miRTarBase - #MIRT338890


—
pre-miRNA Information
pre-miRNA hsa-mir-302b   
Genomic Coordinates chr4: 112648485 - 112648557
Description Homo sapiens miR-302b stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-302b-5p
Sequence 11| ACUUUAACAUGGAAGUGCUUUC |32
Evidence Experimental
Experiments Cloned
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN8489942 10 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs771747691 1 dbSNP
rs1413992790 2 dbSNP
rs1287454726 3 dbSNP
rs1407802102 5 dbSNP
rs556661625 8 dbSNP
rs114318553 9 dbSNP
rs183105707 12 dbSNP
rs759066554 13 dbSNP
rs1338196516 15 dbSNP
Putative Targets

Gene Information
Gene Symbol LLPH   
Synonyms C12orf31, hLLP
Description LLP homolog, long-term synaptic facilitation
Transcript NM_032338   
Expression
Putative miRNA Targets on LLPH
3'UTR of LLPH
(miRNA target sites are highlighted)		 
>LLPH|NM_032338|3'UTR
   1 ACTCTTAAAACCTTGGAAAATGCCACATGGGATAGATGACGGATTAGAATGTATACACATGTATACTTTGATTTCAACTG
  81 CCACCAAATGAAAACCATTTGTTTTCCTATTTTAACTTGGCCTTTTTTCTTCAATTCAAACCCAGCATAACTCCTCAAGT
 161 TTGTTTTGGGAACTTGAATAAAATATTTTCTTTGATACATCCAAGCTCTACTGATACTTTAACTGGATGCTACCCAATAT
 241 CCAGTTATAATCAGGCCTCAACGTTCTGTCAGGTATTAATATGGTTAGAATTGTTCTTACAACTGGTAATTATAGTCAAT
 321 AGAGATAAAACAGATGATGTACTGACAAATTTTTGTGAACTTAGATTTTAAAGAAAGTTGTTGTATAATCATATCATTTA
 401 AAAATACTACATTAGGGCTGGGCATGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCACG
 481 AGGTCAGTTCGAGACTAGCCTGGCTAATACAGTGAAACCCCATCTCTACTAAAAATACAAAATTAGCCGGGCATGGGGGC
 561 GCGCACCTGTAGTTCCAGCTACTCGGGAGGCTGAGGCAGGATAATTGCTTGAACCCAGGAGATGGAGGTTGCAGTGAGCC
 641 AAGATTGCCCCACTGCACTCCACCCTGGGCAATGGAGTAGGACTCTGTCTCAAAAAAAAAAAAAATAATGGATCTTATAA
 721 AGTACTTGTGTGGAGCTTTGATTCCACAGAATAAAAGATATTTTGTGTGTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cuuuCGUGAAGGUACAAUUUCa 5'
              | ||||  || |||||| 
Target 5' ttgtGAACTTAGATTTTAAAGa 3'
 353 - 374 134.00 -6.00
2 
miRNA  3' cuUUCGUGAAGGUA-CAAUUUca 5'
            |:|:|:|  :|| ||||:|  
Target 5' tcAGGTATTAATATGGTTAGAat 3'
 269 - 291 124.00 -7.10
3 
miRNA  3' cuUUCGUG--AAGGUACAAUUUCa 5'
            :| |||    :|| ||| :|| 
Target 5' tgGATCACGAGGTCA-GTTCGAGa 3'
 472 - 494 97.00 -6.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31574469 5 COSMIC
COSN1150983 16 COSMIC
COSN30465685 24 COSMIC
COSN13413170 40 COSMIC
COSN30506007 133 COSMIC
COSN31516056 190 COSMIC
COSN31599026 190 COSMIC
COSN31599905 197 COSMIC
COSN20317773 245 COSMIC
COSN26516717 268 COSMIC
COSN23569708 317 COSMIC
COSN32137809 390 COSMIC
COSN216880 609 COSMIC
COSN24924268 641 COSMIC
COSN20311873 705 COSMIC
COSN25186553 753 COSMIC
COSN29965693 767 COSMIC
COSN27738780 776 COSMIC
COSN1581300 982 COSMIC
COSN21090779 1434 COSMIC
COSN17711283 1674 COSMIC
COSN5950117 2128 COSMIC
COSN25987684 2170 COSMIC
COSN9754040 3052 COSMIC
COSN5950116 3632 COSMIC
COSN26378550 3654 COSMIC
COSN20314047 4009 COSMIC
COSN22456576 4147 COSMIC
COSN1581299 4925 COSMIC
COSN9084120 4944 COSMIC
COSN29457596 5459 COSMIC
COSN29133196 5476 COSMIC
COSN23992566 5585 COSMIC
COSN26277204 5754 COSMIC
COSN5950115 5929 COSMIC
COSN7378077 6095 COSMIC
COSN23443000 6939 COSMIC
rs113866309 672 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1238768573 3 dbSNP
rs373853440 11 dbSNP
rs748038311 11 dbSNP
rs966513113 16 dbSNP
rs753779731 17 dbSNP
rs1309024315 24 dbSNP
rs1054375611 25 dbSNP
rs763562496 30 dbSNP
rs760184150 31 dbSNP
rs775036898 32 dbSNP
rs767139886 36 dbSNP
rs202174097 40 dbSNP
rs373956083 41 dbSNP
rs370487416 42 dbSNP
rs748700018 43 dbSNP
rs776221760 44 dbSNP
rs942805427 47 dbSNP
rs375032855 49 dbSNP
rs768645337 50 dbSNP
rs747039957 51 dbSNP
rs556770296 53 dbSNP
rs540418864 56 dbSNP
rs1396497299 59 dbSNP
rs1216163142 61 dbSNP
rs1340866144 67 dbSNP
rs778913036 77 dbSNP
rs549086999 84 dbSNP
rs930558063 89 dbSNP
rs919211307 90 dbSNP
rs757059298 108 dbSNP
rs1291821375 133 dbSNP
rs1460998122 134 dbSNP
rs1214844237 139 dbSNP
rs940041867 145 dbSNP
rs564349919 147 dbSNP
rs917973273 150 dbSNP
rs974344634 180 dbSNP
rs1262584888 184 dbSNP
rs992268899 185 dbSNP
rs544485368 186 dbSNP
rs962921615 199 dbSNP
rs11544759 204 dbSNP
rs1430732560 208 dbSNP
rs1424769377 211 dbSNP
rs1001179172 217 dbSNP
rs906979851 220 dbSNP
rs1361925314 224 dbSNP
rs1455296107 237 dbSNP
rs555429265 243 dbSNP
rs181303252 244 dbSNP
rs768361307 261 dbSNP
rs573250062 262 dbSNP
rs553100633 263 dbSNP
rs539623850 268 dbSNP
rs1306769949 270 dbSNP
rs570746723 272 dbSNP
rs1318410638 273 dbSNP
rs141287101 274 dbSNP
rs1485419941 275 dbSNP
rs1009623186 279 dbSNP
rs537316350 281 dbSNP
rs965753042 283 dbSNP
rs1176362069 284 dbSNP
rs1248209249 293 dbSNP
rs1420772162 293 dbSNP
rs1347342647 296 dbSNP
rs1019052687 300 dbSNP
rs1301863905 304 dbSNP
rs1375629317 315 dbSNP
rs568736935 320 dbSNP
rs1441092597 325 dbSNP
rs1039691762 331 dbSNP
rs145589839 337 dbSNP
rs796636799 338 dbSNP
rs994638662 341 dbSNP
rs1232129277 355 dbSNP
rs1347796111 355 dbSNP
rs1282590989 357 dbSNP
rs763799845 366 dbSNP
rs1404815611 369 dbSNP
rs1176199703 376 dbSNP
rs1051188795 379 dbSNP
rs1204137393 380 dbSNP
rs1468521664 383 dbSNP
rs930172511 383 dbSNP
rs897709519 385 dbSNP
rs1481525280 395 dbSNP
rs1036258252 396 dbSNP
rs939990309 401 dbSNP
rs1452532382 407 dbSNP
rs1194940078 409 dbSNP
rs1379933470 417 dbSNP
rs918771163 419 dbSNP
rs1409009398 421 dbSNP
rs1167955451 422 dbSNP
rs1355934335 424 dbSNP
rs974198963 440 dbSNP
rs1177388915 442 dbSNP
rs1418650462 448 dbSNP
rs1332501059 451 dbSNP
rs529109417 463 dbSNP
rs1248496789 464 dbSNP
rs528924084 466 dbSNP
rs1458405609 469 dbSNP
rs1242704731 470 dbSNP
rs1201584927 475 dbSNP
rs1325376711 479 dbSNP
rs566440108 480 dbSNP
rs370029931 485 dbSNP
rs938108124 487 dbSNP
rs1256585013 490 dbSNP
rs546745721 491 dbSNP
rs926701493 493 dbSNP
rs1253068256 494 dbSNP
rs1314996979 498 dbSNP
rs1308523530 510 dbSNP
rs979555619 511 dbSNP
rs1421154846 517 dbSNP
rs1428771121 518 dbSNP
rs1171804652 523 dbSNP
rs1394257393 525 dbSNP
rs752226142 528 dbSNP
rs1381615040 536 dbSNP
rs1334261537 538 dbSNP
rs1350986927 541 dbSNP
rs1430021886 547 dbSNP
rs533144212 548 dbSNP
rs1404798057 549 dbSNP
rs1219526205 556 dbSNP
rs749057272 560 dbSNP
rs564247494 561 dbSNP
rs955940650 562 dbSNP
rs11834285 563 dbSNP
rs185051445 564 dbSNP
rs560341762 573 dbSNP
rs1485972395 574 dbSNP
rs774656693 577 dbSNP
rs1018607746 580 dbSNP
rs1038911818 581 dbSNP
rs986232972 584 dbSNP
rs149716740 585 dbSNP
rs541856902 591 dbSNP
rs1006887657 611 dbSNP
rs573219746 614 dbSNP
rs140807993 616 dbSNP
rs1347111028 621 dbSNP
rs766887614 623 dbSNP
rs1400826814 645 dbSNP
rs1312442924 647 dbSNP
rs1353804261 657 dbSNP
rs930079600 658 dbSNP
rs994608985 661 dbSNP
rs1017710613 662 dbSNP
rs113866309 672 dbSNP
rs1038563339 673 dbSNP
rs1222044163 678 dbSNP
rs1015201288 685 dbSNP
rs1247703640 690 dbSNP
rs1340645633 691 dbSNP
rs941490885 695 dbSNP
rs1254870729 696 dbSNP
rs545856784 697 dbSNP
rs200562149 700 dbSNP
rs1238459080 703 dbSNP
rs199763168 703 dbSNP
rs1157401817 704 dbSNP
rs1383494882 705 dbSNP
rs201588599 705 dbSNP
rs56711130 706 dbSNP
rs938011969 706 dbSNP
rs972022461 706 dbSNP
rs1335018922 707 dbSNP
rs201204558 707 dbSNP
rs201078272 708 dbSNP
rs67387970 709 dbSNP
rs1281154148 710 dbSNP
rs143234456 710 dbSNP
rs916922185 712 dbSNP
rs1200747617 718 dbSNP
rs1279772536 722 dbSNP
rs756119540 725 dbSNP
rs763259127 726 dbSNP
rs1365020893 728 dbSNP
rs1235065481 729 dbSNP
rs557083072 744 dbSNP
rs1440874436 747 dbSNP
rs1043846252 757 dbSNP
rs1473899961 763 dbSNP
rs1436810393 765 dbSNP
rs946812182 767 dbSNP
rs537657469 769 dbSNP
rs1407934632 773 dbSNP
rs1330669309 776 dbSNP
rs1369229346 777 dbSNP
rs1377484766 778 dbSNP
rs1192232812 781 dbSNP
rs1440137277 781 dbSNP
rs1426496090 782 dbSNP
rs1419953019 785 dbSNP
rs555289474 785 dbSNP
rs752457216 786 dbSNP
rs1233363765 788 dbSNP
rs1265299024 793 dbSNP
rs1217244125 794 dbSNP
rs1269159591 796 dbSNP
rs1337078933 796 dbSNP
rs1490060980 796 dbSNP
rs1288979574 797 dbSNP
rs1000010516 800 dbSNP
rs1356656456 802 dbSNP
rs964514354 805 dbSNP
rs1017511693 814 dbSNP
rs1251201728 820 dbSNP
rs1434920450 821 dbSNP
rs773602035 828 dbSNP
rs1008780392 830 dbSNP
rs535082048 835 dbSNP
rs1474560913 837 dbSNP
rs747145330 845 dbSNP
rs994547421 852 dbSNP
rs2576188 860 dbSNP
rs1396607109 872 dbSNP
rs527302702 888 dbSNP
rs1038460088 889 dbSNP
rs941543280 897 dbSNP
rs546642126 900 dbSNP
rs1401156845 913 dbSNP
rs1229206016 922 dbSNP
rs7974649 928 dbSNP
rs961793741 929 dbSNP
rs950345279 930 dbSNP
rs1194783715 953 dbSNP
rs1233072465 957 dbSNP
rs35343573 957 dbSNP
rs917458991 958 dbSNP
rs1210455141 985 dbSNP
rs1261186287 985 dbSNP
rs988522298 986 dbSNP
rs934304358 990 dbSNP
rs925745938 992 dbSNP
rs1391787371 998 dbSNP
rs1162568563 1002 dbSNP
rs752895991 1005 dbSNP
rs1002176683 1006 dbSNP
rs1287752809 1006 dbSNP
rs1382228433 1011 dbSNP
rs1383546541 1021 dbSNP
rs964397979 1021 dbSNP
rs1043768941 1037 dbSNP
rs35023084 1048 dbSNP
rs397706967 1048 dbSNP
rs77264018 1048 dbSNP
rs1460325395 1056 dbSNP
rs1260211545 1057 dbSNP
rs768688008 1060 dbSNP
rs1348562371 1064 dbSNP
rs1010991128 1070 dbSNP
rs1264124763 1072 dbSNP
rs1485482078 1073 dbSNP
rs1017394428 1076 dbSNP
rs892577431 1078 dbSNP
rs1052579644 1082 dbSNP
rs944874331 1084 dbSNP
rs987686976 1088 dbSNP
rs1425498870 1090 dbSNP
rs190211472 1098 dbSNP
rs1480075125 1101 dbSNP
rs1266621605 1104 dbSNP
rs117428076 1107 dbSNP
rs994218232 1112 dbSNP
rs1432530026 1114 dbSNP
rs1271924634 1116 dbSNP
rs778663415 1123 dbSNP
rs920243376 1124 dbSNP
rs145281001 1133 dbSNP
rs1005641872 1135 dbSNP
rs200530541 1136 dbSNP
rs1334544965 1141 dbSNP
rs1242351026 1149 dbSNP
rs1319482785 1161 dbSNP
rs35447479 1170 dbSNP
rs561815772 1171 dbSNP
rs749056454 1181 dbSNP
rs548501159 1185 dbSNP
rs1053779085 1204 dbSNP
rs1257528366 1220 dbSNP
rs1281895630 1221 dbSNP
rs961762697 1223 dbSNP
rs1176413894 1237 dbSNP
rs1248276952 1249 dbSNP
rs1441489849 1260 dbSNP
rs755307491 1261 dbSNP
rs79523016 1262 dbSNP
rs992650824 1270 dbSNP
rs1331741378 1272 dbSNP
rs1328509706 1282 dbSNP
rs73123489 1286 dbSNP
rs1034215094 1295 dbSNP
rs546971050 1302 dbSNP
rs545794752 1315 dbSNP
rs1297992018 1326 dbSNP
rs576883991 1326 dbSNP
rs114392861 1332 dbSNP
rs987351817 1337 dbSNP
rs1469060920 1346 dbSNP
rs1232201489 1351 dbSNP
rs139471215 1359 dbSNP
rs766938298 1360 dbSNP
rs752356784 1361 dbSNP
rs1203497067 1363 dbSNP
rs796650111 1364 dbSNP
rs1459007443 1367 dbSNP
rs575005201 1375 dbSNP
rs963251434 1377 dbSNP
rs1178978277 1381 dbSNP
rs1458831661 1382 dbSNP
rs147347759 1386 dbSNP
rs1005527215 1388 dbSNP
rs1427611463 1390 dbSNP
rs970158618 1403 dbSNP
rs1323249487 1405 dbSNP
rs1422015564 1420 dbSNP
rs1277191405 1431 dbSNP
rs369611806 1441 dbSNP
rs920880624 1445 dbSNP
rs1332564385 1448 dbSNP
rs1037296121 1452 dbSNP
rs535289774 1453 dbSNP
rs761154280 1461 dbSNP
rs1368544120 1464 dbSNP
rs1214243517 1471 dbSNP
rs1293167739 1472 dbSNP
rs144332341 1482 dbSNP
rs542668073 1484 dbSNP
rs1272434139 1485 dbSNP
rs552964915 1486 dbSNP
rs1223104856 1508 dbSNP
rs112305738 1512 dbSNP
rs1332274977 1521 dbSNP
rs148636491 1552 dbSNP
rs1184469466 1553 dbSNP
rs772754069 1555 dbSNP
rs1335866051 1564 dbSNP
rs927117120 1582 dbSNP
rs1414986976 1586 dbSNP
rs1417710508 1586 dbSNP
rs74579767 1602 dbSNP
rs796484443 1605 dbSNP
rs1021553979 1606 dbSNP
rs1380580641 1648 dbSNP
rs1296516194 1654 dbSNP
rs1342613671 1655 dbSNP
rs1182582724 1660 dbSNP
rs754389525 1662 dbSNP
rs1354134415 1669 dbSNP
rs1042719336 1670 dbSNP
rs1230030172 1672 dbSNP
rs1236090272 1676 dbSNP
rs550681920 1684 dbSNP
rs956935307 1685 dbSNP
rs1031031213 1694 dbSNP
rs1213044405 1700 dbSNP
rs1264832928 1706 dbSNP
rs943027337 1711 dbSNP
rs1443518426 1714 dbSNP
rs1194817126 1716 dbSNP
rs1257306022 1720 dbSNP
rs536840558 1724 dbSNP
rs1284129505 1744 dbSNP
rs796864097 1745 dbSNP
rs74097893 1748 dbSNP
rs1310355817 1755 dbSNP
rs1156957370 1759 dbSNP
rs933048974 1760 dbSNP
rs1029111862 1761 dbSNP
rs113318866 1761 dbSNP
rs919085007 1761 dbSNP
rs1420589538 1764 dbSNP
rs971896298 1771 dbSNP
rs899386525 1781 dbSNP
rs1448433018 1782 dbSNP
rs1284643990 1783 dbSNP
rs1344578655 1788 dbSNP
rs1037928831 1799 dbSNP
rs963303795 1807 dbSNP
rs1287601332 1811 dbSNP
rs1316106697 1812 dbSNP
rs940979778 1815 dbSNP
rs1278340328 1817 dbSNP
rs1421052042 1820 dbSNP
rs909116124 1831 dbSNP
rs185883956 1838 dbSNP
rs1360599437 1848 dbSNP
rs1238514904 1874 dbSNP
rs116607113 1875 dbSNP
rs559228797 1880 dbSNP
rs751104098 1881 dbSNP
rs1382325667 1882 dbSNP
rs938422353 1884 dbSNP
rs1023085263 1892 dbSNP
rs1400342754 1896 dbSNP
rs1175729296 1897 dbSNP
rs1014763361 1902 dbSNP
rs927037683 1903 dbSNP
rs1310807020 1908 dbSNP
rs979892368 1908 dbSNP
rs960112787 1916 dbSNP
rs1489520604 1919 dbSNP
rs1286847717 1922 dbSNP
rs1221782688 1930 dbSNP
rs1042024629 1934 dbSNP
rs1032275526 1935 dbSNP
rs1272646837 1936 dbSNP
rs1415410954 1936 dbSNP
rs138787280 1937 dbSNP
rs1457710573 1937 dbSNP
rs914464595 1937 dbSNP
rs998952993 1937 dbSNP
rs1197370903 1938 dbSNP
rs904815088 1940 dbSNP
rs1240588362 1941 dbSNP
rs1458217963 1942 dbSNP
rs1193123844 1943 dbSNP
rs956006238 1944 dbSNP
rs1043273007 1945 dbSNP
rs1276301209 1945 dbSNP
rs1401770490 1946 dbSNP
rs1340986449 1947 dbSNP
rs1031417187 1950 dbSNP
rs1321033445 1957 dbSNP
rs1333214291 1957 dbSNP
rs1400942652 1957 dbSNP
rs1427779405 1957 dbSNP
rs1439465072 1957 dbSNP
rs368455022 1957 dbSNP
rs539752952 1957 dbSNP
rs1260507386 1958 dbSNP
rs1455896240 1959 dbSNP
rs1209297109 1960 dbSNP
rs1265404366 1963 dbSNP
rs1351294211 1965 dbSNP
rs1165006827 1980 dbSNP
rs1007221325 1984 dbSNP
rs1419260950 1987 dbSNP
rs888785406 1990 dbSNP
rs1051394175 2000 dbSNP
rs954925662 2002 dbSNP
rs1191885940 2012 dbSNP
rs552140994 2013 dbSNP
rs1264480431 2019 dbSNP
rs1029038316 2021 dbSNP
rs1386860545 2023 dbSNP
rs996270720 2041 dbSNP
rs1198842641 2042 dbSNP
rs918981796 2043 dbSNP
rs1280547698 2044 dbSNP
rs1319171516 2059 dbSNP
rs1487534619 2064 dbSNP
rs1244782741 2065 dbSNP
rs1263744640 2067 dbSNP
rs1036633852 2079 dbSNP
rs1358488357 2080 dbSNP
rs1267517953 2081 dbSNP
rs1285525077 2082 dbSNP
rs899324521 2083 dbSNP
rs1222579573 2084 dbSNP
rs941824035 2086 dbSNP
rs1263721912 2093 dbSNP
rs909167101 2095 dbSNP
rs1016408794 2096 dbSNP
rs1370128292 2098 dbSNP
rs1255932233 2101 dbSNP
rs1157508155 2103 dbSNP
rs191398447 2106 dbSNP
rs563608938 2118 dbSNP
rs1300428410 2122 dbSNP
rs1341583807 2122 dbSNP
rs543928908 2124 dbSNP
rs886727233 2128 dbSNP
rs1311122300 2129 dbSNP
rs1342811185 2130 dbSNP
rs1245548291 2134 dbSNP
rs1318552345 2135 dbSNP
rs1351779938 2137 dbSNP
rs766832178 2139 dbSNP
rs1287031300 2143 dbSNP
rs1482769665 2163 dbSNP
rs1198550531 2164 dbSNP
rs938362360 2165 dbSNP
rs1424381187 2178 dbSNP
rs1342115261 2179 dbSNP
rs1177437468 2188 dbSNP
rs905586552 2196 dbSNP
rs1369100716 2204 dbSNP
rs1293539732 2209 dbSNP
rs574851202 2217 dbSNP
rs1044183460 2218 dbSNP
rs1465820478 2220 dbSNP
rs1301482832 2225 dbSNP
rs915900429 2233 dbSNP
rs143923677 2234 dbSNP
rs541276488 2235 dbSNP
rs914390995 2242 dbSNP
rs1031745102 2245 dbSNP
rs1467484043 2245 dbSNP
rs1374687710 2246 dbSNP
rs988700761 2255 dbSNP
rs1242412432 2266 dbSNP
rs1425033562 2270 dbSNP
rs1310212363 2271 dbSNP
rs1311855737 2273 dbSNP
rs1230768147 2278 dbSNP
rs1176320723 2282 dbSNP
rs977584845 2284 dbSNP
rs763495427 2287 dbSNP
rs1021713749 2292 dbSNP
rs912490640 2295 dbSNP
rs572766788 2299 dbSNP
rs1480441873 2302 dbSNP
rs1423969668 2304 dbSNP
rs1431142107 2325 dbSNP
rs1007766300 2333 dbSNP
rs1236537302 2342 dbSNP
rs559339274 2353 dbSNP
rs1030421639 2356 dbSNP
rs1470516068 2360 dbSNP
rs1331186217 2375 dbSNP
rs1398782542 2376 dbSNP
rs1449029903 2376 dbSNP
rs1298872123 2383 dbSNP
rs954753621 2390 dbSNP
rs750767957 2392 dbSNP
rs974778660 2394 dbSNP
rs963468128 2395 dbSNP
rs897592983 2408 dbSNP
rs1217786925 2410 dbSNP
rs1230986338 2411 dbSNP
rs1256029650 2412 dbSNP
rs1319943342 2413 dbSNP
rs1016376191 2414 dbSNP
rs1036110061 2415 dbSNP
rs1245663261 2416 dbSNP
rs1313828813 2417 dbSNP
rs1301389791 2422 dbSNP
rs766981172 2439 dbSNP
rs941876159 2454 dbSNP
rs887618797 2455 dbSNP
rs1267618247 2471 dbSNP
rs539420928 2473 dbSNP
rs1170438817 2487 dbSNP
rs1422086416 2488 dbSNP
rs1467683632 2489 dbSNP
rs1171222065 2491 dbSNP
rs1349432781 2493 dbSNP
rs947970883 2494 dbSNP
rs1295436278 2495 dbSNP
rs917813584 2496 dbSNP
rs993269905 2498 dbSNP
rs1276124345 2499 dbSNP
rs1342259388 2499 dbSNP
rs1219243719 2501 dbSNP
rs1401477404 2508 dbSNP
rs576950728 2517 dbSNP
rs1319334621 2521 dbSNP
rs1223170769 2524 dbSNP
rs556700193 2526 dbSNP
rs1265614486 2527 dbSNP
rs1487788299 2528 dbSNP
rs1302562840 2532 dbSNP
rs1193360365 2534 dbSNP
rs1261567216 2536 dbSNP
rs1479082972 2538 dbSNP
rs373005422 2540 dbSNP
rs1413704835 2541 dbSNP
rs76710073 2544 dbSNP
rs1176919933 2551 dbSNP
rs1439127096 2558 dbSNP
rs10715438 2560 dbSNP
rs1296109596 2560 dbSNP
rs1362283615 2560 dbSNP
rs1366401541 2560 dbSNP
rs1419372443 2560 dbSNP
rs1472579882 2560 dbSNP
rs374237874 2560 dbSNP
rs528123853 2560 dbSNP
rs548688227 2560 dbSNP
rs60685958 2560 dbSNP
rs776646442 2560 dbSNP
rs777682799 2560 dbSNP
rs977470251 2569 dbSNP
rs1378749788 2570 dbSNP
rs905514730 2572 dbSNP
rs1180726513 2573 dbSNP
rs1044108066 2576 dbSNP
rs537123798 2578 dbSNP
rs1489436107 2581 dbSNP
rs949105985 2593 dbSNP
rs1237360250 2594 dbSNP
rs1472121919 2598 dbSNP
rs1011328375 2599 dbSNP
rs1386011407 2601 dbSNP
rs1439302979 2611 dbSNP
rs1198468072 2613 dbSNP
rs568063060 2621 dbSNP
rs892925888 2625 dbSNP
rs548322983 2629 dbSNP
rs1357331421 2633 dbSNP
rs534545234 2645 dbSNP
rs1256486028 2646 dbSNP
rs1336807011 2649 dbSNP
rs986231899 2661 dbSNP
rs1237327009 2678 dbSNP
rs565632780 2680 dbSNP
rs1350968395 2684 dbSNP
rs1224659548 2687 dbSNP
rs796699233 2692 dbSNP
rs934516426 2708 dbSNP
rs1212926956 2717 dbSNP
rs1244304809 2727 dbSNP
rs186932012 2728 dbSNP
rs761343172 2733 dbSNP
rs1051035292 2738 dbSNP
rs997630730 2743 dbSNP
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rs1447350152 6190 dbSNP
rs1442288399 6193 dbSNP
rs1392341020 6199 dbSNP
rs1025280755 6202 dbSNP
rs1450515088 6204 dbSNP
rs1255515402 6209 dbSNP
rs1163137381 6218 dbSNP
rs1389271079 6218 dbSNP
rs533461725 6220 dbSNP
rs1407147715 6227 dbSNP
rs959014766 6228 dbSNP
rs1388015201 6229 dbSNP
rs1033369422 6245 dbSNP
rs1213057791 6247 dbSNP
rs1300131136 6249 dbSNP
rs1898304 6250 dbSNP
rs1285552631 6253 dbSNP
rs1243853910 6254 dbSNP
rs903636691 6259 dbSNP
rs551362139 6262 dbSNP
rs1209902756 6267 dbSNP
rs1034201910 6268 dbSNP
rs901737138 6269 dbSNP
rs1279849592 6273 dbSNP
rs1040252280 6277 dbSNP
rs1248286112 6279 dbSNP
rs1447919189 6281 dbSNP
rs1447231540 6288 dbSNP
rs943311812 6297 dbSNP
rs4520631 6300 dbSNP
rs1367222125 6307 dbSNP
rs1474026012 6317 dbSNP
rs1164347250 6320 dbSNP
rs1411274202 6325 dbSNP
rs1001762658 6326 dbSNP
rs1322779331 6327 dbSNP
rs1314218655 6328 dbSNP
rs189555864 6329 dbSNP
rs562645442 6337 dbSNP
rs1050222495 6338 dbSNP
rs542452010 6340 dbSNP
rs1156457394 6342 dbSNP
rs1287682160 6357 dbSNP
rs1326405518 6358 dbSNP
rs907143353 6359 dbSNP
rs1402018483 6366 dbSNP
rs1268338984 6374 dbSNP
rs931379243 6374 dbSNP
rs144188706 6375 dbSNP
rs1010071758 6378 dbSNP
rs972901512 6386 dbSNP
rs892467427 6390 dbSNP
rs1052361785 6395 dbSNP
rs1189203213 6406 dbSNP
rs936781740 6408 dbSNP
rs77306149 6419 dbSNP
rs1161550809 6423 dbSNP
rs540496882 6431 dbSNP
rs992392882 6432 dbSNP
rs578014950 6436 dbSNP
rs912852449 6444 dbSNP
rs987059230 6450 dbSNP
rs879870295 6458 dbSNP
rs959651743 6465 dbSNP
rs1396416353 6472 dbSNP
rs1190212694 6475 dbSNP
rs372002386 6483 dbSNP
rs1411110476 6484 dbSNP
rs1288362447 6485 dbSNP
rs979517514 6488 dbSNP
rs1230558510 6494 dbSNP
rs918275743 6498 dbSNP
rs1257417172 6499 dbSNP
rs571791685 6500 dbSNP
rs183668636 6507 dbSNP
rs1213913740 6509 dbSNP
rs1021144417 6514 dbSNP
rs1448909848 6520 dbSNP
rs377334410 6522 dbSNP
rs374654929 6527 dbSNP
rs973706986 6537 dbSNP
rs962521554 6541 dbSNP
rs1432704575 6542 dbSNP
rs1196969896 6543 dbSNP
rs1379642432 6545 dbSNP
rs1284732676 6549 dbSNP
rs1034497345 6555 dbSNP
rs980000955 6559 dbSNP
rs1227500104 6566 dbSNP
rs1368484196 6567 dbSNP
rs1309273835 6568 dbSNP
rs971632957 6572 dbSNP
rs1009297320 6585 dbSNP
rs756441266 6588 dbSNP
rs1384619970 6590 dbSNP
rs1302911629 6600 dbSNP
rs1235466572 6602 dbSNP
rs1331393732 6602 dbSNP
rs1332649400 6602 dbSNP
rs753132809 6604 dbSNP
rs191465317 6605 dbSNP
rs1007422478 6606 dbSNP
rs891684219 6607 dbSNP
rs1339283444 6613 dbSNP
rs1030988424 6616 dbSNP
rs1001254963 6623 dbSNP
rs889039123 6632 dbSNP
rs1432481609 6633 dbSNP
rs1049709277 6634 dbSNP
rs1454828794 6636 dbSNP
rs903975602 6640 dbSNP
rs767809624 6645 dbSNP
rs796619573 6646 dbSNP
rs1037511881 6653 dbSNP
rs1349265021 6655 dbSNP
rs1416413719 6656 dbSNP
rs796458303 6656 dbSNP
rs1167730991 6664 dbSNP
rs1475781450 6665 dbSNP
rs755292238 6668 dbSNP
rs891302784 6682 dbSNP
rs918088231 6687 dbSNP
rs751667753 6689 dbSNP
rs1476536893 6697 dbSNP
rs1231142239 6704 dbSNP
rs938212032 6705 dbSNP
rs1220630242 6706 dbSNP
rs1321717939 6717 dbSNP
rs1242684354 6720 dbSNP
rs1267225628 6721 dbSNP
rs1466971350 6733 dbSNP
rs187794947 6736 dbSNP
rs1214262151 6747 dbSNP
rs1317175616 6748 dbSNP
rs1292859336 6749 dbSNP
rs926872768 6755 dbSNP
rs539628967 6759 dbSNP
rs930225685 6759 dbSNP
rs1215778731 6761 dbSNP
rs918830902 6764 dbSNP
rs973790384 6765 dbSNP
rs1412958044 6767 dbSNP
rs968103042 6768 dbSNP
rs555858212 6772 dbSNP
rs927100495 6776 dbSNP
rs867070537 6778 dbSNP
rs980259081 6780 dbSNP
rs1007349121 6784 dbSNP
rs953298004 6790 dbSNP
rs796235775 6791 dbSNP
rs570506605 6792 dbSNP
rs1354433524 6805 dbSNP
rs778874513 6805 dbSNP
rs1168487743 6806 dbSNP
rs1024104092 6807 dbSNP
rs756489293 6830 dbSNP
rs750722846 6841 dbSNP
rs183449152 6846 dbSNP
rs955978600 6850 dbSNP
rs1420579547 6855 dbSNP
rs1266468394 6869 dbSNP
rs1004293092 6870 dbSNP
rs1236617277 6883 dbSNP
rs896581597 6893 dbSNP
rs192882609 6894 dbSNP
rs1000907572 6895 dbSNP
rs968461147 6899 dbSNP
rs1018235570 6905 dbSNP
rs1254685164 6910 dbSNP
rs188789303 6911 dbSNP
rs1413698724 6916 dbSNP
rs1400871210 6919 dbSNP
rs1457291388 6943 dbSNP
rs183158717 6944 dbSNP
rs1446341702 6945 dbSNP
rs891188151 6952 dbSNP
rs1051295710 6955 dbSNP
rs1356731415 6956 dbSNP
rs1409272743 6969 dbSNP
rs926868851 6992 dbSNP
rs1307560299 6998 dbSNP
rs1044347993 7002 dbSNP
rs1224506144 7003 dbSNP
rs1278214848 7007 dbSNP
rs760420441 7009 dbSNP
rs947025826 7009 dbSNP
rs1212809894 7015 dbSNP
rs1231639477 7016 dbSNP
rs1372657942 7031 dbSNP
rs1306139672 7032 dbSNP
rs913548664 7043 dbSNP
rs1482722602 7046 dbSNP
rs994320088 7054 dbSNP
rs1179946207 7057 dbSNP
rs1253294045 7060 dbSNP
rs897452158 7063 dbSNP
rs965727611 7065 dbSNP
rs571135371 7077 dbSNP
rs139440049 7078 dbSNP
rs926967546 7081 dbSNP
rs531380877 7100 dbSNP
rs1044036644 7101 dbSNP
rs1000686338 7102 dbSNP
rs1173034660 7109 dbSNP
rs949831212 7114 dbSNP
rs1433131624 7122 dbSNP
rs953321636 7129 dbSNP
rs1306754128 7135 dbSNP
rs916978293 7137 dbSNP
rs1438833035 7138 dbSNP
rs568834902 7139 dbSNP
rs973727042 7147 dbSNP
rs988643679 7157 dbSNP
rs1303802077 7173 dbSNP
rs1248414679 7174 dbSNP
rs955864331 7178 dbSNP
rs925775146 7179 dbSNP
rs1015570128 7187 dbSNP
rs75375375 7194 dbSNP
rs1244607677 7195 dbSNP
rs896550621 7201 dbSNP
rs964635792 7213 dbSNP
rs1208060780 7222 dbSNP
rs1018705405 7225 dbSNP
rs1035118298 7233 dbSNP
rs1058981 7234 dbSNP
rs560360067 7241 dbSNP
rs1280581519 7242 dbSNP
rs1235562460 7249 dbSNP
rs190773255 7262 dbSNP
rs1399309912 7264 dbSNP
rs1410604527 7267 dbSNP
rs1305240385 7270 dbSNP
rs745573292 7274 dbSNP
rs897339299 7281 dbSNP
rs1038510379 7285 dbSNP
rs1312392841 7286 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-1 , BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796037. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796038. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796037
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000266604.2 | 3UTR | UCAAGUUUUCAUUUAAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796038
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-1 / 4-Thiouridine
Location of target site ENST00000266604.2 | 3UTR | UCAAGUUUUCAUUUAAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000266604.2 | 3UTR | UUGGCACUUUAUUUUUAA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE27834 Pluripotent stem cells -0.642 3.7e-3 -0.485 2.8e-2 16 Click to see details
GSE28260 Renal cortex and medulla 0.675 5.7e-3 0.698 4.0e-3 13 Click to see details
GSE28544 Breast cancer -0.475 9.5e-3 -0.313 6.8e-2 24 Click to see details
GSE38226 Liver fibrosis 0.435 2.4e-2 0.374 4.7e-2 21 Click to see details
GSE26953 Aortic valvular endothelial cells 0.397 2.7e-2 0.501 6.3e-3 24 Click to see details
GSE32688 Pancreatic cancer -0.33 3.3e-2 -0.392 1.3e-2 32 Click to see details
GSE17306 Multiple myeloma 0.133 1.8e-1 0.452 5.6e-4 49 Click to see details
GSE14794 Lymphoblastoid cells 0.092 1.9e-1 0.093 1.9e-1 90 Click to see details
GSE15076 Monocyte-derived dendritic cells -0.544 2.3e-1 -0.800 1.0e-1 4 Click to see details
GSE42095 Differentiated embryonic stem cells -0.152 2.4e-1 -0.195 1.9e-1 23 Click to see details
GSE21687 Ependynoma primary tumors -0.076 2.8e-1 -0.152 1.2e-1 64 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis 0.056 4.1e-1 -0.280 1.2e-1 20 Click to see details
GSE19350 CNS germ cell tumors 0.021 4.7e-1 -0.175 2.9e-1 12 Click to see details
GSE38974 Chronic obstructive pulmonary disease -0.011 4.8e-1 -0.157 2.3e-1 25 Click to see details
GSE21849 B cell lymphoma 0 5.0e-1 -0.020 4.6e-1 29 Click to see details
GSE21849 B cell lymphoma 0 5.0e-1 -0.020 4.6e-1 29 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
109 hsa-miR-302b-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT088427 LCLAT1 lysocardiolipin acyltransferase 1 2 4
MIRT142406 TNRC6A trinucleotide repeat containing 6A 2 2
MIRT162006 TFRC transferrin receptor 2 2
MIRT170893 PURB purine rich element binding protein B 2 2
MIRT203348 CCNT2 cyclin T2 2 4
MIRT207353 TGOLN2 trans-golgi network protein 2 2 2
MIRT208232 CNBP CCHC-type zinc finger nucleic acid binding protein 2 4
MIRT214733 HSPA9 heat shock protein family A (Hsp70) member 9 2 2
MIRT254842 NUP50 nucleoporin 50 2 2
MIRT257285 FOXC1 forkhead box C1 2 2
MIRT338890 LLPH LLP homolog, long-term synaptic facilitation 2 2
MIRT400032 USP37 ubiquitin specific peptidase 37 2 2
MIRT404031 ATP9A ATPase phospholipid transporting 9A (putative) 2 8
MIRT405843 EIF2S1 eukaryotic translation initiation factor 2 subunit alpha 2 2
MIRT445847 FPGT fucose-1-phosphate guanylyltransferase 2 2
MIRT446350 EML6 echinoderm microtubule associated protein like 6 2 2
MIRT446649 BTBD7 BTB domain containing 7 2 2
MIRT447925 SCRN1 secernin 1 2 2
MIRT448575 PLCG1 phospholipase C gamma 1 2 2
MIRT463616 ZBTB33 zinc finger and BTB domain containing 33 2 4
MIRT465782 TMOD3 tropomodulin 3 2 2
MIRT470261 PRR14L proline rich 14 like 2 2
MIRT471090 PIK3C2B phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta 2 2
MIRT475612 HMGB1 high mobility group box 1 2 2
MIRT476824 FNDC3A fibronectin type III domain containing 3A 2 2
MIRT483107 TYRP1 tyrosinase related protein 1 2 10
MIRT500537 XPO4 exportin 4 2 2
MIRT502525 EPHA2 EPH receptor A2 2 4
MIRT510989 PER1 period circadian clock 1 2 4
MIRT512540 ZNF793 zinc finger protein 793 2 4
MIRT513868 HOXA5 homeobox A5 2 2
MIRT520756 TFDP1 transcription factor Dp-1 2 6
MIRT524304 CTC1 CST telomere replication complex component 1 2 8
MIRT526306 JAKMIP2 janus kinase and microtubule interacting protein 2 2 2
MIRT526378 LSAMP limbic system-associated membrane protein 2 2
MIRT527438 COL4A3 collagen type IV alpha 3 chain 2 2
MIRT527511 ZNF134 zinc finger protein 134 2 2
MIRT528068 HES2 hes family bHLH transcription factor 2 2 2
MIRT528367 ZMYM1 zinc finger MYM-type containing 1 2 4
MIRT531804 TFCP2L1 transcription factor CP2 like 1 2 2
MIRT532323 DUSP4 dual specificity phosphatase 4 2 2
MIRT532431 DHX33 DEAH-box helicase 33 2 2
MIRT534523 SAR1A secretion associated Ras related GTPase 1A 2 2
MIRT536660 INIP INTS3 and NABP interacting protein 2 2
MIRT538488 CLOCK clock circadian regulator 2 2
MIRT538593 CDK6 cyclin dependent kinase 6 2 2
MIRT539706 EIF3H eukaryotic translation initiation factor 3 subunit H 2 2
MIRT540306 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 2
MIRT546892 PURA purine rich element binding protein A 2 2
MIRT552738 YRDC yrdC N6-threonylcarbamoyltransferase domain containing 2 2
MIRT552781 YIPF6 Yip1 domain family member 6 2 2
MIRT553742 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 4
MIRT553909 SUMO2 small ubiquitin-like modifier 2 2 2
MIRT554540 RRS1 ribosome biogenesis regulator homolog 2 2
MIRT555319 PPP2CB protein phosphatase 2 catalytic subunit beta 2 2
MIRT555512 PMEPA1 prostate transmembrane protein, androgen induced 1 2 2
MIRT556221 MB21D2 Mab-21 domain containing 2 2 2
MIRT556292 MAP3K5 mitogen-activated protein kinase kinase kinase 5 2 2
MIRT556606 LDOC1L retrotransposon Gag like 6 2 4
MIRT556901 ISOC1 isochorismatase domain containing 1 2 2
MIRT557675 GATA6 GATA binding protein 6 2 2
MIRT560198 GXYLT2 glucoside xylosyltransferase 2 2 2
MIRT560493 BUB3 BUB3, mitotic checkpoint protein 2 2
MIRT566069 RCC2 regulator of chromosome condensation 2 2 2
MIRT568431 GDNF glial cell derived neurotrophic factor 2 2
MIRT570703 FAM69A family with sequence similarity 69 member A 2 2
MIRT571705 RPL36A-HNRNPH2 RPL36A-HNRNPH2 readthrough 2 2
MIRT573152 ITGA9 integrin subunit alpha 9 2 2
MIRT574410 TFAP2A transcription factor AP-2 alpha 2 2
MIRT614823 PVRL4 nectin cell adhesion molecule 4 2 2
MIRT616507 COX7A2L cytochrome c oxidase subunit 7A2 like 2 2
MIRT618301 COL4A4 collagen type IV alpha 4 chain 2 2
MIRT621188 FAM153B family with sequence similarity 153 member B 2 2
MIRT621594 WT1 Wilms tumor 1 2 2
MIRT623814 GGCX gamma-glutamyl carboxylase 2 2
MIRT624407 CCDC171 coiled-coil domain containing 171 2 2
MIRT625136 CKAP2L cytoskeleton associated protein 2 like 2 2
MIRT626121 MRRF mitochondrial ribosome recycling factor 2 2
MIRT626874 AP3B1 adaptor related protein complex 3 beta 1 subunit 2 2
MIRT627874 PAN2 PAN2 poly(A) specific ribonuclease subunit 2 2
MIRT633670 FAM53B family with sequence similarity 53 member B 2 2
MIRT634285 SYAP1 synapse associated protein 1 2 2
MIRT640925 POU2F1 POU class 2 homeobox 1 2 2
MIRT642028 MYADM myeloid associated differentiation marker 2 2
MIRT643031 CHCHD7 coiled-coil-helix-coiled-coil-helix domain containing 7 2 2
MIRT646122 SLC26A9 solute carrier family 26 member 9 2 2
MIRT646245 SNAP47 synaptosome associated protein 47 2 2
MIRT652457 TMEM2 transmembrane protein 2 2 2
MIRT657018 KCNK5 potassium two pore domain channel subfamily K member 5 2 2
MIRT660586 APP amyloid beta precursor protein 2 2
MIRT664316 CD209 CD209 molecule 2 2
MIRT667113 OLA1 Obg like ATPase 1 2 2
MIRT668773 DCP2 decapping mRNA 2 2 2
MIRT698430 TM4SF1 transmembrane 4 L six family member 1 2 2
MIRT700216 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT710498 CAPRIN1 cell cycle associated protein 1 2 2
MIRT711836 AMOTL2 angiomotin like 2 2 2
MIRT713226 GPR75 G protein-coupled receptor 75 2 2
MIRT714415 TBC1D16 TBC1 domain family member 16 2 2
MIRT714490 HSPA4 heat shock protein family A (Hsp70) member 4 2 2
MIRT715254 F9 coagulation factor IX 2 2
MIRT716250 PALM2 paralemmin 2 2 2
MIRT717261 BMPR2 bone morphogenetic protein receptor type 2 2 2
MIRT717730 FGF1 fibroblast growth factor 1 2 2
MIRT719262 CD44 CD44 molecule (Indian blood group) 2 2
MIRT719398 SLC15A4 solute carrier family 15 member 4 2 2
MIRT720653 TMEM218 transmembrane protein 218 2 2
MIRT720777 MSANTD3-TMEFF1 MSANTD3-TMEFF1 readthrough 2 2
MIRT722059 TMEFF1 transmembrane protein with EGF like and two follistatin like domains 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-302b Epirubicin approved 41867 Microarray osteosarcoma cells 23845851 2013 down-regualted
miR-302b Glucose NULL 5793 Quantitative real-time PCR endothelial cells 24394957 2014 down-regulated
miR-302b 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 up-regulated
miR-302b 1,2,6-Tri-O-galloyl-beta-D-glucopyranose NULL NULL Microarray HepG2 hepatocarcinoma cells. 22506400 2011 down-regulated
miR-302b (S)-3,5-dihydroxyphenylglycine (DHPG) NULL 443586 Quantitative real-time PCR mouse brain 22309833 2012 down-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-302b Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-302b-5p Paclitaxel 36314 NSC125973 approved sensitive High Laryngeal Cancer cell line (Hep2)
hsa-miR-302b-5p Celastrol 12302620 NSC70931 sensitive Low Gastric Cancer cell line (AGS)
hsa-miR-302b-5p Docetaxel 148124 NSC628503 approved sensitive Low Gastric Cancer cell line (AGS)
hsa-miR-302b-5p Doxorubicin 31703 NSC123127 approved sensitive Low Gastric Cancer cell line (AGS)
hsa-miR-302b-5p Taxol 36314 NSC125973 approved sensitive Low Gastric Cancer cell line (AGS)
hsa-miR-302b-5p Gefitinib 123631 NSC715055 approved sensitive cell line (HCC827)
hsa-miR-302b-5p Osimertinib 71496458 NSC779217 approved sensitive cell line (HCC827)
hsa-miR-302b-5p Fluorouracil 3385 NSC19893 approved resistant cell line (KM12C) (72 h)
hsa-miR-302b-5p Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-302b-5p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-302b-5p Paclitaxel/Docetaxel/Vinorelbine/Doxorubicin/Etoposide sensitive cell line (Bads-200)

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