miRTarBase - #MIRT395122


—
pre-miRNA Information
pre-miRNA hsa-mir-511   
Genomic Coordinates chr10: 17845107 - 17845193
Description Homo sapiens miR-511 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-511-3p
Sequence 54| AAUGUGUAGCAAAAGACAGA |73
Evidence Experimental
Experiments Illumina
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
COSN30502461 14 COSMIC
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs548691953 3 dbSNP
rs1322530388 4 dbSNP
rs1313209508 11 dbSNP
rs1223031412 19 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol BAHD1   
Synonyms -
Description bromo adjacent homology domain containing 1
Transcript NM_014952   
Expression
Putative miRNA Targets on BAHD1
3'UTR of BAHD1
(miRNA target sites are highlighted)		 
>BAHD1|NM_014952|3'UTR
   1 CCTCCTCATGCCCATGCTGGGGCTACCCATGGGCAAGTGGGGCTCGGGGTAGGGGGCACTGCTTGAAGCACAGCACTTGG
  81 TTAGGGGGCCACAGAGGCCTAAGTTTGCTGGCCTGTGGTTTTCTTGGGGGGGAGGGCAGGGGCCCCTGTGGGTTCTGGGC
 161 TCCAGGGGAGGGAGCTGGGGAGGCCAGGGTATAAGAAAAGCATCAGAACTCTCAGCTTGGCCCAAGGTACCTTCTGTGGT
 241 TCCCCTGGGTGGAGATTTCCGAAAAGTAGTCTTCTCTGAGGCTGGGCCAAGCCTGAGGGAAATGGGGCCCTAGGAGGGTG
 321 GGGGCGGGAAGGAGGGGCAAGGTCTTTCAGGAACCAGACCCAACAGGCCCTTCTGTAGCCTCCCCCTTGCCCTCAAAGGG
 401 GGAGTGGGGGCCAGCTTTACCTCACCCACTGTGACCCGCCGCTTCCCCTTCAGCCTGGGACCAGGCTTTCCTAGATCCCA
 481 GCACAGCTCTGAGCTTGTTCCTTTGAGGCATAGAGAGCCAGAGTCTGGCTTCCAGAGCATTGACTTCCTCTTCCTAGACT
 561 TGAGGCCTTTTCTCTGGCTTTCCTCCTTTGCCCTGCAGTAGCAACTGGTGCTGGGACAAGTTGACCCACCTCTCACAGTC
 641 ATGGGTGTGGCCCACTTGTGGGAGTCTCCTGTCCACCTCCCAGAGACGGCCACCCAGCGGGTCTGGCTTCCCAGAAAGTT
 721 AACTGATGATTGTGGGGTTTGTCATATCTGGGAGGGAAGATGGGTGCTGGGAGAGGGTTGGGGGCAGGGGGCAAGGAAAA
 801 TTGCTACCTGATTTGTTGAAGATTTTTCCTCTTGCCTTACACATGGAGGTTCCAGGAAACCTCTTGCAGAACTTCACACG
 881 TGATTCTTCAAGCCACACCCACCTGAAATCAAACCAAAGGAGTGCTGTGGCTCCCCTTGCCCTGCCACCCTTTCCCTAGT
 961 CTTTTGTAGATTGCACTAATTTACATCCTAGCAAGAATCAACACTGTATCAGTCCACGGACCTGCTGAGCTGCAGCCACT
1041 TGCTCTAGGAGCTAAGGACTTGCATTTTCAGTTTGTTCCTGTTGCCCAGAGGCCCTGTTCTCACCTCATGCTGCTCCCCA
1121 GAGTAGACTAACAGGCTCAGTCCCCTGTTGTCCTTGTGGAGACTAGGCCTTGGCCCTGGCCCTGAGACTCTGTGAGGGGG
1201 CTGGAGCAGCCTGGTTATTTCCTATCTGTACCAAAGAGGAGTATGGTGGGAGAGGGAGTGGAGTGCAGTGTGGCTTGGGC
1281 CTGGTGCTGGGAACCTGCTAGCTGAGCACTTCCACAAGGGCATACCCCTGGGGGCAGGGGCTGGGGCTGAGAACTGCAGC
1361 CCTGGGTCTTCCCTTAGGGAGGAAGGGCAGATGAACCCAGCAGGCTTAGGAGGTGGCACTGGGTGAGGACAGCTGGGCAG
1441 GGGCTGCAGAGGGAGGTGGAAATGAACCCTGAGGGCTCCCCCAACTTGCCATGCCCTGTCCCTTAGTAGATGAGTTGCTC
1521 CTGATTGGTCATTGGGTTTGGGTGAGGCCTGGAGGCTTCAGAGGTGAATTTATGCTTGGGAAGCCTGATCCCAAACCTGA
1601 AGGGAAGGGACTTGGATCTCCTTATATTGAATAAGCTGTTTGGAGGAAGGTGTCTGTCTGGGAGGATGGGGCAGTAAATG
1681 AGGTTGGCAGAGTGGCAGTGGGGGCTCTGCAGAGCCAGCCTTGGAGCCTGCTCATTCTGGGCCCTTGCTGCCAAGGAGCC
1761 CAGCCTCACCTAGCAGGAAAGGAGATGAAGGCCCTCCTCCCAGGAGGTAGGGTCTTGGCTGCCCCGAACTTAAATGCTTT
1841 TGAAATCTCTTAGATGTGGAAATATTTTTTCGAACCTGAAAATGCAGCTGGTAGAATTTCAATGGAAGCATAATCCATGT
1921 AAAATATATTTTAGTTGATATTTTGTAAAATGCACTTTTTGTGTGTGTTGATCCTGGTTTCCCAGATCTGTATTTCAGTG
2001 TTTACAAGGGAGGAAGGACCTTTCCTCACCTCCCTTTTGACAGAGATTAGAAGTACTTCTTTAAGAAAAAAATAAATTTG
2081 AGAAATTGTATTGATTTAGAAAAGGATCGTTTAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agacaGAAAACG--AUGUGUAa 5'
               || ||||  ||||||| 
Target 5' ttttcCTCTTGCCTTACACATg 3'
 824 - 845 157.00 -9.20
2 
miRNA  3' agACAGAAAACGAUGUGUAa 5'
            || ||   ||||| ||| 
Target 5' caTG-CTGGGGCTACCCATg 3'
 13 - 31 121.00 -9.30
3 
miRNA  3' agaCAGAAAAC----GAUGUGuaa 5'
             ||||||||    :|:|||   
Target 5' ctaGTCTTTTGTAGATTGCACtaa 3'
 956 - 979 111.00 -12.12
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN30126823 7 COSMIC
COSN28737545 9 COSMIC
COSN31581349 18 COSMIC
COSN31611569 34 COSMIC
COSN30464925 41 COSMIC
COSN30119928 43 COSMIC
COSN30133645 47 COSMIC
COSN30523066 66 COSMIC
COSN13618134 95 COSMIC
COSN8743895 224 COSMIC
COSN19717311 326 COSMIC
COSN26584727 382 COSMIC
COSN15146163 392 COSMIC
COSN31585157 516 COSMIC
COSN25896941 754 COSMIC
COSN31534450 774 COSMIC
COSN26679474 796 COSMIC
COSN25444565 814 COSMIC
COSN25884562 867 COSMIC
COSN21513581 974 COSMIC
COSN30175306 1201 COSMIC
COSN31577578 1329 COSMIC
COSN1176500 1417 COSMIC
COSN31524664 1495 COSMIC
COSN26603409 1565 COSMIC
COSN29461195 1683 COSMIC
COSN27637079 1913 COSMIC
COSN1675737 1964 COSMIC
COSN31547689 2060 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1373364145 1 dbSNP
rs1175339431 2 dbSNP
rs765026573 3 dbSNP
rs750173683 4 dbSNP
rs1256282336 5 dbSNP
rs763306177 6 dbSNP
rs1423360596 7 dbSNP
rs201083172 8 dbSNP
rs3743145 9 dbSNP
rs753132402 11 dbSNP
rs1372649277 12 dbSNP
rs1414367438 17 dbSNP
rs756447517 19 dbSNP
rs374309329 20 dbSNP
rs1187820513 23 dbSNP
rs749611114 24 dbSNP
rs771795688 26 dbSNP
rs372271034 28 dbSNP
rs746548762 29 dbSNP
rs769014844 30 dbSNP
rs200509759 32 dbSNP
rs1345685353 37 dbSNP
rs776725029 40 dbSNP
rs1276627531 43 dbSNP
rs1448741422 44 dbSNP
rs769616736 46 dbSNP
rs773104079 47 dbSNP
rs1476960135 49 dbSNP
rs1202089824 51 dbSNP
rs751641059 52 dbSNP
rs564029284 55 dbSNP
rs1044812984 57 dbSNP
rs1353440040 59 dbSNP
rs1452276460 62 dbSNP
rs1314651498 64 dbSNP
rs1396330975 66 dbSNP
rs1395575368 68 dbSNP
rs1170417836 70 dbSNP
rs1463758385 76 dbSNP
rs1390704706 84 dbSNP
rs577701173 89 dbSNP
rs948111084 97 dbSNP
rs1166204937 101 dbSNP
rs1393192906 113 dbSNP
rs543789175 124 dbSNP
rs182902850 125 dbSNP
rs1017175362 126 dbSNP
rs1189286694 126 dbSNP
rs199708769 126 dbSNP
rs1258333571 127 dbSNP
rs529114671 127 dbSNP
rs1334916126 128 dbSNP
rs538681127 128 dbSNP
rs559613550 129 dbSNP
rs1299072191 131 dbSNP
rs979713350 132 dbSNP
rs1164341661 134 dbSNP
rs1470113155 136 dbSNP
rs1031254602 137 dbSNP
rs528518288 140 dbSNP
rs551371233 141 dbSNP
rs891361985 142 dbSNP
rs956797155 143 dbSNP
rs1008426712 144 dbSNP
rs547404402 146 dbSNP
rs12102072 149 dbSNP
rs1467021475 161 dbSNP
rs974862297 164 dbSNP
rs1027395516 166 dbSNP
rs1349803005 179 dbSNP
rs1190254380 188 dbSNP
rs551024340 192 dbSNP
rs371637937 193 dbSNP
rs1240841273 203 dbSNP
rs1176785753 207 dbSNP
rs548464420 210 dbSNP
rs1302936170 212 dbSNP
rs1448758515 212 dbSNP
rs1190883165 213 dbSNP
rs1439069049 220 dbSNP
rs951729879 224 dbSNP
rs567914196 226 dbSNP
rs983096419 233 dbSNP
rs897331566 241 dbSNP
rs774868353 250 dbSNP
rs754749551 251 dbSNP
rs1394921416 256 dbSNP
rs939220275 261 dbSNP
rs781285554 262 dbSNP
rs1051365645 265 dbSNP
rs1198902591 267 dbSNP
rs916360039 275 dbSNP
rs536466843 279 dbSNP
rs1006924951 280 dbSNP
rs1315372792 284 dbSNP
rs1279395994 286 dbSNP
rs1341747223 292 dbSNP
rs1018357044 301 dbSNP
rs1244876544 304 dbSNP
rs1275700458 305 dbSNP
rs1272215122 313 dbSNP
rs1430032515 316 dbSNP
rs553482410 317 dbSNP
rs1210397652 318 dbSNP
rs1268558592 319 dbSNP
rs972324480 320 dbSNP
rs572177852 326 dbSNP
rs187282173 327 dbSNP
rs1258182673 330 dbSNP
rs1474787410 335 dbSNP
rs868537485 337 dbSNP
rs1239929346 338 dbSNP
rs1195716037 339 dbSNP
rs1488606546 341 dbSNP
rs1256747826 343 dbSNP
rs1208417832 348 dbSNP
rs1424533060 351 dbSNP
rs1187287664 352 dbSNP
rs1349794481 354 dbSNP
rs956555078 360 dbSNP
rs1279579700 361 dbSNP
rs1214269107 363 dbSNP
rs557881606 367 dbSNP
rs1272046171 369 dbSNP
rs577743766 371 dbSNP
rs544819471 372 dbSNP
rs1355338680 373 dbSNP
rs1311595504 374 dbSNP
rs917859113 376 dbSNP
rs1160119724 378 dbSNP
rs1334398860 379 dbSNP
rs1409051957 381 dbSNP
rs969015946 386 dbSNP
rs935358234 392 dbSNP
rs1172135564 395 dbSNP
rs1388383374 397 dbSNP
rs370144926 400 dbSNP
rs374815323 401 dbSNP
rs1237880453 403 dbSNP
rs1204064240 405 dbSNP
rs891392960 408 dbSNP
rs1403518036 409 dbSNP
rs1260269883 415 dbSNP
rs1008874344 433 dbSNP
rs1018448924 434 dbSNP
rs928879963 435 dbSNP
rs941743309 437 dbSNP
rs900030843 438 dbSNP
rs995685421 439 dbSNP
rs1235749254 441 dbSNP
rs1027427865 442 dbSNP
rs1440499022 447 dbSNP
rs951760987 449 dbSNP
rs930152085 455 dbSNP
rs1465640695 457 dbSNP
rs983127719 462 dbSNP
rs1229872993 467 dbSNP
rs573852473 467 dbSNP
rs1425535442 469 dbSNP
rs1051335102 472 dbSNP
rs1176370931 478 dbSNP
rs1468413517 484 dbSNP
rs1316197330 487 dbSNP
rs1468087951 490 dbSNP
rs542460342 493 dbSNP
rs1224401002 498 dbSNP
rs1322799602 499 dbSNP
rs192020070 508 dbSNP
rs770036987 509 dbSNP
rs1284220215 526 dbSNP
rs1222361390 530 dbSNP
rs891423559 531 dbSNP
rs1310989564 538 dbSNP
rs1447109105 541 dbSNP
rs1257742570 543 dbSNP
rs960659461 551 dbSNP
rs1483519916 555 dbSNP
rs1459020988 562 dbSNP
rs992451756 563 dbSNP
rs1158308049 566 dbSNP
rs528262847 568 dbSNP
rs1255521422 573 dbSNP
rs139547566 578 dbSNP
rs1382015678 595 dbSNP
rs1179461055 597 dbSNP
rs1040075552 598 dbSNP
rs865799535 602 dbSNP
rs1484044764 610 dbSNP
rs1251398577 620 dbSNP
rs1183168043 622 dbSNP
rs1488852562 627 dbSNP
rs1407524610 635 dbSNP
rs1417761711 655 dbSNP
rs916493489 657 dbSNP
rs1356255978 658 dbSNP
rs1178660433 659 dbSNP
rs969667208 669 dbSNP
rs1001331973 670 dbSNP
rs777980691 677 dbSNP
rs879447742 678 dbSNP
rs925401585 679 dbSNP
rs565022217 688 dbSNP
rs1052406959 689 dbSNP
rs1411126331 691 dbSNP
rs1308324466 699 dbSNP
rs1024848420 700 dbSNP
rs912526750 702 dbSNP
rs969240679 708 dbSNP
rs944042561 709 dbSNP
rs1393435719 715 dbSNP
rs1178527592 716 dbSNP
rs1433834916 718 dbSNP
rs1040397347 728 dbSNP
rs1303178050 734 dbSNP
rs1185262941 738 dbSNP
rs1312507807 741 dbSNP
rs184188890 742 dbSNP
rs1278017484 745 dbSNP
rs1344491538 755 dbSNP
rs1205941509 762 dbSNP
rs1253869964 767 dbSNP
rs1235043764 778 dbSNP
rs996104918 778 dbSNP
rs1312230885 780 dbSNP
rs1232571006 782 dbSNP
rs1216281108 783 dbSNP
rs1342253498 784 dbSNP
rs1298740052 785 dbSNP
rs1413882521 787 dbSNP
rs1399876612 790 dbSNP
rs1304809546 793 dbSNP
rs550923768 794 dbSNP
rs1048563710 802 dbSNP
rs972207159 803 dbSNP
rs374599034 806 dbSNP
rs1168363704 807 dbSNP
rs1478844711 809 dbSNP
rs879173986 815 dbSNP
rs1424891922 816 dbSNP
rs1187941337 819 dbSNP
rs919038198 822 dbSNP
rs930120838 830 dbSNP
rs1193092764 841 dbSNP
rs77074285 844 dbSNP
rs1250446257 849 dbSNP
rs774566422 855 dbSNP
rs1014605957 856 dbSNP
rs1278755375 860 dbSNP
rs1232676095 862 dbSNP
rs1338458978 870 dbSNP
rs960687029 880 dbSNP
rs1396419374 881 dbSNP
rs960073503 890 dbSNP
rs1395954548 896 dbSNP
rs536906760 896 dbSNP
rs1172316442 900 dbSNP
rs1467234966 904 dbSNP
rs1392557775 906 dbSNP
rs546967458 907 dbSNP
rs1460382630 915 dbSNP
rs1370726599 925 dbSNP
rs1170499969 926 dbSNP
rs567115239 928 dbSNP
rs1418869490 930 dbSNP
rs1439601523 931 dbSNP
rs1176460581 934 dbSNP
rs1458713603 952 dbSNP
rs1294864030 953 dbSNP
rs539215427 962 dbSNP
rs979250545 967 dbSNP
rs1354115308 973 dbSNP
rs1267147410 975 dbSNP
rs925095466 979 dbSNP
rs1439888365 982 dbSNP
rs1301232594 995 dbSNP
rs1449331787 1003 dbSNP
rs1344195721 1005 dbSNP
rs1377712663 1007 dbSNP
rs936713036 1009 dbSNP
rs1403709373 1013 dbSNP
rs555211534 1018 dbSNP
rs679882 1019 dbSNP
rs571333760 1023 dbSNP
rs1378929865 1030 dbSNP
rs988153765 1038 dbSNP
rs912644150 1044 dbSNP
rs1441101173 1047 dbSNP
rs537605973 1048 dbSNP
rs1192385688 1050 dbSNP
rs1305787883 1054 dbSNP
rs1013629892 1064 dbSNP
rs1283680464 1078 dbSNP
rs760742943 1078 dbSNP
rs1242079458 1079 dbSNP
rs149719975 1080 dbSNP
rs1468367340 1082 dbSNP
rs1002508618 1084 dbSNP
rs556869064 1090 dbSNP
rs921526494 1093 dbSNP
rs1434326276 1094 dbSNP
rs931557356 1097 dbSNP
rs1324780638 1098 dbSNP
rs573862318 1099 dbSNP
rs1016206113 1101 dbSNP
rs1359004027 1118 dbSNP
rs1250489212 1119 dbSNP
rs963361590 1123 dbSNP
rs542950636 1125 dbSNP
rs1380482148 1129 dbSNP
rs971791334 1138 dbSNP
rs954410158 1140 dbSNP
rs1048595656 1150 dbSNP
rs188691405 1158 dbSNP
rs1378927212 1162 dbSNP
rs1199474449 1165 dbSNP
rs1418185432 1167 dbSNP
rs1260942239 1168 dbSNP
rs1004376547 1177 dbSNP
rs1218467750 1181 dbSNP
rs987231271 1183 dbSNP
rs1279851903 1186 dbSNP
rs1217728674 1187 dbSNP
rs1347207541 1195 dbSNP
rs1275571204 1196 dbSNP
rs912710882 1201 dbSNP
rs1407648240 1218 dbSNP
rs1166558641 1225 dbSNP
rs192809334 1229 dbSNP
rs764776219 1233 dbSNP
rs896219417 1237 dbSNP
rs776495534 1238 dbSNP
rs544769029 1241 dbSNP
rs117186658 1246 dbSNP
rs184140973 1269 dbSNP
rs1359955147 1270 dbSNP
rs969730744 1272 dbSNP
rs1421329279 1275 dbSNP
rs879918420 1284 dbSNP
rs541054937 1293 dbSNP
rs1052348638 1296 dbSNP
rs1478006465 1298 dbSNP
rs1309232707 1304 dbSNP
rs1000701201 1305 dbSNP
rs1230094526 1308 dbSNP
rs1313770298 1313 dbSNP
rs762481023 1318 dbSNP
rs1212017516 1320 dbSNP
rs1279647954 1322 dbSNP
rs34657753 1325 dbSNP
rs544287465 1326 dbSNP
rs949444386 1327 dbSNP
rs1046485677 1329 dbSNP
rs905017986 1335 dbSNP
rs1270444442 1338 dbSNP
rs1002072734 1341 dbSNP
rs1215709951 1344 dbSNP
rs1016587683 1345 dbSNP
rs561371429 1351 dbSNP
rs1032145506 1355 dbSNP
rs1474173774 1360 dbSNP
rs530037059 1361 dbSNP
rs899121784 1362 dbSNP
rs993829976 1363 dbSNP
rs1025955877 1364 dbSNP
rs1183073502 1365 dbSNP
rs1418170977 1367 dbSNP
rs1172723036 1372 dbSNP
rs956576189 1373 dbSNP
rs1466126655 1376 dbSNP
rs1412991279 1377 dbSNP
rs954378586 1380 dbSNP
rs1008632362 1381 dbSNP
rs987913446 1390 dbSNP
rs1179865674 1400 dbSNP
rs1473670687 1401 dbSNP
rs1351899277 1402 dbSNP
rs1017393214 1406 dbSNP
rs1178303983 1407 dbSNP
rs964550062 1412 dbSNP
rs866048951 1416 dbSNP
rs975644951 1417 dbSNP
rs1199366156 1422 dbSNP
rs925444148 1438 dbSNP
rs1474693577 1439 dbSNP
rs1162282489 1445 dbSNP
rs1020144641 1454 dbSNP
rs547298278 1458 dbSNP
rs567157502 1459 dbSNP
rs1380410678 1471 dbSNP
rs1284390092 1472 dbSNP
rs988368464 1475 dbSNP
rs913882040 1478 dbSNP
rs1446884145 1481 dbSNP
rs975837134 1486 dbSNP
rs1046452265 1490 dbSNP
rs1406850931 1491 dbSNP
rs921235178 1505 dbSNP
rs1158262363 1508 dbSNP
rs931561064 1511 dbSNP
rs1240268583 1515 dbSNP
rs937840165 1515 dbSNP
rs187184534 1519 dbSNP
rs908792267 1528 dbSNP
rs993389888 1531 dbSNP
rs940196008 1533 dbSNP
rs1057308476 1536 dbSNP
rs1285824011 1547 dbSNP
rs1376834166 1557 dbSNP
rs191680203 1567 dbSNP
rs1008601300 1577 dbSNP
rs146738127 1589 dbSNP
rs949141166 1592 dbSNP
rs1223564982 1597 dbSNP
rs964451230 1598 dbSNP
rs1350413300 1600 dbSNP
rs1045133951 1601 dbSNP
rs1444604425 1612 dbSNP
rs904824617 1612 dbSNP
rs1417666459 1620 dbSNP
rs1000482275 1621 dbSNP
rs1032240982 1622 dbSNP
rs1432635612 1626 dbSNP
rs892368217 1639 dbSNP
rs1193412823 1642 dbSNP
rs1257629278 1647 dbSNP
rs1489058490 1651 dbSNP
rs537109063 1655 dbSNP
rs751163305 1657 dbSNP
rs1489505728 1661 dbSNP
rs1413703283 1663 dbSNP
rs1470421135 1671 dbSNP
rs754876155 1675 dbSNP
rs764023397 1676 dbSNP
rs1220459719 1685 dbSNP
rs1346025557 1688 dbSNP
rs1277516091 1689 dbSNP
rs1397885922 1693 dbSNP
rs1405474354 1699 dbSNP
rs373633570 1700 dbSNP
rs1362264256 1701 dbSNP
rs1416129782 1708 dbSNP
rs1465780371 1717 dbSNP
rs1357655267 1720 dbSNP
rs1178238764 1725 dbSNP
rs56329271 1729 dbSNP
rs1019418298 1734 dbSNP
rs767392620 1735 dbSNP
rs965847238 1761 dbSNP
rs914185215 1775 dbSNP
rs970695706 1777 dbSNP
rs8826 1788 dbSNP
rs926620435 1795 dbSNP
rs1200254717 1797 dbSNP
rs1482687670 1801 dbSNP
rs1413010209 1804 dbSNP
rs1028818521 1811 dbSNP
rs1211557945 1815 dbSNP
rs14363 1827 dbSNP
rs535854109 1834 dbSNP
rs1336553679 1836 dbSNP
rs1342125709 1838 dbSNP
rs1295952838 1839 dbSNP
rs1395241209 1843 dbSNP
rs1377195193 1848 dbSNP
rs1441984730 1850 dbSNP
rs1304826850 1855 dbSNP
rs984104299 1856 dbSNP
rs552863548 1862 dbSNP
rs777730689 1863 dbSNP
rs749332215 1867 dbSNP
rs1467593130 1872 dbSNP
rs572773160 1873 dbSNP
rs1235682457 1885 dbSNP
rs993425340 1889 dbSNP
rs1422458698 1898 dbSNP
rs929151925 1903 dbSNP
rs1346606613 1904 dbSNP
rs1461374634 1910 dbSNP
rs1256930802 1918 dbSNP
rs1047669440 1927 dbSNP
rs1208079868 1930 dbSNP
rs890415848 1933 dbSNP
rs867379652 1951 dbSNP
rs1251843516 1962 dbSNP
rs1438080964 1968 dbSNP
rs1319748599 1972 dbSNP
rs1315111004 1975 dbSNP
rs1317152703 1977 dbSNP
rs1180592527 2001 dbSNP
rs1230979024 2007 dbSNP
rs917387453 2008 dbSNP
rs1174258055 2009 dbSNP
rs544806598 2010 dbSNP
rs1394392105 2017 dbSNP
rs1220442760 2020 dbSNP
rs1449133724 2032 dbSNP
rs879150298 2033 dbSNP
rs1163240738 2034 dbSNP
rs1456685145 2038 dbSNP
rs1432993949 2039 dbSNP
rs1166453087 2042 dbSNP
rs949169034 2044 dbSNP
rs1044857340 2049 dbSNP
rs143727910 2051 dbSNP
rs1409632264 2052 dbSNP
rs1038661931 2057 dbSNP
rs900181377 2072 dbSNP
rs1209240705 2073 dbSNP
rs1487377707 2074 dbSNP
rs936367267 2077 dbSNP
rs999927290 2078 dbSNP
rs1246449110 2079 dbSNP
rs1353209683 2082 dbSNP
rs1307379670 2085 dbSNP
rs1327029991 2088 dbSNP
rs1033200743 2091 dbSNP
rs1333190391 2101 dbSNP
rs1385650215 2104 dbSNP
rs893965869 2105 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions Hela
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1048187. RNA binding protein: AGO2. Condition:Hela_AGO2_CLIP_control ...

- Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al., 2013, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agacagaAAACGAUGUGUAa 5'
                 ||||:|: | || 
Target 5' uaccugaUUUGUUGAAGAUu 3'
 		5 - 24
Article - Xue Y; Ouyang K; Huang J; Zhou Y; Ouyang H; et al.
- Cell, 2013
The induction of pluripotency or trans-differentiation of one cell type to another can be accomplished with cell-lineage-specific transcription factors. Here, we report that repression of a single RNA binding polypyrimidine-tract-binding (PTB) protein, which occurs during normal brain development via the action of miR-124, is sufficient to induce trans-differentiation of fibroblasts into functional neurons. Besides its traditional role in regulated splicing, we show that PTB has a previously undocumented function in the regulation of microRNA functions, suppressing or enhancing microRNA targeting by competitive binding on target mRNA or altering local RNA secondary structure. A key event during neuronal induction is the relief of PTB-mediated blockage of microRNA action on multiple components of the REST complex, thereby derepressing a large array of neuronal genes, including miR-124 and multiple neuronal-specific transcription factors, in nonneuronal cells. This converts a negative feedback loop to a positive one to elicit cellular reprogramming to the neuronal lineage.
LinkOut: [PMID: 23313552]
CLIP-seq Support 1 for dataset GSM1048187
Method / RBP HITS-CLIP / AGO2
Cell line / Condition Hela / Hela_AGO2_CLIP_control
Location of target site ENST00000416165.1 | 3UTR | UUGCUACCUGAUUUGUUGAAGAUUUUUCCUCUUGCCUU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23313552 / GSE42701
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
239 hsa-miR-511-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT068303 KATNAL1 katanin catalytic subunit A1 like 1 2 2
MIRT072025 SCP2 sterol carrier protein 2 2 2
MIRT073626 IGF1R insulin like growth factor 1 receptor 2 2
MIRT080574 PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 2 8
MIRT094167 PCGF3 polycomb group ring finger 3 2 4
MIRT096536 LIFR LIF receptor alpha 2 2
MIRT156224 SLC25A12 solute carrier family 25 member 12 2 2
MIRT177714 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT184922 ZNF268 zinc finger protein 268 2 2
MIRT185107 LYPLAL1 lysophospholipase like 1 2 2
MIRT193093 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT213346 TADA2B transcriptional adaptor 2B 2 2
MIRT225350 SDCBP syndecan binding protein 2 2
MIRT226972 AKAP2 A-kinase anchoring protein 2 2 6
MIRT226977 PALM2-AKAP2 PALM2-AKAP2 readthrough 2 6
MIRT229844 YIPF6 Yip1 domain family member 6 2 2
MIRT230994 PRRG4 proline rich and Gla domain 4 2 2
MIRT270215 ATP2A2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 2 4
MIRT277060 NDFIP2 Nedd4 family interacting protein 2 2 4
MIRT278336 CFL2 cofilin 2 2 4
MIRT280390 CALM1 calmodulin 1 2 2
MIRT298042 BACH1 BTB domain and CNC homolog 1 2 2
MIRT302449 CLIP4 CAP-Gly domain containing linker protein family member 4 2 2
MIRT311937 HNRNPA0 heterogeneous nuclear ribonucleoprotein A0 2 4
MIRT329263 AIMP1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 2 2
MIRT359186 F2RL1 F2R like trypsin receptor 1 2 6
MIRT363208 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT371124 YTHDC1 YTH domain containing 1 2 2
MIRT386755 TAOK1 TAO kinase 1 2 2
MIRT395122 BAHD1 bromo adjacent homology domain containing 1 2 2
MIRT396089 MKLN1 muskelin 1 2 2
MIRT443566 EVX2 even-skipped homeobox 2 2 2
MIRT447626 CUL3 cullin 3 2 2
MIRT447680 ZNF264 zinc finger protein 264 2 2
MIRT451053 NT5C1B 5'-nucleotidase, cytosolic IB 2 2
MIRT452048 NT5C1B-RDH14 NT5C1B-RDH14 readthrough 2 2
MIRT459890 KIAA1191 KIAA1191 2 4
MIRT464483 UGCG UDP-glucose ceramide glucosyltransferase 2 2
MIRT465264 TRIM44 tripartite motif containing 44 2 2
MIRT467570 SLITRK4 SLIT and NTRK like family member 4 2 2
MIRT467800 SLC2A14 solute carrier family 2 member 14 2 2
MIRT469543 RASAL2 RAS protein activator like 2 2 2
MIRT469931 PTPRJ protein tyrosine phosphatase, receptor type J 2 4
MIRT474056 LMNB2 lamin B2 2 2
MIRT474097 LMBR1L limb development membrane protein 1 like 2 2
MIRT475183 INSIG2 insulin induced gene 2 2 6
MIRT484264 FAM177A1 family with sequence similarity 177 member A1 2 2
MIRT487567 LOXL2 lysyl oxidase like 2 2 2
MIRT499080 CBWD1 COBW domain containing 1 2 6
MIRT499126 CBWD5 COBW domain containing 5 2 6
MIRT502093 KPNA5 karyopherin subunit alpha 5 2 8
MIRT503328 SOX5 SRY-box 5 2 6
MIRT503839 NCAM2 neural cell adhesion molecule 2 2 6
MIRT504030 CEP104 centrosomal protein 104 2 4
MIRT504314 LHFPL5 LHFPL tetraspan subfamily member 5 2 8
MIRT504525 BVES blood vessel epicardial substance 2 6
MIRT504680 CYGB cytoglobin 2 4
MIRT504815 DOCK7 dedicator of cytokinesis 7 2 4
MIRT505757 SENP1 SUMO1/sentrin specific peptidase 1 2 8
MIRT506151 PLEKHA3 pleckstrin homology domain containing A3 2 6
MIRT506908 KCNJ3 potassium voltage-gated channel subfamily J member 3 2 6
MIRT508259 CD226 CD226 molecule 2 2
MIRT508307 XRCC3 X-ray repair cross complementing 3 2 4
MIRT508784 CDKL1 cyclin dependent kinase like 1 2 6
MIRT508897 C4orf29 abhydrolase domain containing 18 2 6
MIRT508967 TECRL trans-2,3-enoyl-CoA reductase like 2 4
MIRT508973 MLLT3 MLLT3, super elongation complex subunit 2 6
MIRT509149 TSC22D3 TSC22 domain family member 3 2 4
MIRT509188 TSPAN2 tetraspanin 2 2 4
MIRT509212 BRCC3 BRCA1/BRCA2-containing complex subunit 3 2 4
MIRT509214 SEC23IP SEC23 interacting protein 2 6
MIRT509237 PDE10A phosphodiesterase 10A 2 6
MIRT509248 OTX1 orthodenticle homeobox 1 2 6
MIRT509469 TRIM2 tripartite motif containing 2 2 4
MIRT509754 EFCAB11 EF-hand calcium binding domain 11 2 4
MIRT509805 CHAF1B chromatin assembly factor 1 subunit B 2 4
MIRT509938 USP25 ubiquitin specific peptidase 25 2 4
MIRT509954 ITGA1 integrin subunit alpha 1 2 6
MIRT509965 KANSL1L KAT8 regulatory NSL complex subunit 1 like 2 4
MIRT509988 GTF2H1 general transcription factor IIH subunit 1 2 4
MIRT510036 NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 2 6
MIRT510164 STARD8 StAR related lipid transfer domain containing 8 2 4
MIRT510199 CYP4F11 cytochrome P450 family 4 subfamily F member 11 2 9
MIRT510249 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 6
MIRT510502 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta 2 2
MIRT510906 PURA purine rich element binding protein A 2 4
MIRT511051 NRF1 nuclear respiratory factor 1 2 4
MIRT511273 KLHL23 kelch like family member 23 2 4
MIRT511368 IL6ST interleukin 6 signal transducer 2 4
MIRT511521 HMGB2 high mobility group box 2 2 4
MIRT512004 DUSP7 dual specificity phosphatase 7 2 4
MIRT512080 CSRNP3 cysteine and serine rich nuclear protein 3 2 8
MIRT514234 EPOR erythropoietin receptor 2 4
MIRT515327 SLC35E3 solute carrier family 35 member E3 2 4
MIRT515409 WDR72 WD repeat domain 72 2 8
MIRT515973 C9orf156 tRNA methyltransferase O 2 4
MIRT516015 NLGN3 neuroligin 3 2 4
MIRT516271 DBT dihydrolipoamide branched chain transacylase E2 2 10
MIRT516495 GLRX2 glutaredoxin 2 2 4
MIRT517272 ANG angiogenin 2 4
MIRT517511 KCNK12 potassium two pore domain channel subfamily K member 12 2 4
MIRT517555 VENTX VENT homeobox 2 4
MIRT519511 RBM22 RNA binding motif protein 22 2 4
MIRT520350 UBN2 ubinuclein 2 2 2
MIRT520687 TMED7 transmembrane p24 trafficking protein 7 2 4
MIRT520960 SRGAP2 SLIT-ROBO Rho GTPase activating protein 2 2 2
MIRT521759 PPIL1 peptidylprolyl isomerase like 1 2 6
MIRT522036 PAPSS2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 2 4
MIRT522127 NELL2 neural EGFL like 2 2 4
MIRT522624 MAP7D1 MAP7 domain containing 1 2 4
MIRT522761 LDLR low density lipoprotein receptor 2 6
MIRT522924 KAT6A lysine acetyltransferase 6A 2 6
MIRT523391 GRIN2B glutamate ionotropic receptor NMDA type subunit 2B 2 4
MIRT523851 ETV6 ETS variant 6 2 2
MIRT523890 EPHA5 EPH receptor A5 2 4
MIRT523945 E2F8 E2F transcription factor 8 2 4
MIRT524222 DCUN1D3 defective in cullin neddylation 1 domain containing 3 2 2
MIRT524410 CNTNAP5 contactin associated protein like 5 2 4
MIRT524568 CALML4 calmodulin like 4 2 4
MIRT524611 ENTHD1 ENTH domain containing 1 2 2
MIRT524907 AMMECR1 Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 2 4
MIRT525019 ABHD13 abhydrolase domain containing 13 2 6
MIRT525211 C19orf12 chromosome 19 open reading frame 12 2 2
MIRT528253 BMS1 BMS1, ribosome biogenesis factor 2 2
MIRT528294 ZNF76 zinc finger protein 76 2 2
MIRT531898 INVS inversin 2 4
MIRT535962 MOGAT1 monoacylglycerol O-acyltransferase 1 2 2
MIRT540823 SSPN sarcospan 2 4
MIRT541836 CDON cell adhesion associated, oncogene regulated 2 4
MIRT541914 BMPR1A bone morphogenetic protein receptor type 1A 2 4
MIRT542156 KIAA2018 upstream transcription factor family member 3 2 6
MIRT542175 SERTM1 serine rich and transmembrane domain containing 1 2 6
MIRT542217 IRS1 insulin receptor substrate 1 2 4
MIRT542225 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 6
MIRT543654 PLEKHM3 pleckstrin homology domain containing M3 2 2
MIRT544097 EDA2R ectodysplasin A2 receptor 2 2
MIRT544533 SPPL3 signal peptide peptidase like 3 2 2
MIRT544954 TUB tubby bipartite transcription factor 2 4
MIRT545027 PLP1 proteolipid protein 1 2 2
MIRT546524 SERTAD3 SERTA domain containing 3 2 2
MIRT547242 OSBPL9 oxysterol binding protein like 9 2 4
MIRT548198 FNIP1 folliculin interacting protein 1 2 2
MIRT548272 FBXL20 F-box and leucine rich repeat protein 20 2 2
MIRT549480 ACBD5 acyl-CoA binding domain containing 5 2 2
MIRT549498 ABI2 abl interactor 2 2 2
MIRT550325 SMAD9 SMAD family member 9 2 2
MIRT550563 CYP4V2 cytochrome P450 family 4 subfamily V member 2 2 6
MIRT550642 AR androgen receptor 2 2
MIRT550945 CTSE cathepsin E 2 4
MIRT550961 POT1 protection of telomeres 1 2 2
MIRT551178 ATP7A ATPase copper transporting alpha 2 2
MIRT551416 LRRC31 leucine rich repeat containing 31 2 2
MIRT551507 ADH1B alcohol dehydrogenase 1B (class I), beta polypeptide 2 2
MIRT551517 MMADHC methylmalonic aciduria and homocystinuria, cblD type 2 2
MIRT551550 TMEM133 transmembrane protein 133 2 2
MIRT551757 TRIM42 tripartite motif containing 42 2 2
MIRT551872 TMEM47 transmembrane protein 47 2 2
MIRT551882 EPHA1 EPH receptor A1 2 2
MIRT551917 IGLON5 IgLON family member 5 2 2
MIRT552377 ZNF562 zinc finger protein 562 2 2
MIRT552543 ZHX3 zinc fingers and homeoboxes 3 2 2
MIRT553419 TRAF5 TNF receptor associated factor 5 2 2
MIRT554080 SNX4 sorting nexin 4 2 4
MIRT554588 RRAGC Ras related GTP binding C 2 2
MIRT554887 RCC2 regulator of chromosome condensation 2 2 2
MIRT555568 PLCB1 phospholipase C beta 1 2 2
MIRT555819 PCDH11Y protocadherin 11 Y-linked 2 4
MIRT555969 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT556028 MXD1 MAX dimerization protein 1 2 2
MIRT556206 MBNL2 muscleblind like splicing regulator 2 2 2
MIRT556251 MARCH3 membrane associated ring-CH-type finger 3 2 2
MIRT557265 HMGN3 high mobility group nucleosomal binding domain 3 2 2
MIRT557334 HHIP hedgehog interacting protein 2 2
MIRT557427 GXYLT2 glucoside xylosyltransferase 2 2 4
MIRT557537 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT557797 FREM2 FRAS1 related extracellular matrix protein 2 2 2
MIRT557805 FOXP1 forkhead box P1 2 2
MIRT558569 CRIM1 cysteine rich transmembrane BMP regulator 1 2 2
MIRT558734 CHORDC1 cysteine and histidine rich domain containing 1 2 2
MIRT558878 CCSER2 coiled-coil serine rich protein 2 2 2
MIRT558933 CBX1 chromobox 1 2 2
MIRT559133 BTG3 BTG anti-proliferation factor 3 2 4
MIRT559168 BRWD3 bromodomain and WD repeat domain containing 3 2 4
MIRT559618 AMER1 APC membrane recruitment protein 1 2 2
MIRT561627 SERBP1 SERPINE1 mRNA binding protein 1 2 2
MIRT561971 LRRC59 leucine rich repeat containing 59 2 2
MIRT563049 ZNF138 zinc finger protein 138 2 2
MIRT563432 TRIM13 tripartite motif containing 13 2 4
MIRT563540 RBM41 RNA binding motif protein 41 2 2
MIRT564647 ZNF544 zinc finger protein 544 2 2
MIRT567674 EIF5 eukaryotic translation initiation factor 5 2 2
MIRT567755 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT568267 BICD2 BICD cargo adaptor 2 2 2
MIRT569160 SIGMAR1 sigma non-opioid intracellular receptor 1 2 2
MIRT569179 DMD dystrophin 2 2
MIRT569427 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT569853 RGS5 regulator of G protein signaling 5 2 2
MIRT570554 PLAG1 PLAG1 zinc finger 2 2
MIRT571233 SYT9 synaptotagmin 9 2 2
MIRT572276 KCNJ6 potassium voltage-gated channel subfamily J member 6 2 2
MIRT572539 ZFHX2 zinc finger homeobox 2 2 2
MIRT574271 ZNF350 zinc finger protein 350 2 2
MIRT574428 SMC1A structural maintenance of chromosomes 1A 2 2
MIRT574671 HNRNPDL heterogeneous nuclear ribonucleoprotein D like 2 2
MIRT576699 Hps3 HPS3, biogenesis of lysosomal organelles complex 2 subunit 1 2 2
MIRT607889 SATB1 SATB homeobox 1 2 2
MIRT608846 FGF14 fibroblast growth factor 14 2 6
MIRT608854 SPATA6 spermatogenesis associated 6 2 2
MIRT608879 CNTF ciliary neurotrophic factor 2 6
MIRT608899 ZNF860 zinc finger protein 860 2 2
MIRT608948 C12orf60 chromosome 12 open reading frame 60 2 2
MIRT609029 CDH6 cadherin 6 2 2
MIRT609063 LPP LIM domain containing preferred translocation partner in lipoma 2 4
MIRT612277 ZNF280B zinc finger protein 280B 2 2
MIRT612520 SEPT7 septin 7 2 2
MIRT617202 GREM1 gremlin 1, DAN family BMP antagonist 2 2
MIRT618700 KIF13A kinesin family member 13A 2 2
MIRT619141 AFF2 AF4/FMR2 family member 2 2 2
MIRT621071 RAB11FIP3 RAB11 family interacting protein 3 2 6
MIRT627811 PTCHD1 patched domain containing 1 2 4
MIRT641782 ZBTB20 zinc finger and BTB domain containing 20 2 2
MIRT657645 GPRC5A G protein-coupled receptor class C group 5 member A 2 2
MIRT669313 C16orf72 chromosome 16 open reading frame 72 2 2
MIRT674602 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 2
MIRT684064 CPPED1 calcineurin like phosphoesterase domain containing 1 2 2
MIRT685149 TACR3 tachykinin receptor 3 2 2
MIRT693446 PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma 2 2
MIRT693808 WDR3 WD repeat domain 3 2 2
MIRT703845 ETV3 ETS variant 3 2 2
MIRT707100 ZNF850 zinc finger protein 850 2 2
MIRT707375 SVIP small VCP interacting protein 2 2
MIRT707467 ROCK2 Rho associated coiled-coil containing protein kinase 2 2 2
MIRT707514 PPP1R16B protein phosphatase 1 regulatory subunit 16B 2 2
MIRT707542 ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 2 2
MIRT707560 CLVS2 clavesin 2 2 2
MIRT708113 HACE1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 2 2
MIRT708217 ADD2 adducin 2 2 2
MIRT710678 MX2 MX dynamin like GTPase 2 2 2
MIRT755898 ZFPM2-AS1 ZFPM2 antisense RNA 1 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-511-3p Doxorubicin 31703 NSC123127 approved resistant High Anaplastic Thyroid Cancer tissue
hsa-miR-511-3p Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)

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