miRTarBase - #MIRT271874


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pre-miRNA Information
pre-miRNA hsa-mir-548s   
Genomic Coordinates chr2: 11767444 - 11767525
Description Homo sapiens miR-548s stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-548s
Sequence 52| AUGGCCAAAACUGCAGUUAUUUU |74
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 2 + 11767495 29233923 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1187825186 1 dbSNP
rs1161985266 4 dbSNP
rs1476642595 6 dbSNP
rs772377981 6 dbSNP
rs1427306684 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF678   
Synonyms -
Description zinc finger protein 678
Transcript NM_178549   
Expression
Putative miRNA Targets on ZNF678
3'UTR of ZNF678
(miRNA target sites are highlighted)		 
>ZNF678|NM_178549|3'UTR
   1 AAACTGCTTCATTATACATGGCTTCACTAATTTCATACTGAATAAAAGTGGTATGAGCATAATGACTGTTTAAGGATGTT
  81 TCACAAAATGTAAGCTTCAGAGTGCACAACACTATACTGAATGAAATTTATAAATATAAAAGATTACAATATCTTTATTT
 161 CAAAGATCTTCCTGTAAACAGAATCTGTACTAGAGGAAAAACCCTTAAACAATTATTCAGACTTTATTCAACTTTAGAGG
 241 ATTTTACGGGGGCAAAAAACCTCCTACAAATGTGGAAAAACATTTTTTCAAGATATATGCCTTAGAAAACACCAGAGTTT
 321 ATAGTATAGTAGAATATATTTTACAGATACAGTGAATACAAACAAATGTCCAAAATTAAGTCTAAATAAAACATTACATA
 401 ATTTACTGTAGAAAGTACTAAGGCACTAACAGTTTCAGATGTTACTTTAAAGCAGTGTTGATTGTCGAGAATAATTCAAA
 481 GTTAAAATAGATAATTTAGTTGTATGTAAATTTAAATGAATCAAGAGATGATGTCTTTTTGAAGCACAGTTACATTCATG
 561 TTATACTTTTTTGCATTAAAAGTTTTTATATTTTTGATTATATATTTTAATATTGATATAATTCATATCTCAAATAACTT
 641 GATTTTTATTATATTTATTGTTTATGTTAAAGTATGTGGTCAGTTGTTGCTGCATAAGAGCTATGAGAAGTTCTTCTATA
 721 TTAGATGACCATCATTTATATGCTTTTTCATGAATGATTAAGGGCACCGAAATGTAACATTTATAAGGAAAATCTAAGTA
 801 GAAATGCTTTTTGTTGATGTATAACAGTGTTTTAAGTAACACATTAGGTATTCAGAGAAGTATTTTGCATTATAGTAATA
 881 GGGAAACATTTTGAATTTCAGTAGTAAATTGTTTTATGAGTTGCACATTAAGATAATACAGTAGCTTTTGAAATGTTATT
 961 TTTAGAATGCAATTTCTTTTCATAAAACAAAATTATTTTTAATGTGTTAAGAATATTTTGCATTGAATGAAGTATATCTT
1041 GCCACAATAATTAACCTATACCACCTTACCCAAAGTTGTAGGTAACAGATAGTAACAATACACTACTGGGTAACAGTGAA
1121 AGGACACCTCTAGTAATCTCTTTTCCCAGTGGCTTTTAATTTCAAACAACTTGGGGAGGTTTTTTTTATGTGATATGCTT
1201 TGGTTTTTTTGTGCCTTACCTCATGTTGAAATGTGTTCCCCCATGTTGGAGGCGGGGTCTAGTGGAAGGTGTTTAGGTCA
1281 TGGGTGTAGATTACTCATGAATGGATTGGTGTTCTTACCACTGCAGTTAGTGTGTTCTCTGTTAGTTCATGTGAAAGCTG
1361 GTTGTTAAAAACAAAAACAAACAAACAAAAAACTGATATTCCTCTTGCTTTGTCTTTTGCCATGATACCCCTTTGCCTTT
1441 TATTATGCATAAAAGCTTCCTGAGGCCTCATCAGAAGTTAAGCAGATGTTGATGTCATGCTTGTATAGCCAACAGAACTG
1521 AGGCTAATAAACCTCTTTTCTGTATTAATTTGCCAGTGTTAAGTATTCCCTTCTAGCAGCACAAAATGGACTAACATCCC
1601 ATAGGTTATATTTTTATTTTTTTCTTTTGTAAATACTGGACAATGATACTCTTATATAATCTTCAGTATAACCATTATAA
1681 TTGCCCACTATAAAGGAGTATAATGAAAGGCCATGTATTTTGAATCACGAATGACTATTTACAAAATGTCATACTACGTT
1761 TTTCTTTGAGCCTGTGACCCCTCTGGCCTGTAAAAACACATACATACATTTAGTTTTGATTAACATGGAGTTAATTTTAT
1841 AAGTCTGTCACTCTAAACATAAGTGTTAGCTTTAAGAGAATTACAGAGCATGTAATTGTGTTTGAGTGTAGGTGTGTACT
1921 TTTTTGAGAAGAAAACAAAAATATTGGAACAAAATATAATTTAAAAAGTATTGGTAATTTACTAGCAAACTAGGAATCTC
2001 AAAGATTCTGAAAGTAAATATTTATTCTCTGCTTTGTATTGAATTTACTTCTGTAAAATCTTATGGCTGCTGGCTCAGAA
2081 TCTTCTCATGCAAATCCTGTTTTTTTCTTGTCTGTTGATCATACTAAACCTAATGTATAGTTTTCTCATTCCAAAGTTCA
2161 TGAAATTTTCTCTATATTCCTGAGAAATTCTAAGAATAACTTTCATAAAATGTATTGATGTTCACAAGATAATTTTAAGA
2241 TGTAATTCTACAATATGTGTGTTACTACATTTTATTTAATTAGTATATTTTATTTTTGTATTTCAATTGGAGAACCCTAT
2321 TTTGGCCAATTTTTACTTGGTTTTTGTTTCCATTTTAATATTTTACATAATTGAATTTTTTTCACTTTATTGAGCCATTT
2401 TGTTTAGATGTACACTGGGAAGGCTTCATAATTCACAAAGTTGTTTTGACATATAAATGAGGTGAACAAACACAGGAAAG
2481 TGCTAGGTTTCCTGGGGGTATAATAGATGCTCTATAATTAGCAGTAAATATTCTTGTTTAAGTCACTTTTTGGCTACAAG
2561 TAAGAGATTAGAAATATTCAGCATAAAGAGATGGCATTAACTCTGCATGTAAAGAAAACACATGTATACCCAGGCTGTAC
2641 AACTGCCTCTGAAATTAAGAGGAATTGTGTTTATTTCATAGTTATCTCTGGTACTTCACTGTTATTTTATTTTCACCCCC
2721 AACTATGCGTCAATCATAGCCCTTTCCCTTCTTTGCTTATTATGGCTACAGATTTCTCACTGTTCTCTGCAGCCCATGTA
2801 ATTTCATACAGTATTTTGTAGGTTGTGATAAGGAATTTGAAATTTTTAATATAGTGAAAAATTGGATTTAACTGGAGAGT
2881 TTGAGGACATTTTTAAGTTAGAAATGCACCATTTGAATCATTTAATTGGCATAATTGGGATGTACTCTACACAGTTTATA
2961 GGATTAAATTACTGAGTTAGTAATGTTTGTATGAAAGAAATGTTATTAGATTCTACCACAAAATATAGTAAACATGAAAT
3041 CAGTTAGAATAGGTAAAGCATTAATAATGGTAGGCTATATATCATAATCACTATATAAAGAAACATCAGAATTTGGAAAC
3121 CCCTTAAGCAAAAATATATCTTAGAAATCTTAAGGACACTTAATGGCAAGCAAAAAAGTTTAAATTTAGTTTTTTATAAA
3201 TTACATATAGCACAATTTATGTGTACATGTAGAATCTTTTAGTTTTTAGTGTTTATGTAATATATTAGACAATAATAAAC
3281 ATTTACATTTATGTTTACATTTATATTTAATTTTTCAAATTTAATTTAAATTTCTAAATGCTTCTGTGGATTTAAATTTT
3361 GGAATAATCTTTTCTTCCCCATTGATACTGGAATCTTGGGAAGTTTCTTACTCATATCACAATATGTTTTATTTAAATGG
3441 ATGCAGCTTACATTGCAGAGTTTATATAAATAATCACATAACAAGCCAATTCCTTAGTCATTTTCTGTATTAAAAAACTC
3521 AGAGATCTAGAGAGCTTTTGGATTGAAATATTTCCTTGGTGATTTTGGATGCAAACCTGATTTCTGTGTTCACACCATGG
3601 CCAGAGATGGGACTGTTAGCACCACCTGCTTCTTTAATGTCGTCCATATGATCAGCATCAGCACCAGAAACTCCAGGTGT
3681 CCCAAACTTAAAGTGAAAGCCATAGAGTCCTTTGGTGACTCCCATGTTCTGTGCTGGTTCTAGAACATGCTGGTAAATAT
3761 CAGAGTTTCTATGCTTATGGCTGATAAGTAGACATTTTTAAAAATCATAAAAACTGTATTTTCTATATAGTTCAGCTAAG
3841 TTTATGAAAAAGATGCAGACTCAGTATTTGGAGCATTGCTATCGCTCCATGATGTGTTTAAAAATTATTTTTAAATTGAC
3921 AAAATTTTATATCTACATATATATATATCTTGTAACACATGATGTTTGAAATGCTTAATTCTAGCCAATTAAAAATGCTT
4001 TACCTCAATAGTTATTTTTATTGTGAGAAAGGTCAACATGGTCTTGGCACTTAAAAAAAAAAAAACAATATATTCTCAAT
4081 AACTGTATTCACTCTGCACTACAATAGGTCTCTTGAACTAATTCCTCCTAGCTAACAGGCATTGTTTATCATTTAACAGA
4161 TAATTCTCTAAGCCCCCTTCTCCTAAAACTTCAGCATCTCTTAACCTTCTTTCTAGTCTCTACTTTTATGAGATCAACTT
4241 GTTTAGATTCCACGTGAGTGAGACCATGAGGTATTCATCTTTCTGTGTTCTGCTCCATTGGTCTATTTATCTGTTTTTAA
4321 TGCCAGTATTGGACTGTTTCAGTTACTGTAGCTTTGCAGTATATTTGACTGTCAAGTAGTGCAGTGCTTCCAACCTTCAG
4401 AGTCTTTTACTGTACTATATGAATTTTTGTGTTTTTTTTGTGAAAAATTTTATTGATATTTTGATAGACATTATGTTAAA
4481 TATATACATCATTTTGTGTAACATAGACTTTTTAGCAATATTAATTTGGCCAATTTATGAATAAGGGATAACTTTTCATT
4561 TATTTATGTTTAATTTTATACCTCAGTTTTCTTTAGCTTTTAATGTAGAGATCTTTAACATTTTTGAATAATTTTATTTG
4641 GAAGTAAACTTTCTGTAACTATTGCAGGTGTCAATTGTTTTCTTTATTTCTTTTTCAGATAGTTTGTTGTTAGTGTATAG
4721 AAATGCTACTGACCCTTATATCTTGATTTTGTATCCTGCAACTTTAGTGAATTTATTCTAAGTATTTTTAAAGTTTTCTA
4801 TTTATAAGACTATGATATCTGCAAACAGGGACAATTATTTTCTTTCTTTCCAATTTGGTTGTCTTTGGTTTTGTTTTCTA
4881 ATTTCTCTGGCCTGGAAATTCAGTAGCATGTTAAATAAGAGTGATGAAGTTAGATATATTTGCCTTACTATAACTCTTAG
4961 AAAAAAGGCTTACAACTTTTGAAGGTTTAGCATGATGTCAGATGTCCATTTGTCATATATGGCCTTTATTGGCTTGAGGT
5041 ATGTATGTTCTATATGTAATTTGTTTTGAGATTTTGTCATAAAGTAATGTTGAATTTTCTAAAATTCTTTTTCTGCATTC
5121 ACTTAAAAGTTATAATTGGTTCTGAGATCCTTCATCTTTCTCAGAATCTAGGAGGATGCATCTGTACCTAGAGGAGGACA
5201 CAAAGGCATCATATGTTACATTCTCGTGACATATAATGTCTACTGCTTATAATGTCTACTGTGAGTTTCTGACTCCCCAA
5281 ATGAAATTGAGGCCCAGAAACTTTCAACTGCTTTGTTCGTTGAATAATGCCAAGTGTCTGGAAATGTGACTATTCAGATT
5361 AAATGCTTAATGTGTGTGTGTTGACTAAATAAATCTCAACCAGAACCTTCTCAGATATTTTGTTGAACGTGGGACCTTTG
5441 TTTTTTTTTGTTGTTTTGTTTTGTTTTGTTTTTGTTGTTGTTGTTGTTGTTGTTTACCAGCAGGGGACCCCTGTTTTGTC
5521 TATGTCAAGAACAAAGACCAGGCAAAAGAAATGTCAAGCCGCATTTACAAATGCAAAAATGGACTTGTTTTTGATATGCT
5601 TTTCCCAACAATAAGGGACATGAGTCATTGGGGCATGTTACAGAGAGTTTCAGTAAAATTCAGAAAAAAATAATAAATAT
5681 GAACAGCCACAGCATGCCCAGAAGCCTTTTTATGGAGCCAGGCATGGTTGACCTGCTTTCCATGTCTCAAAACATTAGTC
5761 CCTACAAGAACCCTATGAGGTTTATCTTCTTTTCACCCATTTTGAGAGAAGAAAAGTTCAGCTCAGAGAGCTGCAGGAAC
5841 ATTGGGGACATCTCCAAGTCACAGCCAATAGGTGGCAGTCATCAGTGTGTCTTGGAAGGGACAAACATTGAGCTTCTGAA
5921 CAGCTACTCCAGAAACTATGGTGCTGTGGTGAAGTCCTGGTTAGGAGCCTAGGAAAATGGTGAAGGAAAAGATGGTCCCA
6001 GCCTGCAAAGCTGAAGTCAGGAACCCACCAGGATCTCCCTTCTCCCTAGCCTGGTGGTCCACATCATGCAGATTTACTCT
6081 AGATTCAGCTTAGACTCATTTTTATACTACTCGGGGGACAAGGAGGGAACTACAGTCAGTAACAGCAGCATGAGCCTCAG
6161 GTGCTTTGGGGATTGAAATTCAGACCAGGAAATTCCAATACATCAGTGCATGTGGAGGACATGAGTATTTAAGGAGAAGG
6241 TTCTAGGCTTCCGAAGTAAAATTGGATGTGGAGGTTGGGGATTGATTCAAACATTAATACTTTCAAGCGTTTCTATGGTA
6321 TTTGTCAGCTGTGGAGCAACAGCACACATCTGTATTAATAGCCTGTGTTAAGAGATTACTGTGAATCCTGAAAAACATCC
6401 TCATTGTAGAGATGAGAAAACACAGGCTTTTGCACATCCAATGTCTCCTTAAAGCATGTGGTTCAGAATTGAGAACGTGC
6481 AGAGTGAGAGTGGTATGAATTTTCCTGTAAGCTACCTGAAGTTCTGTTTGCTGTCATGTGGAAGAAAAGAGCCTTGGAGA
6561 AGTTTTATTTTTTTCTGTTTGGAAAGAATACACAGAGCAAGATGATTTACAATAAACCTTTTGACCTAACGCACAAAAAA
6641 AAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uuUUAUUGACGUCAAAACCGGUa 5'
            :| |||  :| ||||||||| 
Target 5' tgGAGAACCCTA-TTTTGGCCAa 3'
 2308 - 2329 160.00 -10.90
2 
miRNA  3' uuuuAUUGACGUCA--AAACCGGUa 5'
              ||:|  :| |  |||||||| 
Target 5' ttttTAGCAATATTAATTTGGCCAa 3'
 4509 - 4533 153.00 -9.80
3 
miRNA  3' uuUUAUUGACGUCAAAACCGGUa 5'
            |:| |||    |||||||:| 
Target 5' taAGTCACT----TTTTGGCTAc 3'
 2539 - 2557 143.00 -9.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31500638 40 COSMIC
COSN17418473 71 COSMIC
COSN31570863 73 COSMIC
COSN31545241 75 COSMIC
COSN1434541 95 COSMIC
COSN30497332 124 COSMIC
COSN1434542 243 COSMIC
COSN16967852 654 COSMIC
COSN16466822 763 COSMIC
COSN1099124 1380 COSMIC
COSN16214440 1755 COSMIC
COSN23780157 1758 COSMIC
COSN1434544 2008 COSMIC
COSN29964528 2024 COSMIC
COSN25722518 2424 COSMIC
COSN17182009 2543 COSMIC
COSN22126414 2596 COSMIC
COSN8436744 2614 COSMIC
COSN8436745 2783 COSMIC
COSN23438996 2947 COSMIC
COSN1434545 3408 COSMIC
COSN23263944 3535 COSMIC
COSN23774566 3885 COSMIC
COSN27803444 3985 COSMIC
COSN17425459 4056 COSMIC
COSN30229482 4065 COSMIC
COSN24339316 4066 COSMIC
COSN27865767 4286 COSMIC
COSN25261456 4368 COSMIC
COSN31960419 4835 COSMIC
COSN6445915 5305 COSMIC
COSN1099125 5385 COSMIC
COSN29515856 5450 COSMIC
COSN28258245 5475 COSMIC
COSN14492836 5498 COSMIC
COSN14494102 5499 COSMIC
COSN27691922 5542 COSMIC
COSN24743515 5660 COSMIC
COSN6025757 6309 COSMIC
COSN24108720 6457 COSMIC
COSN28145255 6617 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1340771330 2 dbSNP
rs375656036 4 dbSNP
rs531953752 11 dbSNP
rs370191080 12 dbSNP
rs760119392 15 dbSNP
rs1174799432 16 dbSNP
rs1276988991 17 dbSNP
rs1436093410 18 dbSNP
rs890675169 19 dbSNP
rs1009152049 21 dbSNP
rs1428693876 23 dbSNP
rs1263601286 27 dbSNP
rs770627995 28 dbSNP
rs1484314648 32 dbSNP
rs370115238 38 dbSNP
rs567802234 39 dbSNP
rs764251185 41 dbSNP
rs1429446438 45 dbSNP
rs1173023007 46 dbSNP
rs867531113 63 dbSNP
rs1487838280 65 dbSNP
rs1051811025 69 dbSNP
rs1258210192 69 dbSNP
rs962102026 72 dbSNP
rs34228925 74 dbSNP
rs538332052 82 dbSNP
rs1232820876 89 dbSNP
rs1274600844 90 dbSNP
rs556646698 95 dbSNP
rs1280330522 105 dbSNP
rs578152047 106 dbSNP
rs1340271892 107 dbSNP
rs935430735 109 dbSNP
rs1417119650 110 dbSNP
rs1399464285 113 dbSNP
rs1027719898 115 dbSNP
rs1301693082 129 dbSNP
rs1462184098 134 dbSNP
rs1374507242 148 dbSNP
rs969465096 149 dbSNP
rs1477403295 151 dbSNP
rs1382158970 153 dbSNP
rs979878919 157 dbSNP
rs927137551 166 dbSNP
rs545384691 172 dbSNP
rs764794164 180 dbSNP
rs1200007724 188 dbSNP
rs1021953888 193 dbSNP
rs531648436 196 dbSNP
rs905822100 200 dbSNP
rs554228035 214 dbSNP
rs1281140597 217 dbSNP
rs1216995570 219 dbSNP
rs1317723743 220 dbSNP
rs879125240 221 dbSNP
rs573660253 223 dbSNP
rs1247643778 230 dbSNP
rs776680460 236 dbSNP
rs1214540715 242 dbSNP
rs1391523833 242 dbSNP
rs752631245 243 dbSNP
rs1001590941 248 dbSNP
rs760746520 249 dbSNP
rs1464745803 254 dbSNP
rs996226 262 dbSNP
rs1166738308 270 dbSNP
rs1471683713 272 dbSNP
rs943008554 276 dbSNP
rs1193687120 279 dbSNP
rs769459085 282 dbSNP
rs1419787627 283 dbSNP
rs1240059082 296 dbSNP
rs1197009395 297 dbSNP
rs1457437566 306 dbSNP
rs1274203464 329 dbSNP
rs1043133940 330 dbSNP
rs925662933 334 dbSNP
rs931727517 338 dbSNP
rs963478041 340 dbSNP
rs550468863 366 dbSNP
rs753756631 369 dbSNP
rs1240354517 374 dbSNP
rs1378517796 383 dbSNP
rs1306398711 389 dbSNP
rs1371361579 391 dbSNP
rs1325095695 396 dbSNP
rs973628359 400 dbSNP
rs775071980 403 dbSNP
rs890665357 404 dbSNP
rs1159105707 406 dbSNP
rs1455238661 408 dbSNP
rs1192792076 431 dbSNP
rs1009554244 446 dbSNP
rs1176784853 458 dbSNP
rs1036644002 467 dbSNP
rs953677213 468 dbSNP
rs1156281594 483 dbSNP
rs762705016 485 dbSNP
rs1289568067 492 dbSNP
rs1206267875 500 dbSNP
rs1400884277 503 dbSNP
rs78412888 506 dbSNP
rs935322910 507 dbSNP
rs1276288290 520 dbSNP
rs561129583 521 dbSNP
rs1318657943 523 dbSNP
rs915362559 523 dbSNP
rs1401772193 525 dbSNP
rs531456156 526 dbSNP
rs1157962084 529 dbSNP
rs994826989 532 dbSNP
rs751248366 536 dbSNP
rs1174569824 549 dbSNP
rs752247628 555 dbSNP
rs1304900060 557 dbSNP
rs1376797502 559 dbSNP
rs1027627012 561 dbSNP
rs148460164 565 dbSNP
rs779943726 567 dbSNP
rs1261711772 570 dbSNP
rs905764081 576 dbSNP
rs753762262 578 dbSNP
rs1238127144 580 dbSNP
rs1311518189 583 dbSNP
rs1001431016 597 dbSNP
rs1280067133 601 dbSNP
rs1002247819 603 dbSNP
rs1270397005 605 dbSNP
rs1343765229 605 dbSNP
rs1220307795 616 dbSNP
rs1338110842 620 dbSNP
rs1297555567 622 dbSNP
rs1415266819 625 dbSNP
rs1326560124 626 dbSNP
rs895445286 628 dbSNP
rs536445251 630 dbSNP
rs1336172133 632 dbSNP
rs1412990165 632 dbSNP
rs1424812684 635 dbSNP
rs564597741 637 dbSNP
rs1288894830 642 dbSNP
rs1171616158 646 dbSNP
rs1449721904 652 dbSNP
rs1004510665 653 dbSNP
rs12133625 654 dbSNP
rs71648433 662 dbSNP
rs1238716576 663 dbSNP
rs1486247626 663 dbSNP
rs1207483304 664 dbSNP
rs1441331407 673 dbSNP
rs1273318925 675 dbSNP
rs536073203 678 dbSNP
rs1315859863 684 dbSNP
rs993134000 686 dbSNP
rs1029190783 690 dbSNP
rs1438971913 695 dbSNP
rs953684472 699 dbSNP
rs1364974001 702 dbSNP
rs767755476 717 dbSNP
rs967712126 719 dbSNP
rs1388133103 721 dbSNP
rs1398565527 735 dbSNP
rs1170341851 738 dbSNP
rs1424747112 739 dbSNP
rs546962038 751 dbSNP
rs1180590368 753 dbSNP
rs187908599 754 dbSNP
rs1407498350 755 dbSNP
rs925610200 760 dbSNP
rs1238200173 761 dbSNP
rs141715640 769 dbSNP
rs985910424 770 dbSNP
rs373633710 784 dbSNP
rs1214153980 807 dbSNP
rs867665918 811 dbSNP
rs1323259175 819 dbSNP
rs1445163515 821 dbSNP
rs1227627487 849 dbSNP
rs1378579690 853 dbSNP
rs1309988049 858 dbSNP
rs1375031950 869 dbSNP
rs912049371 870 dbSNP
rs944918334 879 dbSNP
rs1351960152 913 dbSNP
rs1036958545 915 dbSNP
rs1163316945 920 dbSNP
rs946852288 921 dbSNP
rs1045571481 933 dbSNP
rs1179903883 934 dbSNP
rs549457402 941 dbSNP
rs1237236800 946 dbSNP
rs115581862 960 dbSNP
rs1489355460 963 dbSNP
rs1049012308 971 dbSNP
rs1282700550 974 dbSNP
rs1358709144 988 dbSNP
rs1234949234 1004 dbSNP
rs750966543 1007 dbSNP
rs74343513 1038 dbSNP
rs1457277195 1043 dbSNP
rs550409893 1045 dbSNP
rs1036010519 1048 dbSNP
rs898897297 1066 dbSNP
rs1196612154 1070 dbSNP
rs111376296 1076 dbSNP
rs1035097624 1077 dbSNP
rs1292078205 1078 dbSNP
rs527350685 1082 dbSNP
rs1361800064 1083 dbSNP
rs953539588 1087 dbSNP
rs1417380792 1093 dbSNP
rs184882139 1098 dbSNP
rs1176380295 1102 dbSNP
rs187638854 1114 dbSNP
rs1166144933 1123 dbSNP
rs1423299863 1126 dbSNP
rs1190464927 1127 dbSNP
rs1019204921 1129 dbSNP
rs1265297699 1131 dbSNP
rs1214329990 1132 dbSNP
rs1487361542 1145 dbSNP
rs17554185 1146 dbSNP
rs967279295 1151 dbSNP
rs1234239336 1175 dbSNP
rs1314102438 1180 dbSNP
rs567127948 1180 dbSNP
rs978714045 1185 dbSNP
rs371611249 1186 dbSNP
rs74530808 1189 dbSNP
rs1341502119 1197 dbSNP
rs968472750 1198 dbSNP
rs1397819949 1204 dbSNP
rs1395573421 1205 dbSNP
rs953052601 1218 dbSNP
rs980839160 1219 dbSNP
rs1332237635 1221 dbSNP
rs184982883 1223 dbSNP
rs911623748 1224 dbSNP
rs1467121118 1235 dbSNP
rs576298097 1239 dbSNP
rs944467467 1244 dbSNP
rs1478053054 1246 dbSNP
rs1425441017 1247 dbSNP
rs1293688971 1253 dbSNP
rs189444461 1254 dbSNP
rs75221610 1255 dbSNP
rs1201162561 1257 dbSNP
rs1484272398 1258 dbSNP
rs576508857 1266 dbSNP
rs1204496109 1279 dbSNP
rs917145493 1282 dbSNP
rs1319078703 1287 dbSNP
rs930896339 1297 dbSNP
rs1280419750 1299 dbSNP
rs1217354035 1311 dbSNP
rs1049336251 1326 dbSNP
rs147274185 1327 dbSNP
rs779174308 1328 dbSNP
rs1199430480 1331 dbSNP
rs1314061892 1347 dbSNP
rs559297016 1351 dbSNP
rs1253417691 1362 dbSNP
rs1486462339 1364 dbSNP
rs1951729 1367 dbSNP
rs1465781320 1374 dbSNP
rs1036250040 1375 dbSNP
rs1168196048 1379 dbSNP
rs1056402172 1382 dbSNP
rs896532981 1385 dbSNP
rs1010066176 1386 dbSNP
rs1369049387 1395 dbSNP
rs1020114203 1400 dbSNP
rs930313257 1403 dbSNP
rs1050175535 1408 dbSNP
rs888902974 1413 dbSNP
rs1170915431 1420 dbSNP
rs549400655 1423 dbSNP
rs1260222731 1424 dbSNP
rs548177599 1430 dbSNP
rs1197219452 1437 dbSNP
rs569165565 1447 dbSNP
rs1032951245 1448 dbSNP
rs1247562020 1450 dbSNP
rs116647116 1452 dbSNP
rs1313651324 1457 dbSNP
rs1447077669 1467 dbSNP
rs1378724741 1477 dbSNP
rs985765043 1496 dbSNP
rs1464939885 1504 dbSNP
rs1019034733 1513 dbSNP
rs1164966983 1528 dbSNP
rs1397970403 1533 dbSNP
rs1297421366 1538 dbSNP
rs1009799950 1541 dbSNP
rs538152220 1542 dbSNP
rs1240305438 1543 dbSNP
rs1176979499 1544 dbSNP
rs1437634797 1553 dbSNP
rs1326990070 1559 dbSNP
rs1232383773 1562 dbSNP
rs140809822 1567 dbSNP
rs571902065 1570 dbSNP
rs539127450 1578 dbSNP
rs1349334303 1581 dbSNP
rs144656659 1582 dbSNP
rs919428007 1583 dbSNP
rs566170597 1587 dbSNP
rs968040180 1595 dbSNP
rs1256835346 1596 dbSNP
rs981212443 1602 dbSNP
rs180899257 1606 dbSNP
rs1355182739 1610 dbSNP
rs554808330 1616 dbSNP
rs1306687785 1617 dbSNP
rs1331481442 1617 dbSNP
rs1440980423 1617 dbSNP
rs1325217822 1619 dbSNP
rs1487085888 1627 dbSNP
rs1384851754 1629 dbSNP
rs1364957357 1635 dbSNP
rs984990834 1644 dbSNP
rs147871992 1650 dbSNP
rs1262805042 1652 dbSNP
rs926846901 1653 dbSNP
rs1157114099 1666 dbSNP
rs1469758998 1667 dbSNP
rs1378586426 1669 dbSNP
rs938271530 1678 dbSNP
rs7415937 1680 dbSNP
rs1450229827 1681 dbSNP
rs769794019 1682 dbSNP
rs758549444 1684 dbSNP
rs917051920 1699 dbSNP
rs940545705 1712 dbSNP
rs1433125383 1716 dbSNP
rs775552722 1718 dbSNP
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rs558316032 1738 dbSNP
rs1345354347 1742 dbSNP
rs1158105734 1748 dbSNP
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rs1290439010 1760 dbSNP
rs1344616524 1771 dbSNP
rs902996834 1779 dbSNP
rs1401723436 1780 dbSNP
rs1362543690 1781 dbSNP
rs768762875 1782 dbSNP
rs1000005703 1791 dbSNP
rs1174500540 1792 dbSNP
rs1479686835 1797 dbSNP
rs944412532 1798 dbSNP
rs1054304680 1803 dbSNP
rs1040167878 1819 dbSNP
rs1261640158 1822 dbSNP
rs892601091 1826 dbSNP
rs1442467899 1837 dbSNP
rs1280360357 1838 dbSNP
rs1198325142 1840 dbSNP
rs1009744294 1841 dbSNP
rs1043973454 1848 dbSNP
rs904139931 1850 dbSNP
rs1269515731 1851 dbSNP
rs1234435071 1853 dbSNP
rs889003075 1859 dbSNP
rs1007485863 1868 dbSNP
rs1002190209 1869 dbSNP
rs1034125670 1888 dbSNP
rs768245745 1904 dbSNP
rs1307846716 1912 dbSNP
rs1351079984 1920 dbSNP
rs1217417964 1922 dbSNP
rs960709002 1927 dbSNP
rs1467511116 1933 dbSNP
rs1261678734 1934 dbSNP
rs1013599078 1937 dbSNP
rs1488395832 1945 dbSNP
rs774107067 1955 dbSNP
rs571522355 1957 dbSNP
rs540829878 1969 dbSNP
rs1015634007 1972 dbSNP
rs1258288470 1983 dbSNP
rs1460554773 1983 dbSNP
rs1018610661 1988 dbSNP
rs559143720 1992 dbSNP
rs920505477 1999 dbSNP
rs1228764166 2015 dbSNP
rs1357176519 2019 dbSNP
rs1285975842 2021 dbSNP
rs993249970 2028 dbSNP
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rs41305735 2049 dbSNP
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rs1026508031 2062 dbSNP
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rs1170401238 2067 dbSNP
rs951818051 2069 dbSNP
rs1415347693 2070 dbSNP
rs1282711738 2076 dbSNP
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rs986080362 2097 dbSNP
rs1232049887 2100 dbSNP
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rs1160022008 2104 dbSNP
rs1243927648 2105 dbSNP
rs575884781 2114 dbSNP
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rs150379481 5388 dbSNP
rs1249931942 5396 dbSNP
rs1309408845 5406 dbSNP
rs375581706 5408 dbSNP
rs1054714977 5414 dbSNP
rs1292544428 5415 dbSNP
rs1279929297 5416 dbSNP
rs893091074 5417 dbSNP
rs566449876 5429 dbSNP
rs1356319718 5430 dbSNP
rs1289469872 5431 dbSNP
rs915893458 5432 dbSNP
rs1229728836 5434 dbSNP
rs533746027 5437 dbSNP
rs1307038936 5441 dbSNP
rs1436821855 5441 dbSNP
rs1480443681 5441 dbSNP
rs57174230 5441 dbSNP
rs948703372 5442 dbSNP
rs1208493071 5443 dbSNP
rs1412652690 5448 dbSNP
rs981478048 5448 dbSNP
rs1473617210 5451 dbSNP
rs1488952331 5451 dbSNP
rs555088499 5451 dbSNP
rs971476952 5451 dbSNP
rs1003318203 5454 dbSNP
rs1473085672 5459 dbSNP
rs1468285467 5462 dbSNP
rs376051230 5464 dbSNP
rs1417277262 5467 dbSNP
rs1429824953 5469 dbSNP
rs1052264862 5472 dbSNP
rs1219278008 5472 dbSNP
rs1322485086 5472 dbSNP
rs1389023117 5472 dbSNP
rs140093649 5472 dbSNP
rs145878075 5472 dbSNP
rs552874987 5472 dbSNP
rs760358199 5472 dbSNP
rs780587631 5472 dbSNP
rs1168639364 5474 dbSNP
rs202087422 5475 dbSNP
rs1432432182 5476 dbSNP
rs1315198680 5477 dbSNP
rs946602083 5478 dbSNP
rs1360043953 5479 dbSNP
rs1430457477 5480 dbSNP
rs1043688546 5481 dbSNP
rs1287693145 5482 dbSNP
rs1427563209 5484 dbSNP
rs202150489 5493 dbSNP
rs113035063 5498 dbSNP
rs1249094492 5500 dbSNP
rs1190898879 5504 dbSNP
rs1016887167 5506 dbSNP
rs962690481 5511 dbSNP
rs776056980 5523 dbSNP
rs370162983 5527 dbSNP
rs996889511 5533 dbSNP
rs921003797 5543 dbSNP
rs1276075182 5544 dbSNP
rs1302701713 5544 dbSNP
rs1365458618 5548 dbSNP
rs6426469 5549 dbSNP
rs1432607624 5558 dbSNP
rs1364401265 5559 dbSNP
rs890832057 5561 dbSNP
rs986569678 5562 dbSNP
rs1360905933 5575 dbSNP
rs1003959911 5580 dbSNP
rs1434404940 5582 dbSNP
rs1190965896 5591 dbSNP
rs924731607 5594 dbSNP
rs1015709396 5600 dbSNP
rs557123679 5607 dbSNP
rs934850719 5610 dbSNP
rs575478630 5616 dbSNP
rs893427259 5619 dbSNP
rs1486785580 5621 dbSNP
rs962881380 5626 dbSNP
rs1276273183 5627 dbSNP
rs1225942202 5636 dbSNP
rs1306636207 5640 dbSNP
rs374134952 5645 dbSNP
rs1044403656 5647 dbSNP
rs907225852 5651 dbSNP
rs1376876373 5655 dbSNP
rs1023606984 5662 dbSNP
rs1301206185 5663 dbSNP
rs970342934 5669 dbSNP
rs183509486 5670 dbSNP
rs1026407512 5677 dbSNP
rs573273763 5684 dbSNP
rs751849725 5687 dbSNP
rs886934306 5688 dbSNP
rs934723447 5691 dbSNP
rs538915619 5699 dbSNP
rs1428229679 5703 dbSNP
rs1004090371 5705 dbSNP
rs1017246989 5713 dbSNP
rs1426144562 5716 dbSNP
rs988922768 5719 dbSNP
rs540592720 5723 dbSNP
rs1157320673 5732 dbSNP
rs1483074201 5737 dbSNP
rs946508759 5740 dbSNP
rs561968545 5763 dbSNP
rs899714786 5776 dbSNP
rs1436383059 5784 dbSNP
rs1325301108 5785 dbSNP
rs1292550059 5795 dbSNP
rs1319903393 5795 dbSNP
rs975342973 5805 dbSNP
rs1351113452 5807 dbSNP
rs1310104868 5812 dbSNP
rs1408298491 5812 dbSNP
rs1396036774 5815 dbSNP
rs1294528204 5817 dbSNP
rs1459749399 5834 dbSNP
rs1367266548 5840 dbSNP
rs1027971177 5841 dbSNP
rs932590233 5842 dbSNP
rs75013858 5843 dbSNP
rs1413604953 5844 dbSNP
rs1179377749 5845 dbSNP
rs138063937 5850 dbSNP
rs890829048 5858 dbSNP
rs1350185312 5865 dbSNP
rs1223033797 5879 dbSNP
rs986919786 5899 dbSNP
rs1281823775 5900 dbSNP
rs1331154117 5905 dbSNP
rs924417301 5907 dbSNP
rs1209218863 5909 dbSNP
rs61750828 5911 dbSNP
rs990356016 5913 dbSNP
rs914794497 5914 dbSNP
rs1335450348 5916 dbSNP
rs1015271084 5920 dbSNP
rs1466798995 5922 dbSNP
rs1302195260 5928 dbSNP
rs533114675 5933 dbSNP
rs948943889 5939 dbSNP
rs1200347762 5946 dbSNP
rs1325633912 5950 dbSNP
rs1044645888 5957 dbSNP
rs1391427787 5968 dbSNP
rs1156375272 5969 dbSNP
rs551616269 5970 dbSNP
rs1246955221 5978 dbSNP
rs1377878201 5981 dbSNP
rs1469262305 5993 dbSNP
rs1200472049 5998 dbSNP
rs1431244623 5999 dbSNP
rs1157201065 6002 dbSNP
rs543521023 6005 dbSNP
rs1466232413 6022 dbSNP
rs1266142928 6023 dbSNP
rs1203492818 6027 dbSNP
rs1349962153 6040 dbSNP
rs1458091091 6064 dbSNP
rs1048274926 6075 dbSNP
rs1392888763 6080 dbSNP
rs1463114421 6082 dbSNP
rs886550432 6090 dbSNP
rs995596941 6093 dbSNP
rs1303178819 6099 dbSNP
rs1436247403 6100 dbSNP
rs756619541 6104 dbSNP
rs879561712 6108 dbSNP
rs1367997746 6112 dbSNP
rs1316799915 6113 dbSNP
rs1399624901 6113 dbSNP
rs1023134414 6114 dbSNP
rs1173810767 6118 dbSNP
rs1432555491 6118 dbSNP
rs970712706 6122 dbSNP
rs1394071052 6125 dbSNP
rs1169038897 6126 dbSNP
rs1451046122 6134 dbSNP
rs981749831 6138 dbSNP
rs1192307721 6140 dbSNP
rs1442919650 6143 dbSNP
rs1036086733 6165 dbSNP
rs956048223 6199 dbSNP
rs988829646 6203 dbSNP
rs1346049364 6206 dbSNP
rs187790963 6207 dbSNP
rs1279815391 6211 dbSNP
rs143673899 6212 dbSNP
rs1344680648 6218 dbSNP
rs1268949548 6219 dbSNP
rs898352544 6229 dbSNP
rs35325856 6233 dbSNP
rs567190983 6241 dbSNP
rs1341592936 6244 dbSNP
rs1335669925 6248 dbSNP
rs1412360143 6250 dbSNP
rs753631209 6251 dbSNP
rs374192532 6253 dbSNP
rs979636943 6254 dbSNP
rs1417197457 6255 dbSNP
rs1167102562 6257 dbSNP
rs1473107753 6258 dbSNP
rs1370093002 6262 dbSNP
rs193173181 6263 dbSNP
rs921148607 6273 dbSNP
rs1211132039 6274 dbSNP
rs557184987 6276 dbSNP
rs1484152897 6289 dbSNP
rs1271413628 6291 dbSNP
rs1357735948 6293 dbSNP
rs932554504 6293 dbSNP
rs1286420307 6294 dbSNP
rs1179298769 6299 dbSNP
rs778197767 6301 dbSNP
rs1473150714 6303 dbSNP
rs558542216 6304 dbSNP
rs754792785 6309 dbSNP
rs569215375 6310 dbSNP
rs912213918 6316 dbSNP
rs1405684814 6323 dbSNP
rs939658056 6324 dbSNP
rs1162617486 6325 dbSNP
rs1031818019 6331 dbSNP
rs1417320597 6337 dbSNP
rs1182987824 6346 dbSNP
rs1471305244 6347 dbSNP
rs1036662328 6353 dbSNP
rs891322352 6376 dbSNP
rs1292650502 6401 dbSNP
rs898209846 6404 dbSNP
rs1474032618 6407 dbSNP
rs914718404 6408 dbSNP
rs970203502 6415 dbSNP
rs1288472304 6417 dbSNP
rs1229673727 6435 dbSNP
rs1370752154 6436 dbSNP
rs1163924181 6438 dbSNP
rs995305533 6442 dbSNP
rs1408276651 6450 dbSNP
rs1044949995 6458 dbSNP
rs1332545520 6472 dbSNP
rs906059076 6477 dbSNP
rs1003518648 6478 dbSNP
rs1035920932 6481 dbSNP
rs1389255222 6485 dbSNP
rs956288014 6489 dbSNP
rs1010208684 6494 dbSNP
rs1402473686 6496 dbSNP
rs539611344 6497 dbSNP
rs1406101898 6507 dbSNP
rs1176766702 6508 dbSNP
rs796186350 6518 dbSNP
rs1292391801 6520 dbSNP
rs12567934 6528 dbSNP
rs573266826 6537 dbSNP
rs1468464550 6538 dbSNP
rs968788646 6539 dbSNP
rs147189614 6550 dbSNP
rs555726622 6553 dbSNP
rs1217345938 6567 dbSNP
rs942104988 6568 dbSNP
rs1038196278 6578 dbSNP
rs898300312 6588 dbSNP
rs574132048 6589 dbSNP
rs1439868403 6591 dbSNP
rs891073249 6605 dbSNP
rs544622399 6607 dbSNP
rs1432988488 6618 dbSNP
rs1343450446 6626 dbSNP
rs375121925 6627 dbSNP
rs183288998 6631 dbSNP
rs188637371 6632 dbSNP
rs1426082166 6633 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 339500.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' uuuuAUUGACGUCA--AAACCGGUa 5'
              ||:|  :| |  |||||||| 
Target 5' uuuuUAGCAAUAUUAAUUUGGCCAa 3'
 		11 - 35
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000343776.5 | 3UTR | UAACAUAGACUUUUUAGCAAUAUUAAUUUGGCCAAUUUAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
PRAD 0.923 0.01 0.900 0.02 5 Click to see details
BRCA -0.336 0.02 -0.238 0.08 35 Click to see details
KICH -0.546 0.04 -0.382 0.12 11 Click to see details
LUSC 0.246 0.2 0.257 0.19 14 Click to see details
UCEC -0.221 0.26 0.100 0.38 11 Click to see details
CHOL -0.349 0.33 -0.200 0.4 4 Click to see details
KIRC 0.112 0.34 0.044 0.44 16 Click to see details
LIHC 0.072 0.34 0.102 0.28 34 Click to see details
HNSC -0.132 0.35 -0.236 0.24 11 Click to see details
PAAD 0.404 0.37 0.500 0.33 3 Click to see details
THCA 0.03 0.43 -0.024 0.45 34 Click to see details
ESCA -0.172 0.44 -0.500 0.33 3 Click to see details
KIRP 0.044 0.46 0.321 0.24 7 Click to see details
STAD 0.014 0.48 0.248 0.24 10 Click to see details
STAD 0.014 0.48 0.248 0.24 10 Click to see details
STAD 0.014 0.48 0.248 0.24 10 Click to see details
STAD 0.014 0.48 0.248 0.24 10 Click to see details
STAD 0.014 0.48 0.248 0.24 10 Click to see details
374 hsa-miR-548s Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT075229 PHF13 PHD finger protein 13 2 4
MIRT090370 CNBP CCHC-type zinc finger nucleic acid binding protein 2 2
MIRT096411 C5ORF22 chromosome 5 open reading frame 22 2 2
MIRT153366 MAVS mitochondrial antiviral signaling protein 2 2
MIRT194890 DCTN5 dynactin subunit 5 2 8
MIRT195549 NIP7 NIP7, nucleolar pre-rRNA processing protein 2 2
MIRT219209 LYRM4 LYR motif containing 4 2 2
MIRT234472 ZNF652 zinc finger protein 652 2 2
MIRT235966 BACH1 BTB domain and CNC homolog 1 2 2
MIRT271874 ZNF678 zinc finger protein 678 2 2
MIRT294224 U2AF2 U2 small nuclear RNA auxiliary factor 2 2 2
MIRT334729 BTG2 BTG anti-proliferation factor 2 2 4
MIRT441397 SOX5 SRY-box 5 2 2
MIRT441551 TBCEL tubulin folding cofactor E like 2 2
MIRT441568 PLEKHA2 pleckstrin homology domain containing A2 2 2
MIRT441581 POLR1B RNA polymerase I subunit B 2 2
MIRT441681 GABRB2 gamma-aminobutyric acid type A receptor beta2 subunit 2 2
MIRT442049 KLHDC10 kelch domain containing 10 2 2
MIRT442633 TBC1D12 TBC1 domain family member 12 2 2
MIRT442694 ZNF646 zinc finger protein 646 2 4
MIRT443108 DENND5B DENN domain containing 5B 2 2
MIRT443110 VLDLR very low density lipoprotein receptor 2 2
MIRT443423 MAPT microtubule associated protein tau 2 2
MIRT443464 ACPP acid phosphatase, prostate 2 2
MIRT443763 HLF HLF, PAR bZIP transcription factor 2 2
MIRT443806 SIDT2 SID1 transmembrane family member 2 2 2
MIRT451031 ZNF610 zinc finger protein 610 2 2
MIRT451275 ZNF101 zinc finger protein 101 2 6
MIRT451671 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 6
MIRT454144 FLYWCH2 FLYWCH family member 2 2 8
MIRT454595 MAG myelin associated glycoprotein 2 4
MIRT459352 AGXT alanine-glyoxylate aminotransferase 2 2
MIRT460053 RPL22L1 ribosomal protein L22 like 1 2 2
MIRT460737 HEXA hexosaminidase subunit alpha 2 2
MIRT463084 ZNF618 zinc finger protein 618 2 2
MIRT465757 TMPPE transmembrane protein with metallophosphoesterase domain 2 8
MIRT471102 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472939 MSMO1 methylsterol monooxygenase 1 2 6
MIRT473686 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT474288 LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 2 2
MIRT476935 FAM83G family with sequence similarity 83 member G 2 2
MIRT477130 FAM118A family with sequence similarity 118 member A 2 2
MIRT477321 EPHA2 EPH receptor A2 2 2
MIRT478310 DDN dendrin 2 2
MIRT494936 IFFO2 intermediate filament family orphan 2 2 2
MIRT495287 RASL10B RAS like family 10 member B 2 2
MIRT495310 GDF11 growth differentiation factor 11 2 2
MIRT495323 ADAMTS8 ADAM metallopeptidase with thrombospondin type 1 motif 8 2 4
MIRT496580 RGMA repulsive guidance molecule family member a 2 2
MIRT496647 TNPO2 transportin 2 2 2
MIRT496804 SLC16A10 solute carrier family 16 member 10 2 2
MIRT496850 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496910 RTKN rhotekin 2 2
MIRT496955 MAP1LC3B microtubule associated protein 1 light chain 3 beta 2 2
MIRT497149 PRDM15 PR/SET domain 15 2 2
MIRT498253 ELAVL1 ELAV like RNA binding protein 1 2 2
MIRT498380 GPRC5B G protein-coupled receptor class C group 5 member B 2 2
MIRT500426 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500482 ZBTB4 zinc finger and BTB domain containing 4 2 6
MIRT505372 TMEM154 transmembrane protein 154 2 4
MIRT505674 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT509787 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT512344 ZNF665 zinc finger protein 665 2 4
MIRT512404 CD84 CD84 molecule 2 2
MIRT512526 ATCAY ATCAY, caytaxin 2 4
MIRT513223 RYK receptor-like tyrosine kinase 2 2
MIRT514247 S1PR2 sphingosine-1-phosphate receptor 2 2 2
MIRT514276 ZNF345 zinc finger protein 345 2 4
MIRT514426 SLC38A7 solute carrier family 38 member 7 2 2
MIRT514551 PTGR2 prostaglandin reductase 2 2 2
MIRT514776 RBM4B RNA binding motif protein 4B 2 2
MIRT514854 PTPLAD2 3-hydroxyacyl-CoA dehydratase 4 1 2
MIRT515033 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT515265 CSNK1E casein kinase 1 epsilon 2 2
MIRT515283 MSRB1 methionine sulfoxide reductase B1 2 2
MIRT515587 FBXL13 F-box and leucine rich repeat protein 13 2 2
MIRT515898 AGTPBP1 ATP/GTP binding protein 1 2 2
MIRT515945 C9orf156 tRNA methyltransferase O 2 2
MIRT516281 DBT dihydrolipoamide branched chain transacylase E2 2 2
MIRT516517 PARK2 parkin RBR E3 ubiquitin protein ligase 2 2
MIRT516932 THAP1 THAP domain containing 1 2 4
MIRT517201 OTUD6A OTU deubiquitinase 6A 2 2
MIRT517379 METTL7A methyltransferase like 7A 2 2
MIRT517467 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT517564 SNX22 sorting nexin 22 2 2
MIRT517617 DEGS1 delta 4-desaturase, sphingolipid 1 2 2
MIRT518210 TRMT10B tRNA methyltransferase 10B 2 2
MIRT518545 ABCA6 ATP binding cassette subfamily A member 6 2 2
MIRT519089 SLC4A1 solute carrier family 4 member 1 (Diego blood group) 2 4
MIRT519103 ALG1 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase 2 2
MIRT519138 C2orf49 chromosome 2 open reading frame 49 2 2
MIRT519316 TIMELESS timeless circadian clock 2 2
MIRT519393 DNASE2 deoxyribonuclease 2, lysosomal 2 4
MIRT519441 GLA galactosidase alpha 2 2
MIRT519465 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT519705 ZNF584 zinc finger protein 584 2 4
MIRT519822 ZKSCAN4 zinc finger with KRAB and SCAN domains 4 2 2
MIRT520236 USP9X ubiquitin specific peptidase 9, X-linked 2 4
MIRT520259 URGCP upregulator of cell proliferation 2 2
MIRT520409 TXNL1 thioredoxin like 1 2 4
MIRT521401 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT521511 QSOX1 quiescin sulfhydryl oxidase 1 2 2
MIRT522644 MANEAL mannosidase endo-alpha like 2 2
MIRT522789 KPNA4 karyopherin subunit alpha 4 2 4
MIRT523502 GMPS guanine monophosphate synthase 2 4
MIRT523686 FHL2 four and a half LIM domains 2 2 2
MIRT523902 EMC7 ER membrane protein complex subunit 7 2 4
MIRT524126 DMXL1 Dmx like 1 2 2
MIRT524770 BCKDK branched chain ketoacid dehydrogenase kinase 2 2
MIRT528264 GPRIN2 G protein regulated inducer of neurite outgrowth 2 2 2
MIRT528675 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT529138 CLCC1 chloride channel CLIC like 1 2 4
MIRT530704 RNMTL1 mitochondrial rRNA methyltransferase 3 2 2
MIRT531620 TM4SF5 transmembrane 4 L six family member 5 2 4
MIRT533399 TXNIP thioredoxin interacting protein 2 2
MIRT535650 NLN neurolysin 2 2
MIRT539958 SPRY1 sprouty RTK signaling antagonist 1 2 2
MIRT551760 MED21 mediator complex subunit 21 2 2
MIRT552021 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT557187 HOXA10 homeobox A10 2 2
MIRT560435 GOLGA7B golgin A7 family member B 2 2
MIRT561596 SKI SKI proto-oncogene 2 2
MIRT563915 STAT2 signal transducer and activator of transcription 2 2 2
MIRT565964 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT567313 HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 2 2
MIRT572687 NCMAP non-compact myelin associated protein 2 2
MIRT574419 SOX4 SRY-box 4 2 2
MIRT575235 Serping1 serine (or cysteine) peptidase inhibitor, clade G, member 1 2 2
MIRT576186 Vsig2 V-set and immunoglobulin domain containing 2 2 2
MIRT576301 Acbd7 acyl-Coenzyme A binding domain containing 7 2 2
MIRT576477 Lhx4 LIM homeobox protein 4 2 3
MIRT576576 Ptbp1 polypyrimidine tract binding protein 1 2 2
MIRT576602 Ccdc117 coiled-coil domain containing 117 2 2
MIRT576655 Fam216a family with sequence similarity 216, member A 2 2
MIRT576666 H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) 2 2
MIRT576703 Kras Kirsten rat sarcoma viral oncogene homolog 2 2
MIRT576845 Socs6 suppressor of cytokine signaling 6 2 2
MIRT576944 Aldoa aldolase A, fructose-bisphosphate 2 2
MIRT608646 ABCF3 ATP binding cassette subfamily F member 3 2 2
MIRT609892 C1S complement C1s 2 2
MIRT613517 ANAPC7 anaphase promoting complex subunit 7 2 2
MIRT614073 XRCC2 X-ray repair cross complementing 2 2 2
MIRT618202 C22orf39 chromosome 22 open reading frame 39 2 2
MIRT618350 CDKL1 cyclin dependent kinase like 1 2 2
MIRT618619 GREB1 growth regulation by estrogen in breast cancer 1 2 4
MIRT618826 PHF20 PHD finger protein 20 2 2
MIRT619371 SYT2 synaptotagmin 2 2 2
MIRT620103 HARBI1 harbinger transposase derived 1 2 2
MIRT620220 VN1R1 vomeronasal 1 receptor 1 2 2
MIRT621183 FAM153B family with sequence similarity 153 member B 2 2
MIRT621477 GPKOW G-patch domain and KOW motifs 2 2
MIRT621874 TAZ tafazzin 2 2
MIRT624054 EIF4E eukaryotic translation initiation factor 4E 2 2
MIRT624689 AR androgen receptor 2 2
MIRT625234 C6orf89 chromosome 6 open reading frame 89 2 2
MIRT626070 CWF19L1 CWF19 like 1, cell cycle control (S. pombe) 2 2
MIRT629490 PABPC1L2A poly(A) binding protein cytoplasmic 1 like 2A 2 2
MIRT629861 GATAD1 GATA zinc finger domain containing 1 2 2
MIRT630995 ZNF573 zinc finger protein 573 2 2
MIRT631087 UQCRB ubiquinol-cytochrome c reductase binding protein 2 2
MIRT631279 SGSM1 small G protein signaling modulator 1 2 2
MIRT631526 MYO6 myosin VI 2 2
MIRT631637 WDR91 WD repeat domain 91 2 4
MIRT632773 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT633272 FGFR1OP2 FGFR1 oncogene partner 2 2 2
MIRT633588 ABRACL ABRA C-terminal like 2 2
MIRT634152 YME1L1 YME1 like 1 ATPase 2 2
MIRT634920 CHMP1B charged multivesicular body protein 1B 2 2
MIRT635848 PRR11 proline rich 11 2 2
MIRT636006 SAMD15 sterile alpha motif domain containing 15 2 4
MIRT639203 RAD51 RAD51 recombinase 2 2
MIRT639378 FFAR4 free fatty acid receptor 4 2 2
MIRT639535 GSG2 histone H3 associated protein kinase 2 2
MIRT639635 PREX2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 2 2
MIRT640224 TOMM40 translocase of outer mitochondrial membrane 40 2 2
MIRT640297 PRR13 proline rich 13 2 2
MIRT640683 MCUR1 mitochondrial calcium uniporter regulator 1 2 2
MIRT641118 NPHP3 nephrocystin 3 2 2
MIRT641451 LRIG1 leucine rich repeats and immunoglobulin like domains 1 2 2
MIRT642306 FPR1 formyl peptide receptor 1 2 2
MIRT642712 ZNF273 zinc finger protein 273 2 2
MIRT642840 ZNF891 zinc finger protein 891 2 2
MIRT643694 KIAA0586 KIAA0586 2 2
MIRT644309 NFKBID NFKB inhibitor delta 2 2
MIRT644504 GTF2F1 general transcription factor IIF subunit 1 2 2
MIRT645171 NOL9 nucleolar protein 9 2 4
MIRT645728 POLR3A RNA polymerase III subunit A 2 2
MIRT646120 SLC26A9 solute carrier family 26 member 9 2 2
MIRT647725 CXCR2 C-X-C motif chemokine receptor 2 2 2
MIRT647991 PDE12 phosphodiesterase 12 2 2
MIRT648053 TRMT10C tRNA methyltransferase 10C, mitochondrial RNase P subunit 2 2
MIRT648172 TMEM192 transmembrane protein 192 2 2
MIRT648789 VPS8 VPS8, CORVET complex subunit 2 2
MIRT649285 NEK8 NIMA related kinase 8 2 2
MIRT649837 LIPG lipase G, endothelial type 2 2
MIRT650004 KLB klotho beta 2 2
MIRT650563 YIPF4 Yip1 domain family member 4 2 2
MIRT651782 UTP6 UTP6, small subunit processome component 2 2
MIRT652076 TSPAN14 tetraspanin 14 2 2
MIRT653397 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT654540 RAB3C RAB3C, member RAS oncogene family 2 2
MIRT655362 PCBD2 pterin-4 alpha-carbinolamine dehydratase 2 2 2
MIRT655386 PAPLN papilin, proteoglycan like sulfated glycoprotein 2 2
MIRT657139 ITGA1 integrin subunit alpha 1 2 2
MIRT657754 GMEB1 glucocorticoid modulatory element binding protein 1 2 2
MIRT658821 EEF1E1 eukaryotic translation elongation factor 1 epsilon 1 2 2
MIRT659082 DENR density regulated re-initiation and release factor 2 2
MIRT659106 DENND6A DENN domain containing 6A 2 2
MIRT659409 CORO2A coronin 2A 2 2
MIRT659829 CARHSP1 calcium regulated heat stable protein 1 2 2
MIRT660252 BLOC1S6 biogenesis of lysosomal organelles complex 1 subunit 6 2 2
MIRT660260 BLOC1S5 biogenesis of lysosomal organelles complex 1 subunit 5 2 4
MIRT660933 ACOX1 acyl-CoA oxidase 1 2 2
MIRT662986 TMEM59 transmembrane protein 59 2 2
MIRT663064 SFR1 SWI5 dependent homologous recombination repair protein 1 2 2
MIRT663256 ATP1A2 ATPase Na+/K+ transporting subunit alpha 2 2 2
MIRT663583 C10orf32 BLOC-1 related complex subunit 7 2 2
MIRT663755 ZNF285 zinc finger protein 285 2 2
MIRT664135 ZMIZ2 zinc finger MIZ-type containing 2 2 2
MIRT665143 PTK6 protein tyrosine kinase 6 2 2
MIRT665394 WEE1 WEE1 G2 checkpoint kinase 2 2
MIRT665978 SYT11 synaptotagmin 11 2 2
MIRT666186 SMCR8 Smith-Magenis syndrome chromosome region, candidate 8 2 2
MIRT666568 RHOBTB3 Rho related BTB domain containing 3 2 2
MIRT666772 PTGES3L prostaglandin E synthase 3 like 2 2
MIRT667018 PDF peptide deformylase, mitochondrial 2 2
MIRT667098 SLC25A2 solute carrier family 25 member 2 2 2
MIRT667134 NT5DC3 5'-nucleotidase domain containing 3 2 4
MIRT669790 GAN gigaxonin 2 2
MIRT669920 LRPAP1 LDL receptor related protein associated protein 1 2 2
MIRT669998 GPR156 G protein-coupled receptor 156 2 4
MIRT670291 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT670380 EMP2 epithelial membrane protein 2 2 2
MIRT670453 RSBN1L round spermatid basic protein 1 like 2 2
MIRT670564 GLTP glycolipid transfer protein 2 2
MIRT670859 IFNAR1 interferon alpha and beta receptor subunit 1 2 4
MIRT671055 KIF1B kinesin family member 1B 2 2
MIRT671078 ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 2 2
MIRT671299 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT671801 WISP3 WNT1 inducible signaling pathway protein 3 2 2
MIRT671851 APOL2 apolipoprotein L2 2 2
MIRT671950 SPPL3 signal peptide peptidase like 3 2 2
MIRT671990 OSTF1 osteoclast stimulating factor 1 2 2
MIRT672163 FANCF Fanconi anemia complementation group F 2 2
MIRT672267 SHE Src homology 2 domain containing E 2 2
MIRT672444 TTPAL alpha tocopherol transfer protein like 2 2
MIRT672870 TTC28 tetratricopeptide repeat domain 28 2 2
MIRT673643 CYCS cytochrome c, somatic 2 4
MIRT674049 ATXN3 ataxin 3 2 2
MIRT674240 NUP62 nucleoporin 62 2 2
MIRT674276 LMOD3 leiomodin 3 2 2
MIRT674430 MIOX myo-inositol oxygenase 2 4
MIRT674473 BCL2L15 BCL2 like 15 2 2
MIRT674493 TIRAP TIR domain containing adaptor protein 2 2
MIRT674846 GINM1 glycoprotein integral membrane 1 2 2
MIRT675706 EMC3 ER membrane protein complex subunit 3 2 2
MIRT675972 FAM126B family with sequence similarity 126 member B 2 2
MIRT676235 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT676737 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT677426 DDX19B DEAD-box helicase 19B 2 2
MIRT677454 PDLIM3 PDZ and LIM domain 3 2 2
MIRT677576 TRIM65 tripartite motif containing 65 2 2
MIRT677639 HAUS2 HAUS augmin like complex subunit 2 2 2
MIRT677827 TSPYL1 TSPY like 1 2 2
MIRT678937 MYADM myeloid associated differentiation marker 2 2
MIRT680405 SFT2D2 SFT2 domain containing 2 2 2
MIRT680475 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT683260 ZNF329 zinc finger protein 329 2 2
MIRT683564 CARD8 caspase recruitment domain family member 8 2 2
MIRT683812 CBS cystathionine-beta-synthase 2 2
MIRT684532 ZNF460 zinc finger protein 460 2 2
MIRT684939 PLA2G16 phospholipase A2 group XVI 2 2
MIRT685127 MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3 2 2
MIRT685164 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 2
MIRT685429 PM20D2 peptidase M20 domain containing 2 2 2
MIRT685437 SLC10A6 solute carrier family 10 member 6 2 2
MIRT685676 TRIM45 tripartite motif containing 45 2 2
MIRT685991 NEK4 NIMA related kinase 4 2 2
MIRT687311 OTUD7B OTU deubiquitinase 7B 2 2
MIRT687535 MOB1B MOB kinase activator 1B 2 2
MIRT687710 KLF2 Kruppel like factor 2 2 2
MIRT687902 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT688044 GLUL glutamate-ammonia ligase 2 2
MIRT688891 C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 2 2
MIRT689242 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT689519 ORC6 origin recognition complex subunit 6 2 2
MIRT689582 NUDT7 nudix hydrolase 7 2 2
MIRT689611 AKAP6 A-kinase anchoring protein 6 2 2
MIRT689665 RBM23 RNA binding motif protein 23 2 2
MIRT689911 ACOT13 acyl-CoA thioesterase 13 2 2
MIRT690005 LUZP2 leucine zipper protein 2 2 2
MIRT690027 CCDC90B coiled-coil domain containing 90B 2 2
MIRT690309 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690503 MDM2 MDM2 proto-oncogene 2 2
MIRT691056 CRCP CGRP receptor component 2 2
MIRT691441 CXorf36 chromosome X open reading frame 36 2 2
MIRT691918 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT692269 GPR157 G protein-coupled receptor 157 2 2
MIRT692631 SUSD1 sushi domain containing 1 2 2
MIRT693378 ZNF528 zinc finger protein 528 2 2
MIRT693858 IYD iodotyrosine deiodinase 2 2
MIRT693971 ZNF70 zinc finger protein 70 2 2
MIRT694137 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT694288 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT694608 CXorf56 chromosome X open reading frame 56 2 2
MIRT694988 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT695160 TCTN2 tectonic family member 2 2 2
MIRT695359 PHAX phosphorylated adaptor for RNA export 2 2
MIRT695538 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 2
MIRT695884 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT696015 TYRO3 TYRO3 protein tyrosine kinase 2 2
MIRT696052 ZNF264 zinc finger protein 264 2 2
MIRT696119 GLP2R glucagon like peptide 2 receptor 2 2
MIRT696154 SLC11A2 solute carrier family 11 member 2 2 2
MIRT696158 TIPIN TIMELESS interacting protein 2 2
MIRT696295 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT696394 CORO7 coronin 7 2 2
MIRT696675 APOC3 apolipoprotein C3 2 2
MIRT696696 PNPO pyridoxamine 5'-phosphate oxidase 2 2
MIRT696742 RBM28 RNA binding motif protein 28 2 2
MIRT696842 WDR13 WD repeat domain 13 2 2
MIRT697179 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT697876 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT698134 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT698352 TMEM127 transmembrane protein 127 2 2
MIRT698698 TBC1D15 TBC1 domain family member 15 2 2
MIRT698824 STARD7 StAR related lipid transfer domain containing 7 2 2
MIRT699111 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT699657 SGPL1 sphingosine-1-phosphate lyase 1 2 2
MIRT699845 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT699954 RSBN1 round spermatid basic protein 1 2 2
MIRT700447 PURB purine rich element binding protein B 2 2
MIRT700887 PER2 period circadian clock 2 2 2
MIRT700906 PDXK pyridoxal kinase 2 2
MIRT701001 PCSK6 proprotein convertase subtilisin/kexin type 6 2 2
MIRT701082 PAPOLG poly(A) polymerase gamma 2 2
MIRT701138 PANK1 pantothenate kinase 1