miRTarBase - #MIRT280390


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pre-miRNA Information
pre-miRNA hsa-mir-511   
Genomic Coordinates chr10: 17845107 - 17845193
Description Homo sapiens miR-511 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-511-3p
Sequence 54| AAUGUGUAGCAAAAGACAGA |73
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30502461 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs548691953 3 dbSNP
rs1322530388 4 dbSNP
rs1313209508 11 dbSNP
rs1223031412 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CALM1   
Synonyms CALML2, CAMI, CPVT4, DD132, LQT14, PHKD, caM
Description calmodulin 1
Transcript NM_006888   
Expression
Putative miRNA Targets on CALM1
3'UTR of CALM1
(miRNA target sites are highlighted)		 
>CALM1|NM_006888|3'UTR
   1 AGACCTACTTTCAACTCCTTTTTCCCCCCTCTAGAAGAATCAAATTGAATCTTTTACTTACCTCTTGCAAAAAAAAGAAA
  81 AAAGAAAAAAGTTCATTTATTCATTCTGTTTCTATATAGCAAAACTGAATGTCAAAAGTACCTTCTGTCCACACACACAA
 161 AATCTGCATGTATTGGTTGGTGGTCCTGTCCCCTAAAGATCAAGCTACACATCAGTTTTACAATATAAATACTTGTACTA
 241 CCTTAATGATAAGGACTCCTTAAAGTTCCATTTGCTAATGATTAATACACTGTTTGGGCTGGCCAGTTTTTCATGCATGC
 321 AGCTTGACGATTGAGCACAGTCAGGCCTTTGTATTAAAAATGAAAAATGAAAAAACAAATTCAAAACCTATTCAAATGGG
 401 TTCTAGTTCAATTTGTTTAGTATAAATTGTCATAGCTGGTTTACTGAAAACAAACACATTTAAAATTGGTTTACCTCAGG
 481 ATGACGTGCAGAAAAATGGGTGAAGGATAAACCGTTGAGACGTGGCCCCACTGGTAGGATGGTCCTCTTGTACTTCGTGT
 561 GCTCCGACCCATGGTGACGATGACACACCCTGGTGGCATGCCCGTGTATGTTGGTTTAGCGTTGTCTGCATTGTTCTAGA
 641 GTGAAACAGGTGTCAGGCTGTCACTGTTCACACAAATTTTTAATAAGAAACATTTACCAAGGGAGCATCTTTGGACTCTC
 721 TGTTTTTAAAACCTTCTGAACCATGACTTGGAGCCGGCAGAGTAGGCTGTGGCTGTGGACTTCAGCACAACCATCAACAT
 801 TGCTGTTCAAAGAAATTACAGTTTACGTCCATTCCAAGTTGTAAATGCTAGTCTTTTTTTTTTTTTTTCCAATAAAAAGA
 881 CCATTAACTTAAAGTGGTGTTAAATGCTTTGTAAAGCTGAGATCTAAATGGGGACAAGGCAGGTGGAGGGGAGGCCAGTG
 961 TACATGTAAATGCCCACAGCCCAGCATTGGGTTTCCCTCCCAAGGCCCCAGCACCAACCTCTGAGCCCAAGACCTTGCCT
1041 GAAAACAAGCAGATACCGATTGCTTCATCCTATTTATGGACATGTAGGTCTAGTTGCATTTTCACTGGGGGGAGGGGGGA
1121 AGGTGAATTATGGTAACTTTTAATGATCTATTCAGGCAGTAGAGCTCTTAAGGAAAAAAAAAAACCCACTTTCTCTCAAG
1201 CATGTATTTAGGGGTTGTTCTCAATTGTGCTGCTGATTACCTGTCTTATGTAACTACTTGAGACCATCTGCAAGAGACAT
1281 GATTTAGTGTGTCTGTAATTCAATCTTCGCTGTGTGTGGTAGAAGCAGTAGTCACTTTTGTAAGCCAGTCTCTTCATGCC
1361 TAAAAGACACTACCAGTCACCTTTGATTCGCGACTTTTAATTTATGATTATACTTAGCCTCCTCCTCCTTTTTTTTTTTT
1441 TCCCAAGTTGACTTGACTTTGCTTTTTTCCCCCCAAGTAGAACTAATGCTAGCTTCCAGCTTGAAAGTAAAACTCCAGTG
1521 TGGAGTGAATTTTGTGTCTAATTATAAACCTGTAACCAAAACTCAGACATCTGGTACTGGTCTTTGCATTGAGATTGGTC
1601 CCTGTAAAACCCCCTTTAAAAGCATATTGCATTTAGTACAGAGCTCTTTTTTGAAATGAAGGCTGGAGATGTGCATTTTT
1681 CACGGTGTTAACTGGTTGTATCTTATTAGCAAGGAGATTGGGGTTTTGAGTGTTTGCGTGGGTGGTTTCAATTTGCCAGG
1761 GAACAGTGGCAGGCTGCTAGCAAGGCAGTGAGAAGCTCTTGGCAGCCAAATGGGTGCATTCAGGGCTGATTTATAGAGAC
1841 CCTTGGCTTCTCCTTCTCCTACTCCCTGTCTTTCTGGCATTTTGTAGCTTGTTAGATTTTCTGCCAGAGGGGTGGGTCAG
1921 AGCAGTGGAGGGGAGACATCGCCCATGTGCTTCTGCTACTGGTCCTTGGGCTGGGTGGTTGGTAGAGGAGATGTTGACAC
2001 TATGAGCTAAGGGTTGGCTTTTGTAATTACCTGAATCTGAAAGGAATGCCTAAGGTTACCTTGGGGTTTCTCTTCTGGTG
2081 AGATAGGGTTCCTGGTTTGAGTAAGTTAATGTCCTGGATATTTCTTGTGGCAGGGGGTGGTCAAAGAGCCTGATTGCTGA
2161 CCCAGTCTCAGGCCTGTGGTCGATGACCTCTCGGTAGTTTCAAAGGGGGCTGGAGGGGGATATTTGACTTGTTTTTTCGA
2241 AATGTAGCCTTCTAACCCTCAAGTCTTTAGAAGCTGGGTGGACTCTTAGTGGTCCTGCAGCGTATCCTAAAAGACTACCT
2321 TTGAAACAGGATTCTTGTATGGCCAGGATCCTGTCTGGGAACCAGAAACCCTACACCCTCCCCCTCCAGGGAATGCTGAG
2401 TTCCAGTTTTGAGCAGAGGTGAGGCAGAATCCACTGTAGCCTTCCGCCCTGGTATTTGGGGGGATGACCAGCCCAGGCGT
2481 TGGGTGTTAGTCTGCATGAGTTTGTGAGAGGAAATAGCTGGGTGTCCTGGCAGTGCCCTTGAAGTTGGTTAGGACCTTCC
2561 TGTAAACTCTTGCCCCTACTTCTAACTACTCTATAAATATATACATATATTTATATATAAAGTGATTAGTTGAACTGGCA
2641 TCCTGCTTTAGCCTGAGACTTGCCATAAGAAACTGCTGAGTACTTGGCAAACCCTTTCATAGTTTTGTTCTCCATCTGTT
2721 TGGGGTAGGTGTTGAGCGAGGCAAATGGATCTCGATATTTCAGATGGGCTTTTGATGCACTGTTGCCAAGGAAGGCTTTT
2801 TCTGATTTTTTGACAAATGAATTTTTGCACACTTTCATTGGTGTCTTTCGGCAACTTACACACATTGAAAATGAGCTATT
2881 GTACATATTTTTATATTCTCTTTATAAATGCATGTCTGATTGTACTTGTAACAATATTGTAATGAACGGCTGTGCAGTAG
2961 GCCCAGCGCTGCTGTGTCTCGTCAGAGGAATAGCTTACCACGAACCCCTCAGCATACTGGGAATCTCTTCCTGAACAACG
3041 AATGTAAATTTGGTCAAGTCTACTCTTCCGTTCATTCAATTATTTTAAGCATTTGAATTATTTATTGTATATCCTAAATA
3121 TATTTCTCCTTTGGCAGTGACTAGATTTCCACTAATGTGTCTTAATCTATCCCTCCAGCTGGCAGTTACTGTTTTTTTAA
3201 TCCCCTGAAGTTGTCCTGTAGGAGACAGAAATTCTTTGCTGTCTGTATCCCTTGGAGTAAGAAGGTAGTGGCATGGGTGG
3281 AGTGTGTGTTCTTTCTCCAAATCTATTATGATGTTTATTAAACACTTCTGTAGCAAAGATGGTGGTAGTTCTTTTGTTAC
3361 TGAAGTTGCCCTTCACCATGGCTATTTGAAAAGGAGATGTACTTGGACGTTTCTGTAAATCTTGAGATAAACTGTTTGGA
3441 GATTTAACCACCTCTCTGATGGGGGACCAACTCTATGGAAATTGTAAATACGTTTTATTTATAAACCTGGCACTGTATTC
3521 AATAAACATTTCTGCAGCCTTTCATCTCTAACTGCGAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agacagaaaaCGAUGUGUAa 5'
                    ||||||||| 
Target 5' taaagatcaaGCTACACATc 3'
 194 - 213 150.00 -11.50
2 
miRNA  3' agACAGAAAAC-----GAUGUGUaa 5'
            ||||||| |     :||||||  
Target 5' ggTGTCTTTCGGCAACTTACACAca 3'
 2840 - 2864 142.00 -11.50
3 
miRNA  3' agacaGAAAACGAUGUGUAa 5'
               || ||| ||||:|| 
Target 5' atgagCTATTG-TACATATt 3'
 2871 - 2889 138.00 -8.30
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30114855 3 COSMIC
COSN30491303 24 COSMIC
COSN30137726 25 COSMIC
COSN30686839 30 COSMIC
COSN13600291 48 COSMIC
COSN20042162 77 COSMIC
COSN30500530 91 COSMIC
COSN31583561 95 COSMIC
COSN22240406 107 COSMIC
COSN22812807 107 COSMIC
COSN31602261 107 COSMIC
COSN30163183 146 COSMIC
COSN507382 163 COSMIC
COSN31566864 199 COSMIC
COSN31558647 229 COSMIC
COSN26566377 487 COSMIC
COSN20961601 503 COSMIC
COSN26639038 515 COSMIC
COSN20092874 626 COSMIC
COSN1666005 747 COSMIC
COSN31535529 768 COSMIC
COSN26553721 770 COSMIC
COSN26557118 778 COSMIC
COSN31489938 809 COSMIC
COSN20111593 869 COSMIC
COSN31515237 887 COSMIC
COSN30163334 1133 COSMIC
COSN31550390 1144 COSMIC
COSN31484462 1173 COSMIC
COSN20111596 1185 COSMIC
COSN29052021 1185 COSMIC
COSN7033355 1200 COSMIC
COSN31549330 1309 COSMIC
COSN26643237 1336 COSMIC
COSN26563578 1359 COSMIC
COSN31488835 1386 COSMIC
COSN31553680 1390 COSMIC
COSN27491631 1442 COSMIC
COSN31576081 1442 COSMIC
COSN28717642 1445 COSMIC
COSN30163135 1451 COSMIC
COSN31539901 1552 COSMIC
COSN7033356 1729 COSMIC
COSN31526769 1738 COSMIC
COSN1666006 1842 COSMIC
COSN6639380 1958 COSMIC
COSN30539533 2445 COSMIC
COSN19287565 2518 COSMIC
COSN25304250 2693 COSMIC
COSN26555973 2737 COSMIC
COSN28777170 2738 COSMIC
COSN30176052 2755 COSMIC
COSN27107756 2832 COSMIC
COSN31564517 2834 COSMIC
COSN20111602 2862 COSMIC
COSN31523298 2883 COSMIC
COSN25755997 2951 COSMIC
COSN31521115 2963 COSMIC
COSN31553572 2988 COSMIC
COSN8461533 3054 COSMIC
COSN26214550 3071 COSMIC
COSN23665060 3096 COSMIC
COSN25382296 3102 COSMIC
COSN26819405 3183 COSMIC
COSN29376085 3208 COSMIC
COSN30544976 3255 COSMIC
COSN15622583 3389 COSMIC
COSN30172309 3440 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1263871978 5 dbSNP
rs1485028560 10 dbSNP
rs201339726 12 dbSNP
rs1419484517 13 dbSNP
rs200742588 19 dbSNP
rs764788561 19 dbSNP
rs771205814 20 dbSNP
rs1157994685 23 dbSNP
rs1282769586 24 dbSNP
rs763520155 24 dbSNP
rs773900819 24 dbSNP
rs372713000 25 dbSNP
rs762853339 26 dbSNP
rs763765452 29 dbSNP
rs1361762430 30 dbSNP
rs1302326630 31 dbSNP
rs774374702 33 dbSNP
rs1042201210 37 dbSNP
rs761607101 38 dbSNP
rs767149313 43 dbSNP
rs749886625 44 dbSNP
rs1288754394 48 dbSNP
rs1420859432 50 dbSNP
rs1306646091 52 dbSNP
rs1200345525 58 dbSNP
rs904584340 60 dbSNP
rs1453335921 68 dbSNP
rs1000619625 69 dbSNP
rs1028979485 69 dbSNP
rs1377826600 69 dbSNP
rs1486969296 71 dbSNP
rs563744062 71 dbSNP
rs865857285 77 dbSNP
rs1217191130 78 dbSNP
rs1489218509 81 dbSNP
rs1278157853 85 dbSNP
rs1208811802 90 dbSNP
rs1189440071 95 dbSNP
rs1256741249 95 dbSNP
rs1420910569 98 dbSNP
rs1324998419 105 dbSNP
rs953362121 107 dbSNP
rs1401031154 115 dbSNP
rs1342931437 119 dbSNP
rs1311652300 121 dbSNP
rs1427494694 126 dbSNP
rs1402304659 133 dbSNP
rs1173931322 136 dbSNP
rs111354847 158 dbSNP
rs1460175861 161 dbSNP
rs1372199494 169 dbSNP
rs764770365 176 dbSNP
rs1194078692 181 dbSNP
rs1478718941 183 dbSNP
rs1170713760 186 dbSNP
rs1255304651 191 dbSNP
rs1187141502 205 dbSNP
rs1441873038 206 dbSNP
rs1374539234 207 dbSNP
rs1202298292 224 dbSNP
rs532682622 236 dbSNP
rs1219617110 252 dbSNP
rs1320457570 253 dbSNP
rs1312100782 262 dbSNP
rs1447986464 263 dbSNP
rs780745158 266 dbSNP
rs1340501065 270 dbSNP
rs1375956440 271 dbSNP
rs183167213 278 dbSNP
rs367695382 284 dbSNP
rs1399090334 286 dbSNP
rs552007165 291 dbSNP
rs972551489 293 dbSNP
rs1415433211 300 dbSNP
rs1162531440 310 dbSNP
rs559735109 315 dbSNP
rs528779045 318 dbSNP
rs371446473 329 dbSNP
rs533915870 336 dbSNP
rs1189697365 338 dbSNP
rs1298039988 346 dbSNP
rs1199508600 347 dbSNP
rs1459341460 353 dbSNP
rs984262584 356 dbSNP
rs1233995896 362 dbSNP
rs1281545802 372 dbSNP
rs1286535036 377 dbSNP
rs1350663383 377 dbSNP
rs1215102742 380 dbSNP
rs1260323512 383 dbSNP
rs1236237935 388 dbSNP
rs773057990 401 dbSNP
rs926969408 412 dbSNP
rs5871 418 dbSNP
rs1186694000 419 dbSNP
rs1263376252 425 dbSNP
rs1431132723 430 dbSNP
rs530389113 433 dbSNP
rs1057414872 435 dbSNP
rs1156754164 445 dbSNP
rs917470189 447 dbSNP
rs1379799501 448 dbSNP
rs755165762 448 dbSNP
rs1179441865 450 dbSNP
rs1459244299 454 dbSNP
rs1395523375 457 dbSNP
rs1221290686 477 dbSNP
rs1452606209 481 dbSNP
rs1436449017 485 dbSNP
rs1156784403 486 dbSNP
rs530186692 487 dbSNP
rs1431600819 488 dbSNP
rs868135228 489 dbSNP
rs1273937428 496 dbSNP
rs1290761883 499 dbSNP
rs904676561 506 dbSNP
rs1419049123 514 dbSNP
rs1000309999 515 dbSNP
rs1159300930 516 dbSNP
rs112958092 522 dbSNP
rs889151758 525 dbSNP
rs1350508514 528 dbSNP
rs544427397 528 dbSNP
rs1248852465 531 dbSNP
rs570189898 532 dbSNP
rs1192012786 535 dbSNP
rs1238560220 546 dbSNP
rs1284203496 548 dbSNP
rs539201447 553 dbSNP
rs1019495354 557 dbSNP
rs965298976 558 dbSNP
rs994418259 560 dbSNP
rs1369405821 563 dbSNP
rs1268177413 565 dbSNP
rs1399214006 566 dbSNP
rs1025502855 567 dbSNP
rs553131100 570 dbSNP
rs1215839812 572 dbSNP
rs867583969 579 dbSNP
rs1421530048 599 dbSNP
rs1357507460 602 dbSNP
rs566502836 604 dbSNP
rs927021519 605 dbSNP
rs1427573753 608 dbSNP
rs772210108 610 dbSNP
rs1477731816 614 dbSNP
rs1192105722 619 dbSNP
rs1196471970 621 dbSNP
rs1481964364 621 dbSNP
rs187714594 622 dbSNP
rs992454433 631 dbSNP
rs748755950 636 dbSNP
rs1313560675 657 dbSNP
rs773431923 670 dbSNP
rs1270534708 685 dbSNP
rs1253327876 692 dbSNP
rs1455448630 700 dbSNP
rs1217777407 701 dbSNP
rs1318351359 707 dbSNP
rs751157343 716 dbSNP
rs1412891771 719 dbSNP
rs1377004093 721 dbSNP
rs1302304027 726 dbSNP
rs1042343898 733 dbSNP
rs1448933177 733 dbSNP
rs1168806299 736 dbSNP
rs1059285 737 dbSNP
rs745709869 743 dbSNP
rs1424822448 744 dbSNP
rs1477065415 752 dbSNP
rs1193135105 754 dbSNP
rs1407136050 756 dbSNP
rs1422562820 757 dbSNP
rs1413757648 759 dbSNP
rs936161305 761 dbSNP
rs1401260367 774 dbSNP
rs139060064 775 dbSNP
rs1050479419 777 dbSNP
rs199697317 780 dbSNP
rs1348217622 785 dbSNP
rs1197630964 800 dbSNP
rs1458015683 809 dbSNP
rs547178830 818 dbSNP
rs944726129 822 dbSNP
rs1321044078 828 dbSNP
rs1411721171 835 dbSNP
rs1313422519 839 dbSNP
rs1040321491 850 dbSNP
rs1329508507 852 dbSNP
rs1373583763 852 dbSNP
rs1491009650 854 dbSNP
rs35149335 854 dbSNP
rs370254226 854 dbSNP
rs71823341 854 dbSNP
rs878909286 854 dbSNP
rs897805801 855 dbSNP
rs1444993202 863 dbSNP
rs56856377 869 dbSNP
rs994120358 869 dbSNP
rs111860684 870 dbSNP
rs1025979420 873 dbSNP
rs1226032623 874 dbSNP
rs1308448270 881 dbSNP
rs973863184 900 dbSNP
rs1265883446 930 dbSNP
rs1029121754 933 dbSNP
rs1223715170 951 dbSNP
rs1307146029 955 dbSNP
rs1361615521 955 dbSNP
rs1239570262 973 dbSNP
rs1309501007 978 dbSNP
rs953578251 981 dbSNP
rs868196120 984 dbSNP
rs1459919059 985 dbSNP
rs1034102588 986 dbSNP
rs1157521487 998 dbSNP
rs1212642250 999 dbSNP
rs1419838791 1000 dbSNP
rs958415591 1006 dbSNP
rs1196311504 1008 dbSNP
rs1273450596 1018 dbSNP
rs1469575933 1020 dbSNP
rs1267813609 1021 dbSNP
rs992564296 1024 dbSNP
rs1202143019 1027 dbSNP
rs1215973999 1031 dbSNP
rs1232160067 1034 dbSNP
rs1023998312 1035 dbSNP
rs1470437329 1037 dbSNP
rs11541170 1038 dbSNP
rs116646015 1039 dbSNP
rs1407190456 1040 dbSNP
rs1339068796 1047 dbSNP
rs977738212 1047 dbSNP
rs1474934234 1050 dbSNP
rs1400008465 1052 dbSNP
rs775475803 1057 dbSNP
rs926166065 1058 dbSNP
rs566991630 1063 dbSNP
rs1396918451 1064 dbSNP
rs1464321143 1067 dbSNP
rs1177965152 1068 dbSNP
rs539314406 1071 dbSNP
rs1194314514 1073 dbSNP
rs1355497118 1074 dbSNP
rs1263972701 1078 dbSNP
rs773738101 1080 dbSNP
rs1059296 1083 dbSNP
rs1256869457 1084 dbSNP
rs1043237868 1085 dbSNP
rs1316450950 1086 dbSNP
rs1278074634 1091 dbSNP
rs1401167587 1094 dbSNP
rs571231281 1095 dbSNP
rs1328755956 1104 dbSNP
rs1331586704 1105 dbSNP
rs1395010217 1106 dbSNP
rs1282979641 1107 dbSNP
rs1402457152 1108 dbSNP
rs927021579 1109 dbSNP
rs1232127844 1110 dbSNP
rs1293417884 1111 dbSNP
rs1463805016 1114 dbSNP
rs1422695546 1116 dbSNP
rs1171246617 1123 dbSNP
rs1478751477 1124 dbSNP
rs1336489822 1125 dbSNP
rs1212503453 1127 dbSNP
rs1366689902 1130 dbSNP
rs1271938881 1132 dbSNP
rs1441927682 1134 dbSNP
rs771769159 1138 dbSNP
rs557426524 1141 dbSNP
rs373356188 1145 dbSNP
rs1206478641 1147 dbSNP
rs1257798426 1147 dbSNP
rs1255291338 1149 dbSNP
rs1219675584 1150 dbSNP
rs937186861 1153 dbSNP
rs897864120 1154 dbSNP
rs1283005779 1156 dbSNP
rs929289734 1158 dbSNP
rs767099585 1162 dbSNP
rs1340556480 1170 dbSNP
rs1485324847 1172 dbSNP
rs61989066 1173 dbSNP
rs11287138 1174 dbSNP
rs1162590440 1174 dbSNP
rs1388412963 1174 dbSNP
rs1397914976 1174 dbSNP
rs1444158672 1174 dbSNP
rs398026137 1174 dbSNP
rs796531293 1174 dbSNP
rs80212837 1174 dbSNP
rs63576962 1175 dbSNP
rs77928599 1176 dbSNP
rs1185551918 1178 dbSNP
rs1188737110 1181 dbSNP
rs1420181616 1183 dbSNP
rs1046980822 1185 dbSNP
rs77916091 1185 dbSNP
rs888321544 1186 dbSNP
rs78459823 1188 dbSNP
rs537067617 1191 dbSNP
rs550258141 1193 dbSNP
rs546027337 1194 dbSNP
rs1412023851 1196 dbSNP
rs146008731 1198 dbSNP
rs566927479 1207 dbSNP
rs1332664931 1210 dbSNP
rs1036374322 1212 dbSNP
rs577869504 1214 dbSNP
rs542421057 1217 dbSNP
rs1309609055 1221 dbSNP
rs894295198 1225 dbSNP
rs1322754136 1228 dbSNP
rs1014053088 1239 dbSNP
rs1428166856 1242 dbSNP
rs756612040 1247 dbSNP
rs1418000538 1249 dbSNP
rs766834997 1249 dbSNP
rs994848297 1250 dbSNP
rs779602014 1252 dbSNP
rs754195886 1253 dbSNP
rs1029061026 1255 dbSNP
rs1347037681 1256 dbSNP
rs1294674762 1258 dbSNP
rs1213812117 1259 dbSNP
rs562014471 1267 dbSNP
rs1352335281 1268 dbSNP
rs953442612 1280 dbSNP
rs1033288041 1281 dbSNP
rs115723958 1283 dbSNP
rs986330264 1284 dbSNP
rs910743065 1290 dbSNP
rs1296278461 1291 dbSNP
rs202213644 1294 dbSNP
rs550143538 1294 dbSNP
rs1360018646 1299 dbSNP
rs569391058 1300 dbSNP
rs376504500 1304 dbSNP
rs138659409 1305 dbSNP
rs988758732 1306 dbSNP
rs777867407 1309 dbSNP
rs769065551 1310 dbSNP
rs1394918789 1311 dbSNP
rs1271612848 1313 dbSNP
rs915492632 1314 dbSNP
rs968823356 1319 dbSNP
rs1376689487 1320 dbSNP
rs1242165916 1323 dbSNP
rs978411384 1330 dbSNP
rs1217357978 1335 dbSNP
rs1310069596 1336 dbSNP
rs536004332 1336 dbSNP
rs1380004822 1339 dbSNP
rs927058488 1340 dbSNP
rs941282060 1348 dbSNP
rs75951656 1351 dbSNP
rs1341108355 1354 dbSNP
rs1326647300 1356 dbSNP
rs1055718383 1357 dbSNP
rs758479401 1364 dbSNP
rs1470483388 1365 dbSNP
rs1014064411 1369 dbSNP
rs192521929 1371 dbSNP
rs1477761101 1377 dbSNP
rs1420931499 1382 dbSNP
rs1187750981 1386 dbSNP
rs778008342 1390 dbSNP
rs183678923 1391 dbSNP
rs369307361 1392 dbSNP
rs1204600656 1398 dbSNP
rs998547703 1403 dbSNP
rs1255894201 1405 dbSNP
rs1285127773 1411 dbSNP
rs899077578 1417 dbSNP
rs774383133 1418 dbSNP
rs995277203 1419 dbSNP
rs1377081115 1420 dbSNP
rs3814846 1421 dbSNP
rs889218884 1424 dbSNP
rs71461906 1427 dbSNP
rs1195944762 1428 dbSNP
rs1329717937 1428 dbSNP
rs61989067 1428 dbSNP
rs1173166833 1429 dbSNP
rs398043959 1429 dbSNP
rs71461907 1429 dbSNP
rs966188658 1429 dbSNP
rs1412474189 1430 dbSNP
rs200711428 1430 dbSNP
rs75202062 1431 dbSNP
rs1157467525 1438 dbSNP
rs1480845807 1442 dbSNP
rs764882885 1442 dbSNP
rs1385066584 1443 dbSNP
rs3814845 1445 dbSNP
rs538185073 1447 dbSNP
rs1385246190 1448 dbSNP
rs1307366340 1451 dbSNP
rs937986933 1455 dbSNP
rs1055728627 1458 dbSNP
rs1300368584 1461 dbSNP
rs1393397126 1462 dbSNP
rs915794321 1463 dbSNP
rs1163661118 1464 dbSNP
rs1426073900 1467 dbSNP
rs949884190 1468 dbSNP
rs1045947594 1469 dbSNP
rs557387970 1469 dbSNP
rs1333907620 1470 dbSNP
rs558442683 1471 dbSNP
rs769638427 1472 dbSNP
rs1019079873 1474 dbSNP
rs999032700 1476 dbSNP
rs1352943791 1477 dbSNP
rs373565285 1478 dbSNP
rs1284096281 1489 dbSNP
rs575205129 1497 dbSNP
rs1317799282 1508 dbSNP
rs1309565447 1511 dbSNP
rs892835725 1514 dbSNP
rs1007144716 1519 dbSNP
rs775281394 1521 dbSNP
rs1304299040 1530 dbSNP
rs1406177484 1535 dbSNP
rs1358113774 1539 dbSNP
rs1157576895 1541 dbSNP
rs1453966778 1549 dbSNP
rs1017813736 1550 dbSNP
rs1272754671 1565 dbSNP
rs1469102035 1570 dbSNP
rs1201538933 1571 dbSNP
rs1215932301 1574 dbSNP
rs1009735273 1578 dbSNP
rs1418944869 1596 dbSNP
rs1183168810 1599 dbSNP
rs539829248 1603 dbSNP
rs1022993328 1611 dbSNP
rs1204673066 1613 dbSNP
rs1363829594 1615 dbSNP
rs1486314380 1632 dbSNP
rs375596643 1635 dbSNP
rs749020590 1644 dbSNP
rs985315932 1647 dbSNP
rs909263356 1651 dbSNP
rs959364483 1654 dbSNP
rs768507383 1658 dbSNP
rs1461705102 1664 dbSNP
rs762989853 1668 dbSNP
rs1317012221 1670 dbSNP
rs990797875 1675 dbSNP
rs1386601929 1681 dbSNP
rs141870617 1683 dbSNP
rs992541330 1684 dbSNP
rs1429762238 1685 dbSNP
rs1178384792 1691 dbSNP
rs1476783398 1693 dbSNP
rs542034392 1698 dbSNP
rs3814844 1699 dbSNP
rs1422916101 1700 dbSNP
rs940556820 1702 dbSNP
rs1192546023 1703 dbSNP
rs1429217931 1705 dbSNP
rs1264045559 1707 dbSNP
rs776382866 1714 dbSNP
rs1198982319 1718 dbSNP
rs544203217 1720 dbSNP
rs924477278 1723 dbSNP
rs1206037405 1724 dbSNP
rs1476538318 1731 dbSNP
rs934501830 1735 dbSNP
rs1327712068 1736 dbSNP
rs575531560 1738 dbSNP
rs1451432416 1739 dbSNP
rs1406414935 1743 dbSNP
rs561183918 1746 dbSNP
rs1335710715 1747 dbSNP
rs1395615038 1750 dbSNP
rs1235383944 1751 dbSNP
rs564452026 1762 dbSNP
rs1374889780 1767 dbSNP
rs532760054 1775 dbSNP
rs1444226739 1776 dbSNP
rs1480527827 1784 dbSNP
rs889083320 1785 dbSNP
rs944701803 1790 dbSNP
rs866590730 1802 dbSNP
rs1456718604 1806 dbSNP
rs1485000755 1807 dbSNP
rs1040476221 1819 dbSNP
rs1196905409 1826 dbSNP
rs1263131193 1829 dbSNP
rs773056073 1829 dbSNP
rs998216494 1830 dbSNP
rs1383055323 1832 dbSNP
rs530199227 1835 dbSNP
rs369706187 1840 dbSNP
rs1026559753 1841 dbSNP
rs186848664 1843 dbSNP
rs1461273872 1850 dbSNP
rs1006350838 1853 dbSNP
rs1413107264 1853 dbSNP
rs559970665 1856 dbSNP
rs959416813 1856 dbSNP
rs1412916815 1857 dbSNP
rs1010178768 1859 dbSNP
rs1312289805 1863 dbSNP
rs535805623 1867 dbSNP
rs560712781 1869 dbSNP
rs35418035 1871 dbSNP
rs754281618 1879 dbSNP
rs1232642582 1888 dbSNP
rs1002417158 1889 dbSNP
rs1440056392 1909 dbSNP
rs1265952018 1913 dbSNP
rs1034022829 1916 dbSNP
rs981797700 1917 dbSNP
rs1359543263 1919 dbSNP
rs1293446733 1921 dbSNP
rs958392170 1928 dbSNP
rs1228576563 1931 dbSNP
rs924517041 1933 dbSNP
rs1349572960 1938 dbSNP
rs1253520970 1939 dbSNP
rs1279892565 1941 dbSNP
rs992490286 1942 dbSNP
rs374437556 1950 dbSNP
rs1302472819 1951 dbSNP
rs3814843 1953 dbSNP
rs1417614023 1957 dbSNP
rs961794722 1959 dbSNP
rs1399144007 1960 dbSNP
rs1407617914 1963 dbSNP
rs139692985 1965 dbSNP
rs1485732243 1967 dbSNP
rs765709922 1979 dbSNP
rs1199371448 1982 dbSNP
rs1490357163 1985 dbSNP
rs772899629 1985 dbSNP
rs1038757399 1988 dbSNP
rs538040957 1989 dbSNP
rs1284531258 2000 dbSNP
rs1225189693 2001 dbSNP
rs1259187911 2002 dbSNP
rs920402748 2006 dbSNP
rs930571066 2008 dbSNP
rs1347364285 2012 dbSNP
rs192452102 2017 dbSNP
rs910467861 2027 dbSNP
rs1428792520 2029 dbSNP
rs1344771872 2032 dbSNP
rs1319235164 2037 dbSNP
rs1402763666 2043 dbSNP
rs1193610113 2044 dbSNP
rs1404395047 2050 dbSNP
rs886671594 2053 dbSNP
rs1432173738 2059 dbSNP
rs1184195391 2062 dbSNP
rs1006409192 2063 dbSNP
rs184803743 2086 dbSNP
rs895300982 2088 dbSNP
rs539419419 2098 dbSNP
rs892557783 2100 dbSNP
rs553357792 2111 dbSNP
rs1025053838 2115 dbSNP
rs149760583 2127 dbSNP
rs1361525170 2128 dbSNP
rs552878782 2129 dbSNP
rs555446195 2133 dbSNP
rs575394798 2136 dbSNP
rs370139244 2137 dbSNP
rs905583067 2139 dbSNP
rs1002363400 2140 dbSNP
rs1433132441 2147 dbSNP
rs1380912532 2149 dbSNP
rs1033969455 2150 dbSNP
rs955952670 2153 dbSNP
rs1470512912 2154 dbSNP
rs374154318 2163 dbSNP
rs555800715 2170 dbSNP
rs1168989314 2174 dbSNP
rs1013944641 2177 dbSNP
rs1419581628 2182 dbSNP
rs777819916 2183 dbSNP
rs1242210197 2188 dbSNP
rs766898078 2189 dbSNP
rs964506438 2193 dbSNP
rs751584532 2194 dbSNP
rs923007518 2195 dbSNP
rs189778902 2204 dbSNP
rs938351498 2209 dbSNP
rs181805019 2212 dbSNP
rs1380845482 2214 dbSNP
rs1314631893 2215 dbSNP
rs184371119 2219 dbSNP
rs1453778540 2220 dbSNP
rs942285111 2226 dbSNP
rs1192825804 2232 dbSNP
rs1442071974 2232 dbSNP
rs951921689 2239 dbSNP
rs367855711 2240 dbSNP
rs1384149442 2246 dbSNP
rs1163863338 2248 dbSNP
rs189147924 2251 dbSNP
rs181955035 2252 dbSNP
rs976507853 2265 dbSNP
rs1176449099 2266 dbSNP
rs1046918253 2269 dbSNP
rs549051896 2269 dbSNP
rs1454445031 2275 dbSNP
rs1207295612 2283 dbSNP
rs1357407004 2296 dbSNP
rs1291245378 2297 dbSNP
rs913863260 2302 dbSNP
rs753186849 2303 dbSNP
rs562579310 2307 dbSNP
rs1392678484 2328 dbSNP
rs1352244693 2329 dbSNP
rs906592878 2348 dbSNP
rs1440585202 2351 dbSNP
rs3179089 2352 dbSNP
rs999947606 2354 dbSNP
rs925354054 2356 dbSNP
rs938182872 2359 dbSNP
rs1304149509 2372 dbSNP
rs1055284576 2375 dbSNP
rs1208909726 2377 dbSNP
rs1402511126 2381 dbSNP
rs1364435354 2382 dbSNP
rs551620548 2385 dbSNP
rs1426134869 2394 dbSNP
rs1466891328 2395 dbSNP
rs1158091799 2403 dbSNP
rs1419474356 2405 dbSNP
rs1410015550 2411 dbSNP
rs1031029733 2421 dbSNP
rs1490179486 2424 dbSNP
rs571427538 2434 dbSNP
rs1253455985 2435 dbSNP
rs1489390129 2441 dbSNP
rs896761614 2442 dbSNP
rs1013800829 2446 dbSNP
rs527615587 2447 dbSNP
rs546667111 2453 dbSNP
rs1238698737 2454 dbSNP
rs1021464266 2457 dbSNP
rs1290702450 2459 dbSNP
rs566812543 2460 dbSNP
rs1283364098 2464 dbSNP
rs1382254848 2466 dbSNP
rs1287951256 2468 dbSNP
rs1161528774 2479 dbSNP
rs768477208 2480 dbSNP
rs1346718802 2485 dbSNP
rs1174041549 2488 dbSNP
rs993567577 2491 dbSNP
rs964517789 2501 dbSNP
rs1200163194 2503 dbSNP
rs1027429803 2509 dbSNP
rs1259868167 2510 dbSNP
rs1204798506 2514 dbSNP
rs1486344975 2519 dbSNP
rs951785313 2523 dbSNP
rs535467804 2524 dbSNP
rs1017366835 2530 dbSNP
rs1351986832 2533 dbSNP
rs1323440350 2536 dbSNP
rs1440595290 2537 dbSNP
rs1234705659 2540 dbSNP
rs1324190805 2545 dbSNP
rs866707769 2551 dbSNP
rs555409517 2552 dbSNP
rs954516687 2563 dbSNP
rs777873781 2574 dbSNP
rs567197188 2575 dbSNP
rs983590260 2577 dbSNP
rs965935881 2583 dbSNP
rs1178536787 2588 dbSNP
rs975989875 2590 dbSNP
rs1228439373 2592 dbSNP
rs1467605781 2594 dbSNP
rs941666227 2601 dbSNP
rs1289754193 2605 dbSNP
rs913798934 2607 dbSNP
rs1429336339 2608 dbSNP
rs1250206067 2610 dbSNP
rs1232315274 2612 dbSNP
rs1294361813 2620 dbSNP
rs1244234335 2621 dbSNP
rs1202674058 2623 dbSNP
rs916793184 2627 dbSNP
rs1250257343 2639 dbSNP
rs1202302254 2642 dbSNP
rs1227607274 2650 dbSNP
rs184950622 2654 dbSNP
rs1451583063 2664 dbSNP
rs200991845 2665 dbSNP
rs979821327 2666 dbSNP
rs925384995 2670 dbSNP
rs1389581288 2673 dbSNP
rs1395755524 2674 dbSNP
rs938056927 2677 dbSNP
rs1046529222 2689 dbSNP
rs1055304847 2695 dbSNP
rs918058450 2700 dbSNP
rs1255504936 2701 dbSNP
rs1161925052 2707 dbSNP
rs906680011 2711 dbSNP
rs11539544 2713 dbSNP
rs1244109167 2714 dbSNP
rs1190125705 2723 dbSNP
rs1436576580 2732 dbSNP
rs1058903 2738 dbSNP
rs1037327391 2739 dbSNP
rs1483763515 2742 dbSNP
rs897382557 2754 dbSNP
rs772075894 2755 dbSNP
rs993207717 2758 dbSNP
rs893817035 2764 dbSNP
rs772851486 2765 dbSNP
rs887545982 2767 dbSNP
rs1007224721 2777 dbSNP
rs1335026049 2779 dbSNP
rs1329468150 2797 dbSNP
rs781024911 2798 dbSNP
rs1301430658 2800 dbSNP
rs1408548505 2802 dbSNP
rs1414883971 2806 dbSNP
rs558364735 2820 dbSNP
rs1363679808 2821 dbSNP
rs964571014 2822 dbSNP
rs1473880809 2833 dbSNP
rs996484521 2835 dbSNP
rs1017397850 2836 dbSNP
rs1490409726 2837 dbSNP
rs1291580748 2838 dbSNP
rs578181661 2844 dbSNP
rs1349712846 2850 dbSNP
rs367644606 2851 dbSNP
rs150072386 2858 dbSNP
rs997755007 2858 dbSNP
rs1230132434 2866 dbSNP
rs1020893060 2873 dbSNP
rs1413749130 2882 dbSNP
rs1404419433 2886 dbSNP
rs1284451372 2897 dbSNP
rs1325803573 2897 dbSNP
rs1015052373 2899 dbSNP
rs963041554 2902 dbSNP
rs973040050 2909 dbSNP
rs1473850271 2910 dbSNP
rs967013904 2912 dbSNP
rs1212558118 2917 dbSNP
rs1197980060 2919 dbSNP
rs1478076040 2919 dbSNP
rs916845728 2926 dbSNP
rs1190614021 2927 dbSNP
rs1446103087 2930 dbSNP
rs979467641 2936 dbSNP
rs982752644 2938 dbSNP
rs1321255054 2943 dbSNP
rs140025082 2948 dbSNP
rs760223179 2949 dbSNP
rs1278229337 2962 dbSNP
rs1428863215 2968 dbSNP
rs1485398354 2973 dbSNP
rs1321636627 2976 dbSNP
rs115172487 2981 dbSNP
rs1052534481 2982 dbSNP
rs1176360429 2995 dbSNP
rs1414499168 2997 dbSNP
rs1239399366 3002 dbSNP
rs1165713970 3003 dbSNP
rs1474587196 3005 dbSNP
rs1474876777 3007 dbSNP
rs893869481 3008 dbSNP
rs1190207167 3026 dbSNP
rs776396739 3032 dbSNP
rs769566588 3040 dbSNP
rs918004638 3041 dbSNP
rs578140742 3054 dbSNP
rs1313932296 3066 dbSNP
rs1280811478 3067 dbSNP
rs899828474 3070 dbSNP
rs949603622 3071 dbSNP
rs973298333 3080 dbSNP
rs145426711 3089 dbSNP
rs1373051228 3094 dbSNP
rs1381078877 3097 dbSNP
rs1336526308 3110 dbSNP
rs918859114 3124 dbSNP
rs759855927 3144 dbSNP
rs1167625245 3153 dbSNP
rs1334292444 3156 dbSNP
rs1341876416 3162 dbSNP
rs1408878286 3165 dbSNP
rs1428228608 3172 dbSNP
rs558383914 3180 dbSNP
rs1269303553 3192 dbSNP
rs1384357428 3192 dbSNP
rs1365696305 3195 dbSNP
rs1231108903 3208 dbSNP
rs1202453488 3210 dbSNP
rs931533499 3215 dbSNP
rs147728175 3219 dbSNP
rs562541013 3220 dbSNP
rs887409660 3221 dbSNP
rs1357616435 3222 dbSNP
rs560809535 3227 dbSNP
rs1314794349 3229 dbSNP
rs943030494 3235 dbSNP
rs1229259438 3253 dbSNP
rs1347108146 3255 dbSNP
rs1381904452 3259 dbSNP
rs1005081735 3264 dbSNP
rs370549807 3268 dbSNP
rs963093954 3275 dbSNP
rs142500788 3278 dbSNP
rs1445439466 3280 dbSNP
rs1422346974 3283 dbSNP
rs144946670 3284 dbSNP
rs1248993288 3291 dbSNP
rs1425347199 3298 dbSNP
rs1021175806 3301 dbSNP
rs1176579841 3304 dbSNP
rs1472898786 3308 dbSNP
rs1252595174 3309 dbSNP
rs371784290 3309 dbSNP
rs1207449806 3310 dbSNP
rs969039684 3311 dbSNP
rs1437793028 3316 dbSNP
rs1265102471 3328 dbSNP
rs753204876 3333 dbSNP
rs902433074 3335 dbSNP
rs1305365738 3366 dbSNP
rs1228296254 3369 dbSNP
rs1000752761 3375 dbSNP
rs1032255019 3379 dbSNP
rs190976650 3390 dbSNP
rs200917629 3393 dbSNP
rs1478683200 3395 dbSNP
rs1172591224 3397 dbSNP
rs959401901 3406 dbSNP
rs547630191 3409 dbSNP
rs1158163773 3410 dbSNP
rs990801434 3414 dbSNP
rs1025093306 3427 dbSNP
rs1184370286 3430 dbSNP
rs1039758937 3433 dbSNP
rs544137928 3433 dbSNP
rs971191658 3434 dbSNP
rs1191961655 3435 dbSNP
rs1489618305 3445 dbSNP
rs755222171 3449 dbSNP
rs1317223491 3453 dbSNP
rs1208568328 3461 dbSNP
rs15414 3464 dbSNP
rs1388984253 3469 dbSNP
rs1270591852 3474 dbSNP
rs1221099543 3475 dbSNP
rs1330032749 3482 dbSNP
rs557510286 3492 dbSNP
rs567465135 3493 dbSNP
rs1301062645 3496 dbSNP
rs931590470 3497 dbSNP
rs1435564924 3498 dbSNP
rs868214932 3511 dbSNP
rs1051690850 3513 dbSNP
rs890347643 3522 dbSNP
rs984370190 3523 dbSNP
rs763065604 3524 dbSNP
rs763533106 3528 dbSNP
rs1004733659 3535 dbSNP
rs943060125 3546 dbSNP
rs1259920313 3547 dbSNP
rs1188262652 3549 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 801.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714644. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agacagaaaacGAUGUGUAa 5'
                     |||||||| 
Target 5' -----------CUACACAUc 3'
 		1 - 9
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714644
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repA
Location of target site ENST00000356978.4 | 3UTR | CUACACAUCAGUUUUACAAUAUAAAUACUUGUACUACCUUAAUG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
239 hsa-miR-511-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT068303 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT072025 SCP2 sterol carrier protein 2 2 2
MIRT073626 IGF1R insulin like growth factor 1 receptor 2 2
MIRT080574 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT094167 PCGF3 polycomb group ring finger 3 2 4
MIRT096536 LIFR LIF receptor alpha 2 2
MIRT156224 SLC25A12 solute carrier family 25 member 12 2 2
MIRT177714 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT184922 ZNF268 zinc finger protein 268 2 2
MIRT185107 LYPLAL1 lysophospholipase like 1 2 2
MIRT193093 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT213346 TADA2B transcriptional adaptor 2B 2 2
MIRT225350 SDCBP syndecan binding protein 2 2
MIRT226972 AKAP2 A-kinase anchoring protein 2 2 6
MIRT226977 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 6
MIRT229844 YIPF6 Yip1 domain family member 6 2 2
MIRT230994 PRRG4 proline rich and Gla domain 4 2 2
MIRT270215 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 4
MIRT277060 NDFIP2 Nedd4 family interacting protein 2 2 4
MIRT278336 CFL2 cofilin 2 2 4
MIRT280390 CALM1 calmodulin 1 2 2
MIRT298042 BACH1 BTB domain and CNC homolog 1 2 2
MIRT302449 CLIP4 CAP-Gly domain containing linker protein family member 4 2 2
MIRT311937 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 4
MIRT329263 AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 2 2
MIRT359186 F2RL1 F2R like trypsin receptor 1 2 6
MIRT363208 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT371124 YTHDC1 YTH domain containing 1 2 2
MIRT386755 TAOK1 TAO kinase 1 2 2
MIRT395122 BAHD1 bromo adjacent homology domain containing 1 2 2
MIRT396089 MKLN1 muskelin 1 2 2
MIRT443566 EVX2 even-skipped homeobox 2 2 2
MIRT447626 CUL3 cullin 3 2 2
MIRT447680 ZNF264 zinc finger protein 264 2 2
MIRT451053 NT5C1B 5'-nucleotidase, cytosolic IB 2 2
MIRT452048 NT5C1B-RDH14 NT5C1B-RDH14 readthrough 2 2
MIRT459890 KIAA1191 KIAA1191 2 4
MIRT464483 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465264 TRIM44 tripartite motif containing 44 2 2
MIRT467570 SLITRK4 SLIT and NTRK like family member 4 2 2
MIRT467800 SLC2A14 solute carrier family 2 member 14 2 2
MIRT469543 RASAL2 RAS protein activator like 2 2 2
MIRT469931 PTPRJ protein tyrosine phosphatase, receptor type J 2 4
MIRT474056 LMNB2 lamin B2 2 2
MIRT474097 LMBR1L limb development membrane protein 1 like 2 2
MIRT475183 INSIG2 insulin induced gene 2 2 6
MIRT484264 FAM177A1 family with sequence similarity 177 member A1 2 2
MIRT487567 LOXL2 lysyl oxidase like 2 2 2
MIRT499080 CBWD1 COBW domain containing 1 2 6
MIRT499126 CBWD5 COBW domain containing 5 2 6
MIRT502093 KPNA5 karyopherin subunit alpha 5 2 8
MIRT503328 SOX5 SRY-box 5 2 6
MIRT503839 NCAM2 neural cell adhesion molecule 2 2 6
MIRT504030 CEP104 centrosomal protein 104 2 4
MIRT504314 LHFPL5 LHFPL tetraspan subfamily member 5 2 8
MIRT504525 BVES blood vessel epicardial substance 2 6
MIRT504680 CYGB cytoglobin 2 4
MIRT504815 DOCK7 dedicator of cytokinesis 7 2 4
MIRT505757 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT506151 PLEKHA3 pleckstrin homology domain containing A3 2 6
MIRT506908 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 6
MIRT508259 CD226 CD226 molecule 2 2
MIRT508307 XRCC3 X-ray repair cross complementing 3 2 4
MIRT508784 CDKL1 cyclin dependent kinase like 1 2 6
MIRT508897 C4orf29 abhydrolase domain containing 18 2 6
MIRT508967 TECRL trans-2,3-enoyl-CoA reductase like 2 4
MIRT508973 MLLT3 MLLT3, super elongation complex subunit 2 6
MIRT509149 TSC22D3 TSC22 domain family member 3 2 4
MIRT509188 TSPAN2 tetraspanin 2 2 4
MIRT509212 BRCC3 BRCA1/BRCA2-containing complex subunit 3 2 4
MIRT509214 SEC23IP SEC23 interacting protein 2 6
MIRT509237 PDE10A phosphodiesterase 10A 2 6
MIRT509248 OTX1 orthodenticle homeobox 1 2 6
MIRT509469 TRIM2 tripartite motif containing 2 2 4
MIRT509754 EFCAB11 EF-hand calcium binding domain 11 2 4
MIRT509805 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT509938 USP25 ubiquitin specific peptidase 25 2 4
MIRT509954 ITGA1 integrin subunit alpha 1 2 6
MIRT509965 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 4
MIRT509988 GTF2H1 general transcription factor IIH subunit 1 2 4
MIRT510036 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 6
MIRT510164 STARD8 StAR related lipid transfer domain containing 8 2 4
MIRT510199 CYP4F11 cytochrome P450 family 4 subfamily F member 11 2 9
MIRT510249 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 6
MIRT510502 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 2 2
MIRT510906 PURA purine rich element binding protein A 2 4
MIRT511051 NRF1 nuclear respiratory factor 1 2 4
MIRT511273 KLHL23 kelch like family member 23 2 4
MIRT511368 IL6ST interleukin 6 signal transducer 2 4
MIRT511521 HMGB2 high mobility group box 2 2 4
MIRT512004 DUSP7 dual specificity phosphatase 7 2 4
MIRT512080 CSRNP3 cysteine and serine rich nuclear protein 3 2 8
MIRT514234 EPOR erythropoietin receptor 2 4
MIRT515327 SLC35E3 solute carrier family 35 member E3 2 4
MIRT515409 WDR72 WD repeat domain 72 2 8
MIRT515973 C9orf156 tRNA methyltransferase O 2 4
MIRT516015 NLGN3 neuroligin 3 2 4
MIRT516271 DBT dihydrolipoamide branched chain transacylase E2 2 10
MIRT516495 GLRX2 glutaredoxin 2 2 4
MIRT517272 ANG angiogenin 2 4
MIRT517511 KCNK12 potassium two pore domain channel subfamily K member 12 2 4
MIRT517555 VENTX VENT homeobox 2 4
MIRT519511 RBM22 RNA binding motif protein 22 2 4
MIRT520350 UBN2 ubinuclein 2 2 2
MIRT520687 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT520960 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT521759 PPIL1 peptidylprolyl isomerase like 1 2 6
MIRT522036 PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 2 4
MIRT522127 NELL2 neural EGFL like 2 2 4
MIRT522624 MAP7D1 MAP7 domain containing 1 2 4
MIRT522761 LDLR low density lipoprotein receptor 2 6
MIRT522924 KAT6A lysine acetyltransferase 6A 2 6
MIRT523391 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 4
MIRT523851 ETV6 ETS variant 6 2 2
MIRT523890 EPHA5 EPH receptor A5 2 4
MIRT523945 E2F8 E2F transcription factor 8 2 4
MIRT524222 DCUN1D3 defective in cullin neddylation 1 domain containing 3 2 2
MIRT524410 CNTNAP5 contactin associated protein like 5 2 4
MIRT524568 CALML4 calmodulin like 4 2 4
MIRT524611 ENTHD1 ENTH domain containing 1 2 2
MIRT524907 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 2 4
MIRT525019 ABHD13 abhydrolase domain containing 13 2 6
MIRT525211 C19orf12 chromosome 19 open reading frame 12 2 2
MIRT528253 BMS1 BMS1, ribosome biogenesis factor 2 2
MIRT528294 ZNF76 zinc finger protein 76 2 2
MIRT531898 INVS inversin 2 4
MIRT535962 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT540823 SSPN sarcospan 2 4
MIRT541836 CDON cell adhesion associated, oncogene regulated 2 4
MIRT541914 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT542156 KIAA2018 upstream transcription factor family member 3 2 6
MIRT542175 SERTM1 serine rich and transmembrane domain containing 1 2 6
MIRT542217 IRS1 insulin receptor substrate 1 2 4
MIRT542225 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 6
MIRT543654 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT544097 EDA2R ectodysplasin A2 receptor 2 2
MIRT544533 SPPL3 signal peptide peptidase like 3 2 2
MIRT544954 TUB tubby bipartite transcription factor 2 4
MIRT545027 PLP1 proteolipid protein 1 2 2
MIRT546524 SERTAD3 SERTA domain containing 3 2 2
MIRT547242 OSBPL9 oxysterol binding protein like 9 2 4
MIRT548198 FNIP1 folliculin interacting protein 1 2 2
MIRT548272 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT549480 ACBD5 acyl-CoA binding domain containing 5 2 2
MIRT549498 ABI2 abl interactor 2 2 2
MIRT550325 SMAD9 SMAD family member 9 2 2
MIRT550563 CYP4V2 cytochrome P450 family 4 subfamily V member 2 2 6
MIRT550642 AR androgen receptor 2 2
MIRT550945 CTSE cathepsin E 2 4
MIRT550961 POT1 protection of telomeres 1 2 2
MIRT551178 ATP7A ATPase copper transporting alpha 2 2
MIRT551416 LRRC31 leucine rich repeat containing 31 2 2
MIRT551507 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 2 2
MIRT551517 MMADHC methylmalonic aciduria and homocystinuria, cblD type 2 2
MIRT551550 TMEM133 transmembrane protein 133 2 2
MIRT551757 TRIM42 tripartite motif containing 42 2 2
MIRT551872 TMEM47 transmembrane protein 47 2 2
MIRT551882 EPHA1 EPH receptor A1 2 2
MIRT551917 IGLON5 IgLON family member 5 2 2
MIRT552377 ZNF562 zinc finger protein 562 2 2
MIRT552543 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT553419 TRAF5 TNF receptor associated factor 5 2 2
MIRT554080 SNX4 sorting nexin 4 2 4
MIRT554588 RRAGC Ras related GTP binding C 2 2
MIRT554887 RCC2 regulator of chromosome condensation 2 2 2
MIRT555568 PLCB1 phospholipase C beta 1 2 2
MIRT555819 PCDH11Y protocadherin 11 Y-linked 2 4
MIRT555969 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT556028 MXD1 MAX dimerization protein 1 2 2
MIRT556206 MBNL2 muscleblind like splicing regulator 2 2 2
MIRT556251 MARCH3 membrane associated ring-CH-type finger 3 2 2
MIRT557265 HMGN3 high mobility group nucleosomal binding domain 3 2 2
MIRT557334 HHIP hedgehog interacting protein 2 2
MIRT557427 GXYLT2 glucoside xylosyltransferase 2 2 4
MIRT557537 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT557797 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT557805 FOXP1 forkhead box P1 2 2
MIRT558569 CRIM1 cysteine rich transmembrane BMP regulator 1 2 2
MIRT558734 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT558878 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT558933 CBX1 chromobox 1 2 2
MIRT559133 BTG3 BTG anti-proliferation factor 3 2 4
MIRT559168 BRWD3 bromodomain and WD repeat domain containing 3 2 4
MIRT559618 AMER1 APC membrane recruitment protein 1 2 2
MIRT561627 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT561971 LRRC59 leucine rich repeat containing 59 2 2
MIRT563049 ZNF138 zinc finger protein 138 2 2
MIRT563432 TRIM13 tripartite motif containing 13 2 4
MIRT563540 RBM41 RNA binding motif protein 41 2 2
MIRT564647 ZNF544 zinc finger protein 544 2 2
MIRT567674 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT567755 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT568267 BICD2 BICD cargo adaptor 2 2 2
MIRT569160 SIGMAR1 sigma non-opioid intracellular receptor 1 2 2
MIRT569179 DMD dystrophin 2 2
MIRT569427 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT569853 RGS5 regulator of G protein signaling 5 2 2
MIRT570554 PLAG1 PLAG1 zinc finger 2 2
MIRT571233 SYT9 synaptotagmin 9 2 2
MIRT572276 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT572539 ZFHX2 zinc finger homeobox 2 2 2
MIRT574271 ZNF350 zinc finger protein 350 2 2
MIRT574428 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT574671 HNRNPDL heterogeneous nuclear ribonucleoprotein D like 2 2
MIRT576699 Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 2
MIRT607889 SATB1 SATB homeobox 1 2 2
MIRT608846 FGF14 fibroblast growth factor 14 2 6
MIRT608854 SPATA6 spermatogenesis associated 6 2 2
MIRT608879 CNTF ciliary neurotrophic factor 2 6
MIRT608899 ZNF860 zinc finger protein 860 2 2
MIRT608948 C12orf60 chromosome 12 open reading frame 60 2 2
MIRT609029 CDH6 cadherin 6 2 2
MIRT609063 LPP LIM domain containing preferred translocation partner in lipoma 2 4
MIRT612277 ZNF280B zinc finger protein 280B 2 2
MIRT612520 SEPT7 septin 7 2 2
MIRT617202 GREM1 gremlin 1, DAN family BMP antagonist 2 2
MIRT618700 KIF13A kinesin family member 13A 2 2
MIRT619141 AFF2 AF4/FMR2 family member 2 2 2
MIRT621071 RAB11FIP3 RAB11 family interacting protein 3 2 6
MIRT627811 PTCHD1 patched domain containing 1 2 4
MIRT641782 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT657645 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT669313 C16orf72 chromosome 16 open reading frame 72 2 2
MIRT674602 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 2
MIRT684064 CPPED1 calcineurin like phosphoesterase domain containing 1 2 2
MIRT685149 TACR3 tachykinin receptor 3 2 2
MIRT693446 PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma 2 2
MIRT693808 WDR3 WD repeat domain 3 2 2
MIRT703845 ETV3 ETS variant 3 2 2
MIRT707100 ZNF850 zinc finger protein 850 2 2
MIRT707375 SVIP small VCP interacting protein 2 2
MIRT707467 ROCK2 Rho associated coiled-coil containing protein kinase 2 2 2
MIRT707514 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT707542 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT707560 CLVS2 clavesin 2 2 2
MIRT708113 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT708217 ADD2 adducin 2 2 2
MIRT710678 MX2 MX dynamin like GTPase 2 2 2
MIRT755898 ZFPM2-AS1 ZFPM2 antisense RNA 1 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-511-3p Doxorubicin 31703 NSC123127 approved resistant High Anaplastic Thyroid Cancer tissue
hsa-miR-511-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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