miRTarBase - #MIRT395059


—
pre-miRNA Information
pre-miRNA hsa-mir-6808   
Genomic Coordinates chr1: 1339650 - 1339708
Description Homo sapiens miR-6808 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-6808-5p
Sequence 6| CAGGCAGGGAGGUGGGACCAUG |27
Evidence Experimental
Experiments Meta-analysis
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs200363718 2 dbSNP
rs781187339 3 dbSNP
rs1175964401 5 dbSNP
rs377360440 9 dbSNP
rs1284899234 12 dbSNP
rs747433206 13 dbSNP
rs1431822851 14 dbSNP
rs1342544357 19 dbSNP
rs751585831 20 dbSNP
rs763913520 21 dbSNP
rs755106743 22 dbSNP
Putative Targets

Gene Information
Gene Symbol TNFAIP2   
Synonyms B94, EXOC3L3
Description TNF alpha induced protein 2
Transcript NM_006291   
Expression
Putative miRNA Targets on TNFAIP2
3'UTR of TNFAIP2
(miRNA target sites are highlighted)		 
>TNFAIP2|NM_006291|3'UTR
   1 CTTTTCCTGTGGCCTGACCTGCCTGTGAGTGCCCAGCAAGCCTTGGGCACACCCCGCTGGGAGCTGTTAAGAGCAGCGCT
  81 GGTTCTCGGTTCCTCCCGGGTCTCCTGTGCTCTGATGCTACTTCTGCCTAGCCCTGGCGGAGGTGCAGGCCCTGTCAGCT
 161 GGAACTGGACAGACCTTGGTTTGTTTACATGTCCGATGGGGGCAGGAGCTCCCATCCTGGGCAGCCAACCAGGCAACACC
 241 AAGGACTCTTTGTAAACGATAGCTGATCGTGTGCACGCAAGGAAAGAACCAGGAGGGAGAGTGCAGCCAGGCTCAGGGAT
 321 CCCCGGACACCTCTGTCCAGAGCCCCTCCACAGTCGGCCTCATGACTGTCCTCCTCGTGGGTGGGGCCGAGGGCCCTCTT
 401 CAGCTCTCTGGAGACAGGGGCCGAGCCTCACCCATCTGCCCTCTGCAGCCCAGGGCCGCCGTGAGCGGGATTCAGCAATG
 481 GTGGAATGGAAGACAGAACTGGAAGAGAAAGAAGGAAAAGATGAGCTCTCGTCTGGCAGGGGCTTTTAGGGTCCTGTGGC
 561 GAGCTGTGAGCACCGCCAGCATTAGACGTCACATCCAGGTGGCCCCACGGCCCCTACAGGCTGGCCCTGCAATGGGGCCC
 641 TGAGCCCTCCCTCTTCATCCCCCAAGGCCTCAACTAGAGGGTGGTCCCCCGAGGGCTTGGTGTCTACTACCGAAGGGCCC
 721 AAGACCTCCTGGGTCCTCTCAGGCTCCCCCTTCCCCAAGGCAGGGACAGGCCCTGGGGGTGCCACCGTGGGCCCTGCCAC
 801 CCAGAAGTCTGGCTGAGGTCTGGGCAGGGGCAGGGCAAGCTTGACCTCTCACTGTTGACCCTTTGGCCTCTGTATTTGTT
 881 TCCTATTGCCGTGACAGGTTTCCACAAACTTCGTGGATCAAAACGAGGTCTTCCAGTTCTGCGGGTCAGAAGGCTGACCC
 961 GGGGCTCAAATCTGGGTGTCGGCAGTCCTGCACTCCTTCTGGAGGCTCTAGGGGAGAATTCATTTCTGGCCTTTTCATTT
1041 TTAGAGGCTGACCGTAATTCTTGACTTCAGGCTCCTCCATCTTCAGAGCCAGCTGTGGGTAGTTGAATCTTTTTCCCGTC
1121 ACCTCATTGAGGCCTCCCCTCTCCTGCCTCCCTCCACCACTTTTTTTTTTTTTTTTTTGAGACAGGGTCTTGCTGTGTTG
1201 CCCAGGCTGGAGTGCAGTGGCCTGGTCATGGCATCAAGGCTCACTGCAGCCTGGACCTCCTGGTTCAAGTGATCCTCTTG
1281 TCTCAGTCCCCTGAGACAATCCCCCACGCCCAGCTACATATTTTTTGTGGATACAGGGTCTCATTCTGTTGCCTAGGCTT
1361 GTCTGGAACTCCTGGGCTCAAGGGATCTTGTAGCCTTAGCCTCCTAAAGTGCTGGGATTATAGGCATGAGTCACTGTACC
1441 CGGCCTGCTCTACCGCTTTTAAGGACGCTTATGATCACATTGCGCCTACCCAGAGAACCCAGGTCGTCTTTCTATTTTCA
1521 GGTCAGCTGATTAGCCACCTTAGTTCCATCTGCAACTTTAGTTCCCACTGGCTGTGTAACCTAACATAGTCACAGGCTCT
1601 GGGGACTGTCACGTGGACATCTTTGGGAGGCCGTTATTCTGCCCACCGCACCCTCCGTTCATCCCCTGCCCTGCCGGGCA
1681 CCTCGCTCTACCCCAGGAAAATGTGAGCTCGTTTTCCTGCTCGGCATGTGCTCCCCCTAAGGCTCTGCTCCTCCCTGGGC
1761 CTGAAAGTTCCTTCTCAGCCTGAGAGGGGGCCCTTCGGACTCAGGCATGACTCAGCCCGGCTGATGCCTCTGCAGTGCTG
1841 AGTCAGGATTTGGGGCCGGCTCTCTTGGGTCCGTCCCCTTTTCCCAGGTACTGCCTTACAAAGCTGTGGCCAGGAAGTGG
1921 CCGGTATAAAGGATGCCCAAGGTCTTTGTACGTGTGTAGGAGTTAGCGTGTTTGATATTGTTAATATAATAATAATTATT
2001 TTTTAGAGTACTGCTTTTGTATGTATGTTGAACAGGATCCAGGTTTTTATAGCTTGATATAAAACAGAATTCAAAAGTGA
2081 AAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' guaCCAGGGUGGAG-GGACGGAc 5'
             || |:| |||| ||||||| 
Target 5' tgaGGCCTCCCCTCTCCTGCCTc 3'
 1128 - 1150 167.00 -24.70
2 
miRNA  3' guaccAGGG---UGGA-GGGACGGAc 5'
               |||:   :|||  ||||||| 
Target 5' -ctttTCCTGTGGCCTGACCTGCCTg 3'
 1 - 25 149.00 -22.00
3 
miRNA  3' guaCCAGGGUGG-A---GGGACGGac 5'
             ||| ||||| |   |||||||  
Target 5' gggGGTGCCACCGTGGGCCCTGCCac 3'
 775 - 800 147.00 -28.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN24313476 7 COSMIC
COSN31533361 24 COSMIC
COSN31596811 51 COSMIC
COSN30469991 93 COSMIC
COSN31487747 115 COSMIC
COSN1164564 118 COSMIC
COSN24716519 171 COSMIC
COSN30494761 181 COSMIC
COSN30713160 390 COSMIC
COSM8506919 462 COSMIC
COSM4147837 515 COSMIC
COSM9375929 516 COSMIC
COSM1629213 578 COSMIC
COSM3765720 582 COSMIC
COSM5458443 611 COSMIC
COSN7429323 1546 COSMIC
COSN16804734 1986 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs763826932 7 dbSNP
rs751441143 13 dbSNP
rs1234730804 14 dbSNP
rs138648854 15 dbSNP
rs1045944652 16 dbSNP
rs1474947892 17 dbSNP
rs781237530 18 dbSNP
rs577519621 19 dbSNP
rs1239847007 21 dbSNP
rs756004828 23 dbSNP
rs778963588 25 dbSNP
rs748164347 36 dbSNP
rs1435013160 38 dbSNP
rs772001488 40 dbSNP
rs772335970 42 dbSNP
rs773300209 44 dbSNP
rs747458475 47 dbSNP
rs1173437331 48 dbSNP
rs1392754332 51 dbSNP
rs924645179 55 dbSNP
rs2227304 56 dbSNP
rs539247291 57 dbSNP
rs1218861943 60 dbSNP
rs912683368 70 dbSNP
rs893224875 72 dbSNP
rs544560592 74 dbSNP
rs754325121 78 dbSNP
rs1286251655 83 dbSNP
rs556442685 88 dbSNP
rs996906776 89 dbSNP
rs575795078 98 dbSNP
rs888951686 99 dbSNP
rs1009250672 103 dbSNP
rs1409261153 110 dbSNP
rs1176609348 114 dbSNP
rs1394080220 121 dbSNP
rs1236264224 128 dbSNP
rs538358917 131 dbSNP
rs1018858861 132 dbSNP
rs961925053 140 dbSNP
rs1166758473 143 dbSNP
rs993167889 149 dbSNP
rs1027292601 154 dbSNP
rs1416713254 154 dbSNP
rs1185220936 155 dbSNP
rs951922673 162 dbSNP
rs1384332209 170 dbSNP
rs1232909053 174 dbSNP
rs1043319572 176 dbSNP
rs1436518989 180 dbSNP
rs906109135 190 dbSNP
rs554975086 195 dbSNP
rs1356418416 196 dbSNP
rs757680261 200 dbSNP
rs1001743559 201 dbSNP
rs1278969533 202 dbSNP
rs1036275375 203 dbSNP
rs1298148886 207 dbSNP
rs1327752034 209 dbSNP
rs765517148 222 dbSNP
rs1162383906 228 dbSNP
rs1402011518 232 dbSNP
rs971577160 238 dbSNP
rs1157467543 240 dbSNP
rs1469112609 243 dbSNP
rs895943217 244 dbSNP
rs981547179 248 dbSNP
rs1468338252 249 dbSNP
rs1251481415 250 dbSNP
rs1210828255 258 dbSNP
rs1447744877 261 dbSNP
rs750733617 269 dbSNP
rs758564740 270 dbSNP
rs780275892 277 dbSNP
rs571054343 278 dbSNP
rs1382416667 283 dbSNP
rs914569848 284 dbSNP
rs963067918 291 dbSNP
rs973046504 301 dbSNP
rs1323574797 307 dbSNP
rs932767425 308 dbSNP
rs367611808 310 dbSNP
rs115471053 312 dbSNP
rs1317068165 318 dbSNP
rs1307622999 325 dbSNP
rs953268790 346 dbSNP
rs1174852107 348 dbSNP
rs1454168899 356 dbSNP
rs987372888 357 dbSNP
rs560615621 359 dbSNP
rs911718141 362 dbSNP
rs935157293 367 dbSNP
rs1241715082 369 dbSNP
rs888974985 369 dbSNP
rs577514811 374 dbSNP
rs747087875 377 dbSNP
rs1008742465 378 dbSNP
rs1281039592 381 dbSNP
rs1040205720 383 dbSNP
rs1347041245 386 dbSNP
rs1242309103 389 dbSNP
rs1301064311 390 dbSNP
rs1216074127 391 dbSNP
rs546056272 394 dbSNP
rs1269253890 395 dbSNP
rs1461190314 400 dbSNP
rs1292617228 404 dbSNP
rs185122766 409 dbSNP
rs1027364865 410 dbSNP
rs1376749102 411 dbSNP
rs1043029666 412 dbSNP
rs887435028 415 dbSNP
rs1434709567 416 dbSNP
rs780147145 416 dbSNP
rs905836558 416 dbSNP
rs1358471836 417 dbSNP
rs1339266354 419 dbSNP
rs1219237980 420 dbSNP
rs1013110069 423 dbSNP
rs190276178 424 dbSNP
rs1476274448 430 dbSNP
rs1220509742 435 dbSNP
rs1258384446 436 dbSNP
rs777906879 436 dbSNP
rs1187302818 452 dbSNP
rs895985268 458 dbSNP
rs1184970495 459 dbSNP
rs1261212395 460 dbSNP
rs1478154460 461 dbSNP
rs749224433 462 dbSNP
rs771224855 467 dbSNP
rs971531860 468 dbSNP
rs1165985480 469 dbSNP
rs1351950055 473 dbSNP
rs1162222663 474 dbSNP
rs1459179978 479 dbSNP
rs1293451623 481 dbSNP
rs1286739416 485 dbSNP
rs1014705132 491 dbSNP
rs1359366085 493 dbSNP
rs898911801 494 dbSNP
rs770912997 495 dbSNP
rs777018323 506 dbSNP
rs774017650 519 dbSNP
rs1168756592 523 dbSNP
rs1164990374 526 dbSNP
rs1227652384 526 dbSNP
rs1313213270 527 dbSNP
rs547899945 531 dbSNP
rs760129248 532 dbSNP
rs1213926156 539 dbSNP
rs1285494231 542 dbSNP
rs1488675606 543 dbSNP
rs748096598 547 dbSNP
rs1255456903 558 dbSNP
rs561299265 561 dbSNP
rs1182942809 562 dbSNP
rs1416479733 567 dbSNP
rs1417646903 570 dbSNP
rs771641867 571 dbSNP
rs770367297 575 dbSNP
rs544961698 576 dbSNP
rs1273404094 578 dbSNP
rs1299553502 580 dbSNP
rs1373064938 581 dbSNP
rs710100 582 dbSNP
rs41310340 588 dbSNP
rs539757339 589 dbSNP
rs1221818221 591 dbSNP
rs1308830405 598 dbSNP
rs1296849259 603 dbSNP
rs985832929 604 dbSNP
rs1395609525 605 dbSNP
rs761477043 609 dbSNP
rs1164521202 610 dbSNP
rs1242538098 611 dbSNP
rs1278367626 615 dbSNP
rs1311663030 618 dbSNP
rs1460012425 622 dbSNP
rs944062532 623 dbSNP
rs1211450722 625 dbSNP
rs1239660004 627 dbSNP
rs1228640442 628 dbSNP
rs549968035 631 dbSNP
rs1178364728 632 dbSNP
rs1407129156 633 dbSNP
rs1239147271 634 dbSNP
rs978775026 635 dbSNP
rs897662487 636 dbSNP
rs1253319377 637 dbSNP
rs929233779 638 dbSNP
rs1160082593 643 dbSNP
rs1048958834 644 dbSNP
rs1305967964 648 dbSNP
rs1413339099 650 dbSNP
rs750165111 657 dbSNP
rs1360775803 659 dbSNP
rs1212693510 660 dbSNP
rs1487291009 661 dbSNP
rs569888923 663 dbSNP
rs375732188 665 dbSNP
rs779950990 668 dbSNP
rs1057511786 674 dbSNP
rs1307738836 676 dbSNP
rs1237090489 679 dbSNP
rs1372189289 680 dbSNP
rs917488768 681 dbSNP
rs1449349321 682 dbSNP
rs1301446028 687 dbSNP
rs1344409078 688 dbSNP
rs1243102382 690 dbSNP
rs1219850363 691 dbSNP
rs538295545 692 dbSNP
rs1387412104 703 dbSNP
rs1012603967 711 dbSNP
rs555112282 712 dbSNP
rs1436274318 713 dbSNP
rs1036525897 718 dbSNP
rs1422004156 724 dbSNP
rs1455486336 727 dbSNP
rs760230444 729 dbSNP
rs906958361 735 dbSNP
rs994591918 736 dbSNP
rs1223565696 742 dbSNP
rs574919955 746 dbSNP
rs1002568829 751 dbSNP
rs1342818406 755 dbSNP
rs1205304768 757 dbSNP
rs1031840305 766 dbSNP
rs1283179747 768 dbSNP
rs1213661645 773 dbSNP
rs533939412 778 dbSNP
rs1349213646 779 dbSNP
rs554168054 787 dbSNP
rs371280953 788 dbSNP
rs1216247583 801 dbSNP
rs1296594212 825 dbSNP
rs577450827 830 dbSNP
rs1358713547 831 dbSNP
rs954415725 838 dbSNP
rs1490873150 841 dbSNP
rs1200270215 846 dbSNP
rs1375956429 854 dbSNP
rs1172833702 860 dbSNP
rs985478999 861 dbSNP
rs1464375191 862 dbSNP
rs370106065 862 dbSNP
rs546102472 863 dbSNP
rs1160734347 869 dbSNP
rs1409263828 871 dbSNP
rs1009403526 891 dbSNP
rs1189443486 892 dbSNP
rs1419471260 896 dbSNP
rs944144339 898 dbSNP
rs1156508181 904 dbSNP
rs1367015416 905 dbSNP
rs562712907 911 dbSNP
rs919123206 913 dbSNP
rs929137274 914 dbSNP
rs752906194 917 dbSNP
rs140333463 919 dbSNP
rs1295240435 920 dbSNP
rs958981619 920 dbSNP
rs992838745 925 dbSNP
rs763584962 926 dbSNP
rs1412619066 928 dbSNP
rs1237652749 929 dbSNP
rs1293625256 931 dbSNP
rs917522886 943 dbSNP
rs8176400 944 dbSNP
rs1223435483 948 dbSNP
rs1132350 961 dbSNP
rs868047438 962 dbSNP
rs930770432 968 dbSNP
rs906874180 971 dbSNP
rs1440043585 973 dbSNP
rs1050203587 978 dbSNP
rs376449631 981 dbSNP
rs369637570 982 dbSNP
rs1177187827 983 dbSNP
rs1275306354 984 dbSNP
rs1052789514 993 dbSNP
rs1334261977 994 dbSNP
rs891515642 1001 dbSNP
rs765717795 1009 dbSNP
rs1445810179 1013 dbSNP
rs892085137 1015 dbSNP
rs1424915168 1022 dbSNP
rs750777207 1023 dbSNP
rs1445747743 1039 dbSNP
rs1397791660 1048 dbSNP
rs1162209064 1050 dbSNP
rs1022171049 1051 dbSNP
rs1388030471 1054 dbSNP
rs527427138 1055 dbSNP
rs758747807 1070 dbSNP
rs766548447 1071 dbSNP
rs1019637945 1073 dbSNP
rs1471462650 1075 dbSNP
rs1364854108 1082 dbSNP
rs967881472 1086 dbSNP
rs187141897 1087 dbSNP
rs1255210208 1089 dbSNP
rs1214568421 1093 dbSNP
rs1468193161 1094 dbSNP
rs1001974671 1105 dbSNP
rs1376108379 1107 dbSNP
rs965360952 1112 dbSNP
rs1352812118 1113 dbSNP
rs78199212 1118 dbSNP
rs1239291040 1119 dbSNP
rs1316913044 1123 dbSNP
rs1383172335 1127 dbSNP
rs1374396636 1139 dbSNP
rs1245890102 1149 dbSNP
rs1265075193 1156 dbSNP
rs923274029 1157 dbSNP
rs1354399597 1159 dbSNP
rs878861862 1160 dbSNP
rs958808300 1160 dbSNP
rs11358000 1161 dbSNP
rs1231776226 1161 dbSNP
rs1384999698 1161 dbSNP
rs746847432 1161 dbSNP
rs763522137 1161 dbSNP
rs767995440 1161 dbSNP
rs879185999 1161 dbSNP
rs918693442 1161 dbSNP
rs1024312924 1162 dbSNP
rs962015822 1168 dbSNP
rs533050802 1173 dbSNP
rs1283570779 1176 dbSNP
rs1197234133 1179 dbSNP
rs1215829998 1179 dbSNP
rs1245357579 1180 dbSNP
rs1445614354 1181 dbSNP
rs1234716778 1184 dbSNP
rs972323392 1186 dbSNP
rs1272746717 1193 dbSNP
rs984649471 1195 dbSNP
rs1366328101 1197 dbSNP
rs1050436869 1212 dbSNP
rs1326519717 1219 dbSNP
rs920835828 1220 dbSNP
rs1476167634 1222 dbSNP
rs1377766614 1226 dbSNP
rs909030411 1231 dbSNP
rs1414283859 1262 dbSNP
rs1423457738 1268 dbSNP
rs1188513534 1275 dbSNP
rs150317393 1285 dbSNP
rs1262647759 1294 dbSNP
rs1464006348 1306 dbSNP
rs1191554606 1308 dbSNP
rs1044686875 1309 dbSNP
rs928331551 1310 dbSNP
rs1311392620 1313 dbSNP
rs372160395 1318 dbSNP
rs1216021092 1321 dbSNP
rs529093947 1323 dbSNP
rs944472033 1334 dbSNP
rs532613850 1335 dbSNP
rs1312325319 1336 dbSNP
rs1052693302 1344 dbSNP
rs114497210 1345 dbSNP
rs1011706772 1349 dbSNP
rs1447860435 1373 dbSNP
rs376038965 1374 dbSNP
rs1172977395 1388 dbSNP
rs1278929308 1397 dbSNP
rs138006192 1407 dbSNP
rs1043647177 1410 dbSNP
rs1476244253 1414 dbSNP
rs1258228297 1417 dbSNP
rs889934298 1421 dbSNP
rs1007174362 1422 dbSNP
rs1019893122 1427 dbSNP
rs191693080 1436 dbSNP
rs994171595 1437 dbSNP
rs553844806 1442 dbSNP
rs149454606 1443 dbSNP
rs896270335 1443 dbSNP
rs748167531 1451 dbSNP
rs1483811235 1453 dbSNP
rs1200272283 1455 dbSNP
rs569491571 1456 dbSNP
rs539695634 1464 dbSNP
rs962067918 1467 dbSNP
rs1422379146 1468 dbSNP
rs368847260 1469 dbSNP
rs1399969619 1473 dbSNP
rs1329564275 1484 dbSNP
rs928572616 1485 dbSNP
rs938560081 1492 dbSNP
rs1164165390 1504 dbSNP
rs1423214141 1506 dbSNP
rs1052725611 1507 dbSNP
rs1178830990 1509 dbSNP
rs912890015 1516 dbSNP
rs1465445590 1522 dbSNP
rs986756220 1533 dbSNP
rs910736472 1534 dbSNP
rs752328771 1535 dbSNP
rs944839746 1535 dbSNP
rs1220151624 1542 dbSNP
rs183589125 1551 dbSNP
rs1319348023 1552 dbSNP
rs1309819468 1560 dbSNP
rs975883593 1578 dbSNP
rs947182660 1587 dbSNP
rs945083111 1588 dbSNP
rs576369903 1594 dbSNP
rs1443466100 1605 dbSNP
rs1395453164 1607 dbSNP
rs1293065441 1612 dbSNP
rs1456477053 1613 dbSNP
rs188830207 1614 dbSNP
rs1161209668 1624 dbSNP
rs1379522583 1642 dbSNP
rs1455341037 1643 dbSNP
rs1267633306 1646 dbSNP
rs778858086 1648 dbSNP
rs942881338 1649 dbSNP
rs1041195644 1650 dbSNP
rs770611363 1650 dbSNP
rs1340010751 1651 dbSNP
rs1216850666 1657 dbSNP
rs901433335 1658 dbSNP
rs1353611157 1664 dbSNP
rs555954308 1665 dbSNP
rs994413782 1670 dbSNP
rs1025689001 1672 dbSNP
rs903495058 1674 dbSNP
rs888426082 1676 dbSNP
rs1313320869 1677 dbSNP
rs1233090543 1679 dbSNP
rs1300886194 1683 dbSNP
rs1279902807 1685 dbSNP
rs1005663632 1686 dbSNP
rs896333908 1687 dbSNP
rs1013825394 1689 dbSNP
rs1420307084 1691 dbSNP
rs572013148 1709 dbSNP
rs541143896 1711 dbSNP
rs969473844 1712 dbSNP
rs193223592 1716 dbSNP
rs1261998880 1720 dbSNP
rs1197737306 1723 dbSNP
rs532968203 1724 dbSNP
rs897910947 1726 dbSNP
rs959980631 1734 dbSNP
rs1488278113 1736 dbSNP
rs543486738 1737 dbSNP
rs1268912187 1743 dbSNP
rs1346187026 1747 dbSNP
rs1255719606 1748 dbSNP
rs952000668 1749 dbSNP
rs912930824 1750 dbSNP
rs182219394 1770 dbSNP
rs1278986263 1780 dbSNP
rs115047971 1784 dbSNP
rs1454107699 1786 dbSNP
rs754767395 1791 dbSNP
rs1360098522 1796 dbSNP
rs35877551 1797 dbSNP
rs549185170 1797 dbSNP
rs386780931 1798 dbSNP
rs879381617 1798 dbSNP
rs966441551 1798 dbSNP
rs4283165 1799 dbSNP
rs67171196 1799 dbSNP
rs4369588 1800 dbSNP
rs1368313744 1806 dbSNP
rs930233835 1809 dbSNP
rs1299809864 1816 dbSNP
rs1337956876 1819 dbSNP
rs773736450 1820 dbSNP
rs1477212191 1829 dbSNP
rs1260354712 1843 dbSNP
rs888675354 1844 dbSNP
rs1443474408 1845 dbSNP
rs763274967 1858 dbSNP
rs147129062 1859 dbSNP
rs917809520 1863 dbSNP
rs1005984601 1871 dbSNP
rs34735806 1871 dbSNP
rs879483156 1872 dbSNP
rs8126 1873 dbSNP
rs1052823 1874 dbSNP
rs896958861 1878 dbSNP
rs78754437 1879 dbSNP
rs1035525462 1884 dbSNP
rs1049143650 1894 dbSNP
rs959854219 1895 dbSNP
rs186509335 1900 dbSNP
rs1052852 1904 dbSNP
rs1020640896 1911 dbSNP
rs191255585 1913 dbSNP
rs1402119373 1921 dbSNP
rs17101264 1923 dbSNP
rs1252550745 1924 dbSNP
rs1464733848 1932 dbSNP
rs968626038 1935 dbSNP
rs1166425070 1952 dbSNP
rs978842670 1953 dbSNP
rs1052912 1957 dbSNP
rs964175462 1967 dbSNP
rs767787027 1968 dbSNP
rs1198310850 1969 dbSNP
rs1456588786 1970 dbSNP
rs1803189 1975 dbSNP
rs1275201524 1978 dbSNP
rs1210496802 1986 dbSNP
rs572604690 1986 dbSNP
rs1355660615 1987 dbSNP
rs922794243 1991 dbSNP
rs144061929 1995 dbSNP
rs1047238065 1997 dbSNP
rs1803188 1998 dbSNP
rs1309685188 2008 dbSNP
rs1803187 2024 dbSNP
rs1457454856 2025 dbSNP
rs184165585 2043 dbSNP
rs756175446 2045 dbSNP
rs1405454773 2048 dbSNP
rs1389299179 2060 dbSNP
rs1162006768 2066 dbSNP
rs966826119 2068 dbSNP
rs979164178 2080 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions LCL-BACD1 , LCL-BACD3
Disease MIMAT0027516
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... "PAR-CLIP data was present in GSM1020024. RNA binding protein: AGO2. Condition:EBV B95-8-infected "PAR-CLIP data was present in GSM1020025. RNA binding protein: AGO2. Condition:EBV B95-8-infected ...

- Skalsky RL; Corcoran DL; Gottwein E; Frank et al., 2012, PLoS pathogens.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' guaccagggUGGA--GGGACGGac 5'
                   :|||  ||||| |  
Target 5' ---------GCCUAGCCCUGGCgg 3'
 		1 - 15
Article - Skalsky RL; Corcoran DL; Gottwein E; Frank et al.
- PLoS pathogens, 2012
Epstein-Barr virus (EBV) is a ubiquitous human herpesvirus linked to a number of B cell cancers and lymphoproliferative disorders. During latent infection, EBV expresses 25 viral pre-microRNAs (miRNAs) and induces the expression of specific host miRNAs, such as miR-155 and miR-21, which potentially play a role in viral oncogenesis. To date, only a limited number of EBV miRNA targets have been identified; thus, the role of EBV miRNAs in viral pathogenesis and/or lymphomagenesis is not well defined. Here, we used photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation (PAR-CLIP) combined with deep sequencing and computational analysis to comprehensively examine the viral and cellular miRNA targetome in EBV strain B95-8-infected lymphoblastoid cell lines (LCLs). We identified 7,827 miRNA-interaction sites in 3,492 cellular 3'UTRs. 531 of these sites contained seed matches to viral miRNAs. 24 PAR-CLIP-identified miRNA:3'UTR interactions were confirmed by reporter assays. Our results reveal that EBV miRNAs predominantly target cellular transcripts during latent infection, thereby manipulating the host environment. Furthermore, targets of EBV miRNAs are involved in multiple cellular processes that are directly relevant to viral infection, including innate immunity, cell survival, and cell proliferation. Finally, we present evidence that myc-regulated host miRNAs from the miR-17/92 cluster can regulate latent viral gene expression. This comprehensive survey of the miRNA targetome in EBV-infected B cells represents a key step towards defining the functions of EBV-encoded miRNAs, and potentially, identifying novel therapeutic targets for EBV-associated malignancies.
LinkOut: [PMID: 22291592]
CLIP-seq Support 1 for dataset GSM1020024
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BACD1 / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000560869.1 | 3UTR | GCCUAGCCCUGGCGGAGG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM1020025
Method / RBP PAR-CLIP / AGO2
Cell line / Condition LCL-BACD3 / EBV B95-8-infected, 4-thiouridine, RNase T1
Location of target site ENST00000560869.1 | 3UTR | GCCUAGCCCUGGCGGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22291592 / GSE41437
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
481 hsa-miR-6808-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT058861 VANGL1 VANGL planar cell polarity protein 1 2 6
MIRT065801 HOXC8 homeobox C8 2 6
MIRT108715 XIAP X-linked inhibitor of apoptosis 2 2
MIRT113314 SMARCD1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 2 2
MIRT129749 AGTRAP angiotensin II receptor associated protein 2 2
MIRT140199 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT166797 PAPD7 poly(A) RNA polymerase D7, non-canonical 2 4
MIRT180260 PRRG4 proline rich and Gla domain 4 2 2
MIRT307008 TGFBR2 transforming growth factor beta receptor 2 2 2
MIRT325577 HIATL1 major facilitator superfamily domain containing 14B 2 4
MIRT370131 TRIB3 tribbles pseudokinase 3 2 2
MIRT370517 ZNRF3 zinc and ring finger 3 2 2
MIRT386083 ZNF609 zinc finger protein 609 2 2
MIRT395059 TNFAIP2 TNF alpha induced protein 2 2 2
MIRT406920 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT443500 MXI1 MAX interactor 1, dimerization protein 2 4
MIRT443532 ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 2 2
MIRT444630 GSPT1 G1 to S phase transition 1 2 2
MIRT446287 C17orf102 chromosome 17 open reading frame 102 2 2
MIRT447170 MFSD8 major facilitator superfamily domain containing 8 2 2
MIRT447914 SLC35E2 solute carrier family 35 member E2 2 2
MIRT448204 B4GALT7 beta-1,4-galactosyltransferase 7 2 4
MIRT451117 RPS19 ribosomal protein S19 2 2
MIRT451467 HSD11B1L hydroxysteroid 11-beta dehydrogenase 1 like 2 2
MIRT451511 ALOX15 arachidonate 15-lipoxygenase 2 2
MIRT452069 ZNF585B zinc finger protein 585B 2 10
MIRT452224 HAVCR1 hepatitis A virus cellular receptor 1 2 6
MIRT452586 ZFP69B ZFP69 zinc finger protein B 2 2
MIRT452643 PCCB propionyl-CoA carboxylase beta subunit 2 2
MIRT452730 AGAP9 ArfGAP with GTPase domain, ankyrin repeat and PH domain 9 2 4
MIRT452745 PTGES3L prostaglandin E synthase 3 like 2 2
MIRT452772 TCEA3 transcription elongation factor A3 2 4
MIRT452836 FAM131B family with sequence similarity 131 member B 2 2
MIRT452875 LAX1 lymphocyte transmembrane adaptor 1 2 2
MIRT452884 PRSS45 protease, serine 45 2 2
MIRT452973 ZNF844 zinc finger protein 844 2 6
MIRT453031 ZNF527 zinc finger protein 527 2 4
MIRT453175 CNOT4 CCR4-NOT transcription complex subunit 4 2 6
MIRT453436 GLG1 golgi glycoprotein 1 2 2
MIRT453613 ZNF557 zinc finger protein 557 2 2
MIRT453714 TBX20 T-box 20 2 2
MIRT453916 GABRR2 gamma-aminobutyric acid type A receptor rho2 subunit 2 2
MIRT453974 ATP13A4 ATPase 13A4 2 6
MIRT454075 SLC35E3 solute carrier family 35 member E3 2 2
MIRT454256 CCDC125 coiled-coil domain containing 125 2 2
MIRT454994 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT455150 TBC1D25 TBC1 domain family member 25 2 2
MIRT455489 NPY4R neuropeptide Y receptor Y4 2 2
MIRT455706 ZMYM1 zinc finger MYM-type containing 1 2 2
MIRT455878 SLC35C2 solute carrier family 35 member C2 2 2
MIRT455954 CYP4A22 cytochrome P450 family 4 subfamily A member 22 2 2
MIRT455978 BCAS4 breast carcinoma amplified sequence 4 2 4
MIRT456220 LIX1L limb and CNS expressed 1 like 2 6
MIRT456241 LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase 2 6
MIRT456283 HRNR hornerin 2 2
MIRT456743 TMEM239 transmembrane protein 239 2 2
MIRT456927 DDA1 DET1 and DDB1 associated 1 2 2
MIRT457005 ZNF669 zinc finger protein 669 2 4
MIRT457149 MXRA7 matrix remodeling associated 7 2 4
MIRT457348 HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 2 2
MIRT457478 SLC35F6 solute carrier family 35 member F6 2 2
MIRT457553 ZC3H6 zinc finger CCCH-type containing 6 2 2
MIRT457752 NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1 2 2
MIRT457990 APAF1 apoptotic peptidase activating factor 1 2 4
MIRT458405 ABCF1 ATP binding cassette subfamily F member 1 2 4
MIRT458468 SNX22 sorting nexin 22 2 6
MIRT458518 GSG2 histone H3 associated protein kinase 2 6
MIRT458564 C10orf71 chromosome 10 open reading frame 71 2 2
MIRT458654 SGPP2 sphingosine-1-phosphate phosphatase 2 2 2
MIRT458753 CES2 carboxylesterase 2 2 2
MIRT458788 ZNF786 zinc finger protein 786 2 2
MIRT458805 CYP8B1 cytochrome P450 family 8 subfamily B member 1 2 2
MIRT458902 PFAS phosphoribosylformylglycinamidine synthase 2 2
MIRT458959 SAMD4B sterile alpha motif domain containing 4B 2 2
MIRT459002 KIAA1551 KIAA1551 2 2
MIRT459109 CYP4A11 cytochrome P450 family 4 subfamily A member 11 2 2
MIRT459333 HAVCR2 hepatitis A virus cellular receptor 2 2 2
MIRT459403 MPLKIP M-phase specific PLK1 interacting protein 2 2
MIRT459557 BTD biotinidase 2 4
MIRT460252 IL17RB interleukin 17 receptor B 2 2
MIRT460369 TXNDC16 thioredoxin domain containing 16 2 4
MIRT460519 SDE2 SDE2 telomere maintenance homolog 2 2
MIRT460707 RNF157 ring finger protein 157 2 2
MIRT460788 VPS37B VPS37B, ESCRT-I subunit 2 2
MIRT460806 VPS33A VPS33A, CORVET/HOPS core subunit 2 2
MIRT460845 EGF epidermal growth factor 2 4
MIRT460951 NOA1 nitric oxide associated 1 2 2
MIRT461017 SYT7 synaptotagmin 7 2 2
MIRT461132 RAB36 RAB36, member RAS oncogene family 2 4
MIRT461215 TIPIN TIMELESS interacting protein 2 2
MIRT461408 SLFN12L schlafen family member 12 like 2 8
MIRT461565 SCO1 SCO1, cytochrome c oxidase assembly protein 2 4
MIRT461829 SNAP23 synaptosome associated protein 23 2 2
MIRT461869 ZNF317 zinc finger protein 317 2 2
MIRT462088 MSANTD2 Myb/SANT DNA binding domain containing 2 2 2
MIRT462219 MLH1 mutL homolog 1 2 2
MIRT462438 GTPBP10 GTP binding protein 10 2 4
MIRT462512 MTFMT mitochondrial methionyl-tRNA formyltransferase 2 8
MIRT462542 PLLP plasmolipin 2 4
MIRT462895 ZSCAN29 zinc finger and SCAN domain containing 29 2 4
MIRT462975 ZNF788 zinc finger family member 788 2 2
MIRT463079 ZNF639 zinc finger protein 639 2 4
MIRT463905 WNT7B Wnt family member 7B 2 2
MIRT464126 VPS35 VPS35, retromer complex component 2 2
MIRT464835 UBE2B ubiquitin conjugating enzyme E2 B 2 2
MIRT465532 PRICKLE4 prickle planar cell polarity protein 4 2 2
MIRT465586 TNRC6B trinucleotide repeat containing 6B 2 4
MIRT466097 TMEM184C transmembrane protein 184C 2 2
MIRT466220 TMED10 transmembrane p24 trafficking protein 10 2 2
MIRT466696 TAF13 TATA-box binding protein associated factor 13 2 4
MIRT467019 SSBP2 single stranded DNA binding protein 2 2 4
MIRT467261 SPPL2A signal peptide peptidase like 2A 2 2
MIRT467760 SLC35F1 solute carrier family 35 member F1 2 4
MIRT469015 RNF41 ring finger protein 41 2 2
MIRT469071 RNF20 ring finger protein 20 2 2
MIRT469582 RARA retinoic acid receptor alpha 2 2
MIRT471070 PIM2 Pim-2 proto-oncogene, serine/threonine kinase 2 2
MIRT471480 PDE7B phosphodiesterase 7B 2 2
MIRT471653 PANK2 pantothenate kinase 2 2 4
MIRT471852 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT472327 NF2 neurofibromin 2 2 2
MIRT472838 MTMR10 myotubularin related protein 10 2 4
MIRT473058 MORN4 MORN repeat containing 4 2 6
MIRT473119 MLXIP MLX interacting protein 2 2
MIRT474187 LETMD1 LETM1 domain containing 1 2 2
MIRT474373 KLLN killin, p53-regulated DNA replication inhibitor 2 6
MIRT474445 KLHL18 kelch like family member 18 2 6
MIRT474624 KLF2 Kruppel like factor 2 2 4
MIRT474892 KCTD5 potassium channel tetramerization domain containing 5 2 2
MIRT475293 TOR1AIP2 torsin 1A interacting protein 2 2 2
MIRT475404 ICMT isoprenylcysteine carboxyl methyltransferase 2 4
MIRT475691 HHIPL1 HHIP like 1 2 2
MIRT476416 GDE1 glycerophosphodiester phosphodiesterase 1 2 8
MIRT476811 FNDC3B fibronectin type III domain containing 3B 2 2
MIRT477083 FAM208A family with sequence similarity 208 member A 2 6
MIRT477654 EFNA1 ephrin A1 2 2
MIRT478232 DDX52 DExD-box helicase 52 2 2
MIRT478491 CYP20A1 cytochrome P450 family 20 subfamily A member 1 2 2
MIRT478762 CS citrate synthase 2 2
MIRT478822 CRTAP cartilage associated protein 2 2
MIRT479204 CLCN5 chloride voltage-gated channel 5 2 6
MIRT479306 CFL2 cofilin 2 2 2
MIRT479922 CCDC117 coiled-coil domain containing 117 2 6
MIRT480237 C9orf41 carnosine N-methyltransferase 1 2 2
MIRT480361 C5orf24 chromosome 5 open reading frame 24 2 2
MIRT480736 BPTF bromodomain PHD finger transcription factor 2 2
MIRT481074 B4GALT1 beta-1,4-galactosyltransferase 1 2 2
MIRT481104 B3GALNT2 beta-1,3-N-acetylgalactosaminyltransferase 2 2 2
MIRT481272 ATXN7L3 ataxin 7 like 3 2 2
MIRT481438 ASB6 ankyrin repeat and SOCS box containing 6 2 2
MIRT481577 ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 2 2
MIRT481625 ARHGAP1 Rho GTPase activating protein 1 2 2
MIRT482263 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT482380 AEN apoptosis enhancing nuclease 2 2
MIRT486076 ARPP19 cAMP regulated phosphoprotein 19 2 4
MIRT486947 DTX2 deltex E3 ubiquitin ligase 2 2 2
MIRT487274 CCNF cyclin F 2 2
MIRT487360 PHF15 jade family PHD finger 2 1 1
MIRT487471 ANKRD42 ankyrin repeat domain 42 2 2
MIRT487532 GXYLT2 glucoside xylosyltransferase 2 2 4
MIRT487975 IQSEC2 IQ motif and Sec7 domain 2 2 2
MIRT489048 PRPF4B pre-mRNA processing factor 4B 2 2
MIRT489071 STARD3 StAR related lipid transfer domain containing 3 2 2
MIRT489725 CALML3 calmodulin like 3 2 2
MIRT490849 ADD2 adducin 2 2 2
MIRT491851 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT492643 PLXNA1 plexin A1 2 2
MIRT492696 PHYHIP phytanoyl-CoA 2-hydroxylase interacting protein 2 2
MIRT495462 PNMAL2 paraneoplastic Ma antigen family member 8B 2 2
MIRT495494 VTI1B vesicle transport through interaction with t-SNAREs 1B 2 2
MIRT495729 AGO1 argonaute 1, RISC catalytic component 2 2
MIRT495775 ZNF546 zinc finger protein 546 2 4
MIRT495807 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT495827 TMEM151A transmembrane protein 151A 2 2
MIRT496079 ATP1B4 ATPase Na+/K+ transporting family member beta 4 2 4
MIRT496103 SNX17 sorting nexin 17 2 2
MIRT496140 RBL1 RB transcriptional corepressor like 1 2 2
MIRT496182 TRIM73 tripartite motif containing 73 2 2
MIRT496236 TRIM74 tripartite motif containing 74 2 2
MIRT496265 SHROOM2 shroom family member 2 2 2
MIRT496280 SLC2A13 solute carrier family 2 member 13 2 2
MIRT496292 BAZ2A bromodomain adjacent to zinc finger domain 2A 2 2
MIRT496500 MAST3 microtubule associated serine/threonine kinase 3 2 2
MIRT496545 EBI3 Epstein-Barr virus induced 3 2 2
MIRT496706 TRIM39 tripartite motif containing 39 2 2
MIRT496799 BTRC beta-transducin repeat containing E3 ubiquitin protein ligase 2 2
MIRT498685 SERPINH1 serpin family H member 1 2 2
MIRT498742 SNTN sentan, cilia apical structure protein 2 6
MIRT500560 XBP1P1 X-box binding protein 1 pseudogene 1 2 8
MIRT503041 CAMSAP2 calmodulin regulated spectrin associated protein family member 2 2 2
MIRT503438 SLC25A45 solute carrier family 25 member 45 2 6
MIRT507273 FERMT2 fermitin family member 2 2 2
MIRT507345 FAM168A family with sequence similarity 168 member A 2 2
MIRT507970 BCL2L13 BCL2 like 13 2 4
MIRT508613 IRAK4 interleukin 1 receptor associated kinase 4 2 6
MIRT508905 PTPLB 3-hydroxyacyl-CoA dehydratase 2 1 1
MIRT510122 IRAK3 interleukin 1 receptor associated kinase 3 2 8
MIRT510471 ZDHHC18 zinc finger DHHC-type containing 18 2 2
MIRT512944 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 4
MIRT514159 TMEM145 transmembrane protein 145 2 4
MIRT514202 PGPEP1 pyroglutamyl-peptidase I 2 4
MIRT517228 PRIM1 DNA primase subunit 1 2 4
MIRT517484 PEX26 peroxisomal biogenesis factor 26 2 2
MIRT517984 DSCR3 DSCR3 arrestin fold containing 2 2
MIRT518736 ABCG8 ATP binding cassette subfamily G member 8 2 2
MIRT518912 CDC14B cell division cycle 14B 2 2
MIRT520057 YIPF4 Yip1 domain family member 4 2 6
MIRT524625 C7orf73 short transmembrane mitochondrial protein 1 2 2
MIRT524889 ARHGAP11A Rho GTPase activating protein 11A 2 4
MIRT529054 CDK18 cyclin dependent kinase 18 2 2
MIRT531311 GPR26 G protein-coupled receptor 26 2 2
MIRT533554 TPM4 tropomyosin 4 2 2
MIRT534864 RAB15 RAB15, member RAS oncogene family 2 4
MIRT541073 SENP5 SUMO1/sentrin specific peptidase 5 2 2
MIRT544171 HEYL hes related family bHLH transcription factor with YRPW motif-like 2 2
MIRT547847 IGF1R insulin like growth factor 1 receptor 2 2
MIRT548044 GOLIM4 golgi integral membrane protein 4 2 2
MIRT550431 ORC4 origin recognition complex subunit 4 2 2
MIRT550586 SLC2A5 solute carrier family 2 member 5 2 2
MIRT550602 CBY3 chibby family member 3 2 2
MIRT550993 RBM38 RNA binding motif protein 38 2 2
MIRT551343 MRE11A MRE11 homolog, double strand break repair nuclease 2 2
MIRT551376 EPM2AIP1 EPM2A interacting protein 1 2 2
MIRT551399 MRI1 methylthioribose-1-phosphate isomerase 1 2 4
MIRT551594 HDGFRP2 HDGF like 2 2 2
MIRT553095 UBXN2A UBX domain protein 2A 2 4
MIRT554232 SLC17A5 solute carrier family 17 member 5 2 2
MIRT555407 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT557317 HIF1A hypoxia inducible factor 1 alpha subunit 2 2
MIRT559321 ATXN1 ataxin 1 2 2
MIRT559663 AHCYL2 adenosylhomocysteinase like 2 2 2
MIRT562322 G3BP1 G3BP stress granule assembly factor 1 2 2
MIRT563670 SMC4 structural maintenance of chromosomes 4 2 2
MIRT565907 SCAMP2 secretory carrier membrane protein 2 2 2
MIRT569838 SOX11 SRY-box 11 2 2
MIRT570250 CPNE5 copine 5 2 2
MIRT575575 Cd99 CD99 antigen 2 2
MIRT608281 NOP14 NOP14 nucleolar protein 2 2
MIRT610868 ARSA arylsulfatase A 2 2
MIRT614145 THAP1 THAP domain containing 1 2 6
MIRT614602 IRF2BPL interferon regulatory factor 2 binding protein like 2 2
MIRT615239 BROX BRO1 domain and CAAX motif containing 2 2
MIRT617433 ANP32E acidic nuclear phosphoprotein 32 family member E 2 4
MIRT618182 ZNF681 zinc finger protein 681 2 4
MIRT618886 MBL2 mannose binding lectin 2 2 2
MIRT618988 MRPS16 mitochondrial ribosomal protein S16 2 2
MIRT619200 SLC16A4 solute carrier family 16 member 4 2 2
MIRT620327 AQP6 aquaporin 6 2 2
MIRT620461 CENPN centromere protein N 2 2
MIRT621654 UBXN2B UBX domain protein 2B 2 2
MIRT622826 PGAM5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase 2 4
MIRT623364 LZIC leucine zipper and CTNNBIP1 domain containing 2 2
MIRT624934 FBXW2 F-box and WD repeat domain containing 2 2 2
MIRT624990 ZNF665 zinc finger protein 665 2 4
MIRT625501 SMAD9 SMAD family member 9 2 2
MIRT625603 KLHL23 kelch like family member 23 2 2
MIRT625672 C2orf48 chromosome 2 open reading frame 48 2 2
MIRT625892 INADL PATJ, crumbs cell polarity complex component 2 2
MIRT626242 ZNF749 zinc finger protein 749 2 2
MIRT626635 SLC30A6 solute carrier family 30 member 6 2 2
MIRT626998 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT627472 STX7 syntaxin 7 2 2
MIRT627686 RPL28 ribosomal protein L28 2 2
MIRT627902 OLFML2A olfactomedin like 2A 2 2
MIRT627992 NDRG3 NDRG family member 3 2 2
MIRT628328 CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 2 2
MIRT628349 CCDC68 coiled-coil domain containing 68 2 2
MIRT630198 TLN1 talin 1 2 2
MIRT631961 CDKAL1 CDK5 regulatory subunit associated protein 1 like 1 2 4
MIRT633402 FBXW8 F-box and WD repeat domain containing 8 2 2
MIRT633844 WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules 2 2
MIRT635393 NHLRC2 NHL repeat containing 2 2 2
MIRT635807 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT636374 OGFRL1 opioid growth factor receptor like 1 2 2
MIRT638671 GGCX gamma-glutamyl carboxylase 2 2
MIRT639200 TRAPPC2 trafficking protein particle complex 2 2 2
MIRT639603 CD3EAP CD3e molecule associated protein 2 2
MIRT639684 PPEF2 protein phosphatase with EF-hand domain 2 2 6
MIRT642237 RABAC1 Rab acceptor 1 2 2
MIRT642381 ZNF581 zinc finger protein 581 2 2
MIRT645778 RAB3B RAB3B, member RAS oncogene family 2 2
MIRT647078 BRIX1 BRX1, biogenesis of ribosomes 2 4
MIRT647329 RPH3AL rabphilin 3A like (without C2 domains) 2 2
MIRT649010 MRPL49 mitochondrial ribosomal protein L49 2 2
MIRT650461 ZNF141 zinc finger protein 141 2 2
MIRT650537 CCDC77 coiled-coil domain containing 77 2 4
MIRT651002 ZNF770 zinc finger protein 770 2 2
MIRT651749 VEGFB vascular endothelial growth factor B 2 2
MIRT655737 NRXN3 neurexin 3 2 2
MIRT657580 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT658636 ENAH ENAH, actin regulator 2 2
MIRT659824 CASP16 caspase 16, pseudogene 2 2
MIRT660479 ARSK arylsulfatase family member K 2 2
MIRT661146 ZNF43 zinc finger protein 43 2 2
MIRT661205 MPPE1 metallophosphoesterase 1 2 2
MIRT661440 MANSC1 MANSC domain containing 1 2 2
MIRT661553 ZNF674 zinc finger protein 674 2 4
MIRT661687 ZNF623 zinc finger protein 623 2 2
MIRT661812 NUP85 nucleoporin 85 2 2
MIRT661865 ZNF766 zinc finger protein 766 2 2
MIRT662142 ZC3H8 zinc finger CCCH-type containing 8 2 2
MIRT662295 SLC29A4 solute carrier family 29 member 4 2 2
MIRT662519 ANGPT4 angiopoietin 4 2 2
MIRT662720 C10orf111 chromosome 10 open reading frame 111 2 4
MIRT662838 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT662894 PCDHA6 protocadherin alpha 6 2 2
MIRT663007 TMEM59 transmembrane protein 59 2 2
MIRT663247 MPHOSPH8 M-phase phosphoprotein 8 2 2
MIRT663432 ZNF607 zinc finger protein 607 2 2
MIRT663714 ABHD17B abhydrolase domain containing 17B 2 2
MIRT663837 AGBL5 ATP/GTP binding protein like 5 2 4
MIRT663873 MUC20 mucin 20, cell surface associated 2 2
MIRT664271 NMUR1 neuromedin U receptor 1 2 2
MIRT664853 HUS1 HUS1 checkpoint clamp component 2 2
MIRT664948 CARD6 caspase recruitment domain family member 6 2 4
MIRT665519 UTP15 UTP15, small subunit processome component 2 2
MIRT665652 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT665672 TRAF1 TNF receptor associated factor 1 2 2
MIRT665697 TNPO3 transportin 3 2 2
MIRT665854 TIAL1 TIA1 cytotoxic granule associated RNA binding protein like 1 2 2
MIRT665944 TBC1D19 TBC1 domain family member 19 2 4
MIRT666009 SYNJ2BP synaptojanin 2 binding protein 2 2
MIRT666110 SSR1 signal sequence receptor subunit 1 2 2
MIRT666176 SNX27 sorting nexin family member 27 2 4
MIRT666377 SHOX short stature homeobox 2 2
MIRT667008 PDPN podoplanin 2 4
MIRT667189 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT667608 LIPC lipase C, hepatic type 2 2
MIRT667832 IRGQ immunity related GTPase Q 2 2
MIRT667866 IPCEF1 interaction protein for cytohesin exchange factors 1 2 2
MIRT668300 FOSL2 FOS like 2, AP-1 transcription factor subunit 2 4
MIRT668584 ELMSAN1 ELM2 and Myb/SANT domain containing 1 2 4
MIRT669016 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT669107 CDK19 cyclin dependent kinase 19 2 2
MIRT670077 ZNF783 zinc finger family member 783 2 2
MIRT670968 UGGT1 UDP-glucose glycoprotein glucosyltransferase 1 2 4
MIRT671199 ZNF891 zinc finger protein 891 2 2
MIRT671414 ERCC6L2 ERCC excision repair 6 like 2 2 2
MIRT671750 ZNF451 zinc finger protein 451 2 2
MIRT672051 SMTNL2 smoothelin like 2 2 2
MIRT672589 RNF24 ring finger protein 24 2 2
MIRT673456 ZNF583 zinc finger protein 583 2 2
MIRT673921 DCTN6 dynactin subunit 6 2 2
MIRT673956 ZNF500 zinc finger protein 500 2 2
MIRT674171 BLOC1S3 biogenesis of lysosomal organelles complex 1 subunit 3 2 2
MIRT674210 FUT2 fucosyltransferase 2 2 2
MIRT674691 PLCE1 phospholipase C epsilon 1 2 2
MIRT675251 MAK male germ cell associated kinase 2 2
MIRT675365 KLHL26 kelch like family member 26 2 2
MIRT676016 CRKL CRK like proto-oncogene, adaptor protein 2 2
MIRT678297 PTRH2 peptidyl-tRNA hydrolase 2 2 2
MIRT680264 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT680944 EVC EvC ciliary complex subunit 1 2 2
MIRT680968 SLC15A1 solute carrier family 15 member 1 2 4
MIRT681069 PAQR7 progestin and adipoQ receptor family member 7 2 2
MIRT681213 ZNF638 zinc finger protein 638 2 2
MIRT681578 ABHD15 abhydrolase domain containing 15 2 2
MIRT681601 SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 2 2
MIRT681916 SLC11A2 solute carrier family 11 member 2 2 2
MIRT682041 AGXT2 alanine--glyoxylate aminotransferase 2 2 4
MIRT682344 PPP1R15B protein phosphatase 1 regulatory subunit 15B 2 4
MIRT682669 CASP8 caspase 8 2 2
MIRT683287 ZNF99 zinc finger protein 99 2 2
MIRT683363 SCARF1 scavenger receptor class F member 1 2 2
MIRT683457 ACOT2 acyl-CoA thioesterase 2 2 2
MIRT683600 GSTCD glutathione S-transferase C-terminal domain containing 2 2
MIRT683665 ZNF695 zinc finger protein 695 2 2
MIRT683740 EIF3L eukaryotic translation initiation factor 3 subunit L 2 2
MIRT683774 CPE carboxypeptidase E 2 2
MIRT683811 NOTO notochord homeobox 2 2
MIRT684466 MFSD4 major facilitator superfamily domain containing 4A 2 2
MIRT684529 C1orf174 chromosome 1 open reading frame 174 2 2
MIRT684989 MINOS1 mitochondrial inner membrane organizing system 1 2 2
MIRT685016 CXorf56 chromosome X open reading frame 56 2 2
MIRT685119 DTD2 D-tyrosyl-tRNA deacylase 2 (putative) 2 2
MIRT685481 CACNG8 calcium voltage-gated channel auxiliary subunit gamma 8 2 2
MIRT686014 NEK4 NIMA related kinase 4 2 2
MIRT686036 UMPS uridine monophosphate synthetase 2 2
MIRT686563 TPM3 tropomyosin 3 2 2
MIRT686734 TANGO2 transport and golgi organization 2 homolog 2 2
MIRT686970 SFT2D2 SFT2 domain containing 2 2 2
MIRT687291 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT687340 OSBPL2 oxysterol binding protein like 2 2 2
MIRT687558 MLEC malectin 2 2
MIRT687762 KIAA1328 KIAA1328 2 2
MIRT688089 GLUL glutamate-ammonia ligase 2 2
MIRT688605 CYCS cytochrome c, somatic 2 2
MIRT688925 C11orf84 chromosome 11 open reading frame 84 2 2
MIRT689289 C5AR2 complement component 5a receptor 2 2 2
MIRT689446 CYB561 cytochrome b561 2 2
MIRT689559 XPO6 exportin 6 2 2
MIRT690055 C6orf141 chromosome 6 open reading frame 141 2 2
MIRT690208 C5orf45 MRN complex interacting protein 2 2
MIRT690275 CAMLG calcium modulating ligand 2 2
MIRT690335 MRPS30 mitochondrial ribosomal protein S30 2 2
MIRT690530 ZNF566 zinc finger protein 566 2 2
MIRT690585 MICA MHC class I polypeptide-related sequence A 2 2
MIRT690877 PLEKHG2 pleckstrin homology and RhoGEF domain containing G2 2 2
MIRT691162 APOL6 apolipoprotein L6 2 2
MIRT691292 CENPM centromere protein M 2 2
MIRT691768 BCL2L15 BCL2 like 15 2 2
MIRT691786 SLC24A4 solute carrier family 24 member 4 2 2
MIRT691837 TMCO1 transmembrane and coiled-coil domains 1 2 2
MIRT691972 PLCXD1 phosphatidylinositol specific phospholipase C X domain containing 1 2 2
MIRT692051 PAK1IP1 PAK1 interacting protein 1 2 2
MIRT692197 POLR1E RNA polymerase I subunit E 2 2
MIRT692771 NDUFS5 NADH:ubiquinone oxidoreductase subunit S5 2 2
MIRT692863 ZSWIM1 zinc finger SWIM-type containing 1 2 2
MIRT693076 AS3MT arsenite methyltransferase 2 2
MIRT693125 SCNM1 sodium channel modifier 1 2 2
MIRT693182 NPR1 natriuretic peptide receptor 1 2 2
MIRT693518 MOB3A MOB kinase activator 3A 2 2
MIRT693579 PIGR polymeric immunoglobulin receptor 2 2
MIRT693803 RHOG ras homolog family member G 2 2
MIRT694082 RNASEH2B ribonuclease H2 subunit B 2 2
MIRT694167 SLC36A2 solute carrier family 36 member 2 2 2
MIRT694266 RGS9BP regulator of G protein signaling 9 binding protein 2 2
MIRT694560 BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1 2 2
MIRT694783 BVES blood vessel epicardial substance 2 2
MIRT695049 ALG10B ALG10B, alpha-1,2-glucosyltransferase 2 2
MIRT695438 TCF23 transcription factor 23 2 2
MIRT695570 ZNF562 zinc finger protein 562 2 2
MIRT696372 EIF2S3 eukaryotic translation initiation factor 2 subunit gamma 2 2
MIRT696537 C3 complement C3 2 2
MIRT696582 TTC21B tetratricopeptide repeat domain 21B 2 2
MIRT696783 DHODH dihydroorotate dehydrogenase (quinone) 2 2
MIRT697079 PSMC4 proteasome 26S subunit, ATPase 4 2 2
MIRT697108 GPKOW G-patch domain and KOW motifs 2 2
MIRT697464 ZC3H4 zinc finger CCCH-type containing 4 2 2
MIRT697502 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT697634 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT697971 TSPYL1 TSPY like 1 2 2
MIRT698375 TMED4 transmembrane p24 trafficking protein 4 2 2
MIRT698563 TFDP2 transcription factor Dp-2 2 2
MIRT698978 SPAST spastin 2 2
MIRT699051 SOAT1 sterol O-acyltransferase 1 2 2
MIRT699099 SNRPD3 small nuclear ribonucleoprotein D3 polypeptide 2 2
MIRT699494 SLC10A6 solute carrier family 10 member 6 2 2
MIRT699590 SIKE1 suppressor of IKBKE 1 2 2
MIRT699609 SHOC2 SHOC2, leucine rich repeat scaffold protein 2 2
MIRT700156 RNF115 ring finger protein 115 2 2
MIRT700422 QDPR quinoid dihydropteridine reductase 2 2
MIRT700474 PURB purine rich element binding protein B 2 2
MIRT700550 PTBP2 polypyrimidine tract binding protein 2 2 2
MIRT700778 PLA2G4A phospholipase A2 group IVA 2 2
MIRT700879 PER2 period circadian clock 2 2 2
MIRT700956 PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2 2 2
MIRT701176 PACS2 phosphofurin acidic cluster sorting protein 2 2 2
MIRT701285 NUP210 nucleoporin 210 2 2
MIRT701483 NEK9 NIMA related kinase 9 2 2
MIRT701665 MYH9 myosin heavy chain 9 2 2
MIRT701783 MSL2 MSL complex subunit 2 2 2
MIRT701794 MSANTD4 Myb/SANT DNA binding domain containing 4 with coiled-coils 2 2
MIRT702798 IFNAR2 interferon alpha and beta receptor subunit 2 2 2
MIRT703130 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT703257 GNS glucosamine (N-acetyl)-6-sulfatase 2 2
MIRT703400 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT703451 FYTTD1 forty-two-three domain containing 1 2 2
MIRT703661 FAM60A SIN3-HDAC complex associated factor 2 2
MIRT703769 FAM118A family with sequence similarity 118 member A 2 2
MIRT703866 ERN1 endoplasmic reticulum to nucleus signaling 1 2 2
MIRT704668 CLCC1 chloride channel CLIC like 1 2 2
MIRT704816 CDC73 cell division cycle 73 2 2
MIRT704952 CCDC120 coiled-coil domain containing 120 2 2
MIRT705548 ARL10 ADP ribosylation factor like GTPase 10 2 2
MIRT705629 AP1S3 adaptor related protein complex 1 sigma 3 subunit 2 2
MIRT705686 ANKRD40 ankyrin repeat domain 40 2 2
MIRT706242 SYT15 synaptotagmin 15 2 2
MIRT706571 EIF2AK2 eukaryotic translation initiation factor 2 alpha kinase 2 2 2
MIRT706693 COL13A1 collagen type XIII alpha 1 chain 2 2
MIRT708930 RPP14 ribonuclease P/MRP subunit p14 2 2
MIRT708950 FZR1 fizzy and cell division cycle 20 related 1 2 2
MIRT710613 ZNF555 zinc finger protein 555 2 2
MIRT711721 IREB2 iron responsive element binding protein 2 2 2
MIRT713161 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT714471 KLF13 Kruppel like factor 13 2 2
MIRT716875 PTK2B protein tyrosine kinase 2 beta 2 2
MIRT717148 DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding) 2 2
MIRT717995 C9orf171 cilia and flagella associated protein 77 2 2
MIRT724122 PKNOX1 PBX/knotted 1 homeobox 1 2 2
MIRT725317 NLRC5 NLR family CARD domain containing 5 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-6808-5p Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-miR-6808-5p Doxorubicin 31703 NSC123127 approved sensitive cell line (BAS)
hsa-miR-6808-5p Tamoxifen 2733525 NSC180973 approved sensitive cell line (LCC2)

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