miRTarBase - #MIRT332934


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pre-miRNA Information
pre-miRNA hsa-mir-3921   
Genomic Coordinates chr3: 99964314 - 99964398
Description Homo sapiens miR-3921 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-3921
Sequence 52| UCUCUGAGUACCAUAUGCCUUGU |74
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN7769671 6 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs758695096 5 dbSNP
rs539077798 6 dbSNP
rs954620527 10 dbSNP
rs1437951547 17 dbSNP
Putative Targets

Gene Information
Gene Symbol PRKAB2   
Synonyms -
Description protein kinase AMP-activated non-catalytic subunit beta 2
Transcript NM_005399   
Expression
Putative miRNA Targets on PRKAB2
3'UTR of PRKAB2
(miRNA target sites are highlighted)		 
>PRKAB2|NM_005399|3'UTR
   1 AGGGATCCCTTCTTGCCTCTAAGGATTCAGGAGAAGCATCTCCCTTGCATTTCTGGACTGAACCAGTCTTACCTGAGACT
  81 GGAAGGCTGATTTGCTTTGAGGCTGATATGTGTGTTTCAGAGCCTCTGAGTAGGATGCTCTGCTTTTGCATTTGATTGCA
 161 GATGAGAGCTTTATGAGTTCACGGAATTTATTTTAAGAAAAAAAAATATACATATGAGAAGAAGGTAAATGGAAGCCTCC
 241 TAGCCCCAGCTAGAAGTATTGTTTCTGCCTGTGGGTTTTCACCAAGACCTGTTTGGGGGCGCTGCAGGAATAACTATATA
 321 GGAAGATTTTTCCTAAAATGAAAGAACAGCAAACTCTTAGGATCCTTGTTGGGTGGAGATTCTATCACTGCTACCTTGGC
 401 TCTCCAAGGAATGGGCTTGTGCTAGACCGCTGCCCTACTTAACAGCTGCCTCATTGCAAGGGCAGTTTTTCTTGCATGGG
 481 TTCTCTATATTCCCAGAGTATGTGGCACAATCTGTGTTGTTTATATGATACCAGATGCCCCACAAGAACCCTTATTCCTC
 561 TCATTTCACATTCTTCCTTTAATAGCCTCCTTCAGATCCCATACCTGACCCCTCTCTAACACAAAACTTATTGGGTAAGT
 641 GACTTTGAAAAGTTTTGTGGCACCTGACCCACCCCAGACACTAGGGCTATCAGAAGGTCTCCTTTTTAGCCCAGCACAGG
 721 CCCAGGCCACTTTGTCGTGTTTGTTTTAACTTCTAAAGAAAATATGTTTCAGCATTATAAGAAAGGCAGAATGCAGAACA
 801 CCTACATTTTTGTTTTAGTTTGGTGCCAAGGCTCAGGCTGTATTGGCAAATTCCCGAAAGTTTTCCCACTTTGCCTGGCC
 881 CTGCTTCTGTCTTTTCTTTCTCAGTAAACAGTTCTGAAGGCAGGAGTGGAACCCGGGAGTATTTTCATGTCTTTCATCCT
 961 TGAAAGATTTTTATGTGCCTGCATTTTTTTTTTAATTAAAAAATGCCTTTTCATTGGTCTTAAGAGACCGCATTGGAGAA
1041 TTTCAGGCTTTTGATAAATGCTTCTTCAAAGAGATTTTCTTCTCTAGTCTAGCCTTCCACATTCTTAGATTAATATGGCC
1121 AACCCTGTACACATCACTACACTAAACACTGCTCTAGATAAACTGCTCAAGTTCATTTAACTCATTTGATGCACCTAAAG
1201 GGGTTCCTCATTTTAAAGATTTGTTAGGCCAAGAAGCAAGAGAGTATTCCTAGTATTCCCAACCATGAAAAGTATCATTC
1281 TTTGCACCAAATGTTAACAAAATCATTTTGTTCTCCTGCCTCTTCTTTTTAAAGGTGTTTGATGATTAAGTGGGGTCACT
1361 GAATTCCATTTGTGGACTGAAAAGTATTCAATCCACTTTTGGGGTTCAGAGATAAAACATTTTTTCCCAAGTAGCTGGGG
1441 CTCTTCCATTTTGCAGATAAGTCAAATAATCAACACTAAAGGAGGCTAAACTGTTGATGAATGAGAGACTCCCTGACTGC
1521 TCAGATGACCCTAGCCACACTGAAAGGGCACCTACAGGTCAGTTTAGCTACCTCCTGTCTTTCCCATGCAAAGCTGATAA
1601 CACAGTTGTCTTTGGACTTGTAGACCTCTTGGATTCCAGGTGTGATGGAGTAAAGTGTGGGATTGTTGTTTTGCTGGGAT
1681 GCAAATAACTAAATGCTTTGGTGGTTAATTGCTAAGAGTAAATACTACTTTAGCCATCCAAGGCCACCTTCTGCAGCAAA
1761 AGGCTTTTGTGGAGAACCTTTTATGTTCCCAACCACTTTTTGAATGGTGTGCCATTTAAAAATCCAGGCCAGATCCTATT
1841 ATAACCAACTCTCAGGATTTACAGCCTTCAGTTGTACTAGAATTTTGTTTTTATCCAATACTCATTAAATAAGTGGGCCA
1921 CTTAGGAAGATTCAAAATCTTGGTTATTACATGAAGTTTGTTATATTTCTTGTCAACAGTATTGAAATGTAATATGTATG
2001 TGTTCATGTATGAAAATTTTTACTCCACACAGGTGTTTCAGTAGAGTGGGGCAGGAAAAGAGATCTCTTCGATTTCTTTC
2081 AGGCCTGAGGCTTTTGTGAAATGCGTCAGCCCCCTGTGACAGTAGGTTTTGATGCTAGTGATCTTCAGATCTTTCTCTCT
2161 GGAAATGTGCAGAGAGTGTCAGTTTCCCAAGTTCTGAGGTAACTCTCAGCCCAGATGTGAAATGGGAGCCTACCAGCTGG
2241 TATAGAAGGGAATGGGTAGGAGGCACTGGGTGCTGACTCATTCAGCACTGTCCCTTTTCTATACTGCTGATACATCCCAT
2321 GGTTCTGAGAAGCCTTATCTCAGTCTATTTGGAAGAGAGGGAGGAAGAGAAGGAAGTAACCCAAAGTACTACTCATTTAT
2401 CATTGTATATTGATTAGTTAAAGGGATAATTAATTTAATGCTGAGGAGAGTTTGACAGATTTTGAAAATGAGTAAAGGCA
2481 AAAAAAATTTTTTTAGCCTTTATTTTGCTTTTGGGAATTTTACAGAGTCAAAGTAGGCAGAATAAGAAAATAGTTCTTCA
2561 GGAGGGCCGACCTTTAAAGAACTTCAACATAGTTTCGGAATTGTGGGGAAGAGAAGAGTGACTGAGCTGAGAAGTAATAA
2641 TAGAATAAAGGGTTGAGTAACTTACAACTGAAAATGATCTCTTTTAAAAAGAAATTAAATCAGACACCACATGGTGGTGT
2721 CCTTGGATCTCACTGTACAGAATTAGCAGTGTATAACCATCTTCTCTTTTCATCTTGTTCCAATTCTCTCCTCTTTCCTT
2801 TCCATTCTGCTTTAAGCTCATGTGTCAGGCAGACTTTACCAGAGTGTCAGACATTACCTAAAACACATACGTTAGCCATG
2881 CTGCTGGTATGGAGAAATTCCACACCATGATTATTAGCCTCCTTTAAGCTGAATGGGATTTAACCATTCTAGGCAACACC
2961 CCTGAAGGGCATACCTAACCTCAATAGTGTTGGCTTTTAAAACGTATGTTTGTATGGTAGAGAAACTTTGTAAAAGAAGA
3041 ATCCAAGAGAAGTTTGTGAGGATCCTACAAACCCAGGCCCACTCACTTTGCTCTAATTCTTTCTAGTATCTTGTAGATCT
3121 AATGGGTCTGGGATAAAAACTTTGAAAAGTGTCAATATTCCATGTATGCTGCTGAAATGAAGTTAAGTTTGGAAAGAAGT
3201 GATACCTCTAGACTGGGTTTATATTAATCTGGGATATAAATGAAGAAGACATACTAATAGAACTCCTTGCTTTTAATTGG
3281 GGAAATAGGGCTTTAATAATTTTGACCTCAACTAAAAATGATATGCAATAGTCTCTGTGTGTGTTTGAAATACATTGTGT
3361 TCTCAGAGATTTCTACATTCTCACGTTCTAGTGATTTGGGGCATGGGCTTAATAGCAGATGTACAGTGTATTCCTGCATT
3441 ATTGTGATTCCCCTTAAAGCCCAGTTCTTGCTGTCTTCTACCAGGGGCTGCTGACTCCAGTTACCCATGGAATGCAGGAC
3521 CTGGGAGGGGTAGCCATTAGGGTCTTTCAAAACTCTTTGGATCTAAGCATTTGTCTCTCCTTAAGTGCCAATCACAATTG
3601 GATATGGAAGGACTGTGATTTCTGCAATGAACCCAAACTTTTAGAGTAAAAAGCCAAATTTAAATTATAAGAAAGAAGGG
3681 AAAAAAGAGAAAAACTCAAGTCTATTACTTGTAGAGTCCAATTCTTAGCAATGGAATCGCTCTAGGATTCTAGTTTGGGC
3761 TTTGTCTGGATTTGCTTTTCTCAGTTGTGCTTTGAAGTGAATAAGCTTTGTTACAAATTAATTTTTTATTAGTTCCAATA
3841 TTAGTTGGAGTTAACTTGAATTGATTGTATGTAGCACAGCACTTTTGCAGTAAGATTGGTGTGAAATACTAAACACTATG
3921 GATTTTGTAGGTGTCAGGTTAAATGGTCAAGGGATACCTACATTAAGTCATATATTAGGTATTGATGATCTTACTTCTTT
4001 TCTGTTCCCCTGTACAAAACACTTACCTAACCCAGCTTGTGGTTTTAGGACAGCCAAAGCTCACTGTTGTTGGTTAGTCC
4081 TAATCACTACACGGGTCTCATAAATGAGACTTGTTTGAATTTTGGTACATTGGAGCATGTTGGTTGGTATTACACGGCAG
4161 CATTTCGAATGAGTGCAGCTCTGTGTCTGTCAGAAAGGAGAGATAAGACTACTTTGAAGGGAATTAAATATGTGAGTCCT
4241 CTTTTTAATGGTGCTTTTTGTAACCTTTAATGCTGAGGTACAGAGCTGCTTTTCAATATTTCATAAAGGAGTGGCAGACA
4321 AGAGTGGATTTTAAAGCTGTTCTTCAAACGTAATTTGTCACTGGACTCTGACACACCTGGAAATTATATGATATGATACA
4401 TACAGAAATGTTGTGGGTTTTTTCCATAAAACTTTAATAAAAGTATTATACAGCAATAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' ugUUCCGUAUAC-CAUGAGUCUCu 5'
            ||  ||| || || ||||||| 
Target 5' gaAATACAT-TGTGTTCTCAGAGa 3'
 3347 - 3369 160.00 -15.80
2 
miRNA  3' ugUUCCG--UAUAC-CAU-GAGUCUCu 5'
            :||||  ||||| ||: :|||||| 
Target 5' ttGAGGCTGATATGTGTGTTTCAGAGc 3'
 97 - 123 155.00 -18.10
3 
miRNA  3' ugUUCCGU--AUACCAUGAGUCUCu 5'
            ||  ||  | ||| ::|||||| 
Target 5' tcAATCCACTTTTGGGGTTCAGAGa 3'
 1388 - 1412 143.00 -14.50
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN16130856 7 COSMIC
COSN13466271 19 COSMIC
COSN30189223 33 COSMIC
COSN27210873 38 COSMIC
COSN30534293 86 COSMIC
COSN31509612 86 COSMIC
COSN31545576 99 COSMIC
COSN30528937 182 COSMIC
COSN31582314 197 COSMIC
COSN8891185 376 COSMIC
COSN15092138 789 COSMIC
COSN29658129 983 COSMIC
COSN5354314 1074 COSMIC
COSN24523049 1251 COSMIC
COSN8891184 1631 COSMIC
COSN20095321 1742 COSMIC
COSN21129789 1790 COSMIC
COSN22117316 2005 COSMIC
COSN8319341 2051 COSMIC
COSN25589787 2094 COSMIC
COSN15959841 2104 COSMIC
COSN21166235 2487 COSMIC
COSN25921273 2597 COSMIC
COSN31778120 3328 COSMIC
COSN1405032 3378 COSMIC
COSN7176107 3604 COSMIC
COSN31488621 3769 COSMIC
COSN26644207 3790 COSMIC
COSN31568534 3834 COSMIC
COSN26537890 3853 COSMIC
COSN4708553 3860 COSMIC
COSN1088790 3883 COSMIC
COSN31543108 3894 COSMIC
COSN28774344 3948 COSMIC
COSN8635942 4113 COSMIC
COSN26555862 4158 COSMIC
COSN31527732 4166 COSMIC
COSN19661198 4222 COSMIC
COSN7176106 4239 COSMIC
COSN30543679 4314 COSMIC
COSN22780418 4409 COSMIC
COSN28688874 4442 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs782632352 7 dbSNP
rs782021530 10 dbSNP
rs1273635074 15 dbSNP
rs1334035299 16 dbSNP
rs782275599 20 dbSNP
rs1253030230 23 dbSNP
rs587626807 25 dbSNP
rs1176756920 28 dbSNP
rs1248668950 29 dbSNP
rs782310271 35 dbSNP
rs782229157 39 dbSNP
rs782648823 40 dbSNP
rs201208258 42 dbSNP
rs1460221740 43 dbSNP
rs375182207 44 dbSNP
rs371441555 48 dbSNP
rs954724333 57 dbSNP
rs1462051027 64 dbSNP
rs1048059 73 dbSNP
rs181336301 81 dbSNP
rs1297163377 85 dbSNP
rs1368296898 90 dbSNP
rs1416289564 91 dbSNP
rs1293565285 103 dbSNP
rs1354534876 105 dbSNP
rs1028977958 109 dbSNP
rs1231243727 110 dbSNP
rs1297630979 112 dbSNP
rs1308063707 126 dbSNP
rs1203880801 137 dbSNP
rs1249730104 138 dbSNP
rs996200323 143 dbSNP
rs1486710874 149 dbSNP
rs1211800726 153 dbSNP
rs587601340 154 dbSNP
rs1032444082 160 dbSNP
rs587722449 167 dbSNP
rs1188731230 168 dbSNP
rs902727606 176 dbSNP
rs1420837784 178 dbSNP
rs1428496533 179 dbSNP
rs1169098847 182 dbSNP
rs880002474 183 dbSNP
rs1436071870 188 dbSNP
rs1313048658 196 dbSNP
rs587659739 205 dbSNP
rs894793717 206 dbSNP
rs1054812431 207 dbSNP
rs1362533173 207 dbSNP
rs1445521126 207 dbSNP
rs1213874804 208 dbSNP
rs1295340613 209 dbSNP
rs772177884 210 dbSNP
rs1235117521 216 dbSNP
rs1279878190 218 dbSNP
rs2304893 228 dbSNP
rs1218364276 231 dbSNP
rs1243099072 242 dbSNP
rs1485764495 244 dbSNP
rs1185239195 248 dbSNP
rs1397446324 253 dbSNP
rs1455144268 262 dbSNP
rs1173781872 275 dbSNP
rs188433387 278 dbSNP
rs1412442216 282 dbSNP
rs1160878164 289 dbSNP
rs1345512231 294 dbSNP
rs972938652 316 dbSNP
rs1318379331 321 dbSNP
rs939867351 322 dbSNP
rs138108363 333 dbSNP
rs1343102458 338 dbSNP
rs587729662 341 dbSNP
rs1225643713 347 dbSNP
rs986722186 353 dbSNP
rs1316643296 359 dbSNP
rs1214096952 364 dbSNP
rs1255426333 365 dbSNP
rs954123106 369 dbSNP
rs768913771 380 dbSNP
rs782686438 383 dbSNP
rs958081450 384 dbSNP
rs587668933 401 dbSNP
rs587769927 402 dbSNP
rs966896976 404 dbSNP
rs1399888603 406 dbSNP
rs769655031 415 dbSNP
rs185241670 419 dbSNP
rs1461935856 428 dbSNP
rs1013812054 429 dbSNP
rs1325179055 439 dbSNP
rs1329367813 450 dbSNP
rs1444478918 452 dbSNP
rs895412200 455 dbSNP
rs587614778 464 dbSNP
rs1226917369 471 dbSNP
rs35184246 471 dbSNP
rs995172507 473 dbSNP
rs898202238 476 dbSNP
rs587767414 487 dbSNP
rs1288360690 492 dbSNP
rs782443087 507 dbSNP
rs1183438830 508 dbSNP
rs182001426 514 dbSNP
rs1469356073 516 dbSNP
rs1179716898 527 dbSNP
rs912378179 528 dbSNP
rs587634164 529 dbSNP
rs1051389420 533 dbSNP
rs1388498239 538 dbSNP
rs1411727349 540 dbSNP
rs189347102 550 dbSNP
rs1295371759 552 dbSNP
rs1356430830 554 dbSNP
rs782600834 562 dbSNP
rs1282936671 584 dbSNP
rs1342152691 586 dbSNP
rs1197013982 590 dbSNP
rs1273149983 595 dbSNP
rs1482462855 598 dbSNP
rs921188291 602 dbSNP
rs587675678 603 dbSNP
rs782095855 604 dbSNP
rs868963123 612 dbSNP
rs1475375151 621 dbSNP
rs1187043209 627 dbSNP
rs1366634311 630 dbSNP
rs974677159 630 dbSNP
rs1476373249 631 dbSNP
rs1168454811 633 dbSNP
rs1418831265 634 dbSNP
rs75047837 641 dbSNP
rs587747052 649 dbSNP
rs1376362100 655 dbSNP
rs1414535602 657 dbSNP
rs978189562 663 dbSNP
rs587672572 668 dbSNP
rs150348765 672 dbSNP
rs1228747497 678 dbSNP
rs1270157078 680 dbSNP
rs1340771354 684 dbSNP
rs1225551997 687 dbSNP
rs1282018211 697 dbSNP
rs1485828918 697 dbSNP
rs1253770582 701 dbSNP
rs1448542624 705 dbSNP
rs587719032 710 dbSNP
rs959570445 712 dbSNP
rs1447724935 713 dbSNP
rs1175664924 714 dbSNP
rs1395894458 715 dbSNP
rs1033928730 721 dbSNP
rs1171072421 726 dbSNP
rs1387540042 727 dbSNP
rs1383143733 733 dbSNP
rs1318169874 737 dbSNP
rs1363730589 744 dbSNP
rs1432249858 755 dbSNP
rs781852755 762 dbSNP
rs1305056451 766 dbSNP
rs1348011985 768 dbSNP
rs1232012711 795 dbSNP
rs995792478 804 dbSNP
rs1253895545 806 dbSNP
rs1352491247 812 dbSNP
rs898149668 818 dbSNP
rs1037127261 823 dbSNP
rs1247324762 836 dbSNP
rs1463524706 843 dbSNP
rs141362213 847 dbSNP
rs147689657 852 dbSNP
rs1432698810 855 dbSNP
rs587725625 856 dbSNP
rs1365763962 862 dbSNP
rs751071807 870 dbSNP
rs921137584 873 dbSNP
rs1158968890 880 dbSNP
rs1387065977 902 dbSNP
rs1054295248 912 dbSNP
rs1463436210 915 dbSNP
rs1327187858 919 dbSNP
rs587669055 934 dbSNP
rs1298728284 935 dbSNP
rs1385738969 935 dbSNP
rs587771117 936 dbSNP
rs1239470408 937 dbSNP
rs1326856918 939 dbSNP
rs1215436747 951 dbSNP
rs1273756472 955 dbSNP
rs1208208398 960 dbSNP
rs145465008 971 dbSNP
rs1419951662 993 dbSNP
rs143623614 994 dbSNP
rs1476398145 994 dbSNP
rs1166197663 1011 dbSNP
rs978508814 1013 dbSNP
rs1456953161 1014 dbSNP
rs1291333019 1017 dbSNP
rs1391567869 1019 dbSNP
rs879958599 1021 dbSNP
rs587644563 1029 dbSNP
rs1234914198 1030 dbSNP
rs917994557 1032 dbSNP
rs1321110043 1033 dbSNP
rs992281511 1038 dbSNP
rs782693827 1051 dbSNP
rs1481011968 1059 dbSNP
rs1204628642 1064 dbSNP
rs1249894033 1068 dbSNP
rs1486855147 1073 dbSNP
rs1189162290 1075 dbSNP
rs1413671149 1087 dbSNP
rs77965534 1096 dbSNP
rs587690532 1097 dbSNP
rs1374248727 1098 dbSNP
rs1429847275 1101 dbSNP
rs1306958259 1112 dbSNP
rs1368388471 1115 dbSNP
rs758148633 1116 dbSNP
rs1303265901 1119 dbSNP
rs1378311605 1124 dbSNP
rs1226498538 1126 dbSNP
rs587645606 1129 dbSNP
rs1297651291 1132 dbSNP
rs1308080753 1137 dbSNP
rs1227845787 1139 dbSNP
rs79992453 1163 dbSNP
rs587700148 1165 dbSNP
rs1350385654 1168 dbSNP
rs1212003842 1171 dbSNP
rs1015232042 1175 dbSNP
rs1482492752 1180 dbSNP
rs879946953 1183 dbSNP
rs377242023 1186 dbSNP
rs1263052935 1192 dbSNP
rs587622145 1201 dbSNP
rs1167479251 1206 dbSNP
rs10900321 1228 dbSNP
rs1436247318 1230 dbSNP
rs1029824131 1240 dbSNP
rs1358299864 1249 dbSNP
rs1445545234 1263 dbSNP
rs996588543 1274 dbSNP
rs1365908534 1275 dbSNP
rs1434435099 1288 dbSNP
rs1295547211 1291 dbSNP
rs1373325970 1302 dbSNP
rs1235233070 1318 dbSNP
rs1278206210 1325 dbSNP
rs1310743482 1329 dbSNP
rs1218466507 1333 dbSNP
rs782023431 1341 dbSNP
rs77014204 1347 dbSNP
rs1245629255 1352 dbSNP
rs1191344697 1355 dbSNP
rs935890221 1362 dbSNP
rs903105183 1364 dbSNP
rs1161077151 1368 dbSNP
rs781928449 1370 dbSNP
rs1456601903 1372 dbSNP
rs587617673 1374 dbSNP
rs1318484787 1391 dbSNP
rs868951314 1394 dbSNP
rs1373209320 1404 dbSNP
rs1437289640 1405 dbSNP
rs917957799 1409 dbSNP
rs766861379 1413 dbSNP
rs992230741 1416 dbSNP
rs1225810014 1418 dbSNP
rs1289420213 1426 dbSNP
rs587738183 1429 dbSNP
rs1207335857 1439 dbSNP
rs1275601021 1445 dbSNP
rs79417474 1453 dbSNP
rs1476859863 1455 dbSNP
rs1178607169 1457 dbSNP
rs974252708 1461 dbSNP
rs1472148708 1463 dbSNP
rs962960373 1469 dbSNP
rs782347483 1471 dbSNP
rs983095222 1475 dbSNP
rs1406014675 1477 dbSNP
rs955208668 1489 dbSNP
rs1323032131 1492 dbSNP
rs1029316243 1499 dbSNP
rs1348332156 1504 dbSNP
rs1444591535 1509 dbSNP
rs1308893498 1510 dbSNP
rs1350195192 1522 dbSNP
rs996536125 1528 dbSNP
rs1227012431 1535 dbSNP
rs1295632888 1539 dbSNP
rs1357729376 1551 dbSNP
rs1228358741 1555 dbSNP
rs1288477547 1570 dbSNP
rs899612289 1572 dbSNP
rs1206783619 1586 dbSNP
rs1252092936 1589 dbSNP
rs782233703 1593 dbSNP
rs1179823081 1600 dbSNP
rs1419914659 1601 dbSNP
rs1473108540 1608 dbSNP
rs1162626354 1626 dbSNP
rs1411662249 1638 dbSNP
rs999987309 1640 dbSNP
rs903053929 1642 dbSNP
rs782681925 1659 dbSNP
rs1370249261 1662 dbSNP
rs72997505 1681 dbSNP
rs1341477580 1684 dbSNP
rs114820152 1727 dbSNP
rs782625951 1730 dbSNP
rs896459825 1732 dbSNP
rs1230063295 1738 dbSNP
rs200836004 1742 dbSNP
rs17159893 1743 dbSNP
rs3214715 1744 dbSNP
rs376100517 1744 dbSNP
rs1056496729 1747 dbSNP
rs1257966987 1751 dbSNP
rs1442815556 1760 dbSNP
rs587692788 1762 dbSNP
rs782527563 1769 dbSNP
rs1235670798 1776 dbSNP
rs938048740 1777 dbSNP
rs1476423077 1795 dbSNP
rs587619458 1804 dbSNP
rs1169357230 1811 dbSNP
rs974198893 1814 dbSNP
rs782271584 1815 dbSNP
rs1389744646 1823 dbSNP
rs1428016420 1830 dbSNP
rs1175781358 1836 dbSNP
rs1403284252 1839 dbSNP
rs587725103 1849 dbSNP
rs1332765105 1853 dbSNP
rs116479604 1856 dbSNP
rs1436619684 1861 dbSNP
rs908744598 1862 dbSNP
rs983427515 1864 dbSNP
rs1363869797 1866 dbSNP
rs1225673181 1870 dbSNP
rs1257412559 1874 dbSNP
rs955673681 1887 dbSNP
rs879974508 1891 dbSNP
rs1199734589 1894 dbSNP
rs1276387180 1901 dbSNP
rs1466227741 1904 dbSNP
rs1189173567 1912 dbSNP
rs1247439770 1927 dbSNP
rs975064477 1948 dbSNP
rs1447746493 1950 dbSNP
rs963723375 1956 dbSNP
rs1378493846 1957 dbSNP
rs1032719584 1964 dbSNP
rs999981283 1977 dbSNP
rs1387739414 1978 dbSNP
rs1458194094 1987 dbSNP
rs1320504683 2008 dbSNP
rs1387208952 2009 dbSNP
rs1432273037 2010 dbSNP
rs1302954671 2021 dbSNP
rs967602448 2033 dbSNP
rs1331375687 2039 dbSNP
rs1232214701 2044 dbSNP
rs1272812173 2048 dbSNP
rs1020138975 2051 dbSNP
rs1330972933 2056 dbSNP
rs767946216 2062 dbSNP
rs1014563842 2063 dbSNP
rs782431511 2070 dbSNP
rs1267431924 2071 dbSNP
rs587609105 2078 dbSNP
rs1056445789 2084 dbSNP
rs1432863476 2094 dbSNP
rs1197065057 2095 dbSNP
rs1473133347 2105 dbSNP
rs1410486887 2110 dbSNP
rs1450983092 2120 dbSNP
rs1002207930 2121 dbSNP
rs1294812398 2126 dbSNP
rs1390861849 2131 dbSNP
rs1385824577 2135 dbSNP
rs1321190895 2137 dbSNP
rs1352029075 2139 dbSNP
rs1228847417 2140 dbSNP
rs1287634198 2150 dbSNP
rs1327057286 2164 dbSNP
rs1247048148 2175 dbSNP
rs1266067853 2177 dbSNP
rs1488210841 2178 dbSNP
rs1208231061 2180 dbSNP
rs1483585683 2182 dbSNP
rs1181987086 2188 dbSNP
rs1410354055 2194 dbSNP
rs905234780 2201 dbSNP
rs587705506 2205 dbSNP
rs1166133263 2222 dbSNP
rs587655051 2224 dbSNP
rs1368478303 2263 dbSNP
rs1456972691 2270 dbSNP
rs1161277881 2275 dbSNP
rs1372082855 2279 dbSNP
rs587759670 2280 dbSNP
rs1307227742 2283 dbSNP
rs1348437556 2288 dbSNP
rs1397662557 2295 dbSNP
rs941484982 2304 dbSNP
rs1313363162 2307 dbSNP
rs908686515 2313 dbSNP
rs1242791641 2327 dbSNP
rs1047246793 2328 dbSNP
rs1343204621 2330 dbSNP
rs934211100 2333 dbSNP
rs1250001678 2335 dbSNP
rs1484448407 2336 dbSNP
rs1182883304 2337 dbSNP
rs922857198 2347 dbSNP
rs368502647 2348 dbSNP
rs1181268483 2349 dbSNP
rs1391599231 2355 dbSNP
rs1429948748 2361 dbSNP
rs1167601475 2363 dbSNP
rs1352488709 2367 dbSNP
rs963672061 2379 dbSNP
rs925648501 2386 dbSNP
rs978899710 2388 dbSNP
rs1378426147 2392 dbSNP
rs1450519873 2393 dbSNP
rs1299862877 2394 dbSNP
rs1837984 2402 dbSNP
rs1227870963 2406 dbSNP
rs1272755366 2407 dbSNP
rs1314301916 2412 dbSNP
rs144768087 2421 dbSNP
rs1255899548 2444 dbSNP
rs1482585374 2458 dbSNP
rs1020508099 2459 dbSNP
rs1249292437 2469 dbSNP
rs1449560227 2476 dbSNP
rs185330075 2479 dbSNP
rs1434676823 2488 dbSNP
rs587696615 2488 dbSNP
rs1176590864 2495 dbSNP
rs1358477636 2495 dbSNP
rs1468119211 2496 dbSNP
rs377739595 2498 dbSNP
rs1389380869 2502 dbSNP
rs1837983 2509 dbSNP
rs782479183 2519 dbSNP
rs1268622834 2524 dbSNP
rs782249572 2526 dbSNP
rs587676660 2533 dbSNP
rs587647708 2534 dbSNP
rs1220146041 2537 dbSNP
rs1300971731 2540 dbSNP
rs1310832271 2553 dbSNP
rs782792559 2558 dbSNP
rs1269328732 2568 dbSNP
rs1464955231 2569 dbSNP
rs192813992 2577 dbSNP
rs190240698 2592 dbSNP
rs1038397948 2595 dbSNP
rs587619507 2596 dbSNP
rs887215192 2597 dbSNP
rs1047642091 2599 dbSNP
rs1191431879 2607 dbSNP
rs1479335100 2608 dbSNP
rs1161273334 2634 dbSNP
rs1412689536 2640 dbSNP
rs141516642 2641 dbSNP
rs1316362481 2660 dbSNP
rs1351718698 2661 dbSNP
rs11584787 2665 dbSNP
rs1293174847 2665 dbSNP
rs1230697562 2677 dbSNP
rs1289513230 2686 dbSNP
rs1329133226 2691 dbSNP
rs1039917811 2695 dbSNP
rs1222680396 2701 dbSNP
rs587604110 2702 dbSNP
rs1281479836 2703 dbSNP
rs184947895 2703 dbSNP
rs587710767 2711 dbSNP
rs587655289 2712 dbSNP
rs1184135884 2715 dbSNP
rs1252408966 2729 dbSNP
rs978464499 2735 dbSNP
rs1442760 2737 dbSNP
rs912984065 2761 dbSNP
rs587708347 2764 dbSNP
rs1156765492 2766 dbSNP
rs17159890 2770 dbSNP
rs959853658 2782 dbSNP
rs1406033641 2789 dbSNP
rs587753345 2794 dbSNP
rs1364012827 2802 dbSNP
rs587709872 2806 dbSNP
rs979998581 2809 dbSNP
rs587636317 2812 dbSNP
rs151249205 2819 dbSNP
rs79930184 2821 dbSNP
rs1286469018 2824 dbSNP
rs1357841782 2829 dbSNP
rs1228449569 2846 dbSNP
rs1290552890 2854 dbSNP
rs1356875208 2862 dbSNP
rs1206890328 2868 dbSNP
rs782412543 2868 dbSNP
rs1025717192 2870 dbSNP
rs1179488164 2871 dbSNP
rs879981218 2878 dbSNP
rs1473160171 2887 dbSNP
rs1181410950 2889 dbSNP
rs1383588510 2894 dbSNP
rs781154849 2906 dbSNP
rs1431823502 2908 dbSNP
rs782171593 2914 dbSNP
rs901329770 2916 dbSNP
rs1408633609 2925 dbSNP
rs1341640342 2962 dbSNP
rs770822313 2964 dbSNP
rs782570595 2965 dbSNP
rs587653857 2966 dbSNP
rs1448082947 2974 dbSNP
rs1379970361 2984 dbSNP
rs1230084325 2991 dbSNP
rs868994376 2995 dbSNP
rs746481485 3002 dbSNP
rs113458837 3003 dbSNP
rs942925158 3004 dbSNP
rs1202997380 3011 dbSNP
rs904780624 3016 dbSNP
rs1043075791 3017 dbSNP
rs945730609 3021 dbSNP
rs1451409758 3025 dbSNP
rs758064994 3039 dbSNP
rs373706402 3047 dbSNP
rs1389842813 3049 dbSNP
rs1474617353 3052 dbSNP
rs1174717130 3056 dbSNP
rs1403394922 3072 dbSNP
rs1414351338 3075 dbSNP
rs1335333394 3081 dbSNP
rs992579482 3090 dbSNP
rs938436305 3091 dbSNP
rs1436731035 3092 dbSNP
rs927090193 3098 dbSNP
rs979946589 3103 dbSNP
rs1325542302 3114 dbSNP
rs1224931525 3122 dbSNP
rs1276355299 3130 dbSNP
rs1345484860 3133 dbSNP
rs1222766245 3145 dbSNP
rs963259625 3146 dbSNP
rs1466295571 3160 dbSNP
rs1016187786 3164 dbSNP
rs983806111 3171 dbSNP
rs951397589 3183 dbSNP
rs1261257672 3199 dbSNP
rs1445453243 3202 dbSNP
rs142437160 3208 dbSNP
rs998200428 3217 dbSNP
rs1378514404 3239 dbSNP
rs901277426 3243 dbSNP
rs1174898756 3249 dbSNP
rs1414912734 3251 dbSNP
rs1458339947 3259 dbSNP
rs1018363711 3263 dbSNP
rs782222026 3284 dbSNP
rs587743628 3286 dbSNP
rs1043307309 3289 dbSNP
rs186753674 3290 dbSNP
rs148795308 3291 dbSNP
rs946320994 3296 dbSNP
rs891442670 3298 dbSNP
rs782658454 3314 dbSNP
rs1331188737 3317 dbSNP
rs1228960735 3321 dbSNP
rs587736169 3328 dbSNP
rs1348646957 3335 dbSNP
rs147762073 3339 dbSNP
rs1490285144 3339 dbSNP
rs59421868 3339 dbSNP
rs1197777627 3341 dbSNP
rs1254556967 3345 dbSNP
rs15722 3348 dbSNP
rs868925486 3354 dbSNP
rs1473183957 3357 dbSNP
rs1159051122 3359 dbSNP
rs1362657798 3360 dbSNP
rs1451005248 3362 dbSNP
rs1164620930 3364 dbSNP
rs1391059594 3375 dbSNP
rs782542978 3377 dbSNP
rs1301017584 3381 dbSNP
rs1044214045 3384 dbSNP
rs587663116 3385 dbSNP
rs1306208695 3391 dbSNP
rs1334052066 3396 dbSNP
rs183530042 3401 dbSNP
rs1266240096 3419 dbSNP
rs781906424 3421 dbSNP
rs587710106 3423 dbSNP
rs1220579839 3427 dbSNP
rs1277156389 3432 dbSNP
rs77042864 3443 dbSNP
rs59398783 3451 dbSNP
rs983368121 3456 dbSNP
rs1249101953 3462 dbSNP
rs1416764406 3475 dbSNP
rs587593687 3480 dbSNP
rs1385345120 3481 dbSNP
rs1423551690 3487 dbSNP
rs918566491 3494 dbSNP
rs587716743 3495 dbSNP
rs1372104573 3497 dbSNP
rs1462364947 3504 dbSNP
rs1297526017 3506 dbSNP
rs587631026 3520 dbSNP
rs1397829995 3536 dbSNP
rs587768488 3541 dbSNP
rs1382158115 3544 dbSNP
rs1018311484 3550 dbSNP
rs1300105035 3553 dbSNP
rs1343319722 3556 dbSNP
rs1204321005 3557 dbSNP
rs1006963128 3559 dbSNP
rs968901722 3570 dbSNP
rs1022235041 3571 dbSNP
rs1484500693 3573 dbSNP
rs587733826 3579 dbSNP
rs1201551344 3580 dbSNP
rs1010465541 3591 dbSNP
rs1443497081 3607 dbSNP
rs1181357433 3608 dbSNP
rs892057359 3610 dbSNP
rs1428862282 3617 dbSNP
rs587678359 3617 dbSNP
rs376908972 3653 dbSNP
rs1169541307 3655 dbSNP
rs1352566391 3657 dbSNP
rs61704329 3668 dbSNP
rs1405364281 3673 dbSNP
rs1450610092 3678 dbSNP
rs1322777676 3686 dbSNP
rs1362982974 3687 dbSNP
rs1214231752 3688 dbSNP
rs1293835684 3696 dbSNP
rs1314315299 3701 dbSNP
rs1234534604 3705 dbSNP
rs145434795 3712 dbSNP
rs587619838 3738 dbSNP
rs1047140 3739 dbSNP
rs1249478746 3742 dbSNP
rs1485961754 3756 dbSNP
rs587688363 3757 dbSNP
rs370694870 3761 dbSNP
rs781988927 3768 dbSNP
rs1417041042 3783 dbSNP
rs781825893 3788 dbSNP
rs782446125 3789 dbSNP
rs1434697668 3814 dbSNP
rs1177049796 3822 dbSNP
rs1428590149 3823 dbSNP
rs144381374 3829 dbSNP
rs1161406022 3833 dbSNP
rs1345896943 3835 dbSNP
rs192570927 3836 dbSNP
rs1287351060 3838 dbSNP
rs868952884 3842 dbSNP
rs188612102 3846 dbSNP
rs1283170558 3865 dbSNP
rs1406008842 3865 dbSNP
rs1322096452 3869 dbSNP
rs1230795588 3885 dbSNP
rs929204036 3886 dbSNP
rs587663386 3898 dbSNP
rs1316989360 3914 dbSNP
rs923193519 3915 dbSNP
rs1240057002 3920 dbSNP
rs976010017 3928 dbSNP
rs1489335363 3938 dbSNP
rs1199949122 3954 dbSNP
rs1267951645 3963 dbSNP
rs200761345 3970 dbSNP
rs1479394770 3972 dbSNP
rs1184270435 3978 dbSNP
rs879958718 3986 dbSNP
rs911251932 3987 dbSNP
rs1400254909 3992 dbSNP
rs1157191240 3994 dbSNP
rs1425664052 3997 dbSNP
rs1302871960 4004 dbSNP
rs985492859 4008 dbSNP
rs1344057339 4022 dbSNP
rs587630440 4026 dbSNP
rs1280657909 4027 dbSNP
rs1373409270 4034 dbSNP
rs77195331 4035 dbSNP
rs1281655613 4036 dbSNP
rs1361097604 4041 dbSNP
rs1222816850 4057 dbSNP
rs1290680357 4073 dbSNP
rs1489803131 4073 dbSNP
rs751574451 4087 dbSNP
rs1233456159 4090 dbSNP
rs782118461 4092 dbSNP
rs1175606225 4093 dbSNP
rs587671463 4101 dbSNP
rs956280294 4104 dbSNP
rs1445422308 4131 dbSNP
rs1163177074 4142 dbSNP
rs1035943873 4153 dbSNP
rs587596066 4155 dbSNP
rs183690552 4156 dbSNP
rs191772120 4157 dbSNP
rs1354504910 4160 dbSNP
rs905506502 4178 dbSNP
rs1277229399 4187 dbSNP
rs1044101272 4203 dbSNP
rs139708756 4204 dbSNP
rs781869817 4205 dbSNP
rs1314000470 4206 dbSNP
rs1357003543 4211 dbSNP
rs6937 4222 dbSNP
rs587673096 4223 dbSNP
rs1437111152 4229 dbSNP
rs782150518 4230 dbSNP
rs1244972050 4232 dbSNP
rs1461836224 4241 dbSNP
rs587617059 4242 dbSNP
rs1183208945 4247 dbSNP
rs1383685878 4248 dbSNP
rs188612634 4254 dbSNP
rs1168900867 4261 dbSNP
rs781947523 4296 dbSNP
rs985878739 4303 dbSNP
rs1336737807 4308 dbSNP
rs1407643076 4322 dbSNP
rs782614638 4326 dbSNP
rs914645601 4327 dbSNP
rs1380186077 4335 dbSNP
rs988952919 4337 dbSNP
rs587637372 4338 dbSNP
rs146203424 4341 dbSNP
rs1338510009 4346 dbSNP
rs1212673604 4347 dbSNP
rs1264989841 4349 dbSNP
rs1035881718 4350 dbSNP
rs1203153021 4357 dbSNP
rs587689181 4360 dbSNP
rs1448921611 4363 dbSNP
rs1194178192 4385 dbSNP
rs782164074 4386 dbSNP
rs1241836054 4390 dbSNP
rs183127461 4396 dbSNP
rs879982422 4399 dbSNP
rs1430665377 4404 dbSNP
rs1469847555 4413 dbSNP
rs1175026480 4415 dbSNP
rs1403305377 4433 dbSNP
rs1383490849 4434 dbSNP
rs1318579668 4443 dbSNP
rs1006302074 4448 dbSNP
rs781934446 4449 dbSNP
rs587762106 4452 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Disease 5565.0
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM714645. RNA binding protein: AGO2. Condition:completeT1 ...

- Kishore S; Jaskiewicz L; Burger L; Hausser et al., 2011, Nature methods.

Article - Kishore S; Jaskiewicz L; Burger L; Hausser et al.
- Nature methods, 2011
Cross-linking and immunoprecipitation (CLIP) is increasingly used to map transcriptome-wide binding sites of RNA-binding proteins. We developed a method for CLIP data analysis, and applied it to compare CLIP with photoactivatable ribonucleoside-enhanced CLIP (PAR-CLIP) and to uncover how differences in cross-linking and ribonuclease digestion affect the identified sites. We found only small differences in accuracies of these methods in identifying binding sites of HuR, which binds low-complexity sequences, and Argonaute 2, which has a complex binding specificity. We found that cross-link-induced mutations led to single-nucleotide resolution for both PAR-CLIP and CLIP. Our results confirm the expectation from original CLIP publications that RNA-binding proteins do not protect their binding sites sufficiently under the denaturing conditions used during the CLIP procedure, and we show that extensive digestion with sequence-specific RNases strongly biases the recovered binding sites. This bias can be substantially reduced by milder nuclease digestion conditions.
LinkOut: [PMID: 21572407]
CLIP-seq Support 1 for dataset GSM714645
Method / RBP PAR-CLIP / AGO2
Cell line / Condition HEK293 / completeT1, repB
Location of target site ENST00000254101.3 | 3UTR | GAGAUUUCUACAUUCUCACGUUC
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 21572407 / GSE28865
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
77 hsa-miR-3921 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT118184 ZNF544 zinc finger protein 544 2 2
MIRT332934 PRKAB2 protein kinase AMP-activated non-catalytic subunit beta 2 2 2
MIRT442165 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT442388 CLVS2 clavesin 2 2 2
MIRT442594 SIX1 SIX homeobox 1 2 2
MIRT448015 HLA-DOA major histocompatibility complex, class II, DO alpha 2 2
MIRT448062 MMP15 matrix metallopeptidase 15 2 2
MIRT489018 C1QTNF6 C1q and TNF related 6 2 2
MIRT494457 BTG2 BTG anti-proliferation factor 2 2 2
MIRT495651 SLC35B2 solute carrier family 35 member B2 2 2
MIRT504018 ACSL6 acyl-CoA synthetase long chain family member 6 2 2
MIRT506778 KLHL15 kelch like family member 15 2 4
MIRT507230 FOXN2 forkhead box N2 2 4
MIRT512551 MFN2 mitofusin 2 2 6
MIRT512843 A1CF APOBEC1 complementation factor 2 6
MIRT513943 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT516104 GADL1 glutamate decarboxylase like 1 2 4
MIRT519832 ZFP69B ZFP69 zinc finger protein B 2 4
MIRT523209 HIST1H3E histone cluster 1 H3 family member e 2 2
MIRT525007 ACTN4 actinin alpha 4 2 6
MIRT528859 PKP1 plakophilin 1 2 2
MIRT529061 ZNF675 zinc finger protein 675 2 2
MIRT531720 TARS threonyl-tRNA synthetase 2 2
MIRT534038 STK4 serine/threonine kinase 4 2 2
MIRT543849 APIP APAF1 interacting protein 2 2
MIRT545865 ZNF264 zinc finger protein 264 2 4
MIRT556038 MXD1 MAX dimerization protein 1 2 2
MIRT561346 ZBTB18 zinc finger and BTB domain containing 18 2 2
MIRT562706 ZNF415 zinc finger protein 415 2 2
MIRT563224 ZNF286A zinc finger protein 286A 2 2
MIRT563861 ZNF616 zinc finger protein 616 2 4
MIRT563880 PAGR1 PAXIP1 associated glutamate rich protein 1 2 2
MIRT564653 ZNF487P zinc finger protein 487 1 1
MIRT566596 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT570879 ZFP1 ZFP1 zinc finger protein 2 2
MIRT573069 TRIB1 tribbles pseudokinase 1 2 2
MIRT573940 ZNF708 zinc finger protein 708 2 2
MIRT575967 Slfn5 schlafen 5 2 5
MIRT607294 CD300E CD300e molecule 2 4
MIRT608188 ERBB2 erb-b2 receptor tyrosine kinase 2 2 2
MIRT609538 ADPRH ADP-ribosylarginine hydrolase 2 2
MIRT610153 PRMT8 protein arginine methyltransferase 8 2 4
MIRT611572 SLFN5 schlafen family member 5 2 7
MIRT613336 AGO2 argonaute 2, RISC catalytic component 2 4
MIRT616561 ZNF512B zinc finger protein 512B 2 2
MIRT617239 SPATS2 spermatogenesis associated serine rich 2 2 2
MIRT618012 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT618479 IL17REL interleukin 17 receptor E like 2 2
MIRT619100 IFI44L interferon induced protein 44 like 2 2
MIRT622266 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT623081 NME6 NME/NM23 nucleoside diphosphate kinase 6 2 2
MIRT625622 LILRB2 leukocyte immunoglobulin like receptor B2 2 2
MIRT627845 PLEKHA6 pleckstrin homology domain containing A6 2 2
MIRT630460 GMPS guanine monophosphate synthase 2 2
MIRT630525 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 4
MIRT631503 TAF8 TATA-box binding protein associated factor 8 2 2
MIRT634538 MRPS17 mitochondrial ribosomal protein S17 2 2
MIRT638808 DCTN3 dynactin subunit 3 2 2
MIRT641304 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT648348 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT649706 ZNF175 zinc finger protein 175 2 2
MIRT652555 TLX1 T-cell leukemia homeobox 1 2 2
MIRT655563 P2RX7 purinergic receptor P2X 7 2 2
MIRT659066 DEPTOR DEP domain containing MTOR interacting protein 2 2
MIRT660342 BCAT1 branched chain amino acid transaminase 1 2 2
MIRT664331 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT688935 ATXN7L3B ataxin 7 like 3B 2 2
MIRT689972 ZNF185 zinc finger protein 185 with LIM domain 2 2
MIRT699515 SKIL SKI like proto-oncogene 2 2
MIRT699976 RREB1 ras responsive element binding protein 1 2 2
MIRT702675 IRS2 insulin receptor substrate 2 2 2
MIRT709358 ULK2 unc-51 like autophagy activating kinase 2 2 2
MIRT709838 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT718717 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT718880 PDIA3 protein disulfide isomerase family A member 3 2 2
MIRT724106 TMEM199 transmembrane protein 199 2 2
MIRT724764 PSG4 pregnancy specific beta-1-glycoprotein 4 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-3921 Fulvestrant 17756771 NSC719276 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-3921 Cisplatin 5460033 NSC119875 approved resistant High Gastric Cancer cell line (SGC7901)
hsa-miR-3921 Osimertinib 71496458 NSC779217 approved resistant cell line (HCC827)
hsa-miR-3921 Paclitaxel 36314 NSC125973 approved resistant cell line (BAS)
hsa-miR-3921 Doxorubicin 31703 NSC123127 approved resistant cell line (BAS)
hsa-miR-3921 Tamoxifen+Fulvestrant sensitive cell line (LCC9)
hsa-miR-3921 Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-3921 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-3921 Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide/Methotrexate/Gemcitabine resistant cell line (Bats-72)

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