miRTarBase - #MIRT294663


—
pre-miRNA Information
pre-miRNA hsa-mir-1273h   
Genomic Coordinates chr16: 24203116 - 24203231
Description Homo sapiens miR-1273h stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-1273h-5p
Sequence 33| CUGGGAGGUCAAGGCUGCAGU |53
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1028034199 14 dbSNP
rs542383563 18 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ZNF548   
Synonyms -
Description zinc finger protein 548
Transcript NM_001172773   
Other Transcripts NM_152909   
Expression
Putative miRNA Targets on ZNF548
3'UTR of ZNF548
(miRNA target sites are highlighted)		 
>ZNF548|NM_001172773|3'UTR
   1 CTATTGTAATTGGGTAGTAATGTTATATAAATTCCACATTTTTATGCAACTAATCTCCAGAACATTTTTCCTCTTACCAA
  81 GAAGTAAAATGCTGTACCCATTAACAACAACTCATTCCCCTTCCCTACTTCCCCAGAAATGTCTCAACTATATTTCTATA
 161 CTCTATGGTACTTATATGAGGTACCAATAGATATCTATGAATTTGATATATATTTGTACCTCATATAAGTGGATTCTACA
 241 GTATTTATCTTTTGAGACTGGCTTATTTCACTTAGGATAAGGTCTTCACGGTTCACCCATGTTGTATAATGTGTCAGAAT
 321 ATCCTTCCTTTTTAGGTGAAATAATATTCTATGGTATTTATATACCACATTTATTTATCCATTCATCTGTTAGTGGATAC
 401 TTGGGCTACTTCCACCTTTTGCCTATTGAAATAATGCTGCTATGAAGATGAGTGTACAAGTGTCTATTCAAGATTCTACT
 481 TTCAATTCTTATAGGGTATATACTCAGAAATGGTGGTGCTGGATCATATAGGATTTCTATTTTTTTTTTTTGTTTGTTTT
 561 TGAGACAGAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGCTGTGATCTTGGCTCACTGCAAGCTCCGCCTCCCAGGT
 641 TCATGCCATTCTCCTGCCTCACCCTCCCGAGTAGCTGGGACTACAGGTGCCTGCCACCACGCCTGGCTAATTTTTTTGTA
 721 TTTTTAGTAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCCTGATCTCCTGACCTTGTGATCTGCCTGCCTTGGCCT
 801 CTCAAAGTGCTGGGATTACGGGCGTGAGCCACCGCGCCTGGCCAGGATTTCTATTTTTAATATTTTTGGGAAAATTTTTC
 881 CATAGTACCTGTGCCATTTTACATTCCCACCAGCAGTGCACAAGGATTGCAATCTATATACATCCTCACCAACATTGTTC
 961 ATTTTCTATTTCTGTTTTTGGGGTTTTTTGTAGTGCCTTTTGTTTTGGATAGCAGCTATCTTGTTGGATGTGAGGTGGAA
1041 TCTATAGTGTCTTTCATTTTTATTTTGTGAATGATTGATGATGTTGAGGATCTTTTCATGTGCTTGTTAGGCATTTGTGT
1121 ATCTGGAAAAATATTCAAGTCTTTTTTTTCCATTTTTAATGGGACTATTTGCTTTTTGTTGTTGAGTTGTAGTTCTTTAT
1201 ACATTCTGGATATTAACTCCTTACCAAATATATGCTTTTTACATATTACCTCCCAGTCCATAGGTTGCTTTTTCGCTCTG
1281 TTGATTGTGTCCTTTGATGAAATTTTAAGTTTTGATGTACTGTTGACTCTTTCTGTCTGTGGGTTCTGTATTCATGGATC
1361 GAAGCAACCATGGATCAAAAGTATTTGGAGCATCCATGGATTGCAGTGATCATTAATCAAAAATATTTGGAAAACAAAAA
1441 GGGTAGTTGCATCTGTACTAAACATGAACAGACATTTTTTCTTGTCATTATTCCCTAAACTATATAGTATAATAAATATT
1521 TACATAGCATTTACATTGTATTAGAAGTTATAAATAACCTAATGATAATCTATATAGGAAGATGTGTGTAGGTTATATTC
1601 AAACACTATGCCTTTTTATGTGAGGGACCTCTTGAGCATCAGATGATTTTGGTATCCACAAGGGGTCCTGGAATCAGTCC
1681 CCCACAGACACCAAGGGATGACTGTAGTGCATTTTATCTATTTTTACTTCTGTTACCTGGGCTTTTGATGTTATATATTA
1761 AAAAAAATTAGTATCAAATCCAATGCCAAGCATTTTCCCTATGCTTTATTCTAAGAATTTTATATTTGAAGGTCTTACAT
1841 TTAGGTCTTTTTTTTTTTTTTCTTTTGGAGGCAGAGTCTTGCTCTGTCACCCAGCCTGGAGTGCAGTAGTGGAATCTCAG
1921 CTCACTACAACCTCCGCCTCCTGGGTTCGAGCCATCACCCCACCTCAGCCTCCCAAGTAGCTTGGATTACAAGTGTACAC
2001 CACCACACCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTTAAACTTCTGGC
2081 CTTAAGTGATCCCCCTGCCTCGGCCTCCCAAATTGCTGAGATTACAGGCAGGAGTTGTAATGCACTGTGCCTGGCTACAT
2161 TTAGATCTTTAATCTACTTGGGGTTCATTTTTGCATATGGTTTAAGGCAAAAGTCCACTTTATGTGGCTATCCAGTTTTC
2241 CAAGCACCATTTTTTGAAAAGAGCATCTTTCCTCTGTTGAGTAGTCTTGGCACACTTGTCAAAATCATTTGTCCATATAT
2321 GCCATGGTTTATATGTGGATTCTCTATTTTATTGGTCATATGTCTGTCTTTATGTCAGTACCACACATTTTAGGTGTGTG
2401 TGTGTGAGACTCAGTGTTGAGGACAAGGCTAGTGGGCTTTCACACTCCAGACTGCTGTATTCCAGCCCAAATTACTCAAA
2481 TTAGCCAATCCATGGGGAACATGGAAAACGTAGCTAATGCAATCCGCTTGCCTTACCTAAGTTGTCCCCTGCAGCCTCAG
2561 GTTGCTGTTACTGTGTTTCAGATGCAACCCTCTGTGGGACCCTACCCAAGTTCTCTCATTCTTAGCTATAGGTAATAAAT
2641 TGTTCTGATTTTGTGTATCCAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugacGUCGGAACUGGAGGGUc 5'
              | |||| |:||||||| 
Target 5' ccccCTGCCTCGGCCTCCCAa 3'
 2091 - 2111 165.00 -22.70
2 
miRNA  3' ugACGUCGGAACUGGAGGGUc 5'
            ||||  ||  :||||||| 
Target 5' acTGCAAGCTCCGCCTCCCAg 3'
 618 - 638 159.00 -25.80
3 
miRNA  3' ugAC-GUCGGAACUGGAGGGUc 5'
            || | ||||||:||||:|| 
Target 5' tcTGCCTGCCTTGGCCTCTCAa 3'
 784 - 805 159.00 -28.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN28560917 45 COSMIC
COSN6148068 143 COSMIC
COSN7450971 272 COSMIC
COSN17835196 549 COSMIC
COSN30013687 814 COSMIC
COSN6553056 1084 COSMIC
COSN26308166 1233 COSMIC
COSN23758824 1277 COSMIC
COSN24988221 1789 COSMIC
COSN1219348 1863 COSMIC
COSN19406096 2275 COSMIC
COSN22417980 2301 COSMIC
COSN27990251 2333 COSMIC
COSN29986703 2367 COSMIC
COSN21763100 2407 COSMIC
COSN27530096 2433 COSMIC
COSN24937334 2525 COSMIC
COSN8976999 2582 COSMIC
COSN9852824 2607 COSMIC
COSN22286919 2676 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs372739751 4 dbSNP
rs1168941360 5 dbSNP
rs1412587513 7 dbSNP
rs769086629 11 dbSNP
rs778051725 15 dbSNP
rs1427671729 18 dbSNP
rs1297165831 25 dbSNP
rs774921626 26 dbSNP
rs1397464968 27 dbSNP
rs1026186485 31 dbSNP
rs766127227 32 dbSNP
rs748300181 35 dbSNP
rs1020554481 40 dbSNP
rs1300200951 45 dbSNP
rs950716117 50 dbSNP
rs1185828752 53 dbSNP
rs1158943986 63 dbSNP
rs1374445876 72 dbSNP
rs984737813 85 dbSNP
rs1442273203 92 dbSNP
rs1445238804 97 dbSNP
rs1202710737 103 dbSNP
rs1349369606 106 dbSNP
rs754363677 108 dbSNP
rs183935665 109 dbSNP
rs1379213530 110 dbSNP
rs904755085 117 dbSNP
rs538498511 118 dbSNP
rs1016487576 132 dbSNP
rs1445530992 135 dbSNP
rs1339666204 139 dbSNP
rs1029160461 147 dbSNP
rs953483491 149 dbSNP
rs964577754 154 dbSNP
rs1358645523 159 dbSNP
rs1158101044 161 dbSNP
rs1420426588 166 dbSNP
rs1240600397 167 dbSNP
rs1180397044 185 dbSNP
rs1472636469 190 dbSNP
rs974789330 192 dbSNP
rs923382832 193 dbSNP
rs554292063 195 dbSNP
rs1238445203 196 dbSNP
rs757720828 198 dbSNP
rs574405270 210 dbSNP
rs1287066122 215 dbSNP
rs1019414595 226 dbSNP
rs1263157456 227 dbSNP
rs913473778 228 dbSNP
rs1353875268 232 dbSNP
rs1347454441 239 dbSNP
rs1208227379 240 dbSNP
rs1355325300 241 dbSNP
rs1284585923 250 dbSNP
rs1450012739 254 dbSNP
rs947599240 255 dbSNP
rs1338293060 259 dbSNP
rs1297575507 262 dbSNP
rs1400675745 263 dbSNP
rs779004132 265 dbSNP
rs972448860 278 dbSNP
rs144568299 282 dbSNP
rs937519969 288 dbSNP
rs553950533 290 dbSNP
rs558251664 291 dbSNP
rs927126341 296 dbSNP
rs937135572 299 dbSNP
rs1243372977 304 dbSNP
rs1218859629 306 dbSNP
rs1441971618 317 dbSNP
rs1159607685 323 dbSNP
rs1290195204 330 dbSNP
rs1234898581 332 dbSNP
rs868351003 339 dbSNP
rs577011251 352 dbSNP
rs1277420228 355 dbSNP
rs374542705 357 dbSNP
rs945755410 361 dbSNP
rs1177704289 363 dbSNP
rs188771346 365 dbSNP
rs886123588 367 dbSNP
rs1006511279 368 dbSNP
rs1016189463 372 dbSNP
rs1464343425 376 dbSNP
rs192947303 378 dbSNP
rs1171953959 381 dbSNP
rs1447359114 405 dbSNP
rs1479099466 415 dbSNP
rs964892414 422 dbSNP
rs1302446221 426 dbSNP
rs1188915625 431 dbSNP
rs974611242 448 dbSNP
rs1030400035 460 dbSNP
rs111816780 467 dbSNP
rs1456248170 468 dbSNP
rs988909888 472 dbSNP
rs561819719 473 dbSNP
rs1199093369 482 dbSNP
rs947414136 485 dbSNP
rs1312915527 488 dbSNP
rs545762109 490 dbSNP
rs1256770320 492 dbSNP
rs185154702 493 dbSNP
rs1368418904 494 dbSNP
rs777816323 511 dbSNP
rs927603222 523 dbSNP
rs937508753 529 dbSNP
rs1252770690 530 dbSNP
rs1477213307 538 dbSNP
rs1195059431 540 dbSNP
rs1463885971 540 dbSNP
rs369275987 540 dbSNP
rs574266164 540 dbSNP
rs1437412207 544 dbSNP
rs1481527924 549 dbSNP
rs8100473 549 dbSNP
rs952669520 549 dbSNP
rs552371858 550 dbSNP
rs1209345619 552 dbSNP
rs1425429222 553 dbSNP
rs569858120 555 dbSNP
rs1282585417 556 dbSNP
rs1427452483 557 dbSNP
rs1167940951 563 dbSNP
rs1401789040 565 dbSNP
rs1377449770 567 dbSNP
rs1466077246 584 dbSNP
rs190436067 592 dbSNP
rs1347961841 611 dbSNP
rs958551497 613 dbSNP
rs993053548 614 dbSNP
rs1379293405 616 dbSNP
rs1158891434 622 dbSNP
rs538036353 626 dbSNP
rs1005917288 627 dbSNP
rs1276870710 628 dbSNP
rs1368544007 629 dbSNP
rs1038017671 630 dbSNP
rs1276423399 631 dbSNP
rs900442021 632 dbSNP
rs995995119 637 dbSNP
rs1041425159 638 dbSNP
rs1030143164 641 dbSNP
rs1320249467 644 dbSNP
rs925613667 645 dbSNP
rs1397017855 651 dbSNP
rs1357914995 654 dbSNP
rs1296953460 659 dbSNP
rs548901729 661 dbSNP
rs568650167 663 dbSNP
rs1020377591 664 dbSNP
rs969116859 665 dbSNP
rs533818322 669 dbSNP
rs927518771 670 dbSNP
rs958976349 679 dbSNP
rs1009088798 683 dbSNP
rs889345711 683 dbSNP
rs553756552 684 dbSNP
rs1407481682 696 dbSNP
rs1191434314 699 dbSNP
rs192366408 701 dbSNP
rs1190964992 702 dbSNP
rs1487610702 704 dbSNP
rs1425160033 707 dbSNP
rs1245973229 711 dbSNP
rs1337424968 711 dbSNP
rs1276787339 713 dbSNP
rs1218601522 717 dbSNP
rs1339221475 722 dbSNP
rs930152226 727 dbSNP
rs868275013 735 dbSNP
rs1477853783 736 dbSNP
rs1047927448 743 dbSNP
rs907654793 746 dbSNP
rs1406924554 747 dbSNP
rs952055334 757 dbSNP
rs941671927 760 dbSNP
rs1396415522 761 dbSNP
rs1344347734 762 dbSNP
rs1399634713 766 dbSNP
rs547033017 777 dbSNP
rs539510851 778 dbSNP
rs1195412254 782 dbSNP
rs1002131656 788 dbSNP
rs1266873976 795 dbSNP
rs1034253807 799 dbSNP
rs958602035 810 dbSNP
rs1256579952 811 dbSNP
rs1198464486 818 dbSNP
rs1037398290 819 dbSNP
rs367809063 820 dbSNP
rs867145769 821 dbSNP
rs1284170151 825 dbSNP
rs1051687002 829 dbSNP
rs139195172 831 dbSNP
rs1010106163 832 dbSNP
rs111706483 834 dbSNP
rs1397108706 835 dbSNP
rs751235039 836 dbSNP
rs771423267 837 dbSNP
rs1000591951 838 dbSNP
rs1455725053 840 dbSNP
rs1236628383 842 dbSNP
rs562058757 848 dbSNP
rs1438817173 864 dbSNP
rs1050068495 868 dbSNP
rs1199252092 875 dbSNP
rs910834082 875 dbSNP
rs549844547 883 dbSNP
rs1254925371 888 dbSNP
rs958701302 890 dbSNP
rs944944133 892 dbSNP
rs1349593237 904 dbSNP
rs1264874753 911 dbSNP
rs1488355005 916 dbSNP
rs371373415 922 dbSNP
rs1186575045 928 dbSNP
rs183968134 935 dbSNP
rs572197466 936 dbSNP
rs1235190248 942 dbSNP
rs540240674 951 dbSNP
rs1473755760 952 dbSNP
rs1330761092 954 dbSNP
rs1401464612 958 dbSNP
rs759058575 961 dbSNP
rs1163703391 969 dbSNP
rs1174302577 971 dbSNP
rs993006532 974 dbSNP
rs548457375 975 dbSNP
rs1378687668 983 dbSNP
rs1470680194 984 dbSNP
rs993646392 984 dbSNP
rs1157157291 986 dbSNP
rs1362659612 991 dbSNP
rs917531929 1001 dbSNP
rs1258911973 1003 dbSNP
rs1400747662 1015 dbSNP
rs951545832 1016 dbSNP
rs1210963206 1019 dbSNP
rs1333622510 1024 dbSNP
rs1377065976 1026 dbSNP
rs1283354141 1029 dbSNP
rs1049147653 1043 dbSNP
rs1351063555 1052 dbSNP
rs1244758250 1055 dbSNP
rs78270432 1056 dbSNP
rs1450830132 1060 dbSNP
rs1313473519 1071 dbSNP
rs535253130 1076 dbSNP
rs12978811 1078 dbSNP
rs1297780414 1087 dbSNP
rs1037876799 1090 dbSNP
rs894432050 1092 dbSNP
rs1014591565 1093 dbSNP
rs921562067 1095 dbSNP
rs771338349 1098 dbSNP
rs931645501 1101 dbSNP
rs1419138211 1103 dbSNP
rs1190700864 1109 dbSNP
rs1024193212 1118 dbSNP
rs376017739 1120 dbSNP
rs1486343532 1121 dbSNP
rs1260436291 1133 dbSNP
rs1214512310 1139 dbSNP
rs1285988372 1142 dbSNP
rs1447181272 1142 dbSNP
rs1051676127 1146 dbSNP
rs757809165 1150 dbSNP
rs1287778758 1151 dbSNP
rs1353999975 1152 dbSNP
rs1199487842 1153 dbSNP
rs565608885 1168 dbSNP
rs1032783201 1179 dbSNP
rs945853402 1189 dbSNP
rs1041580413 1190 dbSNP
rs535018619 1193 dbSNP
rs1431628199 1195 dbSNP
rs1347169361 1196 dbSNP
rs1321843479 1199 dbSNP
rs1405067453 1204 dbSNP
rs910215194 1206 dbSNP
rs1167667384 1210 dbSNP
rs944347611 1211 dbSNP
rs1477113737 1223 dbSNP
rs976748289 1233 dbSNP
rs904368950 1244 dbSNP
rs1185421925 1246 dbSNP
rs1475491642 1249 dbSNP
rs1232233286 1250 dbSNP
rs1437640894 1259 dbSNP
rs188243745 1261 dbSNP
rs1000246240 1267 dbSNP
rs181378338 1275 dbSNP
rs76792679 1276 dbSNP
rs1272286763 1279 dbSNP
rs1315953762 1279 dbSNP
rs1420540734 1280 dbSNP
rs1215179244 1282 dbSNP
rs750830033 1283 dbSNP
rs887896621 1292 dbSNP
rs1440471769 1309 dbSNP
rs548494692 1314 dbSNP
rs1400229205 1322 dbSNP
rs1372061054 1328 dbSNP
rs1328304159 1329 dbSNP
rs1014248071 1332 dbSNP
rs1055095724 1332 dbSNP
rs896487677 1336 dbSNP
rs1013561131 1338 dbSNP
rs1024663156 1343 dbSNP
rs903080151 1349 dbSNP
rs1024491942 1351 dbSNP
rs951690080 1354 dbSNP
rs983448873 1355 dbSNP
rs1032835673 1357 dbSNP
rs1335494104 1362 dbSNP
rs1231315897 1366 dbSNP
rs957146226 1368 dbSNP
rs1309280807 1370 dbSNP
rs1376777414 1371 dbSNP
rs879923757 1375 dbSNP
rs1348859485 1382 dbSNP
rs1305968257 1383 dbSNP
rs568740353 1386 dbSNP
rs1373066481 1397 dbSNP
rs758520094 1403 dbSNP
rs966114287 1417 dbSNP
rs1357979584 1419 dbSNP
rs1311958492 1426 dbSNP
rs1378025828 1431 dbSNP
rs963209184 1435 dbSNP
rs1253872318 1436 dbSNP
rs973145137 1443 dbSNP
rs1433633859 1444 dbSNP
rs779950513 1455 dbSNP
rs1346594374 1459 dbSNP
rs1175131768 1462 dbSNP
rs921714659 1463 dbSNP
rs1437546589 1468 dbSNP
rs931635672 1473 dbSNP
rs1177618041 1475 dbSNP
rs987159216 1475 dbSNP
rs1257401186 1495 dbSNP
rs1456407149 1503 dbSNP
rs1235728371 1513 dbSNP
rs911799829 1517 dbSNP
rs1486045514 1519 dbSNP
rs1200417024 1521 dbSNP
rs577969236 1525 dbSNP
rs1432370218 1526 dbSNP
rs945956271 1527 dbSNP
rs1042044659 1528 dbSNP
rs984964440 1529 dbSNP
rs1376099690 1534 dbSNP
rs1377619909 1542 dbSNP
rs746276510 1543 dbSNP
rs938149837 1544 dbSNP
rs904320859 1545 dbSNP
rs1055151006 1555 dbSNP
rs1375554304 1555 dbSNP
rs1451145861 1563 dbSNP
rs145053904 1567 dbSNP
rs935866267 1585 dbSNP
rs903129900 1588 dbSNP
rs1333886443 1594 dbSNP
rs1187147005 1606 dbSNP
rs1475555818 1609 dbSNP
rs998767565 1612 dbSNP
rs1386560491 1621 dbSNP
rs1055801830 1622 dbSNP
rs1214610289 1639 dbSNP
rs1298794906 1646 dbSNP
rs1485648394 1649 dbSNP
rs894586906 1655 dbSNP
rs1218370206 1662 dbSNP
rs1014194167 1663 dbSNP
rs1293170341 1664 dbSNP
rs1054332672 1665 dbSNP
rs1357967639 1672 dbSNP
rs1233463994 1674 dbSNP
rs762332694 1684 dbSNP
rs1380091416 1693 dbSNP
rs892981338 1698 dbSNP
rs1289095876 1705 dbSNP
rs1455088290 1706 dbSNP
rs1277058234 1714 dbSNP
rs1007369961 1720 dbSNP
rs1220453095 1721 dbSNP
rs747289363 1730 dbSNP
rs768970934 1731 dbSNP
rs1461876269 1734 dbSNP
rs887124272 1736 dbSNP
rs1191111871 1738 dbSNP
rs1017790033 1741 dbSNP
rs1262623733 1743 dbSNP
rs1188512079 1746 dbSNP
rs1004431320 1755 dbSNP
rs79699379 1759 dbSNP
rs965805220 1760 dbSNP
rs76636277 1761 dbSNP
rs1017614888 1766 dbSNP
rs962903506 1769 dbSNP
rs1256774915 1773 dbSNP
rs975619301 1774 dbSNP
rs781185171 1778 dbSNP
rs1028728869 1784 dbSNP
rs1200323115 1787 dbSNP
rs953137472 1792 dbSNP
rs747946813 1793 dbSNP
rs1025977480 1796 dbSNP
rs911538709 1796 dbSNP
rs186255511 1799 dbSNP
rs1476875103 1809 dbSNP
rs1166100148 1810 dbSNP
rs534453548 1820 dbSNP
rs977358170 1823 dbSNP
rs570487687 1829 dbSNP
rs557477613 1832 dbSNP
rs1424929458 1833 dbSNP
rs1457764645 1834 dbSNP
rs1195761494 1848 dbSNP
rs1470113888 1848 dbSNP
rs200712911 1848 dbSNP
rs1338124753 1853 dbSNP
rs1251363246 1860 dbSNP
rs1229031799 1861 dbSNP
rs1302309645 1862 dbSNP
rs935830372 1862 dbSNP
rs377146686 1863 dbSNP
rs1393281471 1866 dbSNP
rs1387000573 1868 dbSNP
rs1297182790 1869 dbSNP
rs1337856395 1870 dbSNP
rs556261756 1873 dbSNP
rs1219897544 1882 dbSNP
rs1390726630 1885 dbSNP
rs1278818673 1887 dbSNP
rs1055580343 1892 dbSNP
rs574300919 1900 dbSNP
rs1266996274 1901 dbSNP
rs749118556 1905 dbSNP
rs1042820410 1910 dbSNP
rs1362449138 1928 dbSNP
rs1181605962 1930 dbSNP
rs770493727 1936 dbSNP
rs1045792712 1937 dbSNP
rs887083833 1944 dbSNP
rs1206665817 1946 dbSNP
rs1484412446 1950 dbSNP
rs1004658512 1960 dbSNP
rs923965852 1962 dbSNP
rs936621523 1964 dbSNP
rs1349660334 1967 dbSNP
rs1054386026 1971 dbSNP
rs1238146756 1973 dbSNP
rs543216415 1977 dbSNP
rs1330823045 1982 dbSNP
rs1262461857 1987 dbSNP
rs1374957230 1988 dbSNP
rs1313658858 1994 dbSNP
rs796340591 1997 dbSNP
rs1436795775 2000 dbSNP
rs1383128829 2004 dbSNP
rs369308955 2007 dbSNP
rs898768159 2009 dbSNP
rs997004815 2013 dbSNP
rs1470752261 2014 dbSNP
rs1028467142 2032 dbSNP
rs1007422259 2034 dbSNP
rs1366000506 2036 dbSNP
rs1186430066 2037 dbSNP
rs1038859197 2039 dbSNP
rs535641300 2048 dbSNP
rs1211029551 2051 dbSNP
rs1443780807 2068 dbSNP
rs146418219 2078 dbSNP
rs1423781942 2081 dbSNP
rs1008612903 2082 dbSNP
rs773692789 2092 dbSNP
rs759271147 2094 dbSNP
rs1019144052 2102 dbSNP
rs967068080 2103 dbSNP
rs977513497 2105 dbSNP
rs572318614 2124 dbSNP
rs1425678328 2136 dbSNP
rs1157717274 2139 dbSNP
rs1416777115 2145 dbSNP
rs1324899239 2150 dbSNP
rs1358205777 2154 dbSNP
rs1401407975 2158 dbSNP
rs1387638319 2160 dbSNP
rs1298312170 2164 dbSNP
rs1163345548 2168 dbSNP
rs1461349657 2173 dbSNP
rs925879071 2176 dbSNP
rs1188029657 2192 dbSNP
rs1473500803 2198 dbSNP
rs1005821274 2209 dbSNP
rs1192057911 2221 dbSNP
rs1016496962 2223 dbSNP
rs1394232099 2229 dbSNP
rs1314755356 2230 dbSNP
rs959604226 2232 dbSNP
rs1211634333 2248 dbSNP
rs991428111 2250 dbSNP
rs1273802913 2257 dbSNP
rs1230047404 2262 dbSNP
rs1269786419 2268 dbSNP
rs540899751 2268 dbSNP
rs564018686 2274 dbSNP
rs765148764 2292 dbSNP
rs1431781440 2302 dbSNP
rs991382850 2314 dbSNP
rs915703307 2318 dbSNP
rs978207470 2321 dbSNP
rs767134458 2323 dbSNP
rs1395782440 2325 dbSNP
rs1351814201 2327 dbSNP
rs115241752 2328 dbSNP
rs908660726 2340 dbSNP
rs545782898 2345 dbSNP
rs1416796692 2352 dbSNP
rs1038806771 2359 dbSNP
rs574132747 2362 dbSNP
rs1475521311 2366 dbSNP
rs1482936495 2369 dbSNP
rs1249585506 2375 dbSNP
rs1191506488 2382 dbSNP
rs1180689645 2393 dbSNP
rs1467882265 2394 dbSNP
rs914521217 2403 dbSNP
rs563048026 2406 dbSNP
rs997078094 2407 dbSNP
rs1272351656 2409 dbSNP
rs1215307453 2431 dbSNP
rs1050008027 2437 dbSNP
rs891291231 2445 dbSNP
rs1008439266 2448 dbSNP
rs1378810348 2449 dbSNP
rs777037524 2457 dbSNP
rs1295748936 2470 dbSNP
rs1047493322 2471 dbSNP
rs1354507925 2477 dbSNP
rs1327600529 2478 dbSNP
rs1410102731 2480 dbSNP
rs967561347 2487 dbSNP
rs998626330 2489 dbSNP
rs1395483616 2494 dbSNP
rs1453531883 2494 dbSNP
rs1192756267 2499 dbSNP
rs1033064611 2502 dbSNP
rs1479601177 2510 dbSNP
rs139794778 2511 dbSNP
rs895439050 2514 dbSNP
rs548775191 2526 dbSNP
rs1358130560 2527 dbSNP
rs1233867785 2540 dbSNP
rs1348927177 2546 dbSNP
rs1464102532 2548 dbSNP
rs1222492540 2551 dbSNP
rs915865099 2556 dbSNP
rs553707252 2560 dbSNP
rs981707741 2563 dbSNP
rs562109945 2566 dbSNP
rs142073368 2567 dbSNP
rs1371903233 2572 dbSNP
rs4801479 2574 dbSNP
rs1031115581 2576 dbSNP
rs1177949500 2578 dbSNP
rs766306981 2581 dbSNP
rs919887275 2583 dbSNP
rs1473583619 2588 dbSNP
rs932647038 2590 dbSNP
rs377079318 2599 dbSNP
rs1486117387 2602 dbSNP
rs1258049026 2607 dbSNP
rs1214023188 2611 dbSNP
rs1307967297 2614 dbSNP
rs10407882 2616 dbSNP
rs944174180 2617 dbSNP
rs1257783623 2619 dbSNP
rs1413708499 2627 dbSNP
rs1462177871 2628 dbSNP
rs1198494684 2631 dbSNP
rs974702179 2637 dbSNP
rs151314073 2656 dbSNP
rs373534114 2658 dbSNP
rs1451307280 2667 dbSNP
rs1344411354 2668 dbSNP
rs1159689231 2669 dbSNP
rs923158612 2669 dbSNP
rs1415667253 2674 dbSNP
rs374379021 2680 dbSNP
rs1475586254 2684 dbSNP
rs1258453664 2685 dbSNP
rs1185035577 2686 dbSNP
rs569741041 2692 dbSNP
rs1032768180 2694 dbSNP
rs1211017217 2695 dbSNP
rs766522678 2709 dbSNP
rs751573009 2710 dbSNP
rs1431001888 2717 dbSNP
rs1232079930 2721 dbSNP
rs886226002 2722 dbSNP
rs1314371039 2729 dbSNP
rs1177635106 2731 dbSNP
rs941779106 2742 dbSNP
rs1360882707 2745 dbSNP
rs1037372336 2750 dbSNP
rs894820729 2754 dbSNP
rs35974612 2756 dbSNP
rs1406128379 2758 dbSNP
rs1012296145 2762 dbSNP
rs755312776 2763 dbSNP
rs1458441831 2771 dbSNP
rs781564783 2773 dbSNP
rs1168486400 2777 dbSNP
rs57869182 2780 dbSNP
rs1442618294 2783 dbSNP
rs535165826 2791 dbSNP
rs1248954483 2809 dbSNP
rs1025242694 2810 dbSNP
rs1467419591 2812 dbSNP
rs1252874255 2815 dbSNP
rs1299006080 2825 dbSNP
rs1367193761 2826 dbSNP
rs1489782707 2828 dbSNP
rs1266660970 2833 dbSNP
rs906759800 2835 dbSNP
rs1217646766 2842 dbSNP
rs1297893193 2845 dbSNP
rs1303502666 2856 dbSNP
rs77166279 2861 dbSNP
rs1464506252 2863 dbSNP
rs1387257333 2870 dbSNP
rs1012577678 2874 dbSNP
rs748310338 2877 dbSNP
rs1390946684 2888 dbSNP
rs1170747657 2891 dbSNP
rs1452905518 2892 dbSNP
rs1256712111 2893 dbSNP
rs755155146 2894 dbSNP
rs1200072303 2895 dbSNP
rs1435421147 2896 dbSNP
rs1249106056 2918 dbSNP
rs1459402303 2920 dbSNP
rs1022820869 2924 dbSNP
rs1480029525 2939 dbSNP
rs971318315 2959 dbSNP
rs981396185 2976 dbSNP
rs565568111 2978 dbSNP
rs1233793715 2984 dbSNP
rs1332749640 3002 dbSNP
rs1304805888 3003 dbSNP
rs961239980 3007 dbSNP
rs1487320549 3018 dbSNP
rs1192504545 3024 dbSNP
rs974531103 3033 dbSNP
rs534494416 3034 dbSNP
rs73063289 3045 dbSNP
rs11670908 3052 dbSNP
rs977140492 3059 dbSNP
rs749276434 3065 dbSNP
rs756418863 3067 dbSNP
rs140612220 3071 dbSNP
rs1410411916 3084 dbSNP
rs1163844503 3100 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' ugACGUCGGAACUGGAGGguc 5'
            ||||  ||  :|||||   
Target 5' acUGCAAGCUCCGCCUCC--- 3'
 		15 - 32
2 
miRNA  3' ugacgucggaACUGGAGgguc 5'
                    |||:||:    
Target 5' --------ugUGAUCUUggcu 3'
 		1 - 13
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000366197.5 | 3UTR | UGUGAUCUUGGCUCACUGCAAGCUCCGCCUCC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
494 hsa-miR-1273h-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT074355 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT100721 TJAP1 tight junction associated protein 1 2 2
MIRT115545 MAZ MYC associated zinc finger protein 2 2
MIRT124982 XIAP X-linked inhibitor of apoptosis 2 4
MIRT139911 BTF3L4 basic transcription factor 3 like 4 2 6
MIRT177183 ARL5B ADP ribosylation factor like GTPase 5B 2 4
MIRT187994 MBD6 methyl-CpG binding domain protein 6 2 2
MIRT207410 MAT2A methionine adenosyltransferase 2A 2 6
MIRT241928 DYRK2 dual specificity tyrosine phosphorylation regulated kinase 2 2 2
MIRT260110 KLHL21 kelch like family member 21 2 2
MIRT260358 XRCC6 X-ray repair cross complementing 6 2 6
MIRT266428 RPRD2 regulation of nuclear pre-mRNA domain containing 2 2 2
MIRT294663 ZNF548 zinc finger protein 548 2 2
MIRT351039 PLEKHB2 pleckstrin homology domain containing B2 2 2
MIRT379943 PRRG4 proline rich and Gla domain 4 2 2
MIRT398983 KAT7 lysine acetyltransferase 7 2 2
MIRT441465 BEST3 bestrophin 3 2 2
MIRT446750 ZNF491 zinc finger protein 491 2 2
MIRT449224 RAD51B RAD51 paralog B 2 2
MIRT450623 AQR aquarius intron-binding spliceosomal factor 2 2
MIRT451090 ZNF584 zinc finger protein 584 2 2
MIRT451558 CIAPIN1 cytokine induced apoptosis inhibitor 1 2 2
MIRT451736 CES3 carboxylesterase 3 2 2
MIRT452411 QDPR quinoid dihydropteridine reductase 2 2
MIRT452559 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452851 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452922 DISC1 disrupted in schizophrenia 1 2 2
MIRT453043 TANGO2 transport and golgi organization 2 homolog 2 4
MIRT453097 HOXC4 homeobox C4 2 2
MIRT453297 ZNF394 zinc finger protein 394 2 2
MIRT453593 ZNF557 zinc finger protein 557 2 2
MIRT453787 KBTBD12 kelch repeat and BTB domain containing 12 2 2
MIRT453987 CECR1 adenosine deaminase 2 2 2
MIRT454083 TMEM209 transmembrane protein 209 2 2
MIRT454652 FBXL18 F-box and leucine rich repeat protein 18 2 2
MIRT454753 PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 2 2
MIRT455311 TTLL9 tubulin tyrosine ligase like 9 2 2
MIRT456468 SERAC1 serine active site containing 1 2 2
MIRT456554 TOMM20 translocase of outer mitochondrial membrane 20 2 2
MIRT456716 TMEM239 transmembrane protein 239 2 4
MIRT456796 SIGLEC14 sialic acid binding Ig like lectin 14 2 2
MIRT457487 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457999 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT458130 TLCD2 TLC domain containing 2 2 2
MIRT459027 ZNF490 zinc finger protein 490 2 4
MIRT459119 FADS6 fatty acid desaturase 6 2 2
MIRT459315 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459385 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459412 FAM83B family with sequence similarity 83 member B 2 2
MIRT459974 RFT1 RFT1 homolog 2 2
MIRT460480 FAM105A family with sequence similarity 105 member A 2 6
MIRT460586 FEM1A fem-1 homolog A 2 2
MIRT460920 NOA1 nitric oxide associated 1 2 4
MIRT461072 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT461590 DPH2 DPH2 homolog 2 2
MIRT461854 ZNF317 zinc finger protein 317 2 2
MIRT462176 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT462446 GCDH glutaryl-CoA dehydrogenase 2 2
MIRT463854 WNT7B Wnt family member 7B 2 2
MIRT464310 UST uronyl 2-sulfotransferase 2 2
MIRT464815 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465453 TOR2A torsin family 2 member A 2 2
MIRT466073 TMEM184C transmembrane protein 184C 2 2
MIRT466514 TBXA2R thromboxane A2 receptor 2 2
MIRT467072 SRRD SRR1 domain containing 2 2
MIRT469551 RARA retinoic acid receptor alpha 2 2
MIRT469741 RAB2B RAB2B, member RAS oncogene family 2 2
MIRT470759 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT470875 PLXND1 plexin D1 2 2
MIRT470976 PITPNA phosphatidylinositol transfer protein alpha 2 2
MIRT471048 PIM3 Pim-3 proto-oncogene, serine/threonine kinase 2 2
MIRT471215 PHAX phosphorylated adaptor for RNA export 2 2
MIRT471246 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT471286 PGAM4 phosphoglycerate mutase family member 4 2 2
MIRT471467 PDE7B phosphodiesterase 7B 2 2
MIRT473069 MORN4 MORN repeat containing 4 2 4
MIRT473989 LRRC20 leucine rich repeat containing 20 2 2
MIRT474518 KLHDC8A kelch domain containing 8A 2 2
MIRT474990 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT475547 HNRNPUL1 heterogeneous nuclear ribonucleoprotein U like 1 2 2
MIRT476350 GIGYF1 GRB10 interacting GYF protein 1 2 2
MIRT477298 EPHB2 EPH receptor B2 2 2
MIRT477933 DPM2 dolichyl-phosphate mannosyltransferase subunit 2, regulatory 2 2
MIRT478282 DDX19A DEAD-box helicase 19A 2 4
MIRT478472 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478559 CTNND1 catenin delta 1 2 2
MIRT478618 CTDNEP1 CTD nuclear envelope phosphatase 1 2 2
MIRT478834 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 2
MIRT479007 COL5A1 collagen type V alpha 1 chain 2 2
MIRT479166 CLSPN claspin 2 2
MIRT482454 ADAR adenosine deaminase, RNA specific 2 4
MIRT483019 KHSRP KH-type splicing regulatory protein 2 4
MIRT483798 CYP2W1 cytochrome P450 family 2 subfamily W member 1 2 6
MIRT486087 SLC7A5 solute carrier family 7 member 5 2 4
MIRT486304 SIPA1 signal-induced proliferation-associated 1 2 2
MIRT486490 MYH11 myosin heavy chain 11 2 2
MIRT486881 TSPYL4 TSPY like 4 2 2
MIRT487125 NCOR2 nuclear receptor corepressor 2 2 2
MIRT487542 TM6SF2 transmembrane 6 superfamily member 2 2 4
MIRT487676 B3GALT5 beta-1,3-galactosyltransferase 5 2 4
MIRT489251 TTLL1 tubulin tyrosine ligase like 1 2 4
MIRT489276 RBM8A RNA binding motif protein 8A 2 8
MIRT489496 CRLF3 cytokine receptor like factor 3 2 4
MIRT489571 SSBP2 single stranded DNA binding protein 2 2 2
MIRT489694 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT490166 TMEM63C transmembrane protein 63C 2 2
MIRT491199 MLLT1 MLLT1, super elongation complex subunit 2 4
MIRT491260 DHX40 DEAH-box helicase 40 2 2
MIRT491385 HAUS3 HAUS augmin like complex subunit 3 2 2
MIRT491548 YAE1D1 Yae1 domain containing 1 2 2
MIRT492722 PHF12 PHD finger protein 12 2 2
MIRT493866 FAM73B mitoguardin 2 2 4
MIRT494549 BAK1 BCL2 antagonist/killer 1 2 2
MIRT498586 KRT8 keratin 8 2 2
MIRT498722 SNTN sentan, cilia apical structure protein 2 6
MIRT499982 HIST1H2BD histone cluster 1 H2B family member d 2 4
MIRT503414 SLC25A45 solute carrier family 25 member 45 2 6
MIRT508491 FTO FTO, alpha-ketoglutarate dependent dioxygenase 2 2
MIRT508877 METTL14 methyltransferase like 14 2 2
MIRT509622 RRP7A ribosomal RNA processing 7 homolog A 2 4
MIRT510104 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510139 PDGFRA platelet derived growth factor receptor alpha 2 4
MIRT510353 ZNF703 zinc finger protein 703 2 6
MIRT510620 TMEM167A transmembrane protein 167A 2 4
MIRT510786 SF3B3 splicing factor 3b subunit 3 2 6
MIRT511021 NRF1 nuclear respiratory factor 1 2 2
MIRT513925 GHITM growth hormone inducible transmembrane protein 2 2
MIRT514342 DNAH17 dynein axonemal heavy chain 17 2 4
MIRT515015 SUMF2 sulfatase modifying factor 2 2 2
MIRT515246 DUSP28 dual specificity phosphatase 28 2 2
MIRT516202 RPP30 ribonuclease P/MRP subunit p30 2 2
MIRT516435 ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 2 4
MIRT516666 ZNF860 zinc finger protein 860 2 4
MIRT518373 ZNF250 zinc finger protein 250 2 2
MIRT518930 LSG1 large 60S subunit nuclear export GTPase 1 2 2
MIRT519676 ZNF70 zinc finger protein 70 2 2
MIRT519902 ZFAND4 zinc finger AN1-type containing 4 2 4
MIRT519945 ZCCHC8 zinc finger CCHC-type containing 8 2 2
MIRT520321 UBXN2A UBX domain protein 2A 2 2
MIRT520606 TMEM41B transmembrane protein 41B 2 2
MIRT520663 TMEM11 transmembrane protein 11 2 2
MIRT520852 SUGT1 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone 2 2
MIRT521443 RAD51 RAD51 recombinase 2 2
MIRT521671 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 2
MIRT522281 NKAP NFKB activating protein 2 2
MIRT522333 NCKIPSD NCK interacting protein with SH3 domain 2 8
MIRT522535 MED28 mediator complex subunit 28 2 6
MIRT523478 GNG4 G protein subunit gamma 4 2 2
MIRT523672 FOPNL FGFR1OP N-terminal like 2 2
MIRT523715 FBXW2 F-box and WD repeat domain containing 2 2 4
MIRT523867 ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2 2 4
MIRT524043 DNAJC8 DnaJ heat shock protein family (Hsp40) member C8 2 2
MIRT524167 DFFA DNA fragmentation factor subunit alpha 2 2
MIRT524928 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT526825 PHC1 polyhomeotic homolog 1 2 2
MIRT531017 TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3 2 2
MIRT536085 MBOAT2 membrane bound O-acyltransferase domain containing 2 2 2
MIRT540681 BMP3 bone morphogenetic protein 3 2 2
MIRT541708 TMEM33 transmembrane protein 33 2 2
MIRT541755 KLF8 Kruppel like factor 8 2 2
MIRT541888 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT545714 SPTLC2 serine palmitoyltransferase long chain base subunit 2 2 2
MIRT559054 C19orf47 chromosome 19 open reading frame 47 2 4
MIRT561748 PLAGL2 PLAG1 like zinc finger 2 2 2
MIRT562365 ETV3 ETS variant 3 2 2
MIRT562821 GCFC2 GC-rich sequence DNA-binding factor 2 2 2
MIRT562900 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT564452 SLC35E2 solute carrier family 35 member E2 2 5
MIRT569111 ONECUT3 one cut homeobox 3 2 2
MIRT569224 SUSD1 sushi domain containing 1 2 2
MIRT570271 ARPC3 actin related protein 2/3 complex subunit 3 2 2
MIRT570498 TFIP11 tuftelin interacting protein 11 2 2
MIRT570844 GPRC5C G protein-coupled receptor class C group 5 member C 2 2
MIRT571311 TPCN2 two pore segment channel 2 2 2
MIRT572077 EXOC8 exocyst complex component 8 2 2
MIRT572116 DNAJC24 DnaJ heat shock protein family (Hsp40) member C24 2 2
MIRT573054 TRIB1 tribbles pseudokinase 1 2 2
MIRT573483 IQSEC3 IQ motif and Sec7 domain 3 2 2
MIRT573656 HES6 hes family bHLH transcription factor 6 2 2
MIRT574343 ZBTB37 zinc finger and BTB domain containing 37 2 2
MIRT576494 Slc35e2 solute carrier family 35, member E2 2 4
MIRT608033 UBLCP1 ubiquitin like domain containing CTD phosphatase 1 2 2
MIRT611326 NANOS1 nanos C2HC-type zinc finger 1 2 2
MIRT613660 KIAA1210 KIAA1210 2 2
MIRT615638 ATF6 activating transcription factor 6 2 2
MIRT618573 RRAD RRAD, Ras related glycolysis inhibitor and calcium channel regulator 2 2
MIRT618865 MBL2 mannose binding lectin 2 2 2
MIRT618962 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619172 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620298 AQP6 aquaporin 6 2 2
MIRT620683 RFTN2 raftlin family member 2 2 2
MIRT621637 UBXN2B UBX domain protein 2B 2 2
MIRT621993 STK4 serine/threonine kinase 4 2 2
MIRT622421 NUDT19 nudix hydrolase 19 2 2
MIRT622804 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT624786 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 2
MIRT624968 ZNF665 zinc finger protein 665 2 4
MIRT625479 SMAD9 SMAD family member 9 2 2
MIRT626594 ACAA2 acetyl-CoA acyltransferase 2 2 4
MIRT626708 TRIM65 tripartite motif containing 65 2 2
MIRT626975 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627489 STRIP2 striatin interacting protein 2 2 2
MIRT628505 ZNF878 zinc finger protein 878 2 2
MIRT628533 ZNF701 zinc finger protein 701 2 2
MIRT628591 TMEM251 transmembrane protein 251 2 2
MIRT628818 SLC25A34 solute carrier family 25 member 34 2 2
MIRT628896 IGSF6 immunoglobulin superfamily member 6 2 2
MIRT628958 UBE2D4 ubiquitin conjugating enzyme E2 D4 (putative) 2 2
MIRT629005 OSBPL10 oxysterol binding protein like 10 2 2
MIRT629059 KIF1C kinesin family member 1C 2 2
MIRT629192 PAPOLA poly(A) polymerase alpha 2 2
MIRT629346 TMPRSS11BNL TMPRSS11B N-terminal like, pseudogene 2 2
MIRT629447 WIZ widely interspaced zinc finger motifs 2 2
MIRT629696 XKR4 XK related 4 2 2
MIRT629737 SCD5 stearoyl-CoA desaturase 5 2 2
MIRT629896 SPATA5 spermatogenesis associated 5 2 2
MIRT629953 GLP2R glucagon like peptide 2 receptor 2 2
MIRT630023 MTL5 testis expressed metallothionein like protein 2 2
MIRT630181 TLN1 talin 1 2 2
MIRT630325 PAQR5 progestin and adipoQ receptor family member 5 2 2
MIRT630389 MYH9 myosin heavy chain 9 2 4
MIRT630695 EXTL3 exostosin like glycosyltransferase 3 2 2
MIRT631054 LINC00346 long intergenic non-protein coding RNA 346 2 2
MIRT631130 SYNJ2 synaptojanin 2 2 2
MIRT631374 COL4A3BP collagen type IV alpha 3 binding protein 2 2
MIRT631557 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT631615 PCDHB11 protocadherin beta 11 2 2
MIRT631935 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT632109 SSR1 signal sequence receptor subunit 1 2 2
MIRT632168 CCL22 C-C motif chemokine ligand 22 2 2
MIRT632445 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT632652 NAV1 neuron navigator 1 2 2
MIRT632688 MTMR10 myotubularin related protein 10 2 2
MIRT632828 IGF1 insulin like growth factor 1 2 2
MIRT632905 FRRS1 ferric chelate reductase 1 2 2
MIRT633027 DNAL1 dynein axonemal light chain 1 2 2
MIRT633379 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633440 KLLN killin, p53-regulated DNA replication inhibitor 2 2
MIRT633726 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT633832 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT633862 ATP6V1A ATPase H+ transporting V1 subunit A 2 2
MIRT634042 NUP155 nucleoporin 155 2 2
MIRT634266 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT634374 RAP2B RAP2B, member of RAS oncogene family 2 2
MIRT634439 PDE7A phosphodiesterase 7A 2 2
MIRT634573 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 2
MIRT634620 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT634693 DSEL dermatan sulfate epimerase-like 2 2
MIRT634768 CD3D CD3d molecule 2 2
MIRT635024 WWTR1 WW domain containing transcription regulator 1 2 2
MIRT635384 NHLRC2 NHL repeat containing 2 2 2
MIRT635577 TTC9C tetratricopeptide repeat domain 9C 2 2
MIRT635793 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT635837 ZNF264 zinc finger protein 264 2 2
MIRT636043 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT636070 ZNF280C zinc finger protein 280C 2 2
MIRT636697 ARSK arylsulfatase family member K 2 2
MIRT637438 ZNF324B zinc finger protein 324B 2 2
MIRT637582 PLD6 phospholipase D family member 6 2 2
MIRT637672 PPM1D protein phosphatase, Mg2+/Mn2+ dependent 1D 2 2
MIRT637887 SLC19A3 solute carrier family 19 member 3 2 4
MIRT638353 RBMS2 RNA binding motif single stranded interacting protein 2 2 4
MIRT638597 HINT1 histidine triad nucleotide binding protein 1 2 2
MIRT638821 CRTAP cartilage associated protein 2 2
MIRT638871 CEP97 centrosomal protein 97 2 4
MIRT639660 PPEF2 protein phosphatase with EF-hand domain 2 2 4
MIRT640200 TIMM50 translocase of inner mitochondrial membrane 50 2 2
MIRT641592 TNS4 tensin 4 2 2
MIRT644993 POLR2J3 RNA polymerase II subunit J3 2 2
MIRT645059 UQCRQ ubiquinol-cytochrome c reductase complex III subunit VII 2 2
MIRT646948 UPK3BL uroplakin 3B like 1 2 2
MIRT647306 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT648300 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 4
MIRT649043 SLC1A2 solute carrier family 1 member 2 2 2
MIRT649884 SLFN12L schlafen family member 12 like 2 2
MIRT650196 DOCK7 dedicator of cytokinesis 7 2 2
MIRT654789 PRICKLE1 prickle planar cell polarity protein 1 2 2
MIRT655667 NUP43 nucleoporin 43 2 2
MIRT655925 NDUFA4P1 NDUFA4, mitochondrial complex associated pseudogene 1 2 2
MIRT656433 MARCH6 membrane associated ring-CH-type finger 6 2 2
MIRT657713 GPC4 glypican 4 2 2
MIRT659302 CSTF1 cleavage stimulation factor subunit 1 2 2
MIRT659844 CAPZB capping actin protein of muscle Z-line beta subunit 2 2
MIRT660660 ANKFY1 ankyrin repeat and FYVE domain containing 1 2 2
MIRT661308 CPM carboxypeptidase M 2 2
MIRT661473 CHMP1B charged multivesicular body protein 1B 2 2
MIRT661906 EBNA1BP2 EBNA1 binding protein 2 2 2
MIRT662064 ZNF284 zinc finger protein 284 2 2
MIRT662491 ANGPT4 angiopoietin 4 2 2
MIRT662657 LRRC47 leucine rich repeat containing 47 2 2
MIRT662804 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT663164 FGFR1OP FGFR1 oncogene partner 2 2
MIRT663376 ZNF770 zinc finger protein 770 2 4
MIRT663418 ZNF607 zinc finger protein 607 2 2
MIRT663990 WDR75 WD repeat domain 75 2 2
MIRT664157 APOBEC3F apolipoprotein B mRNA editing enzyme catalytic subunit 3F 2 4
MIRT664489 POLR3K RNA polymerase III subunit K 2 2
MIRT665058 CCDC77 coiled-coil domain containing 77 2 2
MIRT665080 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT665420 WDR55 WD repeat domain 55 2 2
MIRT665716 TMTC1 transmembrane and tetratricopeptide repeat containing 1 2 2
MIRT665923 TBC1D19 TBC1 domain family member 19 2 4
MIRT666239 SLC38A7 solute carrier family 38 member 7 2 4
MIRT666840 PPTC7 PTC7 protein phosphatase homolog 2 2
MIRT667378 MOB1B MOB kinase activator 1B 2 2
MIRT667573 LONRF2 LON peptidase N-terminal domain and ring finger 2 2 2
MIRT667894 ING1 inhibitor of growth family member 1 2 2
MIRT667977 HECTD3 HECT domain E3 ubiquitin protein ligase 3 2 2
MIRT668197 GCNT4 glucosaminyl (N-acetyl) transferase 4, core 2 2 2
MIRT668279 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 2
MIRT668386 FAT3 FAT atypical cadherin 3 2 2
MIRT668444 FAM208A family with sequence similarity 208 member A 2 2
MIRT668998 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669180 CCNF cyclin F 2 2
MIRT669444 ATL3 atlastin GTPase 3 2 2
MIRT669661 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT669890 KIAA0754 KIAA0754 2 4
MIRT669973 SSR3 signal sequence receptor subunit 3 2 2
MIRT670153 SLC29A4 solute carrier family 29 member 4 2 2
MIRT670240 TRIM13 tripartite motif containing 13 2 2
MIRT670274 CBY3 chibby family member 3 2 2
MIRT670358 ULBP3 UL16 binding protein 3 2 4
MIRT670627 BVES blood vessel epicardial substance 2 2
MIRT670731 HOOK3 hook microtubule tethering protein 3 2 2
MIRT670770 TRIM66 tripartite motif containing 66 2 2
MIRT670913 DESI1 desumoylating isopeptidase 1 2 2
MIRT671216 CLSTN1 calsyntenin 1 2 2
MIRT671398 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671427 TOX4 TOX high mobility group box family member 4 2 2
MIRT671654 TRUB2 TruB pseudouridine synthase family member 2 2 4
MIRT671702 PMPCA peptidase, mitochondrial processing alpha subunit 2 2
MIRT672136 PLEKHH1 pleckstrin homology, MyTH4 and FERM domain containing H1 2 2
MIRT672395 SLC10A6 solute carrier family 10 member 6 2 2
MIRT672508 GGCX gamma-glutamyl carboxylase 2 2
MIRT672572 RNF24 ring finger protein 24 2 2
MIRT672789 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT673019 RBBP4 RB binding protein 4, chromatin remodeling factor 2 2
MIRT673190 C10orf76 chromosome 10 open reading frame 76 2 2
MIRT673372 ZNF124 zinc finger protein 124 2 2
MIRT673495 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 6
MIRT673852 CAPN7 calpain 7 2 2
MIRT673929 ZNF500 zinc finger protein 500 2 2
MIRT673986 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 2
MIRT674076 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT674123 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT674297 THAP5 THAP domain containing 5 2 2
MIRT674370 POLR3D RNA polymerase III subunit D 2 2
MIRT674641 NKRF NFKB repressing factor 2 2
MIRT674665 PLCE1 phospholipase C epsilon 1 2 2
MIRT674725 ZNF451 zinc finger protein 451 2 4
MIRT674779 NPR1 natriuretic peptide receptor 1 2 2
MIRT674889 RASSF9 Ras association domain family member 9 2 2
MIRT675017 SNX1 sorting nexin 1 2 2
MIRT675341 KLHL26 kelch like family member 26 2 2
MIRT675416 CLEC7A C-type lectin domain containing 7A 2 2
MIRT675497 HSD17B12 hydroxysteroid 17-beta dehydrogenase 12 2 2
MIRT675615 EHD2 EH domain containing 2 2 2
MIRT675735 AHR aryl hydrocarbon receptor 2 2
MIRT675857 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 2
MIRT675990 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT676213 TMEM91 transmembrane protein 91 2 2
MIRT676406 MRO maestro 2 2
MIRT677299 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT677387 PCNP PEST proteolytic signal containing nuclear protein 2 2
MIRT677859 ABI2 abl interactor 2 2 2
MIRT677965 ITGB3 integrin subunit beta 3 2 2
MIRT678175 CRCP CGRP receptor component 2 2
MIRT678273 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT678665 SCUBE3 signal peptide, CUB domain and EGF like domain containing 3 2 2
MIRT679003 TTC39B tetratricopeptide repeat domain 39B 2 2
MIRT679053 RMDN1 regulator of microtubule dynamics 1 2 2
MIRT679461 RHOF ras homolog family member F, filopodia associated 2 2
MIRT679513 RAB36 RAB36, member RAS oncogene family 2 2
MIRT679914 ZKSCAN3 zinc finger with KRAB and SCAN domains 3 2 2
MIRT680029 OSBPL2 oxysterol binding protein like 2 2 4
MIRT680245 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680279 AKIP1 A-kinase interacting protein 1 2 2
MIRT680499 PRIM2 DNA primase subunit 2 2 2
MIRT680586 ZNF573 zinc finger protein 573 2 2
MIRT680629 KIAA1456 KIAA1456 2 2
MIRT680819 ARL8B ADP ribosylation factor like GTPase 8B 2 2
MIRT680998 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT681122 INTS7 integrator complex subunit 7 2 2
MIRT681161 IBA57 IBA57 homolog, iron-sulfur cluster assembly 2 2
MIRT681221 DUSP19 dual specificity phosphatase 19 2 2
MIRT681304 IKZF3 IKAROS family zinc finger 3 2 2
MIRT681341 BRI3BP BRI3 binding protein 2 2
MIRT681608 F2RL2 coagulation factor II thrombin receptor like 2 2 2
MIRT681779 EIF4A3 eukaryotic translation initiation factor 4A3 2 2
MIRT681892 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682084 ITGA3 integrin subunit alpha 3 2 4
MIRT682139 SMS spermine synthase 2 2
MIRT682217 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT682367 PHACTR4 phosphatase and actin regulator 4 2 2
MIRT682535 EXOSC2 exosome component 2 2 2
MIRT682618 COX6B1 cytochrome c oxidase subunit 6B1 2 2
MIRT683643 ZNF695 zinc finger protein 695 2 2
MIRT684008 FOLR1 folate receptor 1 2 2
MIRT684442 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684855 ZNF749 zinc finger protein 749 2 2
MIRT684956 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685044 GEMIN4 gem nuclear organelle associated protein 4 2 2
MIRT685095 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685382 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT685456 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT685810 SLC27A1 solute carrier family 27 member 1 2 2
MIRT685913 MOCS3 molybdenum cofactor synthesis 3 2 2
MIRT686665 TMEM120B transmembrane protein 120B 2 2
MIRT686955 SFT2D2 SFT2 domain containing 2 2 2
MIRT687118 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT687739 KIAA1328 KIAA1328 2 2
MIRT688063 GLUL glutamate-ammonia ligase 2 2
MIRT688191 FNIP1 folliculin interacting protein 1 2 2
MIRT688769 CDH7 cadherin 7 2 2
MIRT688979 ATP6AP1 ATPase H+ transporting accessory protein 1 2 2
MIRT689572 NUDT7 nudix hydrolase 7 2 2
MIRT689683 TMPRSS12 transmembrane protease, serine 12 2 2
MIRT689930 MANSC1 MANSC domain containing 1 2 2
MIRT690089 PNMA2 paraneoplastic Ma antigen 2 2 2
MIRT690190 C5orf45 MRN complex interacting protein 2 2
MIRT690246 CAMLG calcium modulating ligand 2 2
MIRT690411 FAM71F2 family with sequence similarity 71 member F2 2 2
MIRT690840 DSN1 DSN1 homolog, MIS12 kinetochore complex component 2 2
MIRT690889 FUT2 fucosyltransferase 2 2 2
MIRT691107 ADIPOQ adiponectin, C1Q and collagen domain containing 2 2
MIRT691229 DFNB59 pejvakin 2 2
MIRT691300 ZNF681 zinc finger protein 681 2 2
MIRT691366 GP5 glycoprotein V platelet 2 2
MIRT691797 WARS tryptophanyl-tRNA synthetase 2 2
MIRT692142 CEP104 centrosomal protein 104 2 2
MIRT692572 NCMAP non-compact myelin associated protein 2 2
MIRT692649 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT692744 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT693092 SCNM1 sodium channel modifier 1 2 2
MIRT693296 SYTL3 synaptotagmin like 3 2 2
MIRT693392 ZNF460 zinc finger protein 460 2 2
MIRT693530 ZNF708 zinc finger protein 708 2 2
MIRT693562 PIGR polymeric immunoglobulin receptor 2 2
MIRT694492 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT694722 LLGL1 LLGL1, scribble cell polarity complex component 2 2
MIRT694866 ZNF417 zinc finger protein 417 2 2
MIRT695070 ZNF17 zinc finger protein 17 2 2
MIRT695451 COX18 COX18, cytochrome c oxidase assembly factor 2 2
MIRT695724 ZNF117 zinc finger protein 117 2 2
MIRT695898 MED16 mediator complex subunit 16 2 2
MIRT696244 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 2
MIRT696259 TACO1 translational activator of cytochrome c oxidase I 2 2
MIRT696512 C3 complement C3 2 2
MIRT696560 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696643 AGXT2 alanine--glyoxylate aminotransferase 2 2 2
MIRT696791 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT696819 PLLP plasmolipin 2 2
MIRT697088 GPKOW G-patch domain and KOW motifs 2 2
MIRT697153 INMT indolethylamine N-methyltransferase 2 2
MIRT697202 ZYG11A zyg-11 family member A, cell cycle regulator 2 2
MIRT697322 ZNF641 zinc finger protein 641 2 2
MIRT697578 YME1L1 YME1 like 1 ATPase 2 2
MIRT697619 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT698619 TES testin LIM domain protein 2 2
MIRT698804 STK38 serine/threonine kinase 38 2 2
MIRT698949 SPAST spastin 2 2
MIRT699083 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699430 SLC1A5 solute carrier family 1 member 5 2 2
MIRT699550 SIT1 signaling threshold regulating transmembrane adaptor 1 2 2
MIRT700324 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT700360 RAB33B RAB33B, member RAS oncogene family 2 2
MIRT700462 PURB purine rich element binding protein B 2 2
MIRT701677 MYADM myeloid associated differentiation marker 2 2
MIRT701757 MSL2 MSL complex subunit 2 2 2
MIRT701977 MIER3 MIER family member 3 2 2
MIRT703178 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT703203 GOLGA3 golgin A3 2 2
MIRT703359 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT703425 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703484 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT703590 FBXO45 F-box protein 45 2 2
MIRT703806 EVI5 ecotropic viral integration site 5 2 2
MIRT703915 EPG5 ectopic P-granules autophagy protein 5 homolog 2 2
MIRT704234 DHDDS dehydrodolichyl diphosphate synthase subunit 2 2
MIRT704646 CLCC1 chloride channel CLIC like 1 2 2
MIRT705151 C11orf58 chromosome 11 open reading frame 58 2 2
MIRT705480 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT705530 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705661 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706144 ZNF674 zinc finger protein 674 2 2
MIRT706473 SNX27 sorting nexin family member 27 2 2
MIRT708254 PGPEP1 pyroglutamyl-peptidase I 2 2
MIRT708838 SCAND3 zinc finger BED-type containing 9 1 1
MIRT710437 BTNL3 butyrophilin like 3 2 2
MIRT711325 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT716151 RBM48 RNA binding motif protein 48 2 2
MIRT717402 ZCCHC24 zinc finger CCHC-type containing 24 2 2
MIRT720866 ADCY5 adenylate cyclase 5 2 2
MIRT722226 ZNF503 zinc finger protein 503 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-1273h-5p Paclitaxel 36314 NSC125973 approved sensitive High Ovarian Cancer cell line (SKOV3)
hsa-miR-1273h-5p Tripterygium wilfordii Hook F resistant tissue
hsa-miR-1273h-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (MGC-803)

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