miRTarBase - #MIRT295049


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pre-miRNA Information
pre-miRNA hsa-mir-4280   
Genomic Coordinates chr5: 87114879 - 87114954
Description Homo sapiens miR-4280 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4280
Sequence 11| GAGUGUAGUUCUGAGCAGAGC |31
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1267452683 6 dbSNP
rs921418201 13 dbSNP
rs975577876 15 dbSNP
rs562687273 20 dbSNP
rs968639930 21 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol EVI5L   
Synonyms -
Description ecotropic viral integration site 5 like
Transcript NM_001159944   
Other Transcripts NM_145245   
Expression
Putative miRNA Targets on EVI5L
3'UTR of EVI5L
(miRNA target sites are highlighted)		 
>EVI5L|NM_001159944|3'UTR
   1 GGCCATGCCCAGCGCGCCCGGAGTCAGGAGGCCGCAGCCGCGGGGGGCGCCCGGGCAGTCCGCGTTCTGCTCCCCACCTG
  81 CCGCACTTGACAAACTACGCGCCCTCTGTGGCTCGGCCACCCCTAAAGCGAGGCCCGGCGAGGCAGCGCAGAGGGTAGGG
 161 TCCGACCTGGGCTCCTCAGGGCCCCGGGGCAGGCTCTCTATCCCCAGCAGTGTTTACCCATCTTGGTCTGTACCCCTCCG
 241 GGCCCTCTGGCGTTCCAGGGGTGCCTGGAGGGGCTGACTGCTCTCTTAACAGGAGGGCAGAGGGCAGGGGACAGACGACC
 321 CAGAGGTCCCAGCACTGAATGAGCAGGCAGCTCCCACCTCCTGGCAGGCTTCCTTCTGGGACAGGGGCGACATTGCTGGG
 401 AAGTGCTCAGGAGGTAGCCGAGGCCTGAGGAAGGAGAGCGCCAGCTCTGGGCTGGACATCAGCACCCCACAACACTCCTC
 481 GGGATGAAGTGACCCTTGACTAGCCCCTGGCCATCTCTAGGGGAGTCAGGCCGCTGGGGACAGATGGCCAGGCCGGCCTC
 561 TCCTGCCTGGCGCAGGCACCGTGGCCCCTGCAGCGGAAACCAAAGTCCCCCTACTATGTGCGGGGCGCCTGGGGACTGAG
 641 TGGCTAACGGGAAGCCTCCCTGCTTCTCTGGGGCCAGAGCAGCTTCCAGGAAGTGAAGAGACCCCTCTCCCCAGTGCCCC
 721 ACATCTTTCTCTGGGAGACACTCGCGCCCCCTATCCTGGCCAGTGATGGAGGGGTATCTCTACAGGGGTCCTCGGTCTCC
 801 ATCTACTTCCCTTTCTTCATGTGTTTCCAGCCCCACCCTCAGCCAGAGCCAGGCCCCCAGGCAGGAGCTTCCCAGCGAGC
 881 GGCCTCCCCTCACTTCCTCCTGGTGGTCCCGTTGTCTCTGCTGAATCAGAGCTGAGAACGGTGCCAAAATCCAACGATGC
 961 CCCCCAGGCCCCTTCCTCCCTTCCCCCGGCCCCCCGGGCCTCATGACCCTGGGGGCTGCCCCCCTCGGTGCTCCCGGAGC
1041 CTCCAGTAGAGTAGCGTCACAAGCAATCTCCCTGGCGCTTCCTGGGTGGGGACCCCTGCTCCGTCCCCGCTTCCTAGCTG
1121 CCCACTTTTCAGTGTTACGAAGCCTGGGGACCGGGGCAGGCACCCACGGGGCTCTCCACACGCCCCCTACACTGCCCGCC
1201 ACCATTTTGCACACTGCCTGTTCACATGTCGCCCAGGCGGGAAAAATGGAAAATAAAGTGTATTTACACAGTCAAAAAAA
1281 AAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgAGACGAGUCU---UGAUGUGAg 5'
            ||| | || :    ||||||| 
Target 5' gcTCTCCACACGCCCCCTACACTg 3'
 1171 - 1194 147.00 -11.70
2 
miRNA  3' cgAGACGAGUCUUGAUGUGAg 5'
            || || |   || ||||| 
Target 5' caTCAGCACCCCACAACACTc 3'
 457 - 477 123.00 -10.90
3 
miRNA  3' cgaGACGAGUCUUGAUGUGag 5'
             ||   || ||||||:|  
Target 5' gcaCTTGACA-AACTACGCgc 3'
 83 - 102 117.00 -10.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31577169 39 COSMIC
COSN30541339 43 COSMIC
COSN31572320 62 COSMIC
COSN22071864 78 COSMIC
COSN30157886 83 COSMIC
COSN31557255 84 COSMIC
COSN23832525 102 COSMIC
COSN8606751 116 COSMIC
COSN31565824 137 COSMIC
COSN24201340 150 COSMIC
COSN31544618 202 COSMIC
COSN26635908 213 COSMIC
COSN19657251 317 COSMIC
COSN29468508 628 COSMIC
COSN31592993 767 COSMIC
COSN30539225 940 COSMIC
COSN7451886 941 COSMIC
COSN31523387 949 COSMIC
COSN31541330 957 COSMIC
COSN22632530 984 COSMIC
COSN31576819 1104 COSMIC
COSN8262981 1131 COSMIC
COSN30162983 1140 COSMIC
COSN31579207 1232 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1285587997 3 dbSNP
rs1447007877 4 dbSNP
rs1217390471 7 dbSNP
rs1182534376 8 dbSNP
rs1239985511 9 dbSNP
rs546488739 14 dbSNP
rs565797924 14 dbSNP
rs1448546896 15 dbSNP
rs984226528 16 dbSNP
rs1173547150 17 dbSNP
rs927060574 17 dbSNP
rs1477159245 19 dbSNP
rs1260637777 20 dbSNP
rs1386809366 24 dbSNP
rs992647263 26 dbSNP
rs917105772 27 dbSNP
rs990516966 32 dbSNP
rs556609739 34 dbSNP
rs1408715575 36 dbSNP
rs1207850408 38 dbSNP
rs945908525 40 dbSNP
rs1402509533 41 dbSNP
rs1316376053 42 dbSNP
rs769102863 43 dbSNP
rs1436917117 44 dbSNP
rs1453598929 46 dbSNP
rs1338967442 49 dbSNP
rs746284773 50 dbSNP
rs977515644 53 dbSNP
rs1341282732 55 dbSNP
rs377029692 63 dbSNP
rs138216298 64 dbSNP
rs1359123731 65 dbSNP
rs1335235666 67 dbSNP
rs933470126 74 dbSNP
rs1421000894 75 dbSNP
rs1169602250 77 dbSNP
rs1323361751 84 dbSNP
rs936015356 87 dbSNP
rs1050882949 89 dbSNP
rs889195484 92 dbSNP
rs1050707504 93 dbSNP
rs889334085 96 dbSNP
rs1456321808 99 dbSNP
rs942390395 99 dbSNP
rs1009412039 100 dbSNP
rs868689848 101 dbSNP
rs865808491 102 dbSNP
rs562250919 104 dbSNP
rs994344411 107 dbSNP
rs1226720057 114 dbSNP
rs953833762 116 dbSNP
rs993678597 117 dbSNP
rs1454911120 121 dbSNP
rs1027855541 128 dbSNP
rs527770408 129 dbSNP
rs1002658775 131 dbSNP
rs541248648 134 dbSNP
rs1005200295 135 dbSNP
rs1034459631 137 dbSNP
rs958838200 138 dbSNP
rs1422782275 139 dbSNP
rs2288430 140 dbSNP
rs992580385 141 dbSNP
rs1471121773 148 dbSNP
rs1024109587 150 dbSNP
rs912279856 157 dbSNP
rs967194809 161 dbSNP
rs966780017 162 dbSNP
rs1189468526 180 dbSNP
rs533067282 182 dbSNP
rs925872592 182 dbSNP
rs935944008 184 dbSNP
rs549618209 186 dbSNP
rs977538099 187 dbSNP
rs923350215 189 dbSNP
rs954864773 190 dbSNP
rs986265935 193 dbSNP
rs569611024 195 dbSNP
rs944755735 196 dbSNP
rs910822436 197 dbSNP
rs1375042420 199 dbSNP
rs2288429 201 dbSNP
rs897949814 205 dbSNP
rs929475043 206 dbSNP
rs1417737908 211 dbSNP
rs1379653461 212 dbSNP
rs1049244373 214 dbSNP
rs1420712610 219 dbSNP
rs1252921389 222 dbSNP
rs1189624916 228 dbSNP
rs1488286035 231 dbSNP
rs1037936488 235 dbSNP
rs548684579 237 dbSNP
rs1352109712 239 dbSNP
rs1285992379 240 dbSNP
rs888022834 244 dbSNP
rs1319177969 246 dbSNP
rs919611372 252 dbSNP
rs929650363 253 dbSNP
rs1355709210 258 dbSNP
rs1299654155 260 dbSNP
rs1433673356 263 dbSNP
rs1046836275 268 dbSNP
rs1345782156 271 dbSNP
rs748097181 272 dbSNP
rs1273645039 273 dbSNP
rs1304395752 279 dbSNP
rs565794452 291 dbSNP
rs906921397 297 dbSNP
rs534389077 298 dbSNP
rs1159247945 304 dbSNP
rs1455287137 306 dbSNP
rs1055530724 309 dbSNP
rs1375663371 311 dbSNP
rs554420054 318 dbSNP
rs1316311566 322 dbSNP
rs1432780793 322 dbSNP
rs1195376115 325 dbSNP
rs1033979982 327 dbSNP
rs894291325 330 dbSNP
rs1201659628 341 dbSNP
rs1487383766 361 dbSNP
rs894140944 365 dbSNP
rs1011936185 366 dbSNP
rs1439689476 382 dbSNP
rs1021535855 389 dbSNP
rs1024057041 390 dbSNP
rs571020306 396 dbSNP
rs537745377 401 dbSNP
rs556945170 404 dbSNP
rs1339191771 412 dbSNP
rs1318421176 414 dbSNP
rs1030429514 420 dbSNP
rs749804415 421 dbSNP
rs769230312 423 dbSNP
rs986314948 426 dbSNP
rs1474882137 433 dbSNP
rs1470170759 438 dbSNP
rs1430230337 440 dbSNP
rs142824477 441 dbSNP
rs542244833 442 dbSNP
rs1403148371 443 dbSNP
rs1449202198 451 dbSNP
rs1254743051 452 dbSNP
rs963562395 458 dbSNP
rs974095391 463 dbSNP
rs1365543554 479 dbSNP
rs1316944246 484 dbSNP
rs200910113 484 dbSNP
rs572524484 511 dbSNP
rs976094617 515 dbSNP
rs1305344536 516 dbSNP
rs1338604871 517 dbSNP
rs919325196 518 dbSNP
rs541125761 523 dbSNP
rs1407944314 531 dbSNP
rs1329065577 533 dbSNP
rs1049201150 534 dbSNP
rs546599951 536 dbSNP
rs1271038832 537 dbSNP
rs1341693770 542 dbSNP
rs1226710581 546 dbSNP
rs1046678953 548 dbSNP
rs924932657 553 dbSNP
rs1291063023 554 dbSNP
rs938457654 555 dbSNP
rs1367228689 556 dbSNP
rs1055457212 558 dbSNP
rs1445779087 563 dbSNP
rs1245297705 567 dbSNP
rs1055776391 572 dbSNP
rs1457016098 573 dbSNP
rs1273332633 580 dbSNP
rs563942510 582 dbSNP
rs1224548576 583 dbSNP
rs1024005001 586 dbSNP
rs947238504 595 dbSNP
rs772605371 596 dbSNP
rs903067208 604 dbSNP
rs998872080 608 dbSNP
rs1335416147 609 dbSNP
rs1032809016 610 dbSNP
rs1411866162 611 dbSNP
rs1388742295 614 dbSNP
rs957441820 618 dbSNP
rs1387588047 621 dbSNP
rs145061684 622 dbSNP
rs1017938129 623 dbSNP
rs112861850 627 dbSNP
rs976042638 628 dbSNP
rs1007675755 634 dbSNP
rs1266110045 635 dbSNP
rs1017679449 638 dbSNP
rs919273343 641 dbSNP
rs963919149 650 dbSNP
rs563275757 652 dbSNP
rs1026990776 654 dbSNP
rs568511274 661 dbSNP
rs749764132 661 dbSNP
rs1281061603 662 dbSNP
rs1444699274 668 dbSNP
rs1329533207 669 dbSNP
rs1302666181 696 dbSNP
rs529151403 699 dbSNP
rs938175186 710 dbSNP
rs1157311061 712 dbSNP
rs1400631808 719 dbSNP
rs1409247238 728 dbSNP
rs982311469 730 dbSNP
rs1160633043 736 dbSNP
rs1383409938 737 dbSNP
rs1055320349 744 dbSNP
rs1382048482 745 dbSNP
rs371605043 746 dbSNP
rs949627029 747 dbSNP
rs1328443871 752 dbSNP
rs1215057775 768 dbSNP
rs1447492817 769 dbSNP
rs928333032 770 dbSNP
rs1314473254 775 dbSNP
rs1360346745 782 dbSNP
rs902851526 788 dbSNP
rs998583739 794 dbSNP
rs938343395 795 dbSNP
rs1347538660 797 dbSNP
rs1349833475 800 dbSNP
rs991687979 802 dbSNP
rs1205535418 803 dbSNP
rs915626737 810 dbSNP
rs1430701256 813 dbSNP
rs548981688 816 dbSNP
rs773314061 819 dbSNP
rs1320722806 820 dbSNP
rs947217631 832 dbSNP
rs1176798098 835 dbSNP
rs1042869622 836 dbSNP
rs1007788079 837 dbSNP
rs1185401011 838 dbSNP
rs903119769 850 dbSNP
rs1017420863 853 dbSNP
rs965906264 859 dbSNP
rs997406766 860 dbSNP
rs1026238616 862 dbSNP
rs1325896740 866 dbSNP
rs1276428365 871 dbSNP
rs1214017665 874 dbSNP
rs950710921 877 dbSNP
rs984847494 878 dbSNP
rs1243359996 881 dbSNP
rs934586265 882 dbSNP
rs909268873 887 dbSNP
rs1176197771 899 dbSNP
rs1051665547 911 dbSNP
rs890493870 912 dbSNP
rs1409982836 929 dbSNP
rs517084 931 dbSNP
rs1018107999 932 dbSNP
rs1042672752 937 dbSNP
rs528200912 940 dbSNP
rs368675151 941 dbSNP
rs2307000 944 dbSNP
rs1054153311 950 dbSNP
rs892865814 955 dbSNP
rs765967133 956 dbSNP
rs1026458503 957 dbSNP
rs1007323350 960 dbSNP
rs1038820629 960 dbSNP
rs1316211790 961 dbSNP
rs557334350 962 dbSNP
rs982363361 964 dbSNP
rs1336393310 966 dbSNP
rs901686548 967 dbSNP
rs1442476945 969 dbSNP
rs1355832160 977 dbSNP
rs1162064141 983 dbSNP
rs1454687106 983 dbSNP
rs1035233112 988 dbSNP
rs1304913702 989 dbSNP