miRTarBase - #MIRT329263


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pre-miRNA Information
pre-miRNA hsa-mir-511   
Genomic Coordinates chr10: 17845107 - 17845193
Description Homo sapiens miR-511 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-511-3p
Sequence 54| AAUGUGUAGCAAAAGACAGA |73
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30502461 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs548691953 3 dbSNP
rs1322530388 4 dbSNP
rs1313209508 11 dbSNP
rs1223031412 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol AIMP1   
Synonyms EMAP2, EMAPII, HLD3, SCYE1, p43
Description aminoacyl tRNA synthetase complex interacting multifunctional protein 1
Transcript NM_001142415   
Other Transcripts NM_001142416 , NM_004757   
Expression
Putative miRNA Targets on AIMP1
3'UTR of AIMP1
(miRNA target sites are highlighted)		 
>AIMP1|NM_001142415|3'UTR
   1 AATGCTTCCACTACCAAAAGACATTAGAGAAAACCTTAAAAGTAATAAAGAGAAATATATTTGTCACTTATACCTAAAAT
  81 ATGAGTGGCTCATTTTTGCATTACTCTCTTCTAGACTTGACTAGTCATTTACTTGGTATATATTGTTTTCATTGATTGGG
 161 GAAACACTAGATTTTTACCTCGGTTTTTGATCATTTATAATGGAGAGAGGAAGTTGCCTATGTTTTGTAATAATTTATTT
 241 TTTAGCAGGAATATTGATTAGCAGCTTTTTTTTCTTTATACACATAGATAACTAACTAGATTAATGTTTAGTTTCTTATT
 321 TGTAGGCACAGGATGCATGAAATTTCAAGCTCTGGGATTTTTTGTATATTGTGTATCTGTATCAAAAATATCCTCTCCTT
 401 TTCAAAAATGACAGGTTGGAAAATGTTTGTCAGACTTATTAACTGGTCATATTATAATAATACTGATAATGACCAACTGC
 481 TCATTCTGAAAGCCAAACATAAAAGCTAGGAGAAGTGGCATCTGAACATTTTTGCTTTGCTGCCAGAGTAACCCTGACTA
 561 ATAATACAATAACAGCAATTTTTTTAAAAAACTGAGATTTCCTACTGGCTTGAAGTTTTTCTATTTAGCAAAATAATTAG
 641 TAATAAGTTTTGACTAGGTCTAAAGAATGAACACATTGTAAACAGTTGCCACAGTAGTTTCTAATAAATTGATCATAAAA
 721 GCAGCTATCCTTTTTTTTTTTAATTCTAGCTTCTTTTTAAAGATTATTTGGGTACCTAATAAAGGATAATTTATATCTTA
 801 TTACAGACTGATATTTTGCTTTTTCATGTGTCATCATACTGTCAGTATATTAAAAGAAATTACAGCCTAAAACTTAACAT
 881 ATACCATACATATATATTAAGGTGTCAAATAGCTATTCTCACTCATCTTACAAATATTGTAAGAGCAATAAAAATTAATT
 961 GAGGAATTATAAGCCTACAGGTCATCAGCCTTGAGGTGATTACTGATGATTTGGGCTTACACACATGTCAGCAAGATAGG
1041 GAGTGTGGATAGGGGAGGGCTGGTAGCTAACAAGGGGCCTCACAGAGAAATATTAGTGACTTTAACCAGGTTTCAGAATC
1121 TGGGCCTTACCTTTACAGGTTCAACAAAAGAATGGCATCAATAGAGGCAGAAGTATAGACATTGTTTTAAAAATACACAC
1201 ATGCACACACACACAAAACATTTTAGCATTATAGCTGTCTGAATCCTTCAATAAGAAGGAGAGGCACACACAAATACACA
1281 CACTCACACAAAACTCAACAACCATAAAACAACCCTGCATGTTATAAAAGGCAGAATTAAATTTTATTTATTTAAATCCA
1361 TGGAACTCTGGTAGGCCAGGATATATTATAGTACCATTATCAATGTGATATTCTGAAAATATGAACTGAGCGTCATTAAC
1441 AATTGTTGGTACCTAAACACAAAATGAATTTCAAAAGTTACTTTGTTCTCAAGATATGTCATTCTTTTGGGAATAAATAC
1521 TTCTGGTGACAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agACAGAAAACGAUGUGUAa 5'
            | |:| ||  ||||||| 
Target 5' ttTTTTTCTTTATACACATa 3'
 267 - 286 154.00 -8.10
2 
miRNA  3' agACAGAAAACG-AUGUGUaa 5'
            || :||  || ||||||  
Target 5' gaTGATTTGGGCTTACACAca 3'
 1005 - 1025 134.00 -9.40
3 
miRNA  3' agACAGAA-AACGAUGUGUaa 5'
            |||:||     ||||||  
Target 5' atTGTTTTAAAAATACACAca 3'
 1181 - 1201 126.00 -9.10
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30738241 3 COSMIC
COSN6789261 42 COSMIC
COSN26573207 68 COSMIC
COSN7722531 647 COSMIC
COSN14915919 655 COSMIC
COSN20100406 742 COSMIC
COSN27235865 742 COSMIC
rs13534 1179 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs958767549 2 dbSNP
rs774370981 4 dbSNP
rs993233612 6 dbSNP
rs1470969884 8 dbSNP
rs917218122 11 dbSNP
rs1156493459 16 dbSNP
rs746244835 16 dbSNP
rs759412539 17 dbSNP
rs185429433 18 dbSNP
rs1442677905 21 dbSNP
rs1391780371 24 dbSNP
rs1178434290 26 dbSNP
rs113120506 28 dbSNP
rs371096541 29 dbSNP
rs369486213 30 dbSNP
rs1378901694 31 dbSNP
rs1444599435 33 dbSNP
rs762158718 35 dbSNP
rs1350027741 48 dbSNP
rs1407308870 53 dbSNP
rs1021789072 56 dbSNP
rs570985761 57 dbSNP
rs1405941654 71 dbSNP
rs1325459847 90 dbSNP
rs1251344227 92 dbSNP
rs1347980202 100 dbSNP
rs3805410 101 dbSNP
rs923580052 109 dbSNP
rs900417199 122 dbSNP
rs1214283631 124 dbSNP
rs996070126 130 dbSNP
rs992261459 139 dbSNP
rs1235810357 146 dbSNP
rs1368393541 154 dbSNP
rs1300149114 159 dbSNP
rs917654823 162 dbSNP
rs1237464848 168 dbSNP
rs553372007 177 dbSNP
rs189803309 182 dbSNP
rs147386651 183 dbSNP
rs34498392 184 dbSNP
rs139649385 189 dbSNP
rs1376197400 191 dbSNP
rs1010009043 201 dbSNP
rs772983922 204 dbSNP
rs3805411 205 dbSNP
rs1000764625 206 dbSNP
rs897794136 208 dbSNP
rs1185101462 213 dbSNP
rs1034646499 217 dbSNP
rs762261921 219 dbSNP
rs1199404783 220 dbSNP
rs1240069674 224 dbSNP
rs959215286 228 dbSNP
rs1456662695 236 dbSNP
rs542162054 248 dbSNP
rs775324214 250 dbSNP
rs1254834544 254 dbSNP
rs1227717703 257 dbSNP
rs142599031 259 dbSNP
rs1473006168 265 dbSNP
rs1052223129 266 dbSNP
rs889197454 266 dbSNP
rs1007633549 269 dbSNP
rs1411562051 270 dbSNP
rs1400165947 271 dbSNP
rs1460835072 285 dbSNP
rs951357480 287 dbSNP
rs1302280496 289 dbSNP
rs745389326 289 dbSNP
rs1374972760 295 dbSNP
rs1401833799 297 dbSNP
rs1169048187 323 dbSNP
rs1419290882 346 dbSNP
rs1477691066 346 dbSNP
rs1444193643 349 dbSNP
rs904717087 363 dbSNP
rs571577413 374 dbSNP
rs909955189 376 dbSNP
rs1249241365 378 dbSNP
rs1340665259 380 dbSNP
rs1217849407 393 dbSNP
rs1335233766 394 dbSNP
rs1294829267 399 dbSNP
rs941900227 417 dbSNP
rs1339755074 424 dbSNP
rs376349817 429 dbSNP
rs1392014705 430 dbSNP
rs116122330 439 dbSNP
rs931908012 440 dbSNP
rs991833006 445 dbSNP
rs1025094954 450 dbSNP
rs1395686507 455 dbSNP
rs969090467 457 dbSNP
rs1472112017 470 dbSNP
rs1051665951 497 dbSNP
rs758998899 498 dbSNP
rs182065529 513 dbSNP
rs772257138 530 dbSNP
rs980521205 535 dbSNP
rs1260143415 538 dbSNP
rs945681365 555 dbSNP
rs1197631864 570 dbSNP
rs941858294 579 dbSNP
rs972336678 579 dbSNP
rs1211547167 580 dbSNP
rs1355613335 583 dbSNP
rs1261226703 586 dbSNP
rs1041523522 587 dbSNP
rs1337616045 589 dbSNP
rs11544778 593 dbSNP
rs1257160725 593 dbSNP
rs111236636 596 dbSNP
rs767033453 600 dbSNP
rs1403936330 601 dbSNP
rs1390722119 602 dbSNP
rs904270264 606 dbSNP
rs1159652115 607 dbSNP
rs999907781 608 dbSNP
rs1455746484 609 dbSNP
rs1377965268 613 dbSNP
rs549846019 624 dbSNP
rs1254466634 631 dbSNP
rs569938186 639 dbSNP
rs1450813344 640 dbSNP
rs60786555 642 dbSNP
rs1014936539 659 dbSNP
rs1051764713 675 dbSNP
rs1284008255 677 dbSNP
rs555618562 680 dbSNP
rs1239473353 684 dbSNP
rs1348936174 685 dbSNP
rs186440569 686 dbSNP
rs1434847714 688 dbSNP
rs951411654 690 dbSNP
rs982737322 697 dbSNP
rs372503930 707 dbSNP
rs970655146 716 dbSNP
rs1359143400 719 dbSNP
rs11383965 731 dbSNP
rs1391257812 731 dbSNP
rs866644024 731 dbSNP
rs534738307 739 dbSNP
rs1477457181 742 dbSNP
rs398107792 742 dbSNP
rs1425611210 743 dbSNP
rs1487288788 744 dbSNP
rs1463636125 747 dbSNP
rs1166761000 748 dbSNP
rs1402536908 749 dbSNP
rs1397388652 750 dbSNP
rs1332683944 751 dbSNP
rs963128015 754 dbSNP
rs557731523 757 dbSNP
rs1217705097 760 dbSNP
rs1344523797 773 dbSNP
rs1271169969 777 dbSNP
rs921782116 782 dbSNP
rs931816149 785 dbSNP
rs987822750 791 dbSNP
rs1280653329 802 dbSNP
rs1043136397 805 dbSNP
rs1298119514 807 dbSNP
rs190859723 812 dbSNP
rs1316549632 813 dbSNP
rs139596725 815 dbSNP
rs563782041 819 dbSNP
rs1347445711 820 dbSNP
rs1041406381 827 dbSNP
rs1476712818 828 dbSNP
rs904154221 829 dbSNP
rs1032293203 834 dbSNP
rs1486580274 842 dbSNP
rs1276311505 846 dbSNP
rs896059531 852 dbSNP
rs574296342 857 dbSNP
rs1442101223 867 dbSNP
rs34894323 868 dbSNP
rs1194071576 874 dbSNP
rs1200988441 878 dbSNP
rs1014926642 888 dbSNP
rs935761979 895 dbSNP
rs1055524848 900 dbSNP
rs1476790003 903 dbSNP
rs1024609917 905 dbSNP
rs765755992 913 dbSNP
rs969062586 921 dbSNP
rs980490216 925 dbSNP
rs1381918611 927 dbSNP
rs1281960644 938 dbSNP
rs750834816 939 dbSNP
rs894656583 944 dbSNP
rs6828660 946 dbSNP
rs1024545704 947 dbSNP
rs887356233 953 dbSNP
rs1377693933 980 dbSNP
rs1330473093 984 dbSNP
rs1463678840 985 dbSNP
rs780459579 991 dbSNP
rs963148042 1019 dbSNP
rs1004389229 1020 dbSNP
rs1472506298 1025 dbSNP
rs919120636 1025 dbSNP
rs1170462693 1026 dbSNP
rs1180758277 1032 dbSNP
rs766949862 1033 dbSNP
rs1456572064 1045 dbSNP
rs1374401984 1049 dbSNP
rs1420725926 1053 dbSNP
rs933219003 1055 dbSNP
rs987811266 1056 dbSNP
rs910523457 1057 dbSNP
rs1016905004 1063 dbSNP
rs1373438059 1064 dbSNP
rs3109951 1070 dbSNP
rs1043062790 1072 dbSNP
rs1302147863 1078 dbSNP
rs1332889371 1084 dbSNP
rs1326379169 1093 dbSNP
rs564321680 1094 dbSNP
rs1028395661 1098 dbSNP
rs926034963 1112 dbSNP
rs1401158623 1123 dbSNP
rs934772883 1126 dbSNP
rs528221184 1127 dbSNP
rs1217135524 1129 dbSNP
rs1438106257 1131 dbSNP
rs1287858319 1142 dbSNP
rs1237772960 1144 dbSNP
rs1487308365 1145 dbSNP
rs1204467755 1147 dbSNP
rs989943287 1156 dbSNP
rs1267905828 1169 dbSNP
rs1245282240 1176 dbSNP
rs1221499169 1178 dbSNP
rs13534 1179 dbSNP
rs1287582231 1184 dbSNP
rs1237285056 1189 dbSNP
rs1014487630 1200 dbSNP
rs1196078263 1204 dbSNP
rs1303675730 1215 dbSNP
rs1365240099 1220 dbSNP
rs1292680838 1221 dbSNP
rs1044684026 1233 dbSNP
rs906144578 1236 dbSNP
rs1160580164 1237 dbSNP
rs911689998 1238 dbSNP
rs748432118 1241 dbSNP
rs1379987890 1252 dbSNP
rs1439898360 1253 dbSNP
rs769987073 1255 dbSNP
rs1160864144 1256 dbSNP
rs925627736 1258 dbSNP
rs1486503449 1259 dbSNP
rs935659668 1260 dbSNP
rs1265948151 1279 dbSNP
rs1213901168 1281 dbSNP
rs1487674481 1282 dbSNP
rs777914090 1284 dbSNP
rs1055978809 1287 dbSNP
rs915654345 1295 dbSNP
rs963153282 1299 dbSNP
rs11544779 1303 dbSNP
rs1300379433 1310 dbSNP
rs950302476 1314 dbSNP
rs1214915137 1318 dbSNP
rs371865014 1320 dbSNP
rs1296260514 1328 dbSNP
rs1393425790 1333 dbSNP
rs1399247573 1341 dbSNP
rs993662268 1359 dbSNP
rs1385185032 1365 dbSNP
rs887249946 1368 dbSNP
rs954713897 1379 dbSNP
rs556322116 1382 dbSNP
rs1325278629 1384 dbSNP
rs1478346600 1397 dbSNP
rs1377983186 1399 dbSNP
rs1426496598 1399 dbSNP
rs754160092 1401 dbSNP
rs1477751495 1403 dbSNP
rs898519747 1404 dbSNP
rs1311261906 1408 dbSNP
rs1257640566 1410 dbSNP
rs565271232 1413 dbSNP
rs1201641738 1414 dbSNP
rs1482097838 1419 dbSNP
rs114810277 1424 dbSNP
rs964636187 1427 dbSNP
rs1237976346 1429 dbSNP
rs1265995492 1432 dbSNP
rs1489394181 1433 dbSNP
rs1480351017 1434 dbSNP
rs1028866239 1443 dbSNP
rs528901030 1445 dbSNP
rs774205827 1446 dbSNP
rs978722547 1451 dbSNP
rs1018801653 1466 dbSNP
rs1397837226 1467 dbSNP
rs1180105649 1468 dbSNP
rs1378032604 1469 dbSNP
rs925962783 1470 dbSNP
rs1466278759 1472 dbSNP
rs1402934028 1473 dbSNP
rs1418865355 1483 dbSNP
rs1168928909 1487 dbSNP
rs76283285 1491 dbSNP
rs550976895 1494 dbSNP
rs1465597732 1497 dbSNP
rs967179952 1498 dbSNP
rs977358868 1501 dbSNP
rs1421534234 1503 dbSNP
rs917397328 1505 dbSNP
rs925877354 1515 dbSNP
rs957295874 1521 dbSNP
rs1044610250 1524 dbSNP
rs11933821 1540 dbSNP
rs915522264 1542 dbSNP
rs949818171 1547 dbSNP
rs1329568781 1548 dbSNP
rs1045435760 1552 dbSNP
rs1372823916 1574 dbSNP
rs1037338039 1582 dbSNP
rs1329791590 1583 dbSNP
rs1313130158 1599 dbSNP
rs1446487284 1602 dbSNP
rs1392161849 1604 dbSNP
rs908740540 1617 dbSNP
rs569089302 1619 dbSNP
rs535785818 1628 dbSNP
rs1367408647 1635 dbSNP
rs533238262 1636 dbSNP
rs1441211642 1638 dbSNP
rs1318013120 1640 dbSNP
rs1177840941 1641 dbSNP
rs1451964241 1646 dbSNP
rs1269120188 1653 dbSNP
rs898745626 1655 dbSNP
rs1208004848 1660 dbSNP
rs1355501184 1668 dbSNP
rs997469126 1678 dbSNP
rs1049760788 1687 dbSNP
rs1236010934 1688 dbSNP
rs1008682319 1690 dbSNP
rs1017422473 1692 dbSNP
rs1446228616 1695 dbSNP
rs964562776 1707 dbSNP
rs3109950 1713 dbSNP
rs1008334585 1714 dbSNP
rs1298334830 1717 dbSNP
rs1378171441 1723 dbSNP
rs1420976354 1723 dbSNP
rs760209003 1731 dbSNP
rs1196439898 1732 dbSNP
rs1451015013 1737 dbSNP
rs1263797397 1743 dbSNP
rs1217519937 1744 dbSNP
rs565929509 1754 dbSNP
rs1283897508 1765 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 9255.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agACAGAAAACGAUGUGUAa 5'
            | |:| ||  ||||||| 
Target 5' uuUUUUUCUUUAUACACAUa 3'
 		3 - 22
Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000394701.4 | 3UTR | CUUUUUUUUCUUUAUACACAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
239 hsa-miR-511-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT068303 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT072025 SCP2 sterol carrier protein 2 2 2
MIRT073626 IGF1R insulin like growth factor 1 receptor 2 2
MIRT080574 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT094167 PCGF3 polycomb group ring finger 3 2 4
MIRT096536 LIFR LIF receptor alpha 2 2
MIRT156224 SLC25A12 solute carrier family 25 member 12 2 2
MIRT177714 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT184922 ZNF268 zinc finger protein 268 2 2
MIRT185107 LYPLAL1 lysophospholipase like 1 2 2
MIRT193093 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT213346 TADA2B transcriptional adaptor 2B 2 2
MIRT225350 SDCBP syndecan binding protein 2 2
MIRT226972 AKAP2 A-kinase anchoring protein 2 2 6
MIRT226977 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 6
MIRT229844 YIPF6 Yip1 domain family member 6 2 2
MIRT230994 PRRG4 proline rich and Gla domain 4 2 2
MIRT270215 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 4
MIRT277060 NDFIP2 Nedd4 family interacting protein 2 2 4
MIRT278336 CFL2 cofilin 2 2 4
MIRT280390 CALM1 calmodulin 1 2 2
MIRT298042 BACH1 BTB domain and CNC homolog 1 2 2
MIRT302449 CLIP4 CAP-Gly domain containing linker protein family member 4 2 2
MIRT311937 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 4
MIRT329263 AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 2 2
MIRT359186 F2RL1 F2R like trypsin receptor 1 2 6
MIRT363208 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT371124 YTHDC1 YTH domain containing 1 2 2
MIRT386755 TAOK1 TAO kinase 1 2 2
MIRT395122 BAHD1 bromo adjacent homology domain containing 1 2 2
MIRT396089 MKLN1 muskelin 1 2 2
MIRT443566 EVX2 even-skipped homeobox 2 2 2
MIRT447626 CUL3 cullin 3 2 2
MIRT447680 ZNF264 zinc finger protein 264 2 2
MIRT451053 NT5C1B 5'-nucleotidase, cytosolic IB 2 2
MIRT452048 NT5C1B-RDH14 NT5C1B-RDH14 readthrough 2 2
MIRT459890 KIAA1191 KIAA1191 2 4
MIRT464483 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465264 TRIM44 tripartite motif containing 44 2 2
MIRT467570 SLITRK4 SLIT and NTRK like family member 4 2 2
MIRT467800 SLC2A14 solute carrier family 2 member 14 2 2
MIRT469543 RASAL2 RAS protein activator like 2 2 2
MIRT469931 PTPRJ protein tyrosine phosphatase, receptor type J 2 4
MIRT474056 LMNB2 lamin B2 2 2
MIRT474097 LMBR1L limb development membrane protein 1 like 2 2
MIRT475183 INSIG2 insulin induced gene 2 2 6
MIRT484264 FAM177A1 family with sequence similarity 177 member A1 2 2
MIRT487567 LOXL2 lysyl oxidase like 2 2 2
MIRT499080 CBWD1 COBW domain containing 1 2 6
MIRT499126 CBWD5 COBW domain containing 5 2 6
MIRT502093 KPNA5 karyopherin subunit alpha 5 2 8
MIRT503328 SOX5 SRY-box 5 2 6
MIRT503839 NCAM2 neural cell adhesion molecule 2 2 6
MIRT504030 CEP104 centrosomal protein 104 2 4
MIRT504314 LHFPL5 LHFPL tetraspan subfamily member 5 2 8
MIRT504525 BVES blood vessel epicardial substance 2 6
MIRT504680 CYGB cytoglobin 2 4
MIRT504815 DOCK7 dedicator of cytokinesis 7 2 4
MIRT505757 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT506151 PLEKHA3 pleckstrin homology domain containing A3 2 6
MIRT506908 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 6
MIRT508259 CD226 CD226 molecule 2 2
MIRT508307 XRCC3 X-ray repair cross complementing 3 2 4
MIRT508784 CDKL1 cyclin dependent kinase like 1 2 6
MIRT508897 C4orf29 abhydrolase domain containing 18 2 6
MIRT508967 TECRL trans-2,3-enoyl-CoA reductase like 2 4
MIRT508973 MLLT3 MLLT3, super elongation complex subunit 2 6
MIRT509149 TSC22D3 TSC22 domain family member 3 2 4
MIRT509188 TSPAN2 tetraspanin 2 2 4
MIRT509212 BRCC3 BRCA1/BRCA2-containing complex subunit 3 2 4
MIRT509214 SEC23IP SEC23 interacting protein 2 6
MIRT509237 PDE10A phosphodiesterase 10A 2 6
MIRT509248 OTX1 orthodenticle homeobox 1 2 6
MIRT509469 TRIM2 tripartite motif containing 2 2 4
MIRT509754 EFCAB11 EF-hand calcium binding domain 11 2 4
MIRT509805 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT509938 USP25 ubiquitin specific peptidase 25 2 4
MIRT509954 ITGA1 integrin subunit alpha 1 2 6
MIRT509965 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 4
MIRT509988 GTF2H1 general transcription factor IIH subunit 1 2 4
MIRT510036 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 6
MIRT510164 STARD8 StAR related lipid transfer domain containing 8 2 4
MIRT510199 CYP4F11 cytochrome P450 family 4 subfamily F member 11 2 9
MIRT510249 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 6
MIRT510502 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 2 2
MIRT510906 PURA purine rich element binding protein A 2 4
MIRT511051 NRF1 nuclear respiratory factor 1 2 4
MIRT511273 KLHL23 kelch like family member 23 2 4
MIRT511368 IL6ST interleukin 6 signal transducer 2 4
MIRT511521 HMGB2 high mobility group box 2 2 4
MIRT512004 DUSP7 dual specificity phosphatase 7 2 4
MIRT512080 CSRNP3 cysteine and serine rich nuclear protein 3 2 8
MIRT514234 EPOR erythropoietin receptor 2 4
MIRT515327 SLC35E3 solute carrier family 35 member E3 2 4
MIRT515409 WDR72 WD repeat domain 72 2 8
MIRT515973 C9orf156 tRNA methyltransferase O 2 4
MIRT516015 NLGN3 neuroligin 3 2 4
MIRT516271 DBT dihydrolipoamide branched chain transacylase E2 2 10
MIRT516495 GLRX2 glutaredoxin 2 2 4
MIRT517272 ANG angiogenin 2 4
MIRT517511 KCNK12 potassium two pore domain channel subfamily K member 12 2 4
MIRT517555 VENTX VENT homeobox 2 4
MIRT519511 RBM22 RNA binding motif protein 22 2 4
MIRT520350 UBN2 ubinuclein 2 2 2
MIRT520687 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT520960 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT521759 PPIL1 peptidylprolyl isomerase like 1 2 6
MIRT522036 PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 2 4
MIRT522127 NELL2 neural EGFL like 2 2 4
MIRT522624 MAP7D1 MAP7 domain containing 1 2 4
MIRT522761 LDLR low density lipoprotein receptor 2 6
MIRT522924 KAT6A lysine acetyltransferase 6A 2 6
MIRT523391 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 4
MIRT523851 ETV6 ETS variant 6 2 2
MIRT523890 EPHA5 EPH receptor A5 2 4
MIRT523945 E2F8 E2F transcription factor 8 2 4
MIRT524222 DCUN1D3 defective in cullin neddylation 1 domain containing 3 2 2
MIRT524410 CNTNAP5 contactin associated protein like 5 2 4
MIRT524568 CALML4 calmodulin like 4 2 4
MIRT524611 ENTHD1 ENTH domain containing 1 2 2
MIRT524907 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 2 4
MIRT525019 ABHD13 abhydrolase domain containing 13 2 6
MIRT525211 C19orf12 chromosome 19 open reading frame 12 2 2
MIRT528253 BMS1 BMS1, ribosome biogenesis factor 2 2
MIRT528294 ZNF76 zinc finger protein 76 2 2
MIRT531898 INVS inversin 2 4
MIRT535962 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT540823 SSPN sarcospan 2 4
MIRT541836 CDON cell adhesion associated, oncogene regulated 2 4
MIRT541914 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT542156 KIAA2018 upstream transcription factor family member 3 2 6
MIRT542175 SERTM1 serine rich and transmembrane domain containing 1 2 6
MIRT542217 IRS1 insulin receptor substrate 1 2 4
MIRT542225 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 6
MIRT543654 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT544097 EDA2R ectodysplasin A2 receptor 2 2
MIRT544533 SPPL3 signal peptide peptidase like 3 2 2
MIRT544954 TUB tubby bipartite transcription factor 2 4
MIRT545027 PLP1 proteolipid protein 1 2 2
MIRT546524 SERTAD3 SERTA domain containing 3 2 2
MIRT547242 OSBPL9 oxysterol binding protein like 9 2 4
MIRT548198 FNIP1 folliculin interacting protein 1 2 2
MIRT548272 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT549480 ACBD5 acyl-CoA binding domain containing 5 2 2
MIRT549498 ABI2 abl interactor 2 2 2
MIRT550325 SMAD9 SMAD family member 9 2 2
MIRT550563 CYP4V2 cytochrome P450 family 4 subfamily V member 2 2 6
MIRT550642 AR androgen receptor 2 2
MIRT550945 CTSE cathepsin E 2 4
MIRT550961 POT1 protection of telomeres 1 2 2
MIRT551178 ATP7A ATPase copper transporting alpha 2 2
MIRT551416 LRRC31 leucine rich repeat containing 31 2 2
MIRT551507 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 2 2
MIRT551517 MMADHC methylmalonic aciduria and homocystinuria, cblD type 2 2
MIRT551550 TMEM133 transmembrane protein 133 2 2
MIRT551757 TRIM42 tripartite motif containing 42 2 2
MIRT551872 TMEM47 transmembrane protein 47 2 2
MIRT551882 EPHA1 EPH receptor A1 2 2
MIRT551917 IGLON5 IgLON family member 5 2 2
MIRT552377 ZNF562 zinc finger protein 562 2 2
MIRT552543 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT553419 TRAF5 TNF receptor associated factor 5 2 2
MIRT554080 SNX4 sorting nexin 4 2 4
MIRT554588 RRAGC Ras related GTP binding C 2 2
MIRT554887 RCC2 regulator of chromosome condensation 2 2 2
MIRT555568 PLCB1 phospholipase C beta 1 2 2
MIRT555819 PCDH11Y protocadherin 11 Y-linked 2 4
MIRT555969 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT556028 MXD1 MAX dimerization protein 1 2 2
MIRT556206 MBNL2 muscleblind like splicing regulator 2 2 2
MIRT556251 MARCH3 membrane associated ring-CH-type finger 3 2 2
MIRT557265 HMGN3 high mobility group nucleosomal binding domain 3 2 2
MIRT557334 HHIP hedgehog interacting protein 2 2
MIRT557427 GXYLT2 glucoside xylosyltransferase 2 2 4
MIRT557537 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT557797 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT557805 FOXP1 forkhead box P1 2 2
MIRT558569 CRIM1 cysteine rich transmembrane BMP regulator 1 2 2
MIRT558734 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT558878 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT558933 CBX1 chromobox 1 2 2
MIRT559133 BTG3 BTG anti-proliferation factor 3 2 4
MIRT559168 BRWD3 bromodomain and WD repeat domain containing 3 2 4
MIRT559618 AMER1 APC membrane recruitment protein 1 2 2
MIRT561627 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT561971 LRRC59 leucine rich repeat containing 59 2 2
MIRT563049 ZNF138 zinc finger protein 138 2 2
MIRT563432 TRIM13 tripartite motif containing 13 2 4
MIRT563540 RBM41 RNA binding motif protein 41 2 2
MIRT564647 ZNF544 zinc finger protein 544 2 2
MIRT567674 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT567755 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT568267 BICD2 BICD cargo adaptor 2 2 2
MIRT569160 SIGMAR1 sigma non-opioid intracellular receptor 1 2 2
MIRT569179 DMD dystrophin 2 2
MIRT569427 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT569853 RGS5 regulator of G protein signaling 5 2 2
MIRT570554 PLAG1 PLAG1 zinc finger 2 2
MIRT571233 SYT9 synaptotagmin 9 2 2
MIRT572276 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT572539 ZFHX2 zinc finger homeobox 2 2 2
MIRT574271 ZNF350 zinc finger protein 350 2 2
MIRT574428 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT574671 HNRNPDL heterogeneous nuclear ribonucleoprotein D like 2 2
MIRT576699 Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 2
MIRT607889 SATB1 SATB homeobox 1 2 2
MIRT608846 FGF14 fibroblast growth factor 14 2 6
MIRT608854 SPATA6 spermatogenesis associated 6 2 2
MIRT608879 CNTF ciliary neurotrophic factor 2 6
MIRT608899 ZNF860 zinc finger protein 860 2 2
MIRT608948 C12orf60 chromosome 12 open reading frame 60 2 2
MIRT609029 CDH6 cadherin 6 2 2
MIRT609063 LPP LIM domain containing preferred translocation partner in lipoma 2 4
MIRT612277 ZNF280B zinc finger protein 280B 2 2
MIRT612520 SEPT7 septin 7 2 2
MIRT617202 GREM1 gremlin 1, DAN family BMP antagonist 2 2
MIRT618700 KIF13A kinesin family member 13A 2 2
MIRT619141 AFF2 AF4/FMR2 family member 2 2 2
MIRT621071 RAB11FIP3 RAB11 family interacting protein 3 2 6
MIRT627811 PTCHD1 patched domain containing 1 2 4
MIRT641782 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT657645 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT669313 C16orf72 chromosome 16 open reading frame 72 2 2
MIRT674602 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 2
MIRT684064 CPPED1 calcineurin like phosphoesterase domain containing 1 2 2
MIRT685149 TACR3 tachykinin receptor 3 2 2
MIRT693446 PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma 2 2
MIRT693808 WDR3 WD repeat domain 3 2 2
MIRT703845 ETV3 ETS variant 3 2 2
MIRT707100 ZNF850 zinc finger protein 850 2 2
MIRT707375 SVIP small VCP interacting protein 2 2
MIRT707467 ROCK2 Rho associated coiled-coil containing protein kinase 2 2 2
MIRT707514 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT707542 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT707560 CLVS2 clavesin 2 2 2
MIRT708113 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT708217 ADD2 adducin 2 2 2
MIRT710678 MX2 MX dynamin like GTPase 2 2 2
MIRT755898 ZFPM2-AS1 ZFPM2 antisense RNA 1 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-511-3p Doxorubicin 31703 NSC123127 approved resistant High Anaplastic Thyroid Cancer tissue
hsa-miR-511-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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