCACAGACTTCCTTTCCACTGGA
1361 TGGTTTATAAATTCCTCTAACCCTGAGATTCTTCTTGGTTCTCTGACTAAAGGAGGCACTTATTAGCCGGGCTGGGATCT
1441 GTAGAACCTTTGAAGAAGGACTTTGAGCAGGAACTTTGCACACACCTTAAGTGTCTCCTTGGTTTGTTCATGATGCTCCT
1521 GCTAGGTAGGTCTAAATGGCAATACACATCTCTTTATTCAATGTAGAAAGTAATTAGCTCTGTAATTATTTTCAGGGTGT
1601 TTGTAGACTATATAAATGAGCCCATTGAAAAGGAAGAGTTTGTGAAAGTGGATGAAGAGGAATAAGGGTAACTTGGAGAT
1681 TAAATTCCTTTTTTTGTCAGTGTACTGTTGTTATGCCATCTGTACCAAAAAATTTTCCAAAAGACTGGATCACTGCAGTG
1761 CAGCTCATCTAAGTTCCCCTTCTTATTGGAGTTAAAGGTTCCCATTTGGTGGCTGTGGGTGCTTGCTTAAATCTCTGGTG
1841 GTCCCAAGACTGCACTTTTTCTCCCTTTCGAGCTGGGGATGTAGAGAGAACTTACAGGTGATTTTTATTCTGATTGCTTT
1921 TGTTTGTGTCCACAAGGGAGCTTGGATTCTGTGTACTTGTCTCTTTCCCATTGTCCAGTAAGGCAGTAAATACAGACACA
2001 ATGTGTACTTTTGTGTGTGATTCAAGTGGGAGACAGTCTGTTAAAAGGTCAGAAACATTTTAGTCCCCTTTAAAATATTT
2081 CTTTTAGTTTATTTCTATCGTGTTTTATTTCACAGATATTTAATTACCACCCCTAAATTTCCTCCTCTTACCCTTCACCT
2161 TCCCTAAAATCCTTCCAAAATCAGTGAACTGCAAGCAGGGAAACTAACAAATGTCCATTCACCCTTTTTGTGTGGTGTGT
2241 TTTTTTATGTTTTGTTTTGTTTTTTAACTAAGCTTGAACCAAAGTCAATTTTTAGCAAGCTGCTGTACTAATGGACTAGT
2321 TGATAACGTGCAGTTCAGACACATCGAGGAGATAGATGCTACTGACAATTTCTTTTTCATTTGTCTTTATTAATTTTATA
2401 TGAAAGTTGCTGCTTGTTTTTAATCTTTTATGTTGGTAAATTGTGATATCCTCTGGGCAGACATTAACTTGATGTTTAAC
2481 TAGTTTATTAGGTTGGTGTGTAAATAGAATGACAATGTCAATTACTAATTTCTCTCCTCTCCATTCACTTTTTCTCTGTT
2561 GTAGTTAAATTTAATCTTCTATCCTGACTTGACATCTCTACCTTTAGTCTGTGGAAATGATTTTAGGGCTATCAGTAATG
2641 CTGTAGCTGCCCATAATAATGAGTCCCTCCCTTGGGAGTGGTGAAACTTAGAAGGAAGGATTCAGGGAGGGAAATGCTGG
2721 TACCCAGTATACTGGATTAGAAGTTATAGCATTAATTTCTCAAAATTGCTACCAAAGGAAGTGTGGAGTCCCAAGGGACT
2801 CAAGCTCAGTGAGGTAAGACAAAGGGCAAGGAAAGGCTGTTTGGGTGGTTTTTTTTTCCCCACATATGGTTTAGAAAATG
2881 ATCCCTTTCCCAAACAAAACTCACCAACAGACTTTAATATTAGAAAAGATACTAAGCTTTAAATGTCAATACAGTGGTCT
2961 TTTATTCCCTGCCCTGTCTATATTTTCTACTCAATTTGGGATAAGGGGATTTTATGTGAAGCACTTGATGAGGGTAGACC
3041 AGCATAAAAAATCTGTTTAAAAGAAGAAATAATCTTTAGGAAAAGATAAATCTTTAGATAAAAATAAATTTTTTTCTCTT
3121 TTTTTACTTATTTAAAAATAAGTTGTGAAATGAAAGGTACATTTACACATGTACACACGAAACACTAATATAGCTTTTTG
3201 GTGGTTGTTTAGTTTAAAATCAACTCCCTATCCATCATCCCTAGATATTCTACTTATCGTATTGCTTCATGAACACCTTA
3281 GTCATTTTTTACTTTACGTATATATTTTTTTATCATCTCAAGAAATGCATTTTGAATTGAATGAACTATCTTCTAAGCTA
3361 AGATACTCAAATTTAACTTTTAGCCACCTTATATGGGAGAGCCTGGAAACTAAAGGGGACCAGGGACCATTTGACCAAAA
3441 GAGGTGTTTGGTGGAGTTTCTGCATTTCAAAGAAGAAAGGCCAGATAGGTCATCACAATTCATTGTATTATTCTTTTTTT
3521 TTCCCCTTAATGTTTATGCAAATTTTATTTTATATTTCTGAATTTGGTTAGCACATACTAAGCCAAAGACTATTCTAAAT
3601 GCATTTATAGTGAATACTATGTATGCCCATGGTAATGGGTCCTCCCTAAGGAGTGGTGAATGTAATTGTGTGAATCCTGC
3681 TTATCACAAGTGGTGCAATTTGGTCATAAACTTTATTTATACCCTGTATACATCTGAATAACAGAGCAGAAAGACCTAAA
3761 AAAGGGCTTCTCACAGGAACAATATTACTATGTTGTTCTAAGAAAAAATAAGTTGAGTGCTGTATTAGTTTAAGTGTTTC
3841 TAAAGTTCTATAGGCAGCATTTTAGAATTAAGAATTGTGTATATCCATTAACTGATATAATTCACATGTCCTTTTATTTG
3921 TTATCAGAAAGATCAATACTATCCCAATTTATTCAACTTGTTACCCAAGAAATGGAACCAAAGGAATCCAACTTTCATTT
4001 TGTGTAGAATCATACCTACTTATACTTAATGCTAGCACTGTAAGAAATAAGTCTTTTTTGTTTAAAAAAGGGAAGATAAG
4081 ATTAAAGATTCTTAGTGAGATCATCTTGCCAATTTGTTGTACATCTCTCATTCATTGTTGGGGGAAAAAAAAGCACAACT
4161 ATACCTCTTTAATGTTATTTTCTTCCATTATCCCTCATTTATTTGGAAAGATAAGGGAAACCTTGTCTGTATTATCCAGA
4241 AGCACAGATATTTGCTTGACACAATATTTAAATTCAGCCCAATCTTTAACATTAAAAAATTTTCTTTTTAACTTGCTGGA
4321 AAAGTTGGATACATTGGCAAATATAGGGAATTCATGTCTTTTTTTTTTTTTTTTTTCTGGTCTTGCTCTGTTGCCTAGGC
4401 TAGAGTGCAACGGCATGATCTCGGCTCACTGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGCTTCAGCCTCCCAA
4481 GTAGCTGGGATTACAGGCGCCCACCACCGCACCCGGCTAATTTTTGTATTTTTAGTAGGGACGGGATTTCTCCGTGTTGG
4561 CCAGGCTTTTTGAACTCCTGACCTTAGGTGATCTGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCAC
4641 TGTGCCCATCCTCATGTCAATTTTTAAAGTGATAAATCCTGATATTATACATTGCAATTAGTGTAGAATAAACGCTTGGC
4721 TTATAGAACTCTCTGTTCTTAGTCTAAAGCTGTTCCCAAACCAGGTCATCCTCACGAAACATTCTTGACCAAGAAAAAAG
4801 ATAAGGTCATTGAGATAGGAAGACAGAGGAAAAGCCTCTTGCTGTTGTTTCTTCCCAAGAAAGGAGAAGCCCTGCCAGGG
4881 AGAAGTCAGTAGTATTGCTGACTCACTGTATCACTGAGTGTAGGGTGTGGTAGCAAGGAGGAGGCAGGGGATTCACGCTG
4961 ACAGGTGGCTCTGGCCTGGCTCTTGGGGGGCCTTCTGAAGACCAGTCTGCAGTTTGAGGAAGGGCCCCAACAATTCATTT
5041 GGAGAGCTTGGCCAAATACTTTCTCATTAAATCAGCACCTAAACTTGATGAACTTAAAGTTTGTTTATTAGAGTTGAAAA
5121 CATTAAAAGATGACTGATACTAATGGGAGAAAAATACTAAAGACCCAAAATTTAAAATTTTCCAAAATGGACAAGAATTG
5201 ATGGGTTAATTTGCTCATAACTGATATGAGTTTGCTTTTATGTGTGTGTGGAAAGCATTTAATGTGTGATGCTGTTCATA
5281 GTCCTGGCTATTTGATGTCATTTTCAGTTTTACAACATTTTGAGGATGACACTTTATAAAATGGTAAATCTTTCTCAGCG
5361 TTTACAAACTTGGCTTTTGAGAAGGGAAAAATCCTCTTTGCTATTTCTGTAAGAAGAATAACTGAGATCAGCTATTATAT
5441 AGGTTTGCATGGATGGTGTCCACAATACAAATGTAAACTTGGACAGGAATAGGATAAATAAATTGCTTTCATCATAAAGG
5521 CCAATCATCCATTTCTTAGTCCAAGGAGATTAAATATAAATAGGACACCCCTGAGATTTCCAGTAAGGTATTTGAAAGGA
5601 TTCCACTGGGAGGGCAGGGAATATATTTTTTCTCAGAGCATCCAGTTTGTACCCAGTTTTCTATATGGTTTGTGAACTGT
5681 AGCTTTTAAAAAAAAATTTTGTAGTTTTCTTCTAACCTTATTCATTAAGTAGTTCCTTGTTTTGGCCCTTCTACTCTTGG
5761 CCTTAGCTAAAAGCAGTAAATGTGAGTGAATTTTATGTTGATTATGTCACCTGGATCTCCTTTCCTTCCCTTCTTTTTCT
5841 CATTGAATGGTGGTACCTTAATTTGGGTAACAGCTAGCTTCTGGCACCTTCATAAAATACCTCAGAATAGCTTAGCATTG
5921 TTGCAAAACTGGTTTTAAACTAAAAACCAAATAAATAAGTGAAAAAATTTTATAAATAGTGGAAATAATTCTAGCTGTAG
6001 CATTTAGTTGAACTAATGTTTATTATGATCGATAAACAAGATTGATGCTGTATGTATTTGGGATCCTGTTTATAGGTTAC
6081 AATTTATAGGGTTAGGGAGGGTTGGGTGGGGGAAGAGGAGATGTTGATTATGTTAGAAGGAAAACATTGCTCGTGTGTGT
6161 GTTTGTTTTTTCTTATATCTGTCTTGCCAAAGGAAACTTGATTTTCCCTGTGATTGGCTTTGGCCTCTGTGGTCTGGTCT
6241 GCAGCAGTGTGTGGTGGCATGCAGGTAACATATGGGGTGTCCAGTAGGTTCAGGGACCCTGAGGGTGCATTTACATCCCT
6321 TCCTATGGTTGCCCATGCCCCCCAGACCCTGCCAACCTCTCCTAATGATTCATTACCTCTGTACATAGCAAAAGCATAGG
6401 CAAAGGATGAATGCGTGAATGCCTGGATGTGCAGTTGAGAAACAGAGGCAGACATAGACATGCACCAATTAATTTGGAGC
6481 CAAGAGGTGAGTGATTGATGTATCTTAAATCTAGGAAAGTTAAAGTGAAACAGGTTCTTTGTGTTGCCCTCTGTCAAGTT
6561 ACTGAATGTTGTGCTAATAACACAACACTTTAAAACCTTACTTACTTTTCTCATACCAAGGCTAGTTCTTTCTAGACCAA
6641 AAACACAAACAGGATAAAAAGCAAACCAAGAAGTTGAAAGCTAACCTGCCCACCTCACCCCTGTGATACAAAGTGTGAAC
6721 CTTAAGGATTAGTTGGTGGGATTGAGGAGAGAATTATTCTTGGTGGGAACATGAATGAGAAATGATGCTGGCTTAGGAAA
6801 AATCACAAGCCCTTTCTGCCCATACTCTGGGACAAACTTTCTTGGCTCCCTGAGTTCGGATATAGACTGTATCTCTAGAA
6881 AGGCTATTTTTTTAAATAAATGATCCCACAGAACTTAAGTGGGATTTGGTTTAGATACCAAAGACACTGCTAATGTCATT
6961 GCTTATCCTTAAGTTTTCAAAACAGGCAGAGGGAATAGGAGCAAAAAGCCAAAATTTGGAAAAGCTTTACTTTATCTCTT
7041 TCCTTCCCTTTTCCCCTTTTCCCAGTCCCCTGCTTTTTGAAGGAAGTCTTCTTGGTTATCCTGGCTTTGGAAAAGAGATT
7121 TATTTTGTTTTGCTCTGCTGGCTCTTTAAAGATGGATAGTTGCTCAATCTAGCAGTGATGTTCTTGGAATTGCTGAGAAA
7201 TTTGGGGAGGGCAAAAGATAGGGGTAGAATTTTTTCATTATTTCCCTTTATCTAATACTTTTAAATAGAACCAACACAGC
7281 CTATATGAGTTCAGACAATATTTAGATGTGGTATCTCCATCTGTCTCCTGTAAAAGATAAGAATTTTCAAGAACAGGATT
7361 ACGTGGAAAACCAAAAGATCTTCCCTTACTCTCCTATAAATGTTTTGTTCCAAATGTTTTTATATATGGGCTCTAGGGAG
7441 TCAGGTAGTTCATTGTTTCGGTGTACTATTGATAGGACACAGAAAGGGAGAGAGGGTAAAGAAATGTATCACTCTCTGAA
7521 TATTGCATCAAAAATGATTAGGTTGCAGAACTTCATGAAAGCTTTACTAATAATCTTATTGTTCTGACATTATGTAAAGG
7601 TGGTATTAATATTGTATGACTTGTCAAAGTGCTAGATAGGTTTATAAGTAGGTAATAGGGATGTTGAAGATTAGAGCACT
7681 TGAAACAGAAGTTCTGGGAAAACAAGGTGTGTGTAATGGAACACCACTTTGAGCACAGAAACAAAGGTCCCTTGGACCTG
7761 GTAGGGAAGATGTGATTTATGATTGTTTCTGTGTCCCTGTATCTGCCCACCCTGCACAGGGCTCCACCACCCAGGGCCAC
7841 CTTCTGGTTTAAACCCAGGACACTGTCAAAAAGTTAAGACCCCAAAACTAATTTACTGTAAAAAACATTGAGGACTGCTG
7921 CAAAGTTTTCCCTTGTTTTCTTTGTGTACTTGTTCATCATTGTATAAGTTAGCCACAGCTTCACAAGAGCAGCTTAAGGC
8001 TTCTTTCATAAATTGGCAGTGGCATTGAGTTCTCAAACATTATATCCCAAAGTCTGCAGGCAGACAGCTGGATACAGCGC
8081 TGTGTATAAATGAGACGTCCAAACACTTGAGTTTCTTAAGATTGGGATCTCTTTCAAATGAAAAAGGACAGAGCCAAGTA
8161 GAGAAAAGACTTTGTGCTCCCACCCAGCCTTAATGAGTCTCATGGTCTAAAAGTATAGGAAGAAATGAAATGCACTTTCA
8241 GAAGCTAAAATGACAGTGTCTGCTACAAAAGGCTGTAGTTGTAGGCAGTCGGGGATGCCATGTCCTTGGTTCCATTCCTG
8321 CGTGAGTCTGCAGAAGGCACACACTTTGTAAGAGTAGAGTGGACTAGTGCCAGCCTGAATAGGTTTAAAACTGCAAACAG
8401 TTGGAGAACATGGAACAGGTTGGTGCAGGAAGCCTAAGATTTTGCAATCATATTATAACATTGGCTTTTGACAACATAAA
8481 TGTTGTATCTTCCCTAAGGTCAGGTCGGGGAAAGAAAGACTTCCAGCTTCTTACCTCTGCGTGCATGGGCACGTGTGCAT
8561 TGCTCAGTCCGCAGGAGGTCTCACTCCGCAGGAAACGCTCTCCTCCCGCATAAGTCTGTACTTCCATCCCCTCATCTGTG
8641 GTAGTAGTGAAGGCTAGGTGAGTAAGCGTGGGCTGTTCTACCCACCAGAAGTCCAGGAGCTGTTGTATACCTCATTTCTA
8721 ACTCGTGACCGAGTGACTTGCTTTAACTTTCTCGAAATCCTACAGAGTTGCCAAGTCTGCCCTCCCTCCTCAGTCATGTT
8801 AAACTCTGGCCTATAGCATCATGGGACCTGTAGCCTAGGGTGGGACCCCCTAAAGCCTCTGAATGTCGCTGCTTAAAAGC
8881 TACTGCAAACTGAGGGCAAATTGCAATCTTCTATTCCTTTTTGTTGCAAGGGGTCTTCACAGGTCTCTTAACATCTGCTT
8961 TCCCTGCCACCCTGCCTTTAGGGGCTGGCCAGCTATCCACACCCCTAACCCACCCTGTGTTTCTGACAGCTGGCCACACG
9041 TCAACTTCTGTACTTGCCTTTTCCTTGGTGGGGTAGAGGCCAACCCCTTCTCCTCTGAGGCCTCAGGGTTCTGTTTCTTT
9121 TCAGGACTTTGGGTAGAAGGGAAGACACCAAAGGCTCCTTTAAGCTGACTGCTGCATACACATTTCACTTTTTTTCCTTT
9201 GACATGACCAAAAATATCCAAATATTTAAGTTTATTATTATTATTATTATTATTTGACAATCTTATATCCAATGGGCTCT
9281 CTAGAAGCTGCATCCCCAGCCCTTTCACCTTTTCTTTGAATGTAGTTCCCAACCTTCAATTCCCACCCCTAATGCTGACA
9361 AAAAGCTTAGCCAGGTCATGATACTGCTGCTATAAGCCAGGGGAGGGTGGTTTCTTTGTTTTGTTTTGTTTTGTTTTGTT
9441 TTTCAAATTTCCAGCCAAAACCAAAGATTTCTTAATGATTGTATAAACTCAAAACAAACAAAAGAACCAAAGAAAAGGGA
9521 AGTCTTCAGCATCAGTCCAGTCTGTGGTGTCCTGGCACTTAGAAGAGTGAGGCCAGGGAAGGTGGGGCGGGGGGACCCTC
9601 TGACTGGATCAGAAAGGGCAGGCAAGCTGCTTACCACCTTCCAGGGTCCAGCACAGGTGCATGCCCCTAGCTTTGGCCCT
9681 CACAAACTTGTGAGCATGCCCTGAAACAAATTGGCATTTCAGATTTTCCAAAACAAAAGTCAAAAAACCCCATCACCACC
9761 ATCATCCACCCTACACCAACCAGGGTCACTATGGGGACTTAGCACAGGGCCTAGGGAGGGTGGGAGCTGCTGCTGGACTG
9841 GCCCGAGGACTCCACAGAGTGGGGGACGTTGAAGACACTGGCGCACGATTGGCTGCTCTGCTGGGTGCTTTAACCTCTGG
9921 GGCTGGGCGAATGCACGCCACGGTGCCCTTCTGAGCCTTTTTTTCTTTTCCTGTACTGGAACTGCTTGGAAGTGGCTGTC
10001 CTGTTTGTGAGAAAACATGCAGAAAGATTATCAAGCTTTTCATTTCTCTTTATTGTAGTTTTCTTTCCTTTTTGCAGCAC
10081 CACTGTGCAACTATGCATTGTACTTCACAACCTTTTGTGCTAGGTAGATGCCTGTGACTTTTTAACTTGGGGGGTGGGGG
10161 GATTGCAAATGAAGGAACTTTTTACATGGATCTTTTTAATCTCAGTTGGTTGGGGGAGGGGGGTACTTGGTTCTTGGGTC
10241 ACACAAGCTCTATCCCAAAGCAAAATCCAAATGTTAATAATATTAGCCTGATGCAGATACCAAAGATAATTTCTTTCCTG
10321 CAGAACCTTAGACTCGTGTATTAAGTACGATTACCCAGCACTTGCATTAGTCTAACCTCAGTAATTCCAAAGCTTAGATG
10401 TATATTTTGGTATATTTCTGGGATATTAAAAAAAAAATGTCGTTTAACTTCTTGTTTGTTTCAGTGTAATGCTCTTAAAG
10481 TCATAGCATGAAAATAATTGAACTGTCCTATTCTTAGTAGTTTGAAATAATAGTATTTTTGTATGTTTTGGGTGTGTCTA
10561 TGTATGTATTAACATAACAGTTTTCACTGCCTAGGTGTTCATAATAAAAAAGAAAATGAAAAAAGTTCTGAGTGTACATA
10641 ATATTCAATAATAATCTCCCACCAGGTGTCAATTTAGATTGCATATTCCTCATTACTGTTCCCAACTGGGATTTTGTTTT
10721 CTTTTAAAGAGACAGTGATCGTGTTTTTCTAAAGATGTTTTCTTTCTCTCTTTCAATATCTTAACTCACTTTTTTTTTCT
10801 TCCTTTTTTGTCTTAATTATTAATTCAGGGGTGTTTGTCCACTGTTGTCAAAGGAGGGGCACAAGGGGAATTGGCCCCCG
10881 GCCTCCTAGAACTTTTTGTTTTATGTACTTTAAAATGTGAGTTTGAGTTCTTCTTTGTGGAAACTTAAGATGTGGTGTAA
10961 ATGATTCTTTCCAAAATTGTCCAGCAGCTTGAATGAGGCAGTGACAATTCTGAGGTGGTTTATTGGGAGTCCTTCTACAT
11041 TTCTCTTAGATAACTCTGCACTCTGGGTGGCTATTGTGTAGCCTTACTGCCCCAGAGTGCCTGTTAGCCAAATATTTCCC
11121 CTCTGATAGGAATATTTTCTAAGAATCAGCTGATAACTTGCGTGCTGGACCTTGTTATCTGTGCCCCTGGGAGACACACG
11201 TTTTCTTGGTTTTGAAAACCTGAAACACAGGCAACTTTACATTTTGGGGAATTAGCTGATGCCTCCTGAAGCCTGAGGAG
11281 GTGGCGGGGAATATGAGCGGTGCTGTCTCTCTCAAAAGTGCCCTTTAGATGATTCCCCCTCCTAGGGCTGCCTGCAGGGG
11361 CTGTAGGCTTGGGAAAGATTGTGTAGGTGACAGTGAATCAGAATGAAGTGGTAGATTTTGTGTAGATGCATTTGTCTGCT
11441 GTAATTTTTTATATATATATTAAACTTACTGTAACTGTACAGTTCATTTCTGTTGTAAAACATCATTAAACCATCTTCCA
11521 AGTGTTTTCACATTG
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uucaccCGACC---CUAGGCCCGAc 5'
                |||||   || |:||||| 
Target 5' ------GCTGGGCAGAGCTGGGCTg 3'
 1 - 19 144.00 -24.60
2 
miRNA  3' uucacccgacccUAGGCCCGAc 5'
                      | ||||||| 
Target 5' gaggcacttattAGCCGGGCTg 3'
 1413 - 1434 142.00 -19.76
3 
miRNA  3' uucacccGACCCUAGGCCCGAc 5'
                 |||    |||||:| 
Target 5' gcaacctCTGCCTCCCGGGTTc 3'
 4431 - 4452 127.00 -13.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30505256 29 COSMIC
COSN30516726 29 COSMIC
COSN26989948 30 COSMIC
COSN30145008 34 COSMIC
COSN19081022 72 COSMIC
COSN31530943 74 COSMIC
COSN30515569 87 COSMIC
COSN30498219 101 COSMIC
COSN23961587 116 COSMIC
COSN20095543 147 COSMIC
COSN31530948 147 COSMIC
COSN32062216 147 COSMIC
COSN26886063 160 COSMIC
COSN31545804 167 COSMIC
COSN21967109 180 COSMIC
COSN30107286 190 COSMIC
COSN30116847 214 COSMIC
COSN30116863 216 COSMIC
COSN30116853 217 COSMIC
COSM8901507 245 COSMIC
COSM9852992 257 COSMIC
COSM6287789 271 COSMIC
COSM4142991 277 COSMIC
COSM4142992 279 COSMIC
COSN30677045 286 COSMIC
COSN31561991 292 COSMIC
COSN31481497 293 COSMIC
COSM4593051 296 COSMIC
COSM4589973 297 COSMIC
COSN15663717 298 COSMIC
COSN20052424 298 COSMIC
COSN20068266 298 COSMIC
COSN19661919 302 COSMIC
COSN28195937 310 COSMIC
COSN8648489 380 COSMIC
COSN1091736 383 COSMIC
COSN30722951 449 COSMIC
COSN27465437 450 COSMIC
COSN1091737 564 COSMIC
COSN28201728 854 COSMIC
COSN15829847 1283 COSMIC
COSN21209730 1301 COSMIC
COSN155028 1382 COSMIC
COSN20744552 1545 COSMIC
COSN16467564 1659 COSMIC
COSN20937854 1737 COSMIC
COSN5357103 1789 COSMIC
COSN24460329 2179 COSMIC
COSN21025510 2706 COSMIC
COSN27205000 2858 COSMIC
COSN5357104 2979 COSMIC
COSN27442835 3052 COSMIC
COSN6508563 3438 COSMIC
COSN6007231 3791 COSMIC
COSN32124529 4126 COSMIC
COSN22976376 4146 COSMIC
COSN21502257 4211 COSMIC
COSN32063147 4377 COSMIC
COSN19224661 4867 COSMIC
COSN22829791 5349 COSMIC
COSN28198004 5440 COSMIC
COSN27777899 5480 COSMIC
COSN1411805 5609 COSMIC
COSN20168628 5959 COSMIC
COSN8648491 6108 COSMIC
COSN5733375 6369 COSMIC
COSN21266402 6778 COSMIC
COSN15698443 6820 COSMIC
COSN8648492 6855 COSMIC
COSN16717844 7269 COSMIC
COSN26685360 7473 COSMIC
COSN4744644 7725 COSMIC
COSN17907270 8279 COSMIC
COSN19383959 8383 COSMIC
COSN15005408 8554 COSMIC
COSN8321780 8781 COSMIC
COSN25077114 9239 COSMIC
COSN27406675 9255 COSMIC
COSN29893594 9614 COSMIC
COSN21434009 9796 COSMIC
COSN9365589 9984 COSMIC
COSN6007233 10200 COSMIC
COSN14442223 10380 COSMIC
COSN16147077 10640 COSMIC
COSN29850083 11259 COSMIC
COSN7182957 11272 COSMIC
rs552304070 10429 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1029816046 4 dbSNP
rs1383710848 5 dbSNP
rs1423993829 7 dbSNP
rs763960542 7 dbSNP
rs753823130 13 dbSNP
rs1026429113 14 dbSNP
rs34206998 16 dbSNP
rs566679670 16 dbSNP
rs74119502 17 dbSNP
rs74121903 18 dbSNP
rs758058303 19 dbSNP
rs1228731368 21 dbSNP
rs778300514 22 dbSNP
rs370071032 27 dbSNP
rs751061891 28 dbSNP
rs1212598565 29 dbSNP
rs374454199 29 dbSNP
rs1273412560 37 dbSNP
rs12140508 39 dbSNP
rs1469485975 46 dbSNP
rs754458248 48 dbSNP
rs367761426 50 dbSNP
rs538342590 56 dbSNP
rs770763302 59 dbSNP
rs1315094078 61 dbSNP
rs1213099749 64 dbSNP
rs1361280962 83 dbSNP
rs1298899695 85 dbSNP
rs556652647 88 dbSNP
rs945495508 93 dbSNP
rs1059761 98 dbSNP
rs147488593 100 dbSNP
rs192681274 101 dbSNP
rs1338157206 103 dbSNP
rs935892511 103 dbSNP
rs1427566751 104 dbSNP
rs1423657829 105 dbSNP
rs1195249533 107 dbSNP
rs1479192467 111 dbSNP
rs1268067165 115 dbSNP
rs1210419313 116 dbSNP
rs1489337708 119 dbSNP
rs1243672270 125 dbSNP
rs1270428326 127 dbSNP
rs1340983797 129 dbSNP
rs1202626227 130 dbSNP
rs1249409214 130 dbSNP
rs1225908466 131 dbSNP
rs1387931309 132 dbSNP
rs199706857 132 dbSNP
rs35216157 132 dbSNP
rs398053500 132 dbSNP
rs878864773 132 dbSNP
rs879244934 132 dbSNP
rs572687241 133 dbSNP
rs397754703 147 dbSNP
rs888925464 147 dbSNP
rs878885661 148 dbSNP
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rs1172243813 1055 dbSNP
rs539121260 1062 dbSNP
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rs1482982402 1067 dbSNP
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rs12077940 1089 dbSNP
rs1176985822 1094 dbSNP
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rs755305417 1101 dbSNP
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rs1390226542 1402 dbSNP
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rs770761911 1414 dbSNP
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rs1315523985 1452 dbSNP
rs1256926430 1465 dbSNP
rs902752167 1483 dbSNP
rs1341343131 1496 dbSNP
rs1302281596 1499 dbSNP
rs1435419441 1503 dbSNP
rs930209252 1505 dbSNP
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rs115087440 1513 dbSNP
rs1443453758 1519 dbSNP
rs1295918573 1522 dbSNP
rs1170113186 1533 dbSNP
rs907359499 1534 dbSNP
rs1002983813 1540 dbSNP
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rs1422205680 1549 dbSNP
rs1171347161 1562 dbSNP
rs549020960 1563 dbSNP
rs1378640721 1564 dbSNP
rs116709087 1568 dbSNP
rs894525057 1577 dbSNP
rs1456203002 1581 dbSNP
rs1011993104 1590 dbSNP
rs1281381446 1608 dbSNP
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rs371073213 1610 dbSNP
rs1021622059 1611 dbSNP
rs1254886699 1622 dbSNP
rs2995083 1623 dbSNP
rs1190075913 1627 dbSNP
rs1236730180 1655 dbSNP
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rs1030144391 1660 dbSNP
rs954562057 1664 dbSNP
rs1330958535 1669 dbSNP
rs1448665325 1680 dbSNP
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rs1332763152 1683 dbSNP
rs1330605512 1689 dbSNP
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rs2949660 1690 dbSNP
rs1412674804 1696 dbSNP
rs763084761 1699 dbSNP
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rs1175535230 1706 dbSNP
rs756585325 1706 dbSNP
rs950688070 1711 dbSNP
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rs909007475 1716 dbSNP
rs941889627 1718 dbSNP
rs990508088 1723 dbSNP
rs1437365995 1726 dbSNP
rs916313560 1733 dbSNP
rs571661781 1734 dbSNP
rs1214116073 1742 dbSNP
rs963121160 1743 dbSNP
rs973517477 1748 dbSNP
rs190577665 1763 dbSNP
rs1364682163 1765 dbSNP
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rs930243481 1768 dbSNP
rs1276911158 1791 dbSNP
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rs1366183726 1795 dbSNP
rs1375601800 1798 dbSNP
rs1219150069 1800 dbSNP
rs1300038877 1805 dbSNP
rs1447435309 1812 dbSNP
rs1376547136 1813 dbSNP
rs1315376596 1815 dbSNP
rs1329210831 1828 dbSNP
rs1360365981 1836 dbSNP
rs1210003720 1839 dbSNP
rs1402137055 1840 dbSNP
rs1410948580 1840 dbSNP
rs1180730521 1855 dbSNP
rs935542639 1858 dbSNP
rs1054055234 1859 dbSNP
rs1191419346 1866 dbSNP
rs1047329106 1870 dbSNP
rs180813142 1871 dbSNP
rs1216738209 1878 dbSNP
rs547823567 1880 dbSNP
rs1007044364 1889 dbSNP
rs1018482275 1895 dbSNP
rs1295651431 1902 dbSNP
rs938845395 1908 dbSNP
rs566151800 1923 dbSNP
rs148664292 1926 dbSNP
rs751758443 1928 dbSNP
rs558587816 1937 dbSNP
rs576361819 1939 dbSNP
rs1461444394 1941 dbSNP
rs1419470267 1942 dbSNP
rs1477023641 1945 dbSNP
rs1477481193 1946 dbSNP
rs573174964 1959 dbSNP
rs1262385173 1961 dbSNP
rs1187999502 1962 dbSNP
rs998787993 1981 dbSNP
rs1030217866 1984 dbSNP
rs1245136669 1986 dbSNP
rs1190533663 1989 dbSNP
rs890338789 1990 dbSNP
rs1275181551 1991 dbSNP
rs1473633723 1996 dbSNP
rs755358860 1998 dbSNP
rs1365934643 2002 dbSNP
rs983747126 2002 dbSNP
rs767828959 2006 dbSNP
rs1292574659 2009 dbSNP
rs1441248808 2011 dbSNP
rs1016202487 2013 dbSNP
rs537337976 2020 dbSNP
rs1328732753 2027 dbSNP
rs1464670960 2035 dbSNP
rs1373518482 2039 dbSNP
rs1406156418 2049 dbSNP
rs1172455987 2074 dbSNP
rs1431228477 2075 dbSNP
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rs555786900 2082 dbSNP
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rs1017436049 2088 dbSNP
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rs1457379476 2099 dbSNP
rs990600991 2100 dbSNP
rs963493643 2101 dbSNP
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rs1310790632 2113 dbSNP
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rs1234527677 2138 dbSNP
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rs894483962 2990 dbSNP
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rs1003352012 3316 dbSNP
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rs1022375581 3351 dbSNP
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rs1045738189 3375 dbSNP
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rs1238557568 3394 dbSNP
rs1156945281 3395 dbSNP
rs1266451412 3400 dbSNP
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