miRTarBase - #MIRT384907


—
pre-miRNA Information
pre-miRNA hsa-mir-7110   
Genomic Coordinates chr3: 123161794 - 123161879
Description Homo sapiens miR-7110 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-7110-3p
Sequence 65| UCUCUCUCCCACUUCCCUGCAG |86
Evidence Experimental
Experiments Meta-analysis
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30629632 7 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs933023636 4 dbSNP
rs529799363 6 dbSNP
rs57948168 7 dbSNP
rs1172032316 9 dbSNP
rs566496167 10 dbSNP
rs903348975 11 dbSNP
rs532110591 12 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol ATP2B1   
Synonyms PMCA1, PMCA1kb
Description ATPase plasma membrane Ca2+ transporting 1
Transcript NM_001001323   
Other Transcripts NM_001682   
Expression
Putative miRNA Targets on ATP2B1
3'UTR of ATP2B1
(miRNA target sites are highlighted)		 
>ATP2B1|NM_001001323|3'UTR
   1 TTCTTTATATGAAGGGTTAGAAAAACCGGAATCAAGAAGTTCGATTCACAACTTTATGACACATCCTGAGTTTAGGATAG
  81 AAGATTCAGAGCCTCATATCCCCCTTATTGATGACACTGATGCCGAAGATGATGCTCCTACAAAACGTAACTCCAGTCCT
 161 CCACCCTCTCCCAACAAAAATAACAATGCTGTTGACAGTGGAATTCACCTTACAATAGAAATGAACAAGTCTGCTACCTC
 241 TTCATCCCCAGGAAGCCCACTACATAGTTTGGAAACATCACTCTGATTGTAAGCTGAATGTTAACACACTAGCTGCATTG
 321 TAAAGAAACAAATTGAAACTGGGTCTTTTCACATATTGTGATGGACAAGCTAGTATTCTTGTCTTTGGACTTCAACAGAA
 401 GACACACTTGTACGAATGTAGATTTATTTTTTTAAAAAAAAAAAAGCAAAGCTTTCTGCCAGACTGAGGGTGCTTTTTGG
 481 GGGGTGGGAGAAATGAACTGACAGATAAACAGTAACTCAGCGTAAGTGACCTGTGGATCATCAGTAGTACCCAAGCATGG
 561 TCCTGAACAGTGTATTAGCAGAGCTTTAGTTTATCTCAGTCCTGGATGGGAGAGAGAGGGAGGAGTAAAACTGGGCAAGA
 641 CAAAGAGCCCTGGATCGTTGAATTGATAGTTTAATTTCTGCTGTTGGCTGTTAATAATTTGGATTATTTATGTTTATAAA
 721 TGATACAGATCTGTTTACAAGGTTTGTAGATACTTTTTTTGTTCCTGTTCATAGATGGGAAGCTTCCTTATAACTGATGC
 801 AGAGAAAAATTAGTCCTTCAAATACTGCTGTATTTTCAGGAAAAAAAAAAAAAGGGGTGTTTCTATTGAAACTGTACTAA
 881 ATTTTTGCCTACAATTTACCTTGTTAAATATTGTAGATAAATTGCTAATACTAATAGCCAAATAGATAACACTAATGCTT
 961 TGTTTAAAAAAACGAAAAAAACAAAACAAAACAAAAAAACATGAGCAGTGGTGTTCTAATGAAGTTATGACATCTGTCCT
1041 AATTAGTTTCTTAAATACATTTACTACTTAATGGTTTTGAAGCAACTGTTTAATTTTTAAAATTTTTGAAAACTTGCTAA
1121 TAACCTTTTGTTCAGAATTTAGTAGATTGTTTAATGCAGGACATCAACTACATAATGAAAGATGCTTGAAATGCTTTTGT
1201 TATTTCAGGCAAATCAAATTAAATCAGACTATCAAACTACAAGAGAACCTTAGTCTTTTTTGTTTTTGTCTAAACATGTT
1281 AGTTTAGTGATGTCTTGGTGAACTGTGAGTGAACTGTATTGATTTTTCTAATCTTTAGAGACCTTCACACAGCATGAGGG
1361 CTGTTGGCATTTTGAAAAAGGTTAATAAGTAGAAGCATACATGTTTTCCTTTTGTTTTTGAAACTTGTTTGTAAACATAA
1441 ATAAATATGCCCTTTTATTAAATAAATTCATGGCAATGTTTTTTTAAAAGACATTTCAGCTTCTTTACTCAGTTCTGCAT
1521 ATACAGTGCATCAGTCTGTTCTCTTTGACCACAATTGGAATACATTTCAAGATGGTAACAGCCCCATGAAGTACCGCTTT
1601 AATTCCTTGCTGGTAATCTAATAGAATCAGATTAAGAAAATTAACACAATTTTACCATTTGACATACTCTTCATTGAATT
1681 TAGTTTGTCTAAAATAGTCTCACAGGTAAAAAACATAACAACAATGACCACCATTGTCTTTGATACATTTATTTTAATTC
1761 TTAAGTGGCCAAATAACAGATTAGGTAAAATGAGATTACATGAAAAGGTTCTAAAATGATATATTTAGATGCAATAATTA
1841 ACCATATGCTAGAATGCCCACCTCTAAGCCAATTGGATTCTTTAGCTCTCTTTTTCTTTCCTTCATCTACCTTCTTCTCT
1921 TTTTTGCCTCTGTCTTTACCCTTTAGAAACTGGCATGTGTTAGGGCCCAGATTTCACCAGATACACAATCCTCAGGCTGA
2001 CATAAAGTTTACGAGGACTGCTACTATAACTGAGAGTGCTGACCAAGCAAAGAAACATTTAGTTGATGGTGCTTGATATT
2081 TTTGGTGGGTGGGGGAAATCTTTTTCTCACCATCAAATCTTTGCAGTAATCCTCTGCAGGTCTTAGAAACACATTGGCTC
2161 TGTCAGCATTTGTAATTGTACATTTATTCATCAGGTATTTATAGTGAATCATACTGTAAAAAAGAGGTAGCATGATATGC
2241 TGGAAAGCATATTAGACTAGGAGTCAAGACCTGGTTTCTAGTCTTGGTTTTGCCATTAATGTGCTGCATGATCTTGGGAA
2321 AATCATTTACCCTAAATAAGGGTGGTGGACTATCTTGAAGAACCCTTTCAACTCTAAAAATTGACCCTATCAACTGGAGA
2401 GCCCACAAGGCATAGGGAATAGAGAAAAGGGAAATGTTTTCAGTTTTCTTTTTTATTTTGGTTATGCTTAAATATGAATG
2481 TAATTACCAAAAGATTTAGAAGTGCATGTGCTTTGGAGGATTTGTATTGAGCTTTTACAGTATTCATTTTTCAACTCAAG
2561 GCAATGGCTTTCTACACCAACTCTAATCCATAAACGGGTCTTATGACATCTATGAAGTAGTAGCAAGACATGCTTAGTGT
2641 GTATTTCTCTCTTTGAGACACTGTAATTTCTACCAGAAATTTCCAGAGCATTATGTAGGTAGAAAAAAATGCAAGCAAGC
2721 TGTTAAAGATCTTGGATCCCATTATATAGTATGTATAGCTGAAATCTGTAATTCAATCACTTTTTCTCTTTTATCCTCTA
2801 ACCAAAAAATTGTTTAATTTTGCATCCCAAATGTTTTTAATCTTTGTATATTTTTTAAAAATCCTTTTCTCCTCATCATT
2881 GCCTTTTTTGTGGTTGTAAATAGACTTACTTGCACTTTGAAGATGAGTTACTCCTTGTCATCTTACAAATATGTGATATG
2961 GTAATTTTCATAACAGATGTCAGTTTTGAACCAAGAATTGGTGATTTGTTTATAAGAAAAAAACTGGCTTCATTTCTGTG
3041 AAATTGCTCTTTGAAAATTTCTTTTTACACGTGTAAGCCAACTGAGATACCGTGATGGTGTTGATTTCTTTCAATGATGC
3121 TTACCATCTATTTTAGCCACTGAGCCTTTTATTATTTGTCTATTTGTAAAGTTTATTTGTCTTAACTCATTTAATAAATA
3201 TACTGTTTATCTGTTTCTGAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' gacGUC----CCUUCACCCUCUCUCu 5'
             |||    |||  |||||||||| 
Target 5' tctCAGTCCTGGA--TGGGAGAGAGa 3'
 594 - 617 161.00 -23.70
2 
miRNA  3' gacguCCCUUCACCCUCUCUcu 5'
               |||::|||||||| |  
Target 5' tttttGGGGGGTGGGAGAAAtg 3'
 474 - 495 125.00 -22.80
3 
miRNA  3' gacGUCCCUUCACCCUCUCUcu 5'
             ::| ||| || ||| ||  
Target 5' tctTGGTGAACTGTGAGTGAac 3'
 1293 - 1314 111.00 -7.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
784251 43 ClinVar
COSM6505314 15 COSMIC
COSM5722022 16 COSMIC
COSM4777429 29 COSMIC
COSM3466281 36 COSMIC
COSM274090 42 COSMIC
COSM8768514 44 COSMIC
COSM8840175 64 COSMIC
COSM944300 86 COSMIC
COSM8000736 100 COSMIC
COSM4489481 104 COSMIC
COSM944299 124 COSMIC
COSM6607580 125 COSMIC
COSM341696 158 COSMIC
COSM9325934 159 COSMIC
COSM5901769 170 COSMIC
COSM1995141 199 COSMIC
COSM7880791 201 COSMIC
COSM1323023 203 COSMIC
COSM3813166 207 COSMIC
COSM5788975 209 COSMIC
COSM6041588 233 COSMIC
COSM6863118 265 COSMIC
COSM4399475 283 COSMIC
COSN13423618 301 COSMIC
COSN13423605 413 COSMIC
COSN13423603 433 COSMIC
COSN29237637 433 COSMIC
COSN1153467 434 COSMIC
COSN18736676 434 COSMIC
COSN31528476 512 COSMIC
COSN21938565 728 COSMIC
COSN27020025 800 COSMIC
COSN20109935 841 COSMIC
COSN7386490 852 COSMIC
COSN30161317 916 COSMIC
COSN30158050 952 COSMIC
COSN31602960 974 COSMIC
COSN31484866 1215 COSMIC
COSN31484874 1333 COSMIC
COSN21053635 1828 COSMIC
COSN20092620 1834 COSMIC
COSN28753364 1905 COSMIC
COSN31544156 2012 COSMIC
COSN31519032 2092 COSMIC
COSN31480970 2234 COSMIC
COSN31576901 2252 COSMIC
COSN30539752 2324 COSMIC
COSN31531417 2442 COSMIC
COSN30540795 2615 COSMIC
COSN31485733 2647 COSMIC
COSN17076518 2679 COSMIC
COSN21292824 2744 COSMIC
COSN31547679 2766 COSMIC
COSN30174507 2970 COSMIC
COSN31520560 3061 COSMIC
COSN30025292 3101 COSMIC
COSN31549297 3203 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs750107374 7 dbSNP
rs922455554 11 dbSNP
rs1193655088 19 dbSNP
rs1448450923 22 dbSNP
rs764946874 27 dbSNP
rs369985301 28 dbSNP
rs1348461756 34 dbSNP
rs753652453 39 dbSNP
rs61736878 43 dbSNP
rs760644092 51 dbSNP
rs1343870393 55 dbSNP
rs1270345905 56 dbSNP
rs775232867 59 dbSNP
rs1342838731 61 dbSNP
rs1296715330 64 dbSNP
rs766483886 65 dbSNP
rs762977872 67 dbSNP
rs751758239 73 dbSNP
rs769982978 75 dbSNP
rs762207543 77 dbSNP
rs375435006 78 dbSNP
rs777051043 81 dbSNP
rs1474229555 91 dbSNP
rs1167399411 94 dbSNP
rs1168782733 95 dbSNP
rs769105123 96 dbSNP
rs373795130 97 dbSNP
rs1430921894 100 dbSNP
rs1192612429 101 dbSNP
rs1187281735 108 dbSNP
rs945772727 121 dbSNP
rs369043635 123 dbSNP
rs771742877 124 dbSNP
rs745346247 125 dbSNP
rs778746156 129 dbSNP
rs756961753 131 dbSNP
rs753630481 135 dbSNP
rs145954787 139 dbSNP
rs1276734987 140 dbSNP
rs1218353534 142 dbSNP
rs755798585 146 dbSNP
rs752708878 147 dbSNP
rs767392262 152 dbSNP
rs763071645 153 dbSNP
rs200151950 154 dbSNP
rs1329583707 162 dbSNP
rs1006793896 164 dbSNP
rs142404163 165 dbSNP
rs765510384 166 dbSNP
rs542927109 168 dbSNP
rs768025980 181 dbSNP
rs567298131 194 dbSNP
rs769073869 195 dbSNP
rs1804194 198 dbSNP
rs1355562266 199 dbSNP
rs760909886 207 dbSNP
rs1232996052 209 dbSNP
rs1205959647 211 dbSNP
rs766556813 213 dbSNP
rs115449702 215 dbSNP
rs547400437 217 dbSNP
rs533915498 219 dbSNP
rs1315261008 221 dbSNP
rs778548106 223 dbSNP
rs1379026306 225 dbSNP
rs1280230470 227 dbSNP
rs1187586517 233 dbSNP
rs770504242 234 dbSNP
rs575636800 236 dbSNP
rs763192699 241 dbSNP
rs748973397 245 dbSNP
rs1340316854 246 dbSNP
rs777250567 248 dbSNP
rs755957995 249 dbSNP
rs375770738 252 dbSNP
rs1270609447 260 dbSNP
rs781149320 261 dbSNP
rs754907837 264 dbSNP
rs1437209295 265 dbSNP
rs1237030912 270 dbSNP
rs1193941893 278 dbSNP
rs933995617 279 dbSNP
rs750559957 280 dbSNP
rs918582704 283 dbSNP
rs761736147 288 dbSNP
rs1321656694 289 dbSNP
rs773115766 307 dbSNP
rs191454131 308 dbSNP
rs1457857537 309 dbSNP
rs1374837999 314 dbSNP
rs551140844 317 dbSNP
rs775990335 331 dbSNP
rs768192439 333 dbSNP
rs962753584 343 dbSNP
rs531539802 352 dbSNP
rs1393421599 355 dbSNP
rs1433139408 356 dbSNP
rs1316668442 360 dbSNP
rs1305216095 373 dbSNP
rs931453054 375 dbSNP
rs897198104 384 dbSNP
rs1037216277 387 dbSNP
rs368755572 397 dbSNP
rs1214013740 398 dbSNP
rs1321035465 399 dbSNP
rs1397995195 403 dbSNP
rs1266954641 405 dbSNP
rs909072014 413 dbSNP
rs879404210 433 dbSNP
rs562508539 434 dbSNP
rs928789187 434 dbSNP
rs948968233 435 dbSNP
rs1312361371 437 dbSNP
rs78076751 445 dbSNP
rs371640664 446 dbSNP
rs957818392 446 dbSNP
rs989514046 446 dbSNP
rs1031137246 447 dbSNP
rs977935555 449 dbSNP
rs965230330 459 dbSNP
rs769927537 462 dbSNP
rs1362396641 463 dbSNP
rs1459073134 467 dbSNP
rs1301161033 470 dbSNP
rs971086069 479 dbSNP
rs186661759 480 dbSNP
rs1026995530 484 dbSNP
rs1010013944 495 dbSNP
rs1207672508 507 dbSNP
rs1254875862 518 dbSNP
rs995886625 520 dbSNP
rs1166543851 521 dbSNP
rs892910160 522 dbSNP
rs1471902338 524 dbSNP
rs1181893941 529 dbSNP
rs1054584074 542 dbSNP
rs1473676784 543 dbSNP
rs541026380 546 dbSNP
rs1424041626 548 dbSNP
rs1037547186 564 dbSNP
rs143710306 568 dbSNP
rs889912756 570 dbSNP
rs1466582254 574 dbSNP
rs1304664982 600 dbSNP
rs1368568815 606 dbSNP
rs1051388369 611 dbSNP
rs1288748294 612 dbSNP
rs1352143636 614 dbSNP
rs1044541533 615 dbSNP
rs1300113774 617 dbSNP
rs1488972472 619 dbSNP
rs1234705823 622 dbSNP
rs148868798 626 dbSNP
rs918615092 642 dbSNP
rs1205123416 645 dbSNP
rs914773055 649 dbSNP
rs1053468923 657 dbSNP
rs1189875360 660 dbSNP
rs1424644184 661 dbSNP
rs1036974005 669 dbSNP
rs1259352668 678 dbSNP
rs114701386 680 dbSNP
rs1388476360 690 dbSNP
rs182144764 701 dbSNP
rs1428995688 706 dbSNP
rs866234045 710 dbSNP
rs199802801 712 dbSNP
rs909977361 716 dbSNP
rs991274672 720 dbSNP
rs1292854594 725 dbSNP
rs1231579178 733 dbSNP
rs181112736 740 dbSNP
rs1367848369 761 dbSNP
rs1804195 763 dbSNP
rs1298803587 764 dbSNP
rs1381565750 765 dbSNP
rs1382620597 767 dbSNP
rs1295073679 771 dbSNP
rs912438844 779 dbSNP
rs556457454 787 dbSNP
rs1219750706 789 dbSNP
rs1246550797 791 dbSNP
rs1488929406 793 dbSNP
rs1195782179 809 dbSNP
rs1246243517 816 dbSNP
rs1448893332 822 dbSNP
rs536979147 827 dbSNP
rs1421496588 830 dbSNP
rs1162309291 836 dbSNP
rs1478555906 837 dbSNP
rs1163797333 839 dbSNP
rs1397035482 840 dbSNP
rs1027295117 841 dbSNP
rs995418436 852 dbSNP
rs189510463 853 dbSNP
rs1227176454 854 dbSNP
rs1299193305 854 dbSNP
rs1435109041 854 dbSNP
rs1491367208 854 dbSNP
rs759096688 854 dbSNP
rs77159805 854 dbSNP
rs1491196117 855 dbSNP
rs1266394376 859 dbSNP
rs568123770 859 dbSNP
rs1464623129 869 dbSNP
rs780600127 876 dbSNP
rs1002955141 877 dbSNP
rs1471751415 889 dbSNP
rs765762740 894 dbSNP
rs1469166987 930 dbSNP
rs1462781733 943 dbSNP
rs1044552799 950 dbSNP
rs1013008252 973 dbSNP
rs1457496799 973 dbSNP
rs893404466 973 dbSNP
rs1272827479 974 dbSNP
rs1446438037 974 dbSNP
rs1055137094 978 dbSNP
rs1235459363 982 dbSNP
rs1286905483 982 dbSNP
rs1380572425 982 dbSNP
rs1212048603 983 dbSNP
rs971286705 991 dbSNP
rs1320164381 997 dbSNP
rs1270857382 998 dbSNP
rs1209544979 1000 dbSNP
rs1440722336 1000 dbSNP
rs934915797 1000 dbSNP
rs1226693695 1001 dbSNP
rs188331243 1007 dbSNP
rs1009919459 1009 dbSNP
rs956992129 1011 dbSNP
rs1472698283 1014 dbSNP
rs869309686 1023 dbSNP
rs943771175 1024 dbSNP
rs1393453516 1032 dbSNP
rs912287845 1043 dbSNP
rs1323549762 1046 dbSNP
rs771804306 1052 dbSNP
rs1376574980 1057 dbSNP
rs954037294 1058 dbSNP
rs919757210 1059 dbSNP
rs1466876776 1067 dbSNP
rs1281449828 1084 dbSNP
rs869048491 1096 dbSNP
rs869061067 1103 dbSNP
rs1007048705 1108 dbSNP
rs1400492291 1113 dbSNP
rs1279494896 1116 dbSNP
rs1486609708 1123 dbSNP
rs1202987151 1124 dbSNP
rs1250775661 1130 dbSNP
rs1483233732 1130 dbSNP
rs1183767166 1131 dbSNP
rs889992679 1133 dbSNP
rs974433551 1142 dbSNP
rs745549634 1144 dbSNP
rs1459985035 1147 dbSNP
rs1015552427 1148 dbSNP
rs183753564 1152 dbSNP
rs897428633 1154 dbSNP
rs1201600254 1164 dbSNP
rs1037212729 1168 dbSNP
rs971465473 1170 dbSNP
rs538876125 1176 dbSNP
rs1331307042 1185 dbSNP
rs941369834 1188 dbSNP
rs1012981568 1197 dbSNP
rs147827425 1199 dbSNP
rs1459261282 1200 dbSNP
rs1273926096 1206 dbSNP
rs1273781072 1210 dbSNP
rs1342796022 1214 dbSNP
rs577775232 1241 dbSNP
rs1197318148 1255 dbSNP
rs1195322838 1257 dbSNP
rs1337505623 1262 dbSNP
rs1257757628 1270 dbSNP
rs1450651670 1283 dbSNP
rs1234916621 1284 dbSNP
rs1370087593 1285 dbSNP
rs1296373304 1293 dbSNP
rs762169278 1297 dbSNP
rs182085535 1298 dbSNP
rs537514187 1303 dbSNP
rs1448673415 1313 dbSNP
rs1462997797 1317 dbSNP
rs938082293 1318 dbSNP
rs1389077172 1319 dbSNP
rs1336008804 1336 dbSNP
rs1326774233 1341 dbSNP
rs1327744488 1344 dbSNP
rs1389214595 1345 dbSNP
rs1432911253 1350 dbSNP
rs1296987835 1358 dbSNP
rs1403710472 1369 dbSNP
rs1229567221 1376 dbSNP
rs927172774 1386 dbSNP
rs981292396 1391 dbSNP
rs1174884557 1400 dbSNP
rs1263431254 1401 dbSNP
rs1355315681 1404 dbSNP
rs1210243835 1414 dbSNP
rs1274585867 1417 dbSNP
rs1463279067 1421 dbSNP
rs144498091 1425 dbSNP
rs1187374538 1427 dbSNP
rs949836722 1428 dbSNP
rs769621257 1440 dbSNP
rs1042082931 1448 dbSNP
rs903394784 1448 dbSNP
rs913159002 1449 dbSNP
rs1166114354 1451 dbSNP
rs1396895103 1461 dbSNP
rs988686776 1462 dbSNP
rs957099678 1465 dbSNP
rs1319930954 1468 dbSNP
rs890778741 1469 dbSNP
rs1049535150 1476 dbSNP
rs1033081401 1479 dbSNP
rs1441876196 1479 dbSNP
rs1339807096 1485 dbSNP
rs932411891 1486 dbSNP
rs1294962201 1490 dbSNP
rs985253388 1490 dbSNP
rs953909098 1492 dbSNP
rs1233715512 1496 dbSNP
rs1260781695 1498 dbSNP
rs1486534079 1501 dbSNP
rs973895014 1511 dbSNP
rs1029388464 1516 dbSNP
rs1254611442 1519 dbSNP
rs1436210703 1524 dbSNP
rs1189082831 1526 dbSNP
rs998318456 1527 dbSNP
rs1471718388 1533 dbSNP
rs548760600 1534 dbSNP
rs897291669 1542 dbSNP
rs1015840386 1554 dbSNP
rs1347103697 1555 dbSNP
rs1301180504 1558 dbSNP
rs1401392350 1571 dbSNP
rs1005752765 1575 dbSNP
rs1242121309 1584 dbSNP
rs1314455364 1585 dbSNP
rs971391875 1595 dbSNP
rs529199758 1596 dbSNP
rs1278655323 1609 dbSNP
rs1055517754 1610 dbSNP
rs1230368233 1617 dbSNP
rs957473758 1649 dbSNP
rs1485611203 1651 dbSNP
rs1212283794 1661 dbSNP
rs189382715 1664 dbSNP
rs1482254169 1672 dbSNP
rs1312958788 1679 dbSNP
rs906624319 1682 dbSNP
rs760288696 1685 dbSNP
rs998999258 1687 dbSNP
rs949866013 1694 dbSNP
rs1174037392 1695 dbSNP
rs1377180131 1697 dbSNP
rs1435237593 1702 dbSNP
rs913067106 1707 dbSNP
rs903456135 1709 dbSNP
rs1019232373 1714 dbSNP
rs988760809 1716 dbSNP
rs1311569457 1719 dbSNP
rs935902011 1721 dbSNP
rs1172185192 1722 dbSNP
rs1408924855 1724 dbSNP
rs1402847944 1725 dbSNP
rs1409158747 1727 dbSNP
rs184669349 1732 dbSNP
rs925662482 1733 dbSNP
rs199725396 1737 dbSNP
rs1299957460 1746 dbSNP
rs1468803440 1754 dbSNP
rs368365294 1763 dbSNP
rs547071716 1765 dbSNP
rs193169766 1780 dbSNP
rs1485374938 1782 dbSNP
rs961560353 1783 dbSNP
rs1255374248 1785 dbSNP
rs188263725 1797 dbSNP
rs1454735075 1800 dbSNP
rs531694153 1822 dbSNP
rs1195587718 1828 dbSNP
rs1005825513 1834 dbSNP
rs1283307559 1835 dbSNP
rs1170877963 1843 dbSNP
rs1356108211 1846 dbSNP
rs1456216438 1847 dbSNP
rs563113412 1850 dbSNP
rs142302847 1871 dbSNP
rs1033908005 1872 dbSNP
rs574236056 1873 dbSNP
rs1294839956 1887 dbSNP
rs939844403 1890 dbSNP
rs1002624734 1892 dbSNP
rs1214541622 1892 dbSNP
rs1358062807 1893 dbSNP
rs1309582470 1898 dbSNP
rs184891660 1899 dbSNP
rs1293475698 1900 dbSNP
rs75724051 1905 dbSNP
rs1352988541 1909 dbSNP
rs577586567 1914 dbSNP
rs1261881051 1919 dbSNP
rs1186980974 1926 dbSNP
rs1292043368 1926 dbSNP
rs1433519383 1927 dbSNP
rs1346241652 1928 dbSNP
rs1421602018 1929 dbSNP
rs1318112112 1930 dbSNP
rs1399273119 1932 dbSNP
rs1421761274 1932 dbSNP
rs1397024785 1934 dbSNP
rs192554541 1937 dbSNP
rs949961728 1941 dbSNP
rs867411406 1944 dbSNP
rs945436125 1964 dbSNP
rs891662592 1967 dbSNP
rs1052919112 1970 dbSNP
rs926029777 1975 dbSNP
rs1226908211 1988 dbSNP
rs1415746999 2002 dbSNP
rs1335726645 2007 dbSNP
rs935823985 2012 dbSNP
rs925873406 2013 dbSNP
rs1475701759 2017 dbSNP
rs977891070 2018 dbSNP
rs1241406416 2019 dbSNP
rs1049628589 2026 dbSNP
rs1243715973 2028 dbSNP
rs932349616 2043 dbSNP
rs1186952457 2044 dbSNP
rs767320695 2052 dbSNP
rs763100965 2055 dbSNP
rs922266725 2063 dbSNP
rs548214852 2065 dbSNP
rs1475971076 2068 dbSNP
rs773956750 2070 dbSNP
rs1156442472 2077 dbSNP
rs976501909 2088 dbSNP
rs961094333 2091 dbSNP
rs1400718338 2096 dbSNP
rs1319734984 2097 dbSNP
rs1019117041 2098 dbSNP
rs1009193618 2102 dbSNP
rs1453094035 2108 dbSNP
rs908276592 2116 dbSNP
rs537986986 2133 dbSNP
rs984709708 2137 dbSNP
rs1212677009 2147 dbSNP
rs1286609060 2153 dbSNP
rs1028415902 2157 dbSNP
rs996499808 2160 dbSNP
rs952877920 2178 dbSNP
rs1310364599 2197 dbSNP
rs1258154390 2200 dbSNP
rs1486491767 2203 dbSNP
rs898259729 2205 dbSNP
rs1470335364 2207 dbSNP
rs1159760345 2212 dbSNP
rs748501716 2214 dbSNP
rs750659973 2215 dbSNP
rs1038144675 2219 dbSNP
rs568857405 2223 dbSNP
rs1003902790 2224 dbSNP
rs1332138314 2224 dbSNP
rs1416959236 2225 dbSNP
rs1327330869 2226 dbSNP
rs1335368654 2227 dbSNP
rs781606657 2243 dbSNP
rs1214604316 2245 dbSNP
rs1363294462 2248 dbSNP
rs868762341 2255 dbSNP
rs1045538193 2261 dbSNP
rs949971862 2262 dbSNP
rs915794856 2270 dbSNP
rs1349989376 2271 dbSNP
rs1024967049 2273 dbSNP
rs1009675998 2279 dbSNP
rs936039974 2294 dbSNP
rs536527690 2295 dbSNP
rs977568275 2305 dbSNP
rs967454243 2310 dbSNP
rs147561508 2313 dbSNP
rs569260037 2321 dbSNP
rs904355048 2336 dbSNP
rs1166514250 2341 dbSNP
rs1029225226 2349 dbSNP
rs1050143523 2352 dbSNP
rs932575086 2353 dbSNP
rs995476744 2363 dbSNP
rs186789568 2364 dbSNP
rs1440201233 2366 dbSNP
rs1017001939 2372 dbSNP
rs1373051834 2374 dbSNP
rs1003956654 2382 dbSNP
rs1269360959 2393 dbSNP
rs1339757035 2401 dbSNP
rs546514746 2404 dbSNP
rs746596996 2409 dbSNP
rs1287247816 2424 dbSNP
rs1045548130 2448 dbSNP
rs1014014123 2453 dbSNP
rs1254410895 2455 dbSNP
rs1455956992 2460 dbSNP
rs1192702125 2461 dbSNP
rs1191593844 2462 dbSNP
rs533058071 2473 dbSNP
rs1475923068 2480 dbSNP
rs1170030478 2485 dbSNP
rs1040705555 2493 dbSNP
rs1055744493 2499 dbSNP
rs1259533656 2504 dbSNP
rs561721298 2506 dbSNP
rs1326982137 2510 dbSNP
rs1229315377 2523 dbSNP
rs1291256133 2528 dbSNP
rs926016583 2538 dbSNP
rs908308903 2554 dbSNP
rs1233587837 2588 dbSNP
rs1274680323 2589 dbSNP
rs983849193 2595 dbSNP
rs571648330 2596 dbSNP
rs946123083 2597 dbSNP
rs953030620 2599 dbSNP
rs1273000792 2603 dbSNP
rs370780260 2604 dbSNP
rs770761133 2609 dbSNP
rs911951892 2618 dbSNP
rs1165850029 2630 dbSNP
rs79224935 2636 dbSNP
rs932164149 2655 dbSNP
rs1158123001 2673 dbSNP
rs1385544946 2679 dbSNP
rs970950347 2682 dbSNP
rs776976693 2686 dbSNP
rs1354523616 2691 dbSNP
rs749181051 2692 dbSNP
rs531877745 2710 dbSNP
rs764660742 2714 dbSNP
rs1314787560 2719 dbSNP
rs1016601143 2725 dbSNP
rs982378023 2726 dbSNP
rs145069315 2733 dbSNP
rs182188093 2739 dbSNP
rs1219505062 2740 dbSNP
rs1319134415 2742 dbSNP
rs1189128917 2744 dbSNP
rs951147205 2746 dbSNP
rs1417604457 2749 dbSNP
rs1369082393 2751 dbSNP
rs1032880666 2753 dbSNP
rs1013946959 2755 dbSNP
rs1171611359 2766 dbSNP
rs894343418 2774 dbSNP
rs1435051189 2776 dbSNP
rs1314544404 2779 dbSNP
rs207473236 2780 dbSNP
rs1034595129 2781 dbSNP
rs1000120518 2786 dbSNP
rs368205120 2790 dbSNP
rs1307068846 2797 dbSNP
rs904406582 2808 dbSNP
rs1000951855 2810 dbSNP
rs1278758186 2810 dbSNP
rs1347813449 2812 dbSNP
rs1212010359 2816 dbSNP
rs1041754882 2827 dbSNP
rs1479774804 2845 dbSNP
rs904385521 2848 dbSNP
rs1436510629 2850 dbSNP
rs890445399 2856 dbSNP
rs1051875385 2869 dbSNP
rs1454687451 2871 dbSNP
rs529527096 2872 dbSNP
rs1461303267 2875 dbSNP
rs767033371 2875 dbSNP
rs973938372 2878 dbSNP
rs1398218214 2880 dbSNP
rs996611340 2881 dbSNP
rs1302114861 2882 dbSNP
rs1480056558 2890 dbSNP
rs942303820 2892 dbSNP
rs1230696847 2893 dbSNP
rs908090388 2905 dbSNP
rs982431833 2906 dbSNP
rs560640090 2913 dbSNP
rs1252060542 2915 dbSNP
rs1459298558 2920 dbSNP
rs901111937 2922 dbSNP
rs1040906783 2928 dbSNP
rs939693274 2931 dbSNP
rs1252527536 2934 dbSNP
rs1486960193 2949 dbSNP
rs1281611691 2952 dbSNP
rs951074384 2953 dbSNP
rs1417299044 2954 dbSNP
rs550755291 2959 dbSNP
rs1346132516 2964 dbSNP
rs1309509283 2970 dbSNP
rs540947852 2971 dbSNP
rs1459611752 2977 dbSNP
rs1324620593 2978 dbSNP
rs1394505571 2978 dbSNP
rs1372789212 2980 dbSNP
rs1295763307 2988 dbSNP
rs1360518820 2991 dbSNP
rs190989654 3003 dbSNP
rs1296790508 3008 dbSNP
rs1320264998 3022 dbSNP
rs1231749054 3024 dbSNP
rs992576732 3024 dbSNP
rs1468915750 3025 dbSNP
rs772571379 3026 dbSNP
rs1416643733 3044 dbSNP
rs532558288 3052 dbSNP
rs1376044068 3057 dbSNP
rs1240230930 3060 dbSNP
rs1312165063 3066 dbSNP
rs915170355 3070 dbSNP
rs1034195550 3071 dbSNP
rs557782456 3081 dbSNP
rs1159487835 3084 dbSNP
rs1474112309 3090 dbSNP
rs543868502 3091 dbSNP
rs988351372 3092 dbSNP
rs1462516274 3106 dbSNP
rs956727402 3108 dbSNP
rs1343917777 3113 dbSNP
rs187826578 3114 dbSNP
rs979950088 3125 dbSNP
rs1342704448 3135 dbSNP
rs953508852 3143 dbSNP
rs1029463976 3144 dbSNP
rs890492384 3145 dbSNP
rs1292857284 3151 dbSNP
rs1335752388 3158 dbSNP
rs745504181 3162 dbSNP
rs996643768 3171 dbSNP
rs1051761753 3179 dbSNP
rs1258878452 3182 dbSNP
rs1316259805 3184 dbSNP
rs201293852 3189 dbSNP
rs1216343703 3201 dbSNP
rs1265254629 3209 dbSNP
rs900974804 3210 dbSNP
rs900549314 3222 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HeLa
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in Chi_124A_2A8_130_50. RNA binding protein: AGO. Condition:HeLa cell miR-124 + A ...

- Chi SW; Zang JB; Mele A; Darnell RB, 2009, Nature.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' gacgucccuucaCCCUCUCUCu 5'
                      | ||||||| 
Target 5' ------------GAGAGAGAGg 3'
 		1 - 10
Article - Chi SW; Zang JB; Mele A; Darnell RB
- Nature, 2009
MicroRNAs (miRNAs) have critical roles in the regulation of gene expression; however, as miRNA activity requires base pairing with only 6-8 nucleotides of messenger RNA, predicting target mRNAs is a major challenge. Recently, high-throughput sequencing of RNAs isolated by crosslinking immunoprecipitation (HITS-CLIP) has identified functional protein-RNA interaction sites. Here we use HITS-CLIP to covalently crosslink native argonaute (Ago, also called Eif2c) protein-RNA complexes in mouse brain. This produced two simultaneous data sets-Ago-miRNA and Ago-mRNA binding sites-that were combined with bioinformatic analysis to identify interaction sites between miRNA and target mRNA. We validated genome-wide interaction maps for miR-124, and generated additional maps for the 20 most abundant miRNAs present in P13 mouse brain. Ago HITS-CLIP provides a general platform for exploring the specificity and range of miRNA action in vivo, and identifies precise sequences for targeting clinically relevant miRNA-mRNA interactions.
LinkOut: [PMID: 19536157]
CLIP-seq Support 1 for dataset Chi_124A_2A8_130_50
Method / RBP HITS-CLIP / AGO
Cell line / Condition HeLa / HeLa cell miR-124 + A
Location of target site ENST00000261173.2 | 3UTR | GAGAGAGAGGGAGGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 19536157 / Chi_HITSCLIP
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
342 hsa-miR-7110-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT082983 KHSRP KH-type splicing regulatory protein 2 2
MIRT234314 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT287120 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 2
MIRT292290 TGFBR3 transforming growth factor beta receptor 3 2 2
MIRT312255 DIAPH1 diaphanous related formin 1 2 2
MIRT384907 ATP2B1 ATPase plasma membrane Ca2+ transporting 1 2 2
MIRT390883 ANTXR2 anthrax toxin receptor 2 2 2
MIRT395373 CDC42EP4 CDC42 effector protein 4 2 2
MIRT396751 RDX radixin 2 4
MIRT442600 SIX1 SIX homeobox 1 2 2
MIRT443088 PTPRN2 protein tyrosine phosphatase, receptor type N2 2 2
MIRT448987 ARL15 ADP ribosylation factor like GTPase 15 2 2
MIRT483987 PANK1 pantothenate kinase 1 2 4
MIRT499233 VAV3 vav guanine nucleotide exchange factor 3 2 4
MIRT506650 MAPK1 mitogen-activated protein kinase 1 2 6
MIRT512272 ARHGDIA Rho GDP dissociation inhibitor alpha 2 6
MIRT515228 GPATCH11 G-patch domain containing 11 2 6
MIRT520713 TMCO1 transmembrane and coiled-coil domains 1 2 8
MIRT526527 MDM2 MDM2 proto-oncogene 2 6
MIRT526652 C17orf105 chromosome 17 open reading frame 105 2 6
MIRT526668 IL5RA interleukin 5 receptor subunit alpha 2 6
MIRT536723 IGF1R insulin like growth factor 1 receptor 2 2
MIRT537027 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 2
MIRT539905 MTA3 metastasis associated 1 family member 3 2 11
MIRT540192 SH3PXD2A SH3 and PX domains 2A 2 8
MIRT540469 MC2R melanocortin 2 receptor 2 9
MIRT540586 ERCC1 ERCC excision repair 1, endonuclease non-catalytic subunit 2 4
MIRT541343 FRMD3 FERM domain containing 3 2 4
MIRT542703 RPS15A ribosomal protein S15a 2 2
MIRT543153 AKT1 AKT serine/threonine kinase 1 2 2
MIRT543264 ZNF662 zinc finger protein 662 2 2
MIRT551388 EHD3 EH domain containing 3 2 2
MIRT569346 EFHC1 EF-hand domain containing 1 2 2
MIRT571949 LARP1 La ribonucleoprotein domain family member 1 2 2
MIRT575098 Mta3 metastasis associated 3 2 7
MIRT575106 Mc2r melanocortin 2 receptor 2 6
MIRT575132 Myo1f myosin IF 2 4
MIRT575397 Zdhhc22 zinc finger, DHHC-type containing 22 2 3
MIRT575405 Rnf152 ring finger protein 152 2 4
MIRT576209 Baz2a bromodomain adjacent to zinc finger domain, 2A 2 4
MIRT576245 Asah2 N-acylsphingosine amidohydrolase 2 2 5
MIRT606791 RREB1 ras responsive element binding protein 1 2 8
MIRT606862 YAE1D1 Yae1 domain containing 1 2 6
MIRT607087 RNF152 ring finger protein 152 2 5
MIRT607210 ASAH2 N-acylsphingosine amidohydrolase 2 2 7
MIRT607224 ACSM2A acyl-CoA synthetase medium chain family member 2A 2 4
MIRT607235 LINS lines homolog 1 2 4
MIRT607263 GRAMD1B GRAM domain containing 1B 2 6
MIRT607279 CPEB3 cytoplasmic polyadenylation element binding protein 3 2 4
MIRT607299 CD300E CD300e molecule 2 6
MIRT607363 TNS1 tensin 1 2 4
MIRT609543 ADPRH ADP-ribosylarginine hydrolase 2 2
MIRT609568 CATSPER4 cation channel sperm associated 4 2 2
MIRT609691 EMX2 empty spiracles homeobox 2 2 2
MIRT609848 ZNF557 zinc finger protein 557 2 2
MIRT610227 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 5
MIRT610389 FOXE1 forkhead box E1 2 2
MIRT610431 ASAH2B N-acylsphingosine amidohydrolase 2B 2 2
MIRT610765 ARNT aryl hydrocarbon receptor nuclear translocator 2 2
MIRT611103 MYO1F myosin IF 2 5
MIRT611128 STARD7 StAR related lipid transfer domain containing 7 2 2
MIRT611287 PAGR1 PAXIP1 associated glutamate rich protein 1 2 2
MIRT611758 PLA2G7 phospholipase A2 group VII 2 6
MIRT612409 STRN striatin 2 6
MIRT612682 PLXNA4 plexin A4 2 2
MIRT613175 CYLD CYLD lysine 63 deubiquitinase 2 2
MIRT613696 QPRT quinolinate phosphoribosyltransferase 2 2
MIRT613741 GK5 glycerol kinase 5 (putative) 2 4
MIRT613916 POU3F1 POU class 3 homeobox 1 2 2
MIRT614281 WSCD2 WSC domain containing 2 2 2
MIRT614289 NPAP1 nuclear pore associated protein 1 2 2
MIRT614664 ZNF280B zinc finger protein 280B 2 2
MIRT614771 SLC41A2 solute carrier family 41 member 2 2 2
MIRT614854 PLEKHA6 pleckstrin homology domain containing A6 2 4
MIRT614887 PARD3B par-3 family cell polarity regulator beta 2 2
MIRT615052 DCAF12 DDB1 and CUL4 associated factor 12 2 2
MIRT615195 CLUAP1 clusterin associated protein 1 2 2
MIRT615337 ABCC12 ATP binding cassette subfamily C member 12 2 2
MIRT615344 LONRF1 LON peptidase N-terminal domain and ring finger 1 2 2
MIRT615685 NAV2 neuron navigator 2 2 2
MIRT615767 ENTPD5 ectonucleoside triphosphate diphosphohydrolase 5 2 2
MIRT615844 ZDHHC22 zinc finger DHHC-type containing 22 2 3
MIRT615866 HSPA6 heat shock protein family A (Hsp70) member 6 2 2
MIRT615999 WDR59 WD repeat domain 59 2 2
MIRT616246 MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 2 4
MIRT616342 DPF3 double PHD fingers 3 2 2
MIRT617185 GOSR2 golgi SNAP receptor complex member 2 2 4
MIRT617244 SPATS2 spermatogenesis associated serine rich 2 2 2
MIRT617524 SORCS2 sortilin related VPS10 domain containing receptor 2 2 2
MIRT617656 RWDD1 RWD domain containing 1 2 2
MIRT618017 SLC9A3R2 SLC9A3 regulator 2 2 2
MIRT618116 OPRM1 opioid receptor mu 1 2 2
MIRT618226 CST3 cystatin C 2 2
MIRT618407 AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 2 2
MIRT618483 SIGLEC15 sialic acid binding Ig like lectin 15 2 2
MIRT618612 SHOX short stature homeobox 2 2
MIRT618641 ATP6AP1L ATPase H+ transporting accessory protein 1 like 2 2
MIRT619069 BSND barttin CLCNK type accessory beta subunit 2 4
MIRT619105 IFI44L interferon induced protein 44 like 2 2
MIRT619268 QRSL1 glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1 2 4
MIRT619286 FAM26E calcium homeostasis modulator family member 5 2 2
MIRT619365 CFHR5 complement factor H related 5 2 2
MIRT619379 KLHL12 kelch like family member 12 2 2
MIRT619471 PRDM10 PR/SET domain 10 2 4
MIRT619488 QSOX2 quiescin sulfhydryl oxidase 2 2 2
MIRT619509 TXLNB taxilin beta 2 2
MIRT619549 GABRG2 gamma-aminobutyric acid type A receptor gamma2 subunit 2 2
MIRT619941 C8orf33 chromosome 8 open reading frame 33 2 2
MIRT620021 NFAM1 NFAT activating protein with ITAM motif 1 2 2
MIRT620178 EGFLAM EGF like, fibronectin type III and laminin G domains 2 2
MIRT620552 C10orf10 chromosome 10 open reading frame 10 2 4
MIRT620639 RFT1 RFT1 homolog 2 2
MIRT620706 ZYG11B zyg-11 family member B, cell cycle regulator 2 2
MIRT620733 CCL16 C-C motif chemokine ligand 16 2 2
MIRT620746 CCR5 C-C motif chemokine receptor 5 (gene/pseudogene) 2 2
MIRT620836 ZNF551 zinc finger protein 551 2 2
MIRT620848 ATG10 autophagy related 10 2 2
MIRT620925 LRRTM2 leucine rich repeat transmembrane neuronal 2 2 2
MIRT621407 VPS18 VPS18, CORVET/HOPS core subunit 2 2
MIRT621435 CABP7 calcium binding protein 7 2 2
MIRT621560 ZFP1 ZFP1 zinc finger protein 2 2
MIRT621911 TAB1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 2 2
MIRT622036 STAT5A signal transducer and activator of transcription 5A 2 2
MIRT622066 SS18 SS18, nBAF chromatin remodeling complex subunit 2 2
MIRT622119 SPRY3 sprouty RTK signaling antagonist 3 2 2
MIRT622270 SH3TC2 SH3 domain and tetratricopeptide repeats 2 2 2
MIRT622511 RBM20 RNA binding motif protein 20 2 2
MIRT622606 PROM1 prominin 1 2 2
MIRT622636 PPAP2B phospholipid phosphatase 3 2 2
MIRT622692 PLSCR1 phospholipid scramblase 1 2 2
MIRT622732 PITPNM3 PITPNM family member 3 2 4
MIRT622776 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT622855 PDGFA platelet derived growth factor subunit A 2 2
MIRT622911 PCDH17 protocadherin 17 2 2
MIRT622998 ONECUT3 one cut homeobox 3 2 2
MIRT623104 NLGN4X neuroligin 4, X-linked 2 2
MIRT623123 NEURL1B neuralized E3 ubiquitin protein ligase 1B 2 2
MIRT623537 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT623706 HHAT hedgehog acyltransferase 2 2
MIRT623757 GRID1 glutamate ionotropic receptor delta type subunit 1 2 2
MIRT623770 GPR37L1 G protein-coupled receptor 37 like 1 2 2
MIRT623960 FBXL16 F-box and leucine rich repeat protein 16 2 2
MIRT624045 ELAVL3 ELAV like RNA binding protein 3 2 2
MIRT624120 DNAH10OS dynein axonemal heavy chain 10 opposite strand 2 2
MIRT624261 CSNK2A1 casein kinase 2 alpha 1 2 4
MIRT624460 CALCOCO2 calcium binding and coiled-coil domain 2 2 2
MIRT624470 CADM2 cell adhesion molecule 2 2 2
MIRT624495 CABP4 calcium binding protein 4 2 2
MIRT624742 ANKRD28 ankyrin repeat domain 28 2 2
MIRT625305 SHISA6 shisa family member 6 2 2
MIRT625454 RANGAP1 Ran GTPase activating protein 1 2 2
MIRT625951 OLIG3 oligodendrocyte transcription factor 3 2 2
MIRT626507 ATP1A3 ATPase Na+/K+ transporting subunit alpha 3 2 2
MIRT626523 TSC1 TSC complex subunit 1 2 2
MIRT626909 NRN1 neuritin 1 2 2
MIRT627927 KANSL1 KAT8 regulatory NSL complex subunit 1 2 2
MIRT628036 LSAMP limbic system-associated membrane protein 2 4
MIRT628121 HRK harakiri, BCL2 interacting protein 2 2
MIRT628154 HIP1 huntingtin interacting protein 1 2 2
MIRT628205 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT628762 MX2 MX dynamin like GTPase 2 2 4
MIRT628943 AICDA activation induced cytidine deaminase 2 2
MIRT629759 STK17A serine/threonine kinase 17a 2 2
MIRT629935 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT630149 ZDHHC9 zinc finger DHHC-type containing 9 2 2
MIRT630434 LHX9 LIM homeobox 9 2 2
MIRT632932 FGF9 fibroblast growth factor 9 2 2
MIRT635075 MICA MHC class I polypeptide-related sequence A 2 2
MIRT635101 PLCL1 phospholipase C like 1 (inactive) 2 2
MIRT635195 NFKBID NFKB inhibitor delta 2 2
MIRT635815 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT636506 GDAP1L1 ganglioside induced differentiation associated protein 1 like 1 2 2
MIRT637301 ACTN2 actinin alpha 2 2 2
MIRT638307 SCO1 SCO1, cytochrome c oxidase assembly protein 2 2
MIRT638340 RCAN1 regulator of calcineurin 1 2 2
MIRT638955 BHLHB9 basic helix-loop-helix family member b9 2 2
MIRT639271 SLC5A12 solute carrier family 5 member 12 2 4
MIRT639355 TBXA2R thromboxane A2 receptor 2 2
MIRT639534 CD86 CD86 molecule 2 2
MIRT640147 CEP104 centrosomal protein 104 2 2
MIRT640425 COG6 component of oligomeric golgi complex 6 2 2
MIRT641232 SEMA3E semaphorin 3E 2 2
MIRT641417 SCN2B sodium voltage-gated channel beta subunit 2 2 2
MIRT641796 USP32 ubiquitin specific peptidase 32 2 2
MIRT642048 KIAA1161 myogenesis regulating glycosidase (putative) 2 2
MIRT642427 STAT3 signal transducer and activator of transcription 3 2 2
MIRT642482 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT642737 TDRD6 tudor domain containing 6 2 2
MIRT643103 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT643311 TMEM151B transmembrane protein 151B 2 2
MIRT643622 ABCF3 ATP binding cassette subfamily F member 3 2 2
MIRT643734 CTU1 cytosolic thiouridylase subunit 1 2 2
MIRT644061 IQCE IQ motif containing E 2 2
MIRT644162 GIN1 gypsy retrotransposon integrase 1 2 2
MIRT644376 ZNF286A zinc finger protein 286A 2 2
MIRT644519 TADA2A transcriptional adaptor 2A 2 2
MIRT644566 SPOP speckle type BTB/POZ protein 2 2
MIRT645046 ID4 inhibitor of DNA binding 4, HLH protein 2 2
MIRT645311 AGTRAP angiotensin II receptor associated protein 2 2
MIRT645329 C9orf64 chromosome 9 open reading frame 64 2 2
MIRT645337 DHRS3 dehydrogenase/reductase 3 2 2
MIRT645410 FAM110A family with sequence similarity 110 member A 2 2
MIRT645922 PLXNA3 plexin A3 2 2
MIRT645957 TTF2 transcription termination factor 2 2 2
MIRT646210 DUSP10 dual specificity phosphatase 10 2 2
MIRT646553 TMCC2 transmembrane and coiled-coil domain family 2 2 2
MIRT646799 EVC2 EvC ciliary complex subunit 2 2 2
MIRT647231 OR6A2 olfactory receptor family 6 subfamily A member 2 2 2
MIRT647256 PTGDR2 prostaglandin D2 receptor 2 2 2
MIRT647618 IGSF9B immunoglobulin superfamily member 9B 2 2
MIRT647659 FOXL1 forkhead box L1 2 2
MIRT648009 ZNF431 zinc finger protein 431 2 2
MIRT648490 CMBL carboxymethylenebutenolidase homolog 2 2
MIRT649372 ASCL1 achaete-scute family bHLH transcription factor 1 2 2
MIRT649443 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT649458 WDR70 WD repeat domain 70 2 2
MIRT649543 VAMP8 vesicle associated membrane protein 8 2 2
MIRT649554 FAM20B FAM20B, glycosaminoglycan xylosylkinase 2 2
MIRT650273 KLF2 Kruppel like factor 2 2 4
MIRT650443 CPXM2 carboxypeptidase X, M14 family member 2 2 2
MIRT650640 LTF lactotransferrin 2 2
MIRT650825 LZTR1 leucine zipper like transcription regulator 1 2 2
MIRT650951 INMT indolethylamine N-methyltransferase 2 2
MIRT651089 ZNF516 zinc finger protein 516 2 2
MIRT651329 ZCCHC2 zinc finger CCHC-type containing 2 2 2
MIRT651406 ZBTB12 zinc finger and BTB domain containing 12 2 2
MIRT651514 WNT4 Wnt family member 4 2 4
MIRT651571 WDR77 WD repeat domain 77 2 2
MIRT651987 UBE2H ubiquitin conjugating enzyme E2 H 2 4
MIRT652091 TSKU tsukushi, small leucine rich proteoglycan 2 2
MIRT652388 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT652426 TMEM239 transmembrane protein 239 2 2
MIRT652606 TIMM8A translocase of inner mitochondrial membrane 8A 2 2
MIRT652747 TGFA transforming growth factor alpha 2 4
MIRT652810 TBL2 transducin beta like 2 2 2
MIRT653253 SORD sorbitol dehydrogenase 2 2
MIRT653298 SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 2 2
MIRT653344 SMG7 SMG7, nonsense mediated mRNA decay factor 2 2
MIRT653402 SLCO5A1 solute carrier organic anion transporter family member 5A1 2 2
MIRT653508 SLC43A2 solute carrier family 43 member 2 2 2
MIRT653582 SLC35B3 solute carrier family 35 member B3 2 2
MIRT653774 SIX4 SIX homeobox 4 2 2
MIRT653909 SERTAD4 SERTA domain containing 4 2 2
MIRT653937 SERPINC1 serpin family C member 1 2 2
MIRT654248 RIMS4 regulating synaptic membrane exocytosis 4 2 2
MIRT654684 PSMB5 proteasome subunit beta 5 2 2
MIRT654734 PRLR prolactin receptor 2 2
MIRT655437 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 2
MIRT655855 NFE2L1 nuclear factor, erythroid 2 like 1 2 2
MIRT656077 MTFR1L mitochondrial fission regulator 1 like 2 2
MIRT656663 LPP LIM domain containing preferred translocation partner in lipoma 2 2
MIRT657297 HOXB5 homeobox B5 2 2
MIRT657410 HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 2 2
MIRT657438 HHIP hedgehog interacting protein 2 2
MIRT657633 GPX8 glutathione peroxidase 8 (putative) 2 2
MIRT657864 GJD2 gap junction protein delta 2 2 2
MIRT657952 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658494 EXOC7 exocyst complex component 7 2 2
MIRT658682 EMP2 epithelial membrane protein 2 2 2
MIRT659026 DHTKD1 dehydrogenase E1 and transketolase domain containing 1 2 2
MIRT659087 DENR density regulated re-initiation and release factor 2 2
MIRT659127 DENND5B DENN domain containing 5B 2 2
MIRT659419 COL4A4 collagen type IV alpha 4 chain 2 2
MIRT660014 C1orf115 chromosome 1 open reading frame 115 2 4
MIRT660297 BICC1 BicC family RNA binding protein 1 2 2
MIRT660782 AKAP2 A-kinase anchoring protein 2 2 2
MIRT660801 AIFM2 apoptosis inducing factor, mitochondria associated 2 2 2
MIRT661570 EPHX2 epoxide hydrolase 2 2 2
MIRT662198 MEI1 meiotic double-stranded break formation protein 1 2 2
MIRT662606 MAGEB4 MAGE family member B4 2 2
MIRT663443 FBXO2 F-box protein 2 2 2
MIRT663794 DDX53 DEAD-box helicase 53 2 2
MIRT664336 RAB8A RAB8A, member RAS oncogene family 2 2
MIRT664751 SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 2 2
MIRT665495 VAPA VAMP associated protein A 2 2
MIRT666450 SETBP1 SET binding protein 1 2 4
MIRT666741 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT666827 PRCP prolylcarboxypeptidase 2 2
MIRT667502 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT667624 LIMCH1 LIM and calponin homology domains 1 2 2
MIRT668226 GABRA1 gamma-aminobutyric acid type A receptor alpha1 subunit 2 2
MIRT669054 CELSR3 cadherin EGF LAG seven-pass G-type receptor 3 2 2
MIRT669142 CD200 CD200 molecule 2 2
MIRT669414 ATP9A ATPase phospholipid transporting 9A (putative) 2 2
MIRT671525 SEPT3 septin 3 2 4
MIRT671846 PDE3A phosphodiesterase 3A 2 2
MIRT675441 LEAP2 liver enriched antimicrobial peptide 2 2 2
MIRT698694 TBL1XR1 transducin beta like 1 X-linked receptor 1 2 2
MIRT700023 RPP25 ribonuclease P and MRP subunit p25 2 2
MIRT700227 REL REL proto-oncogene, NF-kB subunit 2 2
MIRT707380 VCAM1 vascular cell adhesion molecule 1 2 2
MIRT708303 MPPE1 metallophosphoesterase 1 2 2
MIRT708310 CDH8 cadherin 8 2 2
MIRT709297 LDLRAD4 low density lipoprotein receptor class A domain containing 4 2 2
MIRT710969 CMKLR1 chemerin chemokine-like receptor 1 2 2
MIRT711207 SMIM14 small integral membrane protein 14 2 2
MIRT711606 LHX5 LIM homeobox 5 2 2
MIRT712464 KCNC3 potassium voltage-gated channel subfamily C member 3 2 2
MIRT712763 SLC35F2 solute carrier family 35 member F2 2 2
MIRT712838 RHOA ras homolog family member A 2 2
MIRT713259 ZFP30 ZFP30 zinc finger protein 2 2
MIRT713386 NLN neurolysin 2 2
MIRT713548 GJB1 gap junction protein beta 1 2 2
MIRT714532 ZBTB39 zinc finger and BTB domain containing 39 2 2
MIRT714568 GALNT10 polypeptide N-acetylgalactosaminyltransferase 10 2 2
MIRT714608 EXO5 exonuclease 5 2 2
MIRT715130 ACADL acyl-CoA dehydrogenase, long chain 2 2
MIRT715225 NPVF neuropeptide VF precursor 2 2
MIRT715346 VMP1 vacuole membrane protein 1 2 2
MIRT715920 ACVRL1 activin A receptor like type 1 2 2
MIRT716016 TMPRSS5 transmembrane protease, serine 5 2 2
MIRT716670 PPP6R1 protein phosphatase 6 regulatory subunit 1 2 2
MIRT716805 TMEM196 transmembrane protein 196 2 2
MIRT716881 PHF16 jade family PHD finger 3 1 1
MIRT717303 RNF8 ring finger protein 8 2 2
MIRT717470 ZNF292 zinc finger protein 292 2 2
MIRT718048 GPT2 glutamic--pyruvic transaminase 2 2 2
MIRT718139 PALM paralemmin 2 2
MIRT718501 GYS1 glycogen synthase 1 2 2
MIRT718631 DIP2A disco interacting protein 2 homolog A 2 2
MIRT718719 ANKRD18A ankyrin repeat domain 18A 2 2
MIRT718844 SNX20 sorting nexin 20 2 2
MIRT718909 GALR1 galanin receptor 1 2 2
MIRT718920 TRIM66 tripartite motif containing 66 2 2
MIRT719141 DPYSL5 dihydropyrimidinase like 5 2 2
MIRT719407 B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 2 2
MIRT719552 CBLB Cbl proto-oncogene B 2 2
MIRT719642 AP5M1 adaptor related protein complex 5 mu 1 subunit 2 2
MIRT720186 CMC4 C-X9-C motif containing 4 2 2
MIRT720251 FAM83F family with sequence similarity 83 member F 2 2
MIRT720660 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT720939 PPP1R3E protein phosphatase 1 regulatory subunit 3E 2 2
MIRT721090 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT721137 SNRK SNF related kinase 2 2
MIRT721656 RPL34 ribosomal protein L34 2 2
MIRT721782 ARL6IP4 ADP ribosylation factor like GTPase 6 interacting protein 4 2 2
MIRT721873 RHOH ras homolog family member H 2 2
MIRT722131 TTLL11 tubulin tyrosine ligase like 11 2 2
MIRT722332 PKHD1 PKHD1, fibrocystin/polyductin 2 2
MIRT724319 CGN cingulin 2 2
MIRT724637 PKDREJ polycystin family receptor for egg jelly 2 2
MIRT725276 OSTM1 osteopetrosis associated transmembrane protein 1 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-7110-3p Cisplatin 5460033 NSC119875 approved resistant cell line (A2780)

Error report submission