pre-miRNA Information
pre-miRNA hsa-mir-367   
Genomic Coordinates chr4: 112647874 - 112647941
Synonyms MIRN367, hsa-mir-367, MIR367
Description Homo sapiens miR-367 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-367-3p
Sequence 44| AAUUGCACUUUAGCAAUGGUGA |65
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN24411246 17 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs535597757 1 dbSNP
rs1013348949 11 dbSNP
rs896333735 12 dbSNP
rs751269136 14 dbSNP
rs1163501507 16 dbSNP
rs757092597 21 dbSNP
Putative Targets

Gene Information
Gene Symbol SLC12A5   
Synonyms EIEE34, EIG14, KCC2, hKCC2
Description solute carrier family 12 member 5
Transcript NM_001134771   
Other Transcripts NM_020708   
Expression
Putative miRNA Targets on SLC12A5
3'UTR of SLC12A5
(miRNA target sites are highlighted)
>SLC12A5|NM_001134771|3'UTR
   1 GAACCAGGACCTGCCACCCGGGCCCGAGCGCGCCCGGCCCGCGGCTCCGGAGCCCTCGCCGCGCCCCCCGCCGCTGTCAC
  81 CGTTTACATACAGACCCTGTGCCCGTGTCCTGGCCCCTTACCCCGCTGCCTGAAGCCCGGAGGCCACGCCTGTTGGGGCT
 161 GATTCGGAGAGGGCGCCCCGCCGCGCAGAGACCAGAGCTCCTCAGTGCCAGTTTGGCCCCTGGGTCTTCGCTGCCCTTTT
 241 TCTAAGCCCGGCCTCGTCTCGCCGGAGGAGACGCTGCAATAAAGGTTGGGAGAAGGCGCGGAAAGGAGAGGAGCTGGGGC
 321 CTTGGGGACCCCCAGGTAGTCCATGCGGCCCATTCCTCCCCTTCCCACTCCCGCCGCGGTCCTCGCTCTGCGCTCCTCCG
 401 GCGCTGCTCCCTGGCTCCCGGCGGCCCGGAGGCCCGCGGGGTGGGAAGGCCGCGCTTGCCGTCTCCGCCGCCCCTTCTCG
 481 CCGAGCCGTGGGGCGCGGGCGGCCGAGCCTATACATAGTGTACAGGAGACATCGCGTGTATTTTTAACGTCCCCATATTT
 561 ATGTGACTAGAAGCGCAACAGACTTCTCGCCATAGTCGAGCTCTCCCGCTGGGGGCACTGCGGGGAGGCGAGGCCTCGGG
 641 AAGCTGAATTTTCCTTGACGTCCAAGAGTTTGAGAGCGAAAGTGCTTTAGGCCCAGGCGGGGGTCGTGGCCTCGTTCCCT
 721 CGACACCTCCGTCCTGCTCTCGCCTCTTCGCCCTTTCCGCGCGCCCTTGGCTTCCCACCCTCCTCTCCAGTCCTTTTCCG
 801 AGATGAGGTGAGACAAGGGTCCAACTTTTCCTGGATTCGCCTCCCAGCGGACGTGAGCTTCCACTGCGGCTGCAGAGACG
 881 CGAGCAACCTCTTCTCATCGGCTCTTATGCAAGTTGGGGCCAGGATAGGGGAGGGGTGCTCCTCAAGAGGAAGAAACCGA
 961 GAGGCCCGCGCCCCACCGAGGAAGCCCCGCCCCGGTGCCTTCGCTGGGGAGCAGGCGTCTCTCCTCAGTCGGCTTGTCGC
1041 CTGCTCCCCGTATCCCATGGCTCCTCGCCAAAGACTGAAATTGTGGAGCTGGAGGGCGCCCCCTCCCCGGAGTTTCCTCC
1121 CTGGGACAAGTGAGGGAGGAGGGGGCCGATTCTGGTTTAGGGGCCGGACCCACTGAGAGGCCCCAGAGCCGCCCGTGATG
1201 TTCCTCCCCCGTCCCCATCTGGCAGCTCCTGTCTCGCCTGAGGGACCCAGCCGCCTTCTCCGTGCTCTGGGGCCGGGCCT
1281 CGCTGCTTAGCAGCGGCCTCTAGCTCCGTCTCCCGGGGACCTGGGCCTGAGGGAGGGCTGGAGTCGCACGCGCTTTGTCC
1361 TTAGCGCCTGTCTGCTCTCCTCTAACTAGGACCCAGGGCCTTTGGCTTCCCCAGCTCATCCTTGGCCCTTCCGCTCCACC
1441 AGCCTGGTCTGAGGCGTGCTCTGTCCTTAGAGAAGGCGCGGTGGCCGGGTTCCCTTCCCCTAGGGCACATTACTAAGGGG
1521 GTCAGGCACTGCATGCTCGTTCCAGCACCATCTGGGACTGGGTACAGTACCTCCAGCCCCAGGGCCCTGACCTGCGCACC
1601 TAGCTTGACATCTCACGCACCTCCCAGAGCTGGCGCCACTGAGTAATCCGGACCTCACCACCTCTTTTCCTTTGAGCCCA
1681 AGGCAGAGCTGGAGCTGGCGCCACCCAGACAGCGTCAGGTGTGGCTGGGGTAGGTTTGGAGGTCTGCCAGTTACACCAAG
1761 TCCCCTCTGAGATTCGATCAGGGGACTGGATAGATTCTTTCAGGTACTCAATCAGGAAGCTGGAGGTGTTAGACACCAGC
1841 CCCCTGCATCCTTCAGTAGACCTCCCTCTGAACACCACAGCCAGGTCCTGCCTTCTGGGGGCCTGAATATTCCAGAGCTG
1921 ATGTGATGGGCTGTGCAGAAGGGGGCTGTATCAACATCAATTAGGGAACCAAAGTTGCACTATCTGGGCCCAGATTGTCT
2001 GGTTGGCAAGAGCAAAGTTTCCGTTGATGAAACAGACATCCCACAACAAAAACCCAAGTTTTCTGTGCTACATGTGCAAT
2081 ATTTGTTATGAATGTTATCACAAGTCATTCATCAAGTTATCTTTATAATCACTGTAGTTAGATGTTTCATGTCCATTCAA
2161 GTGACTTTTATTCTGAGTGCAATATTTCAATAGCCTTGTAGTGATAACTAGTGTTGCTTTTGTTTTAGATGATCTATGTG
2241 CAGGGCAATGCAATGAAGTTGAAAACCCTTGTAAATAGGAGAGGTTGCAAACCAAATCAAGAGTATTTATTACTATTACT
2321 GCTATTATTATTAGGCCTGCCTTTAATTTTCAGTGTAAGTGTTCAGTATGCCGCATCCTGCCTCAGTATTGATCTTGTGT
2401 TCTTTGTGCCAATATGAAAAGGAGAGGGTTGGTTCTTTCCTTTATTGTTGAATGCTCCCATTTAATGCTTTATGGCTTTT
2481 ACTGTATTACTTTTTTAGACTCCCGTCTGCACAAAATGCAATAAAAATAATTTTATTATACCCTTAAAAAAAAAAAAAAA
2561 AAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' agugguaACGAU-UUCACGUUAa 5'
                 ||||| | ||||||| 
Target 5' ttttctgTGCTACATGTGCAATa 3'
2059 - 2081 159.00 -11.30
2
miRNA  3' aguGGUAACGAUUUCACGUUAa 5'
             ::||| || :|||||||| 
Target 5' cttTTATT-CT-GAGTGCAATa 3'
2165 - 2184 157.00 -10.20
3
miRNA  3' aguGGUA-ACG-AUUUCACGUUAa 5'
             ||:| |||  ||| |||||| 
Target 5' ctcCCGTCTGCACAAAATGCAATa 3'
2500 - 2523 135.00 -9.80
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1176426 1032 ClinVar
COSN30481785 9 COSMIC
COSN28886509 24 COSMIC
COSN30110722 31 COSMIC
COSN30152887 32 COSMIC
COSN30499777 37 COSMIC
COSN30649994 38 COSMIC
COSN26994842 44 COSMIC
COSN1249512 46 COSMIC
COSN28860269 55 COSMIC
COSN30607837 57 COSMIC
COSN8611032 58 COSMIC
COSN30700953 61 COSMIC
COSN18015380 64 COSMIC
COSN32055583 273 COSMIC
COSN10016621 291 COSMIC
COSN30539018 325 COSMIC
COSN26679133 328 COSMIC
COSN31579214 343 COSMIC
COSN28822826 381 COSMIC
COSN17641544 417 COSMIC
COSN16570645 421 COSMIC
COSN25644067 430 COSMIC
COSN31591641 535 COSMIC
COSN26562297 582 COSMIC
COSN28776049 650 COSMIC
COSN30541312 663 COSMIC
COSN31961862 683 COSMIC
COSN28670006 762 COSMIC
COSN194356 803 COSMIC
COSN32063831 850 COSMIC
COSN1873802 867 COSMIC
COSN1873804 868 COSMIC
COSN24307018 990 COSMIC
COSN26679311 1018 COSMIC
COSN28816316 1146 COSMIC
COSN32065253 1330 COSMIC
COSN14488919 1675 COSMIC
COSN20116499 1691 COSMIC
COSN28202214 1700 COSMIC
COSN21363798 1729 COSMIC
COSN17449195 1732 COSMIC
COSN31480464 1882 COSMIC
COSN26552464 1902 COSMIC
COSN32065254 1921 COSMIC
COSN21661038 2011 COSMIC
COSN18723576 2053 COSMIC
COSN28698679 2059 COSMIC
COSN31596506 2137 COSMIC
COSN17596285 2301 COSMIC
COSN27300309 2314 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1312388131 3 dbSNP
rs1451287979 7 dbSNP
rs749721085 13 dbSNP
rs1229655299 15 dbSNP
rs764162679 17 dbSNP
rs1382840984 18 dbSNP
rs754794847 20 dbSNP
rs936256463 20 dbSNP
rs370781928 21 dbSNP
rs1198335553 22 dbSNP
rs1256574566 24 dbSNP
rs950730264 26 dbSNP
rs1205867261 27 dbSNP
rs1264906211 29 dbSNP
rs779634251 30 dbSNP
rs1482343741 31 dbSNP
rs772208578 33 dbSNP
rs372071218 34 dbSNP
rs200685391 36 dbSNP
rs373337754 42 dbSNP
rs1421432026 43 dbSNP
rs762799481 44 dbSNP
rs1333486584 49 dbSNP
rs766289936 50 dbSNP
rs1189669230 51 dbSNP
rs1416163596 53 dbSNP
rs1042189958 56 dbSNP
rs1209194231 59 dbSNP
rs965559082 61 dbSNP
rs943227952 64 dbSNP
rs1356214915 65 dbSNP
rs1289184369 67 dbSNP
rs1359686684 69 dbSNP
rs1399355787 73 dbSNP
rs976600551 74 dbSNP
rs1428037020 77 dbSNP
rs374934758 82 dbSNP
rs1318808185 90 dbSNP
rs1383732917 96 dbSNP
rs1176912020 98 dbSNP
rs1379759021 100 dbSNP
rs1363429186 105 dbSNP
rs932416786 106 dbSNP
rs1424654908 107 dbSNP
rs1162671667 111 dbSNP
rs1042836040 114 dbSNP
rs532098538 115 dbSNP
rs6065914 118 dbSNP
rs1165133579 121 dbSNP
rs894950630 121 dbSNP
rs1373014198 122 dbSNP
rs543856248 125 dbSNP
rs562551043 128 dbSNP
rs1027555820 130 dbSNP
rs6032640 131 dbSNP
rs1332647008 151 dbSNP
rs1490431561 153 dbSNP
rs934332398 155 dbSNP
rs1403160480 158 dbSNP
rs529889414 160 dbSNP
rs950809133 166 dbSNP
rs1338126426 171 dbSNP
rs749741363 172 dbSNP
rs548232296 176 dbSNP
rs966099844 180 dbSNP
rs1302383941 181 dbSNP
rs896054557 183 dbSNP
rs560371070 184 dbSNP
rs373853039 186 dbSNP
rs546694229 189 dbSNP
rs1325703806 191 dbSNP
rs1408308950 198 dbSNP
rs906061954 199 dbSNP
rs1331686464 202 dbSNP
rs1168550188 209 dbSNP
rs557169399 211 dbSNP
rs1427813726 219 dbSNP
rs974762542 230 dbSNP
rs1027700020 250 dbSNP
rs950697624 251 dbSNP
rs1201941062 253 dbSNP
rs757850321 254 dbSNP
rs1273145897 255 dbSNP
rs552617329 256 dbSNP
rs1321398655 264 dbSNP
rs1314389330 269 dbSNP
rs1319703650 274 dbSNP
rs1019393181 277 dbSNP
rs1223901566 285 dbSNP
rs756261401 288 dbSNP
rs570814668 296 dbSNP
rs745964787 298 dbSNP
rs921071825 306 dbSNP
rs1329703834 309 dbSNP
rs939097565 312 dbSNP
rs953861982 333 dbSNP
rs978483386 347 dbSNP
rs1470518696 348 dbSNP
rs894997261 352 dbSNP
rs1175816082 355 dbSNP
rs368240368 356 dbSNP
rs1233084771 363 dbSNP
rs1179984955 373 dbSNP
rs1254271965 374 dbSNP
rs1423451429 375 dbSNP
rs925704232 380 dbSNP
rs934424840 385 dbSNP
rs1204169619 387 dbSNP
rs1171917753 388 dbSNP
rs1313861891 389 dbSNP
rs1426194164 389 dbSNP
rs1464568433 392 dbSNP
rs1281939466 396 dbSNP
rs1222995397 397 dbSNP
rs1170536246 400 dbSNP
rs1052751248 401 dbSNP
rs930481985 402 dbSNP
rs1353451265 403 dbSNP
rs1380606495 411 dbSNP
rs1336134102 418 dbSNP
rs538352975 420 dbSNP
rs950319827 421 dbSNP
rs1045053113 423 dbSNP
rs905994975 424 dbSNP
rs1400432233 425 dbSNP
rs994987072 428 dbSNP
rs1160042670 429 dbSNP
rs1442265585 436 dbSNP
rs1376588636 439 dbSNP
rs550242207 441 dbSNP
rs1038977717 443 dbSNP
rs568609787 445 dbSNP
rs1413782129 450 dbSNP
rs1049106919 452 dbSNP
rs886513974 454 dbSNP
rs1004715132 455 dbSNP
rs1004947407 459 dbSNP
rs1018944874 468 dbSNP
rs1018906633 470 dbSNP
rs1214828297 474 dbSNP
rs751917120 480 dbSNP
rs923072022 483 dbSNP
rs1317246954 485 dbSNP
rs536025755 486 dbSNP
rs1287032955 487 dbSNP
rs554202181 488 dbSNP
rs998073449 501 dbSNP
rs996234735 502 dbSNP
rs933159369 505 dbSNP
rs1028677388 508 dbSNP
rs1396664018 509 dbSNP
rs1287562959 512 dbSNP
rs953830420 515 dbSNP
rs1312862156 518 dbSNP
rs1361518234 519 dbSNP
rs1422407118 520 dbSNP
rs1029058485 522 dbSNP
rs957801388 525 dbSNP
rs1254329567 526 dbSNP
rs1417308751 550 dbSNP
rs34116575 551 dbSNP
rs1185806515 554 dbSNP
rs1486139068 556 dbSNP
rs1265112801 561 dbSNP
rs978576873 563 dbSNP
rs1219968729 576 dbSNP
rs1032868116 577 dbSNP
rs1489937235 580 dbSNP
rs1485491740 582 dbSNP
rs955770740 589 dbSNP
rs988997811 598 dbSNP
rs1265827452 600 dbSNP
rs1323539617 601 dbSNP
rs990326292 603 dbSNP
rs772304514 609 dbSNP
rs1477025442 610 dbSNP
rs1193584963 616 dbSNP
rs916886092 619 dbSNP
rs1403480813 623 dbSNP
rs1364592148 624 dbSNP
rs1293689623 625 dbSNP
rs1459010377 626 dbSNP
rs967664074 628 dbSNP
rs372443511 637 dbSNP
rs927633673 643 dbSNP
rs1425669068 645 dbSNP
rs1177687904 649 dbSNP
rs770605147 653 dbSNP
rs1479949818 654 dbSNP
rs949757711 656 dbSNP
rs980358328 660 dbSNP
rs559653865 662 dbSNP
rs1489576288 664 dbSNP
rs1356897661 666 dbSNP
rs1249733450 677 dbSNP
rs868757934 678 dbSNP
rs186924495 683 dbSNP
rs990598587 685 dbSNP
rs1342176372 688 dbSNP
rs1280587835 703 dbSNP
rs1222076661 704 dbSNP
rs1397845856 707 dbSNP
rs916326937 715 dbSNP
rs1302383245 723 dbSNP
rs1368302121 727 dbSNP
rs776054467 730 dbSNP
rs927564296 735 dbSNP
rs1048886678 740 dbSNP
rs775623932 742 dbSNP
rs1049202097 750 dbSNP
rs1465636830 751 dbSNP
rs1402376925 753 dbSNP
rs1174130529 758 dbSNP
rs886235490 761 dbSNP
rs886648278 762 dbSNP
rs940771368 763 dbSNP
rs1200698715 766 dbSNP
rs1435200428 777 dbSNP
rs1040242906 781 dbSNP
rs747961455 791 dbSNP
rs1260587827 793 dbSNP
rs1347185802 800 dbSNP
rs1217666835 802 dbSNP
rs539717994 804 dbSNP
rs558132074 811 dbSNP
rs1487517813 814 dbSNP
rs6032641 819 dbSNP
rs1012042158 824 dbSNP
rs1029022456 825 dbSNP
rs1479311820 840 dbSNP
rs1305764586 843 dbSNP
rs112641038 844 dbSNP
rs1000152518 851 dbSNP
rs1378411697 853 dbSNP
rs967516738 854 dbSNP
rs1032835471 869 dbSNP
rs562598497 875 dbSNP
rs955863663 879 dbSNP
rs1402818466 881 dbSNP
rs574571814 882 dbSNP
rs960396401 890 dbSNP
rs990501010 895 dbSNP
rs745399627 901 dbSNP
rs1158235564 905 dbSNP
rs1024496245 909 dbSNP
rs371016586 911 dbSNP
rs1240143607 924 dbSNP
rs1181818391 929 dbSNP
rs1442404617 932 dbSNP
rs1257404920 933 dbSNP
rs971060518 935 dbSNP
rs1348933503 940 dbSNP
rs1259807210 943 dbSNP
rs1158878877 944 dbSNP
rs1362130071 947 dbSNP
rs1240485636 960 dbSNP
rs1417479531 963 dbSNP
rs1312366658 965 dbSNP
rs1244588332 966 dbSNP
rs1341011147 967 dbSNP
rs1336022346 970 dbSNP
rs769353411 972 dbSNP
rs980164203 977 dbSNP
rs111420419 978 dbSNP
rs930894805 979 dbSNP
rs923183664 987 dbSNP
rs867939849 989 dbSNP
rs530298454 990 dbSNP
rs762267426 992 dbSNP
rs1272964664 996 dbSNP
rs1050457274 1003 dbSNP
rs1190162176 1004 dbSNP
rs762830133 1009 dbSNP
rs908015402 1014 dbSNP
rs1445752751 1017 dbSNP
rs1262970579 1018 dbSNP
rs1217804229 1026 dbSNP
rs940872435 1029 dbSNP
rs1040431286 1035 dbSNP
rs893097836 1037 dbSNP
rs113570388 1039 dbSNP
rs548402869 1041 dbSNP
rs903382785 1046 dbSNP
rs1351860368 1047 dbSNP
rs1050853784 1048 dbSNP
rs570010235 1049 dbSNP
rs568524737 1055 dbSNP
rs1301481186 1056 dbSNP
rs552461518 1062 dbSNP
rs564515558 1067 dbSNP
rs531737622 1068 dbSNP
rs1000077817 1071 dbSNP
rs1474751151 1078 dbSNP
rs1220042134 1081 dbSNP
rs958948494 1098 dbSNP
rs1194865673 1099 dbSNP
rs1458596077 1101 dbSNP
rs1178785497 1102 dbSNP
rs1013550163 1103 dbSNP
rs1266373217 1104 dbSNP
rs373972366 1104 dbSNP
rs550034476 1106 dbSNP
rs766336928 1109 dbSNP
rs1220316698 1110 dbSNP
rs1023311007 1111 dbSNP
rs1291481837 1118 dbSNP
rs891613443 1121 dbSNP
rs568525917 1122 dbSNP
rs1010499645 1123 dbSNP
rs1317232743 1123 dbSNP
rs1258553875 1128 dbSNP
rs1414301325 1135 dbSNP
rs1024172216 1138 dbSNP
rs1323816439 1141 dbSNP
rs1393724870 1143 dbSNP
rs971536766 1146 dbSNP
rs984579043 1149 dbSNP
rs1436076606 1153 dbSNP
rs1333494175 1156 dbSNP
rs1325679897 1160 dbSNP
rs907616764 1162 dbSNP
rs1374737671 1167 dbSNP
rs535544552 1168 dbSNP
rs1400221585 1180 dbSNP
rs1284962815 1182 dbSNP
rs1001332584 1184 dbSNP
rs1427703750 1185 dbSNP
rs1033969114 1191 dbSNP
rs951723063 1192 dbSNP
rs984984078 1195 dbSNP
rs1319261899 1198 dbSNP
rs1201047253 1207 dbSNP
rs1200504437 1208 dbSNP
rs1321296878 1210 dbSNP
rs1050747905 1211 dbSNP
rs1435523427 1219 dbSNP
rs547992784 1220 dbSNP
rs1276770625 1222 dbSNP
rs908147080 1223 dbSNP
rs565887125 1229 dbSNP
rs976637351 1231 dbSNP
rs947362858 1236 dbSNP
rs1041841229 1238 dbSNP
rs368999326 1253 dbSNP
rs1002921635 1260 dbSNP
rs1057331305 1265 dbSNP
rs183619420 1273 dbSNP
rs1179958395 1275 dbSNP
rs1172673401 1276 dbSNP
rs1394461859 1279 dbSNP
rs1390828059 1280 dbSNP
rs1050505573 1281 dbSNP
rs1342550066 1288 dbSNP
rs1446050474 1290 dbSNP
rs865900243 1296 dbSNP
rs1310146418 1297 dbSNP
rs558019678 1304 dbSNP
rs925232647 1315 dbSNP
rs936676597 1316 dbSNP
rs1221035250 1319 dbSNP
rs1449260941 1321 dbSNP
rs1256640107 1332 dbSNP
rs1296715177 1337 dbSNP
rs1240305430 1342 dbSNP
rs576477255 1347 dbSNP
rs891695986 1352 dbSNP
rs1380525299 1353 dbSNP
rs1194786799 1364 dbSNP
rs1159935404 1370 dbSNP
rs1278713846 1372 dbSNP
rs1443831512 1374 dbSNP
rs1413006812 1378 dbSNP
rs1182333875 1379 dbSNP
rs759019651 1400 dbSNP
rs188792168 1401 dbSNP
rs767190678 1404 dbSNP
rs1215605396 1424 dbSNP
rs1045973493 1433 dbSNP
rs907069799 1436 dbSNP
rs1001657965 1438 dbSNP
rs1195762448 1442 dbSNP
rs1034065684 1450 dbSNP
rs951685866 1451 dbSNP
rs1319965795 1452 dbSNP
rs1014665640 1456 dbSNP
rs961772482 1457 dbSNP
rs1005829918 1460 dbSNP
rs1276775448 1469 dbSNP
rs1461409652 1469 dbSNP
rs975775619 1474 dbSNP
rs1173274644 1477 dbSNP
rs1404414259 1479 dbSNP
rs1433115841 1480 dbSNP
rs144221764 1481 dbSNP
rs1348832061 1482 dbSNP
rs1361575786 1489 dbSNP
rs146053068 1493 dbSNP
rs1293861398 1494 dbSNP
rs1417286104 1498 dbSNP
rs976394267 1503 dbSNP
rs1477999517 1504 dbSNP
rs914467631 1505 dbSNP
rs1196174226 1508 dbSNP
rs1487616454 1511 dbSNP
rs923398542 1518 dbSNP
rs953572471 1521 dbSNP
rs1324034985 1527 dbSNP
rs140100514 1532 dbSNP
rs925373706 1534 dbSNP
rs142338578 1539 dbSNP
rs1052419476 1540 dbSNP
rs1366446953 1558 dbSNP
rs1293671451 1559 dbSNP
rs913943753 1560 dbSNP
rs1398058424 1563 dbSNP
rs1218594235 1564 dbSNP
rs1259392877 1565 dbSNP
rs945946854 1566 dbSNP
rs1466049474 1568 dbSNP
rs1045658096 1572 dbSNP
rs570206716 1583 dbSNP
rs1425572489 1585 dbSNP
rs1173680303 1588 dbSNP
rs1431728977 1590 dbSNP
rs754275239 1598 dbSNP
rs1266860668 1599 dbSNP
rs6094246 1601 dbSNP
rs1191860068 1604 dbSNP
rs1489476790 1610 dbSNP
rs1427898367 1612 dbSNP
rs1236916217 1615 dbSNP
rs1198613471 1617 dbSNP
rs894668405 1617 dbSNP
rs546169847 1622 dbSNP
rs1199424418 1632 dbSNP
rs1048673835 1636 dbSNP
rs1231518002 1638 dbSNP
rs906992106 1649 dbSNP
rs1311250903 1651 dbSNP
rs888692100 1654 dbSNP
rs1379475207 1656 dbSNP
rs1004429409 1667 dbSNP
rs1447500477 1675 dbSNP
rs1173260206 1678 dbSNP
rs1433708365 1679 dbSNP
rs147136280 1685 dbSNP
rs16989622 1685 dbSNP
rs937187967 1689 dbSNP
rs6065915 1692 dbSNP
rs1055581964 1693 dbSNP
rs1377306790 1700 dbSNP
rs1455720153 1701 dbSNP
rs564353976 1701 dbSNP
rs1421744159 1703 dbSNP
rs372113071 1706 dbSNP
rs754664794 1706 dbSNP
rs1014993843 1709 dbSNP
rs6131007 1710 dbSNP
rs752545423 1713 dbSNP
rs539097219 1717 dbSNP
rs1387886794 1718 dbSNP
rs1326066260 1720 dbSNP
rs1483108280 1722 dbSNP
rs1256926107 1723 dbSNP
rs1030024958 1725 dbSNP
rs373208633 1727 dbSNP
rs1006216325 1732 dbSNP
rs1038148432 1736 dbSNP
rs1351036551 1738 dbSNP
rs1307985423 1740 dbSNP
rs953273762 1742 dbSNP
rs895146275 1744 dbSNP
rs1379041582 1752 dbSNP
rs1231364867 1755 dbSNP
rs1128536 1756 dbSNP
rs1402692023 1762 dbSNP
rs953644220 1763 dbSNP
rs535643953 1766 dbSNP
rs1440329141 1774 dbSNP
rs1240717713 1778 dbSNP
rs559499140 1789 dbSNP
rs969049967 1791 dbSNP
rs986287349 1792 dbSNP
rs977310125 1794 dbSNP
rs924622645 1795 dbSNP
rs1213463591 1802 dbSNP
rs1284794474 1810 dbSNP
rs1487107989 1810 dbSNP
rs1485398188 1811 dbSNP
rs1355175006 1817 dbSNP
rs529392936 1818 dbSNP
rs755931668 1818 dbSNP
rs1340975670 1821 dbSNP
rs374927329 1826 dbSNP
rs938643912 1827 dbSNP
rs1397833501 1828 dbSNP
rs1269302736 1832 dbSNP
rs1338725850 1837 dbSNP
rs1297782222 1839 dbSNP
rs1420510091 1840 dbSNP
rs6104446 1845 dbSNP
rs1387299379 1856 dbSNP
rs1467072085 1862 dbSNP
rs547532075 1866 dbSNP
rs915972299 1871 dbSNP
rs140527356 1873 dbSNP
rs1380958811 1879 dbSNP
rs1477018849 1885 dbSNP
rs1049040999 1886 dbSNP
rs1157135943 1887 dbSNP
rs1193985377 1893 dbSNP
rs1448346361 1896 dbSNP
rs1363621050 1898 dbSNP
rs888587491 1900 dbSNP
rs1208718792 1902 dbSNP
rs988259641 1916 dbSNP
rs1165526080 1918 dbSNP
rs1274904171 1930 dbSNP
rs913859364 1949 dbSNP
rs1392991405 1953 dbSNP
rs1339644989 1967 dbSNP
rs1440816317 1972 dbSNP
rs949415952 1976 dbSNP
rs533345728 1982 dbSNP
rs981742137 1984 dbSNP
rs551683521 1986 dbSNP
rs367589157 1987 dbSNP
rs779326395 1990 dbSNP
rs1167684070 1992 dbSNP
rs569996321 1996 dbSNP
rs1007277666 2000 dbSNP
rs750492801 2004 dbSNP
rs1171813598 2006 dbSNP
rs150067894 2011 dbSNP
rs1197562855 2014 dbSNP
rs1451625213 2021 dbSNP
rs879109569 2023 dbSNP
rs1036112175 2028 dbSNP
rs897459293 2030 dbSNP
rs997203060 2031 dbSNP
rs556144569 2033 dbSNP
rs1031577753 2034 dbSNP
rs960061170 2042 dbSNP
rs1030441267 2044 dbSNP
rs992824330 2048 dbSNP
rs7274705 2053 dbSNP
rs558998527 2056 dbSNP
rs984192887 2056 dbSNP
rs1445288914 2057 dbSNP
rs1400204969 2058 dbSNP
rs7266662 2059 dbSNP
rs1032504970 2066 dbSNP
rs1175707989 2068 dbSNP
rs1250014303 2069 dbSNP
rs1171593833 2080 dbSNP
rs940179182 2082 dbSNP
rs1478141469 2086 dbSNP
rs1396426322 2088 dbSNP
rs1424602919 2088 dbSNP
rs1167434577 2093 dbSNP
rs1460105876 2096 dbSNP
rs527535790 2102 dbSNP
rs958201077 2102 dbSNP
rs1297977953 2108 dbSNP
rs1206392797 2112 dbSNP
rs1440441708 2114 dbSNP
rs1218910410 2122 dbSNP
rs1277620419 2122 dbSNP
rs1348851695 2134 dbSNP
rs922855506 2135 dbSNP
rs1305805583 2142 dbSNP
rs1461397909 2144 dbSNP
rs1237963229 2152 dbSNP
rs1376824883 2155 dbSNP
rs988186131 2157 dbSNP
rs374520432 2164 dbSNP
rs934206885 2167 dbSNP
rs1171959274 2177 dbSNP
rs1051877371 2183 dbSNP
rs768889712 2192 dbSNP
rs1021058150 2195 dbSNP
rs1007742250 2199 dbSNP
rs971247633 2208 dbSNP
rs1376829285 2212 dbSNP
rs982116068 2216 dbSNP
rs780131040 2218 dbSNP
rs1295929663 2219 dbSNP
rs758294224 2219 dbSNP
rs1372240525 2222 dbSNP
rs904382019 2223 dbSNP
rs926656438 2235 dbSNP
rs998679084 2240 dbSNP
rs937251686 2254 dbSNP
rs1294951483 2259 dbSNP
rs1031631713 2262 dbSNP
rs1486123451 2268 dbSNP
rs6065916 2269 dbSNP
rs1282662073 2277 dbSNP
rs1214567507 2279 dbSNP
rs1353023314 2281 dbSNP
rs546121428 2283 dbSNP
rs1226038351 2296 dbSNP
rs1232639685 2299 dbSNP
rs6065917 2301 dbSNP
rs1415723942 2314 dbSNP
rs1357000134 2315 dbSNP
rs749124161 2318 dbSNP
rs1295920270 2323 dbSNP
rs1418685917 2323 dbSNP
rs371729546 2323 dbSNP
rs1023400685 2332 dbSNP
rs970065199 2335 dbSNP
rs909008332 2338 dbSNP
rs909960884 2343 dbSNP
rs1476034968 2355 dbSNP
rs941885384 2355 dbSNP
rs1259906968 2356 dbSNP
rs961563706 2356 dbSNP
rs972879380 2357 dbSNP
rs1261459736 2360 dbSNP
rs1036491433 2362 dbSNP
rs919002832 2365 dbSNP
rs933090946 2373 dbSNP
rs1051438788 2374 dbSNP
rs1320460329 2377 dbSNP
rs1289731581 2378 dbSNP
rs1234318533 2388 dbSNP
rs1337460803 2391 dbSNP
rs1276676955 2393 dbSNP
rs1399071507 2394 dbSNP
rs1362217820 2396 dbSNP
rs1483724469 2399 dbSNP
rs1190303324 2400 dbSNP
rs546005469 2404 dbSNP
rs770835786 2406 dbSNP
rs1290120406 2413 dbSNP
rs934260574 2421 dbSNP
rs9074 2422 dbSNP
rs867715211 2425 dbSNP
rs1426480937 2435 dbSNP
rs910230926 2436 dbSNP
rs1427251903 2445 dbSNP
rs576308427 2446 dbSNP
rs943034368 2451 dbSNP
rs1188385735 2454 dbSNP
rs1007781689 2465 dbSNP
rs1487524253 2469 dbSNP
rs1054044023 2475 dbSNP
rs1043230857 2477 dbSNP
rs1214916942 2484 dbSNP
rs893956873 2485 dbSNP
rs756848290 2486 dbSNP
rs2664528 2487 dbSNP
rs1307729922 2490 dbSNP
rs1216997213 2491 dbSNP
rs998564707 2491 dbSNP
rs1366334275 2497 dbSNP
rs1052946941 2505 dbSNP
rs771412988 2506 dbSNP
rs1397945932 2513 dbSNP
rs1413882628 2520 dbSNP
rs1462263283 2526 dbSNP
rs1172859957 2528 dbSNP
rs1373888670 2528 dbSNP
rs1431634967 2530 dbSNP
rs1014606162 2532 dbSNP
rs562121519 2535 dbSNP
rs970833444 2540 dbSNP
rs1236824697 2543 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions MCF7
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in SRR1045082. RNA binding protein: AGO2. Condition:Untreated ...

- Farazi TA; Ten Hoeve JJ; Brown M; et al., 2014, Genome biology.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1
miRNA  3' aguGGUAACGAUUUCACGUUAa 5'
             ::||| || :|||||||| 
Target 5' cuuUUAUU-CU-GAGUGCAAUa 3'
2 - 21
Article - Farazi TA; Ten Hoeve JJ; Brown M; et al.
- Genome biology, 2014
BACKGROUND: Various microRNAs (miRNAs) are up- or downregulated in tumors. However, the repression of cognate miRNA targets responsible for the phenotypic effects of this dysregulation in patients remains largely unexplored. To define miRNA targets and associated pathways, together with their relationship to outcome in breast cancer, we integrated patient-paired miRNA-mRNA expression data with a set of validated miRNA targets and pathway inference. RESULTS: To generate a biochemically-validated set of miRNA-binding sites, we performed argonaute-2 photoactivatable-ribonucleoside-enhanced crosslinking and immunoprecipitation (AGO2-PAR-CLIP) in MCF7 cells. We then defined putative miRNA-target interactions using a computational model, which ranked and selected additional TargetScan-predicted interactions based on features of our AGO2-PAR-CLIP binding-site data. We subselected modeled interactions according to the abundance of their constituent miRNA and mRNA transcripts in tumors, and we took advantage of the variability of miRNA expression within molecular subtypes to detect miRNA repression. Interestingly, our data suggest that miRNA families control subtype-specific pathways; for example, miR-17, miR-19a, miR-25, and miR-200b show high miRNA regulatory activity in the triple-negative, basal-like subtype, whereas miR-22 and miR-24 do so in the HER2 subtype. An independent dataset validated our findings for miR-17 and miR-25, and showed a correlation between the expression levels of miR-182 targets and overall patient survival. Pathway analysis associated miR-17, miR-19a, and miR-200b with leukocyte transendothelial migration. CONCLUSIONS: We combined PAR-CLIP data with patient expression data to predict regulatory miRNAs, revealing potential therapeutic targets and prognostic markers in breast cancer.
LinkOut: [PMID: 24398324]
CLIP-seq Support 1 for dataset SRR1045082
Method / RBP PAR-CLIP / AGO2
Cell line / Condition MCF7 / Untreated
Location of target site ENST00000243964.3 | 3UTR | ACUUUUAUUCUGAGUGCAAUAUUUCAAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 24398324 / SRX388831
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE42095 Differentiated embryonic stem cells -0.66 3.1e-4 -0.534 4.3e-3 23 Click to see details
GSE28260 Renal cortex and medulla -0.685 4.9e-3 -0.611 1.3e-2 13 Click to see details
GSE32688 Pancreatic cancer -0.41 9.9e-3 -0.453 4.6e-3 32 Click to see details
GSE19350 CNS germ cell tumors -0.482 5.6e-2 -0.196 2.7e-1 12 Click to see details
GSE38226 Liver fibrosis -0.254 1.3e-1 -0.213 1.8e-1 21 Click to see details
GSE26953 Aortic valvular endothelial cells -0.142 2.5e-1 -0.210 1.6e-1 24 Click to see details
GSE17306 Multiple myeloma 0.085 2.8e-1 0.517 7.1e-5 49 Click to see details
GSE15076 Monocyte-derived dendritic cells 0.253 3.4e-1 0.200 3.7e-1 5 Click to see details
GSE21687 Ependynoma primary tumors -0.051 3.4e-1 0.004 4.9e-1 64 Click to see details
GSE21849 B cell lymphoma -0.067 3.6e-1 0.414 1.3e-2 29 Click to see details
GSE27834 Pluripotent stem cells -0.076 3.9e-1 -0.132 3.1e-1 16 Click to see details
GSE28544 Breast cancer -0.057 4.0e-1 -0.095 3.3e-1 24 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.049 4.1e-1 0.101 3.2e-1 25 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.05 4.2e-1 -0.122 3.0e-1 20 Click to see details
GSE17498 Multiple myeloma 0.027 4.3e-1 0.020 4.5e-1 40 Click to see details
GSE14794 Lymphoblastoid cells -0.008 4.7e-1 -0.030 3.9e-1 90 Click to see details
GSE14794 Lymphoblastoid cells -0.008 4.7e-1 -0.030 3.9e-1 90 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
255 hsa-miR-367-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT055315 DUSP5 dual specificity phosphatase 5 2 8
MIRT055791 PLEKHA1 pleckstrin homology domain containing A1 2 12
MIRT057114 DDIT4 DNA damage inducible transcript 4 2 4
MIRT059663 GATAD2B GATA zinc finger domain containing 2B 2 2
MIRT059926 ZDHHC5 zinc finger DHHC-type containing 5 2 2
MIRT061610 BTG2 BTG anti-proliferation factor 2 2 6
MIRT066478 HMGA2 high mobility group AT-hook 2 2 2
MIRT069388 ZFYVE21 zinc finger FYVE-type containing 21 2 2
MIRT069972 GEMIN2 gem nuclear organelle associated protein 2 2 2
MIRT074764 CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1 2 2
MIRT076199 GID4 GID complex subunit 4 homolog 2 6
MIRT077512 UBE2Z ubiquitin conjugating enzyme E2 Z 2 4
MIRT077903 TOB1 transducer of ERBB2, 1 2 6
MIRT082250 MED29 mediator complex subunit 29 2 4
MIRT082434 CIC capicua transcriptional repressor 2 6
MIRT082474 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT082778 ZNF264 zinc finger protein 264 2 2
MIRT084533 BCL2L11 BCL2 like 11 2 8
MIRT085309 UBXN4 UBX domain protein 4 2 8
MIRT086365 SSFA2 sperm specific antigen 2 2 8
MIRT087455 NF2 neurofibromin 2 2 2
MIRT088865 FOXN2 forkhead box N2 2 12
MIRT092185 ITPR1 inositol 1,4,5-trisphosphate receptor type 1 2 6
MIRT092326 EDEM1 ER degradation enhancing alpha-mannosidase like protein 1 2 6
MIRT093533 GALNT7 polypeptide N-acetylgalactosaminyltransferase 7 2 6
MIRT096935 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 8
MIRT097026 MAP1B microtubule associated protein 1B 2 4
MIRT099137 MYLIP myosin regulatory light chain interacting protein 2 6
MIRT099905 SOX4 SRY-box 4 2 12
MIRT102289 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 2 10
MIRT102507 KLHDC10 kelch domain containing 10 2 2
MIRT102891 INSIG1 insulin induced gene 1 2 2
MIRT109188 VMA21 VMA21, vacuolar ATPase assembly factor 2 4
MIRT124567 PRRC2B proline rich coiled-coil 2B 2 2
MIRT135568 SPRYD4 SPRY domain containing 4 2 2
MIRT161135 SLC25A36 solute carrier family 25 member 36 2 6
MIRT163995 KIAA1109 KIAA1109 2 4
MIRT164689 RNF4 ring finger protein 4 2 2
MIRT167705 HIVEP1 human immunodeficiency virus type I enhancer binding protein 1 2 8
MIRT178956 USP28 ubiquitin specific peptidase 28 2 2
MIRT185717 ARNTL2 aryl hydrocarbon receptor nuclear translocator like 2 2 2
MIRT186264 TCEB3 elongin A 2 2
MIRT186537 TWF1 twinfilin actin binding protein 1 2 4
MIRT186628 COX20 COX20, cytochrome c oxidase assembly factor 2 8
MIRT189373 TXLNA taxilin alpha 2 4
MIRT197013 EIF1 eukaryotic translation initiation factor 1 2 10
MIRT206437 YIPF4 Yip1 domain family member 4 2 2
MIRT211228 FGF2 fibroblast growth factor 2 2 10
MIRT214529 C5ORF24 chromosome 5 open reading frame 24 2 2
MIRT216034 IL6ST interleukin 6 signal transducer 2 10
MIRT218084 TULP4 tubby like protein 4 2 2
MIRT242418 CCDC113 coiled-coil domain containing 113 2 2
MIRT243162 SOX11 SRY-box 11 2 2
MIRT250943 CDK5R1 cyclin dependent kinase 5 regulatory subunit 1 2 4
MIRT253350 ZNF417 zinc finger protein 417 2 2
MIRT271968 ARF1 ADP ribosylation factor 1 2 2
MIRT273214 ZNF695 zinc finger protein 695 2 4
MIRT296114 SLC12A5 solute carrier family 12 member 5 2 2
MIRT301711 TEF TEF, PAR bZIP transcription factor 2 2
MIRT316477 ARID1B AT-rich interaction domain 1B 2 6
MIRT322174 CLN8 CLN8, transmembrane ER and ERGIC protein 2 4
MIRT341538 CNIH1 cornichon family AMPA receptor auxiliary protein 1 2 6
MIRT356062 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 2 2
MIRT443579 PPIC peptidylprolyl isomerase C 2 2
MIRT448825 FKBP1A FK506 binding protein 1A 2 4
MIRT451494 FOPNL FGFR1OP N-terminal like 2 2
MIRT452694 MDM2 MDM2 proto-oncogene 2 2
MIRT453167 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT454588 SLC33A1 solute carrier family 33 member 1 2 4
MIRT455794 TAF8 TATA-box binding protein associated factor 8 2 4
MIRT456010 CYP2C19 cytochrome P450 family 2 subfamily C member 19 2 2
MIRT456044 KIAA1586 KIAA1586 2 2
MIRT456763 TMEM239 transmembrane protein 239 2 4
MIRT458068 NLRP9 NLR family pyrin domain containing 9 2 2
MIRT459230 MRPS21 mitochondrial ribosomal protein S21 2 2
MIRT459534 MFF mitochondrial fission factor 2 6
MIRT459759 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT460236 TNFRSF13C TNF receptor superfamily member 13C 2 2
MIRT461104 OPA3 OPA3, outer mitochondrial membrane lipid metabolism regulator 2 2
MIRT462924 ZNRF3 zinc and ring finger 3 2 2
MIRT463476 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT463516 ZBTB8B zinc finger and BTB domain containing 8B 2 4
MIRT465503 TOR1B torsin family 1 member B 2 2
MIRT469525 RBFOX2 RNA binding protein, fox-1 homolog 2 2 8
MIRT470079 PTGES2 prostaglandin E synthase 2 2 2
MIRT471581 PARD6B par-6 family cell polarity regulator beta 2 2
MIRT473451 MCOLN2 mucolipin 2 2 8
MIRT475882 H3F3C H3 histone family member 3C 2 10
MIRT475915 H3F3B H3 histone family member 3B 2 8
MIRT476195 GOLGA8A golgin A8 family member A 2 10
MIRT476318 GM2A GM2 ganglioside activator 2 2
MIRT476676 FUT11 fucosyltransferase 11 2 10
MIRT478368 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT479545 CDC5L cell division cycle 5 like 2 2
MIRT481024 BAZ2B bromodomain adjacent to zinc finger domain 2B 2 2
MIRT491009 ATF7IP activating transcription factor 7 interacting protein 2 2
MIRT493168 MKNK2 MAP kinase interacting serine/threonine kinase 2 2 2
MIRT494345 CASKIN1 CASK interacting protein 1 2 2
MIRT499087 ZDHHC21 zinc finger DHHC-type containing 21 2 6
MIRT500029 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501298 RRN3 RRN3 homolog, RNA polymerase I transcription factor 2 4
MIRT503124 BCL11B B-cell CLL/lymphoma 11B 2 8
MIRT503301 GTF2A1 general transcription factor IIA subunit 1 2 6
MIRT504328 ASGR2 asialoglycoprotein receptor 2 2 6
MIRT504471 EID2B EP300 interacting inhibitor of differentiation 2B 2 2
MIRT504655 RPL9 ribosomal protein L9 2 6
MIRT505331 TMF1 TATA element modulatory factor 1 2 8
MIRT505732 SERTAD3 SERTA domain containing 3 2 4
MIRT505827 RSBN1 round spermatid basic protein 1 2 8
MIRT506004 PURG purine rich element binding protein G 2 8
MIRT506308 PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 2 6
MIRT506806 KLHL15 kelch like family member 15 2 6
MIRT507119 GOLGA8B golgin A8 family member B 2 6
MIRT507353 FAM129A family with sequence similarity 129 member A 2 6
MIRT507591 DDX3X DEAD-box helicase 3, X-linked 2 4
MIRT507674 CPEB4 cytoplasmic polyadenylation element binding protein 4 2 4
MIRT507703 CNOT2 CCR4-NOT transcription complex subunit 2 2 8
MIRT508012 BCAT1 branched chain amino acid transaminase 1 2 4
MIRT510439 ZIC5 Zic family member 5 2 6
MIRT510539 XKR7 XK related 7 2 4
MIRT510600 TPPP tubulin polymerization promoting protein 2 6
MIRT511060 NRAS NRAS proto-oncogene, GTPase 2 4
MIRT511855 GOLGA8J golgin A8 family member J 2 6
MIRT511865 GOLGA8I golgin A8 family member I, pseudogene 1 3
MIRT512570 CTDSPL CTD small phosphatase like 2 2
MIRT512708 ZNF134 zinc finger protein 134 2 6
MIRT513177 MOAP1 modulator of apoptosis 1 2 6
MIRT513783 PAWR pro-apoptotic WT1 regulator 2 6
MIRT515099 IRGQ immunity related GTPase Q 2 2
MIRT515481 INCENP inner centromere protein 2 4
MIRT517416 BMP8A bone morphogenetic protein 8a 2 2
MIRT518754 C1orf35 chromosome 1 open reading frame 35 2 2
MIRT519780 ZNF354B zinc finger protein 354B 2 4
MIRT519865 ZFP62 ZFP62 zinc finger protein 2 6
MIRT520510 TRAM2 translocation associated membrane protein 2 2 6
MIRT521068 SLC25A32 solute carrier family 25 member 32 2 6
MIRT526912 ZNF772 zinc finger protein 772 2 6
MIRT527134 GULP1 GULP, engulfment adaptor PTB domain containing 1 2 2
MIRT527867 SLC39A14 solute carrier family 39 member 14 2 2
MIRT528404 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 2 2
MIRT532956 ZNF24 zinc finger protein 24 2 4
MIRT533021 ZFC3H1 zinc finger C3H1-type containing 2 4
MIRT533191 WASL Wiskott-Aldrich syndrome like 2 6
MIRT534191 SLC7A11 solute carrier family 7 member 11 2 2
MIRT534961 PTAR1 protein prenyltransferase alpha subunit repeat containing 1 2 4
MIRT536396 LCOR ligand dependent nuclear receptor corepressor 2 2
MIRT537046 GRAMD4 GRAM domain containing 4 2 2
MIRT537125 GOLGA3 golgin A3 2 4
MIRT537183 GFPT2 glutamine-fructose-6-phosphate transaminase 2 2 4
MIRT537652 ERGIC2 ERGIC and golgi 2 2 4
MIRT538632 CCSER2 coiled-coil serine rich protein 2 2 4
MIRT539231 ANP32E acidic nuclear phosphoprotein 32 family member E 2 6
MIRT540099 NPY4R neuropeptide Y receptor Y4 2 2
MIRT540998 ZNF460 zinc finger protein 460 2 4
MIRT541468 AURKA aurora kinase A 2 2
MIRT542680 SESN3 sestrin 3 2 2
MIRT542757 PRRG4 proline rich and Gla domain 4 2 2
MIRT542863 NUCKS1 nuclear casein kinase and cyclin dependent kinase substrate 1 2 2
MIRT542925 HOXC8 homeobox C8 2 2
MIRT543747 SZRD1 SUZ RNA binding domain containing 1 2 2
MIRT544404 ZSCAN12 zinc finger and SCAN domain containing 12 2 2
MIRT544583 AP5Z1 adaptor related protein complex 5 zeta 1 subunit 2 4
MIRT544662 MED19 mediator complex subunit 19 2 2
MIRT545251 GTF2E1 general transcription factor IIE subunit 1 2 2
MIRT545261 TRIM36 tripartite motif containing 36 2 4
MIRT545744 UHRF1BP1 UHRF1 binding protein 1 2 2
MIRT545999 WDR81 WD repeat domain 81 2 2
MIRT546038 VPS4B vacuolar protein sorting 4 homolog B 2 2
MIRT547170 PDZD8 PDZ domain containing 8 2 2
MIRT547273 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT547729 KIF5B kinesin family member 5B 2 2
MIRT548127 GATA6 GATA binding protein 6 2 2
MIRT548203 FNIP1 folliculin interacting protein 1 2 2
MIRT548756 CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4 2 2
MIRT549641 ZNF75A zinc finger protein 75a 2 2
MIRT549684 ZNF598 zinc finger protein 598 2 2
MIRT550197 MRO maestro 2 2
MIRT550340 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT550536 MYZAP myocardial zonula adherens protein 2 2
MIRT550975 TOR4A torsin family 4 member A 2 2
MIRT551221 CIDEC cell death inducing DFFA like effector c 2 2
MIRT551355 AGBL5 ATP/GTP binding protein like 5 2 2
MIRT551571 LETM1 leucine zipper and EF-hand containing transmembrane protein 1 2 2
MIRT552277 RAB3D RAB3D, member RAS oncogene family 2 2
MIRT552661 ZADH2 zinc binding alcohol dehydrogenase domain containing 2 2 2
MIRT553081 UCK2 uridine-cytidine kinase 2 2 2
MIRT553753 TBC1D8 TBC1 domain family member 8 2 2
MIRT554030 SPCS3 signal peptidase complex subunit 3 2 2
MIRT554099 SMU1 DNA replication regulator and spliceosomal factor 2 2
MIRT554155 SLX4 SLX4 structure-specific endonuclease subunit 2 2
MIRT554815 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT555522 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT555597 PIP5K1C phosphatidylinositol-4-phosphate 5-kinase type 1 gamma 2 2
MIRT555632 PHLPP2 PH domain and leucine rich repeat protein phosphatase 2 2 4
MIRT555679 PGAM4 phosphoglycerate mutase family member 4 2 4
MIRT555827 PAX9 paired box 9 2 2
MIRT555868 PAIP1 poly(A) binding protein interacting protein 1 2 2
MIRT555939 NUP43 nucleoporin 43 2 2
MIRT555994 NFYB nuclear transcription factor Y subunit beta 2 2
MIRT556340 MAP2K4 mitogen-activated protein kinase kinase 4 2 2
MIRT556432 LONRF3 LON peptidase N-terminal domain and ring finger 3 2 2
MIRT556585 LHFPL2 LHFPL tetraspan subfamily member 2 2 4
MIRT556801 KIAA1958 KIAA1958 2 2
MIRT558047 EXOC5 exocyst complex component 5 2 2
MIRT558697 CLTA clathrin light chain A 2 2
MIRT559191 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT559639 AKAP10 A-kinase anchoring protein 10 2 2
MIRT559707 AEN apoptosis enhancing nuclease 2 2
MIRT560673 SRFBP1 serum response factor binding protein 1 2 2
MIRT560990 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT562170 HOXA13 homeobox A13 2 2
MIRT562275 GNAQ G protein subunit alpha q 2 2
MIRT563624 ZNF277 zinc finger protein 277 2 2
MIRT563815 FMN1 formin 1 2 2
MIRT564096 TLR3 toll like receptor 3 2 2
MIRT565320 TMEM41A transmembrane protein 41A 2 2
MIRT565986 RNF44 ring finger protein 44 2 2
MIRT566047 REV3L REV3 like, DNA directed polymerase zeta catalytic subunit 2 2
MIRT568236 C11orf24 chromosome 11 open reading frame 24 2 2
MIRT568310 BAK1 BCL2 antagonist/killer 1 2 2
MIRT572376 ATOX1 antioxidant 1 copper chaperone 2 2
MIRT574822 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 2
MIRT609212 PELP1 proline, glutamate and leucine rich protein 1 2 2
MIRT616217 RBM27 RNA binding motif protein 27 2 2
MIRT629087 FASLG Fas ligand 2 2
MIRT632124 FKBP9 FK506 binding protein 9 2 2
MIRT632576 POLQ DNA polymerase theta 2 2
MIRT634799 ENTHD1 ENTH domain containing 1 2 2
MIRT636553 ESRP1 epithelial splicing regulatory protein 1 2 2
MIRT640977 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT653875 SH2B3 SH2B adaptor protein 3 2 2
MIRT655598 OTUD7B OTU deubiquitinase 7B 2 2
MIRT659764 CCDC171 coiled-coil domain containing 171 2 2
MIRT660744 ALG14 ALG14, UDP-N-acetylglucosaminyltransferase subunit 2 2
MIRT681037 AAED1 AhpC/TSA antioxidant enzyme domain containing 1 2 2
MIRT682305 RBM28 RNA binding motif protein 28 2 2
MIRT682573 EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2 2
MIRT686217 ZNF267 zinc finger protein 267 2 2
MIRT687209 PLXNA3 plexin A3 2 2
MIRT690630 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT692419 AGMAT agmatinase 2 2
MIRT694437 MCF2L2 MCF.2 cell line derived transforming sequence-like 2 2 2
MIRT700725 PNO1 partner of NOB1 homolog 2 2
MIRT701549 NARF nuclear prelamin A recognition factor 2 2
MIRT704379 DAND5 DAN domain BMP antagonist family member 5 2 2
MIRT707935 PPP1R3D protein phosphatase 1 regulatory subunit 3D 2 2
MIRT709939 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT711371 MED7 mediator complex subunit 7 2 2
MIRT712327 PER2 period circadian clock 2 2 2
MIRT714515 SHE Src homology 2 domain containing E 2 2
MIRT715520 G2E3 G2/M-phase specific E3 ubiquitin protein ligase 2 2
MIRT724294 OSMR oncostatin M receptor 2 2
MIRT725358 MUC21 mucin 21, cell surface associated 2 2
MIRT732242 KLF4 Kruppel like factor 4 3 1
MIRT735384 SPAG5 sperm associated antigen 5 3 0
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-367 Medpor NULL NULL Microarray osteoblast-like cells line (MG-63) 18408260 2008 up-regulated
miR-367 Activin A NULL 229455 Quantitative real-time PCR Human embryonic stem (hES) cells 19885849 2010 up-regulated
miR-367 Mistletoe lectin-I NULL NULL Microarray colorectal cancer cells CLY cells 20955366 2011 down-regulated
miR-367 Doxorubicin approved 31703 Quantitative real-time PCR heart 22859947 2012 up-regulated
miR-367 Paclitaxel approved 36314 Microarray Ovarian cancer cell lines 24220856 2014 up-regulated
miR-367 Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-367 Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Siop Treatment Protocol sensitive High Nephroblastoma tissue
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved resistant High Pan-Cancer cell line (NCI-H460, NCI-H522, NCI-H322M, HOP62, A549, EKVX, MALME-3M, NCI-H226, HT-29, HCT-116, SE-620, HCT-15, HCC2998, COLO205, HS-578T, NCI/ADR-RES, OVCAR8, OVCAR4, ACHN, SN-12C, 786-O, CAKI-1, UO-31, TK-10, A498, SK-MEL-28, UACC-257, M14, UACC-62, SK
hsa-miR-367-3p Doxorubicin 31703 NSC123127 approved sensitive High Hepatocellular Carcinoma tissue and cell line (HepG2)
hsa-miR-367-3p Mitoxantrone 4212 NSC279836 approved sensitive High Breast Cancer cell line (MCF-7)
hsa-miR-367-3p Sorafenib 216239 NSC747971 approved sensitive Low Hepatocellular Carcinoma cell line (SKhep1, HA22T)
hsa-miR-367-3p Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM16)
hsa-miR-367-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-367-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-367-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved resistant cell line (IGROV-1)
hsa-miR-367-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)

Error report submission