miRTarBase - #MIRT403798


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pre-miRNA Information
pre-miRNA hsa-mir-646   
Genomic Coordinates chr20: 60308474 - 60308567
Synonyms MIRN646, hsa-mir-646, MIR646
Description Homo sapiens miR-646 stem-loop
Comment None
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-646
Sequence 61| AAGCAGCUGCCUCUGAGGC |79
Evidence Experimental
Experiments SAGE
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs750684400 6 dbSNP
rs112880289 10 dbSNP
rs553679341 11 dbSNP
rs941692683 13 dbSNP
rs6513497 14 dbSNP
rs1431341059 18 dbSNP
rs1479355932 19 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol AKIRIN1   
Synonyms C1orf108, STRF2
Description akirin 1
Transcript NM_001136275   
Other Transcripts NM_024595   
Expression
Putative miRNA Targets on AKIRIN1
3'UTR of AKIRIN1
(miRNA target sites are highlighted)		 
>AKIRIN1|NM_001136275|3'UTR
   1 AGCTTTGTCACATATCTGGGTACCAGGTTTGACCTCAAGAGATGGCTGCTGTACACTTTTTGCAACTGGTTTGATGTCAC
  81 ATTTCAGCTCCAACTTTGCATCCTGAGAACACTTAAACGTTTCTGCAGGTCCATTTTATACAACTTGAAAGACCGTAAAA
 161 CTTTCTGGTTGCCACAAGCATATCTTTCTTTTCTGCTCATCCAATAAACAGCTGTGCCCTACTGTGATAGATTTTCCAAA
 241 CAAAAATACCTGGAGCAGCAGTTTAGCAAAATATGCCTTCAGTGGCATTCAACAAATGGAGTTTCCCCAAGCACAGTTCT
 321 GTAAGAAGTGCGTGTGAGAGTGTGTGTATATGTGTGTATGTGTATTTTAAGTTATTATTTGTATTGTGCAAAAATTTTTT
 401 TTTGATCTTGGGGATTCTGGCTGTGAATTTGGTGCACGACAATTATGGTAAAAAAACATTTGCTTGGTCTAAAGAAGATC
 481 ATTAATGTTTTGTGACCATACAAGTTGTAACAGTGGATTGTTTTTATGTGTAGGTATTGTTAAATACAGGGACTGTTTCC
 561 AGGCACAGAATATGAATCGTAAGTTAGGATGGACATTAGATGTGATTATGATGATAAAGCGAAGGTCTGCGGTCCTATAT
 641 CTACAGACACGTGGTGAGAAATTAGAACAAACTGGAGACGGGCCATTGACACATGGACTCTGCCTGGGCATGTTAGGTTA
 721 ATTCTTTGACTCCAAGCCTTAAAATACTCACATGGAGTCAGCGCTCACCTCATTCACACAATTATCATAGAGCTCCCTGG
 801 ACACTGAACCTCTAAAGGGAAAAGGTCTACCCTGGAGCCAGGAGCATCAGGGTTGGCTTGGGAGCATGAGAGGTGAGCCC
 881 AGGGCTAGGCCTGGGCCAGGCCCCGGCAGCACTGCTACTTGGGAGGAGCCACTTCACCTTTGTATTAGTTATTAAAAAAT
 961 ATAATTTGGGCTGGGCGCAGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGTCCGAGGCATGCGGATCACTTGAGGTC
1041 AGGAGTTCGAGACCACCCTGGCCAATATGGTGAAACCCCATCTCTACTAAAAATACAACAAAGTTAGCCGGGCGTGGTGG
1121 CAGGCGTCTGTAATCCCAGCTGCTTGGGAGGCTGAGGCAGGAGAATCACTTGAACCCTGGAGGTGGCGGTTGCAGTGAGC
1201 ACAGATCATGCCACTGCACTCCAGCCTGGGCAACAAAACGAGACTTCGTCTCAAAAAAAAAAAAAAAACATAGAATTTGG
1281 ATCCTTTGGTCGGGTTCTCCCAAATTCTTTTGAGGTGTCCATGGTCAACTGCTTCAGCTTTGTTTTGGCAACCCCCTGCC
1361 CGAAGTCGCATATAGGCTGTTCTTCACCTTGTTTCCAAGGCTGAGGAACAGAAAGTAGCCTCTGTTTTGAGGAGGTGGAA
1441 GTTAAGTATACATTTATTTTTTACTGTGACTTGTTCAGGACCACATTTTACAAAATGCCTTGTTTCCTTCATTGTTTCTG
1521 GAAAGGAAAGTTCTATTAATATTGTTTTACTTTGAATATAGAATAGTTTTTTTAATTAGGGCTTATTTTGAAAAATTCTG
1601 AGTTTAATTCAAATGTATGCCAATACCTTCCAAAGTAAGGTAATATTCAGAGACAGTTGTTGTGATCAGATGGCTTAGAG
1681 AAATTTCTGGAATATTCACATTCGAAGATTCCTTATTAATGAATGTCTTTGACTTAAATCTAACCAAAAACTGCAACATT
1761 ATTCTTTGTACATTTTCATTATATAGTGTTAACAAGCTTAGTTGCAAACAAATAAAATACTTAAGCTATTTGTTTACCTT
1841 GCCTTCTTAATACTGTGATAATGTTTATTAATTCAAATAACTTATGTGAGAGCTGCTATAACCATTTCCCCAGTTCAACA
1921 TTGCATTGAAAATTTATGGACCTTTAAAAAAAAAAGCCCAACAGTGATTTTTTTTTAATAATTAAAGAATGATTTTACTT
2001 TGTATTTGAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cgGAG-UCUCCGUCGACGAa 5'
            ||| |||| ::|||||| 
Target 5' acCTCAAGAGATGGCTGCTg 3'
 32 - 51 149.00 -22.80
2 
miRNA  3' cgGAGU-CUCCGUCGACGAa 5'
            ||:| | |  ||||||| 
Target 5' aaCTTATGTGAGAGCTGCTa 3'
 1879 - 1898 149.00 -12.20
3 
miRNA  3' cggagucuccGUCGACGAa 5'
                    |||||||| 
Target 5' tctgtaatccCAGCTGCTt 3'
 1127 - 1145 145.00 -12.70
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31545746 7 COSMIC
COSN30145779 17 COSMIC
COSN26965687 19 COSMIC
COSN30156457 37 COSMIC
COSN26508010 63 COSMIC
COSN30738798 95 COSMIC
COSN13543023 119 COSMIC
COSN13543028 127 COSMIC
COSN13543029 134 COSMIC
COSN20073987 148 COSMIC
COSN13543030 156 COSMIC
COSN30127298 169 COSMIC
COSN30115523 231 COSMIC
COSN16320331 251 COSMIC
COSN20090208 478 COSMIC
COSN31565531 550 COSMIC
COSN31577313 557 COSMIC
COSN31567716 579 COSMIC
COSN8638278 584 COSMIC
COSN29426741 618 COSMIC
COSN26275725 628 COSMIC
COSN26570012 638 COSMIC
COSN26275726 642 COSMIC
COSN31593556 680 COSMIC
COSN17338062 706 COSMIC
COSN26548990 718 COSMIC
COSN28759440 878 COSMIC
COSN31960221 1126 COSMIC
COSN15661671 1270 COSMIC
COSN19468670 1540 COSMIC
COSN29187760 1660 COSMIC
COSN23079007 1882 COSMIC
COSN28286824 1947 COSMIC
COSN28902517 1956 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1284950958 3 dbSNP
rs1200053251 4 dbSNP
rs1469086107 4 dbSNP
rs780507019 12 dbSNP
rs747365633 15 dbSNP
rs1400659600 16 dbSNP
rs149817455 18 dbSNP
rs371972577 20 dbSNP
rs1488690045 24 dbSNP
rs1164374843 25 dbSNP
rs376888630 27 dbSNP
rs1261708348 35 dbSNP
rs560428173 38 dbSNP
rs1188709025 39 dbSNP
rs772698878 44 dbSNP
rs200624052 45 dbSNP
rs1472265105 47 dbSNP
rs1161356793 51 dbSNP
rs558298991 60 dbSNP
rs1419819253 63 dbSNP
rs766200358 65 dbSNP
rs372089533 66 dbSNP
rs1397496987 67 dbSNP
rs1478401187 68 dbSNP
rs759259138 74 dbSNP
rs767272913 75 dbSNP
rs112358934 76 dbSNP
rs757539408 77 dbSNP
rs765455481 82 dbSNP
rs1458493597 86 dbSNP
rs750499638 88 dbSNP
rs1202629122 89 dbSNP
rs540498199 94 dbSNP
rs1347770852 98 dbSNP
rs981187259 104 dbSNP
rs760096142 115 dbSNP
rs780449239 116 dbSNP
rs1468988178 119 dbSNP
rs1358453850 120 dbSNP
rs1441106556 120 dbSNP
rs1181335080 124 dbSNP
rs1239651735 130 dbSNP
rs747493258 141 dbSNP
rs755304220 142 dbSNP
rs781618322 144 dbSNP
rs1377287744 145 dbSNP
rs747859259 149 dbSNP
rs11547140 155 dbSNP
rs1401203386 156 dbSNP
rs1450237062 165 dbSNP
rs1172774555 166 dbSNP
rs1333574080 167 dbSNP
rs928487643 168 dbSNP
rs934470049 172 dbSNP
rs574293996 174 dbSNP
rs769418667 175 dbSNP
rs1164923654 180 dbSNP
rs748518608 181 dbSNP
rs761309826 198 dbSNP
rs772754035 201 dbSNP
rs1200938974 203 dbSNP
rs748814525 205 dbSNP
rs1457935070 212 dbSNP
rs1177692429 213 dbSNP
rs914473781 217 dbSNP
rs1247785583 218 dbSNP
rs770413746 219 dbSNP
rs1199455295 220 dbSNP
rs1377034980 230 dbSNP
rs1341071320 231 dbSNP
rs1467996617 234 dbSNP
rs1401697069 241 dbSNP
rs1223950474 242 dbSNP
rs774157040 246 dbSNP
rs759510287 250 dbSNP
rs145873918 253 dbSNP
rs561299381 256 dbSNP
rs149002326 257 dbSNP
rs1387455865 258 dbSNP
rs1263326358 265 dbSNP
rs1043695370 269 dbSNP
rs1308929582 272 dbSNP
rs1221837278 273 dbSNP
rs536186747 275 dbSNP
rs932776346 282 dbSNP
rs1051117090 283 dbSNP
rs891322540 285 dbSNP
rs1266638197 297 dbSNP
rs1004365582 301 dbSNP
rs1486738732 308 dbSNP
rs1016278230 322 dbSNP
rs898714386 329 dbSNP
rs564050687 331 dbSNP
rs777067715 333 dbSNP
rs1426957995 341 dbSNP
rs144507104 347 dbSNP
rs1193074906 348 dbSNP
rs969705126 349 dbSNP
rs1167080521 359 dbSNP
rs1217391360 365 dbSNP
rs1385944057 367 dbSNP
rs1002654594 372 dbSNP
rs374677838 372 dbSNP
rs772898881 375 dbSNP
rs1301562492 378 dbSNP
rs1224921602 384 dbSNP
rs1162243581 390 dbSNP
rs1343135075 392 dbSNP
rs1282138920 395 dbSNP
rs1400062911 395 dbSNP
rs1343005204 408 dbSNP
rs192501029 415 dbSNP
rs1453509566 420 dbSNP
rs1360060219 436 dbSNP
rs759841694 438 dbSNP
rs546514050 439 dbSNP
rs184426490 443 dbSNP
rs535699624 447 dbSNP
rs1487681427 448 dbSNP
rs1288650890 450 dbSNP
rs1184650970 451 dbSNP
rs1360908301 452 dbSNP
rs114649333 455 dbSNP
rs776238261 457 dbSNP
rs778157728 457 dbSNP
rs921296354 468 dbSNP
rs1262112133 472 dbSNP
rs1316634225 477 dbSNP
rs532618590 478 dbSNP
rs1382115599 479 dbSNP
rs538264734 482 dbSNP
rs1339160950 493 dbSNP
rs1450896293 499 dbSNP
rs558210569 500 dbSNP
rs773631432 501 dbSNP
rs578060972 502 dbSNP
rs759045345 504 dbSNP
rs912623352 508 dbSNP
rs1467262461 512 dbSNP
rs1371359880 514 dbSNP
rs1318626204 524 dbSNP
rs1168284064 529 dbSNP
rs1037164335 535 dbSNP
rs534394061 535 dbSNP
rs1185208705 536 dbSNP
rs1459813195 551 dbSNP
rs554118337 552 dbSNP
rs1263004864 553 dbSNP
rs898657016 559 dbSNP
rs1249147507 565 dbSNP
rs995808058 569 dbSNP
rs1322866525 576 dbSNP
rs1044656488 578 dbSNP
rs1185687300 579 dbSNP
rs188119069 580 dbSNP
rs1332354013 590 dbSNP
rs1393327563 598 dbSNP
rs753263543 604 dbSNP
rs74067034 609 dbSNP
rs191787539 615 dbSNP
rs1181794169 621 dbSNP
rs955779891 622 dbSNP
rs1382771381 631 dbSNP
rs4147753 638 dbSNP
rs1384349370 642 dbSNP
rs754034280 644 dbSNP
rs1439218921 645 dbSNP
rs1021496742 646 dbSNP
rs968947234 649 dbSNP
rs143669799 651 dbSNP
rs1244392456 652 dbSNP
rs954063283 660 dbSNP
rs116861301 662 dbSNP
rs775066608 680 dbSNP
rs532927177 681 dbSNP
rs377493051 684 dbSNP
rs1338322999 685 dbSNP
rs1306561225 686 dbSNP
rs1387486907 693 dbSNP
rs986734273 695 dbSNP
rs1304924490 703 dbSNP
rs1422704604 704 dbSNP
rs760324852 707 dbSNP
rs1364834626 711 dbSNP
rs1383043817 716 dbSNP
rs1471001494 717 dbSNP
rs1451336190 721 dbSNP
rs546675938 726 dbSNP
rs912640802 732 dbSNP
rs750607210 734 dbSNP
rs763803371 744 dbSNP
rs1375520316 747 dbSNP
rs1224288366 752 dbSNP
rs1306147498 753 dbSNP
rs1287291676 760 dbSNP
rs868408964 763 dbSNP
rs1037516966 764 dbSNP
rs1260414648 765 dbSNP
rs1234200798 773 dbSNP
rs1205300064 784 dbSNP
rs1281482047 786 dbSNP
rs1445330351 788 dbSNP
rs920136022 795 dbSNP
rs1264030141 796 dbSNP
rs560047034 798 dbSNP
rs1461034666 800 dbSNP
rs758157396 803 dbSNP
rs1402288467 805 dbSNP
rs1201912229 807 dbSNP
rs1157674419 813 dbSNP
rs931456665 815 dbSNP
rs779757139 820 dbSNP
rs746961941 823 dbSNP
rs1044688999 826 dbSNP
rs745767804 827 dbSNP
rs1470514970 828 dbSNP
rs1177169001 830 dbSNP
rs4147752 832 dbSNP
rs1284050214 833 dbSNP
rs549270668 838 dbSNP
rs753657279 841 dbSNP
rs1325945704 843 dbSNP
rs1261424531 846 dbSNP
rs1223054894 848 dbSNP
rs569203358 850 dbSNP
rs1318681727 854 dbSNP
rs1270746508 866 dbSNP
rs1406452721 867 dbSNP
rs1324574063 870 dbSNP
rs1468957193 872 dbSNP
rs1453020780 883 dbSNP
rs1164289278 895 dbSNP
rs1173802428 896 dbSNP
rs1468882662 897 dbSNP
rs1419574660 903 dbSNP
rs1002549839 905 dbSNP
rs1355781572 914 dbSNP
rs538225984 922 dbSNP
rs1442231801 924 dbSNP
rs1056777103 927 dbSNP
rs891451111 933 dbSNP
rs551523490 934 dbSNP
rs866220882 938 dbSNP
rs768648325 945 dbSNP
rs1275242390 955 dbSNP
rs1225183477 962 dbSNP
rs761566142 968 dbSNP
rs904378575 970 dbSNP
rs1269452712 971 dbSNP
rs995941646 972 dbSNP
rs571711974 976 dbSNP
rs1322492236 977 dbSNP
rs1334334608 987 dbSNP
rs78361436 990 dbSNP
rs1330326222 991 dbSNP
rs1028879729 992 dbSNP
rs1275330060 1005 dbSNP
rs1419511071 1014 dbSNP
rs1438489528 1017 dbSNP
rs1203883015 1018 dbSNP
rs954594060 1019 dbSNP
rs1183325173 1026 dbSNP
rs554249990 1027 dbSNP
rs1234756631 1028 dbSNP
rs768239092 1037 dbSNP
rs567486130 1049 dbSNP
rs1200676710 1050 dbSNP
rs1223101017 1058 dbSNP
rs1019646119 1059 dbSNP
rs1312678698 1061 dbSNP
rs1479624830 1065 dbSNP
rs145060641 1066 dbSNP
rs1373615518 1071 dbSNP
rs1280923170 1072 dbSNP
rs972866622 1076 dbSNP
rs1353390985 1078 dbSNP
rs1421171179 1079 dbSNP
rs919984073 1087 dbSNP
rs1410081211 1095 dbSNP
rs556420791 1096 dbSNP
rs980235061 1097 dbSNP
rs1368692566 1098 dbSNP
rs1406710606 1110 dbSNP
rs1410518475 1111 dbSNP
rs1175684180 1114 dbSNP
rs1469731292 1115 dbSNP
rs1201626391 1118 dbSNP
rs747662280 1123 dbSNP
rs1289425127 1125 dbSNP
rs1317279311 1126 dbSNP
rs531906583 1127 dbSNP
rs576364144 1130 dbSNP
rs1402821102 1131 dbSNP
rs772774955 1136 dbSNP
rs762601872 1148 dbSNP
rs1349451991 1160 dbSNP
rs373085349 1161 dbSNP
rs1340282827 1163 dbSNP
rs1303071354 1167 dbSNP
rs1214129820 1170 dbSNP
rs938952068 1173 dbSNP
rs765193748 1182 dbSNP
rs1057385374 1183 dbSNP
rs1361610822 1184 dbSNP
rs1223893335 1186 dbSNP
rs891486862 1188 dbSNP
rs945684101 1189 dbSNP
rs1489974936 1215 dbSNP
rs1195735178 1220 dbSNP
rs548429793 1229 dbSNP
rs1475527851 1231 dbSNP
rs1018805173 1235 dbSNP
rs1166897850 1236 dbSNP
rs1042830108 1240 dbSNP
rs1213324043 1241 dbSNP
rs1328062334 1242 dbSNP
rs1387785992 1245 dbSNP
rs1263300991 1246 dbSNP
rs544187602 1249 dbSNP
rs1164156771 1251 dbSNP
rs1348732853 1253 dbSNP
rs1364645364 1253 dbSNP
rs542393644 1253 dbSNP
rs1364865532 1254 dbSNP
rs1287503682 1265 dbSNP
rs1430377644 1266 dbSNP
rs148712732 1269 dbSNP
rs80030342 1269 dbSNP
rs1205145881 1270 dbSNP
rs1384902368 1270 dbSNP
rs1320041876 1271 dbSNP
rs1327309839 1272 dbSNP
rs904241579 1280 dbSNP
rs1254929566 1284 dbSNP
rs995972877 1292 dbSNP
rs184048395 1293 dbSNP
rs1294056215 1304 dbSNP
rs890279424 1307 dbSNP
rs138842575 1313 dbSNP
rs1338989890 1315 dbSNP
rs1450762672 1316 dbSNP
rs539911811 1317 dbSNP
rs1401706190 1322 dbSNP
rs1298832582 1330 dbSNP
rs1463529292 1331 dbSNP
rs772340850 1335 dbSNP
rs1168212162 1347 dbSNP
rs370377538 1352 dbSNP
rs1246771774 1353 dbSNP
rs1385597708 1355 dbSNP
rs1185152270 1360 dbSNP
rs1291735296 1362 dbSNP
rs1357916287 1363 dbSNP
rs776059665 1368 dbSNP
rs1285408570 1369 dbSNP
rs761113062 1373 dbSNP
rs961421470 1374 dbSNP
rs879628230 1386 dbSNP
rs1340100736 1388 dbSNP
rs529077134 1396 dbSNP
rs1307970215 1399 dbSNP
rs764734458 1403 dbSNP
rs4433383 1406 dbSNP
rs575018785 1412 dbSNP
rs1027081886 1413 dbSNP
rs1394390176 1423 dbSNP
rs1306146781 1425 dbSNP
rs1429061150 1439 dbSNP
rs952735454 1441 dbSNP
rs1165249661 1444 dbSNP
rs1422514153 1448 dbSNP
rs1367591814 1450 dbSNP
rs1192064223 1452 dbSNP
rs189132319 1474 dbSNP
rs1245766042 1483 dbSNP
rs1247844455 1500 dbSNP
rs1180765505 1503 dbSNP
rs1490659653 1505 dbSNP
rs1445982284 1519 dbSNP
rs1183635815 1527 dbSNP
rs1384605711 1534 dbSNP
rs754371687 1536 dbSNP
rs1294502074 1539 dbSNP
rs927477377 1548 dbSNP
rs761817917 1551 dbSNP
rs938817746 1555 dbSNP
rs993116680 1557 dbSNP
rs1385411428 1559 dbSNP
rs1399860493 1567 dbSNP
rs913450415 1567 dbSNP
rs1241412844 1574 dbSNP
rs1318815767 1597 dbSNP
rs562760764 1600 dbSNP
rs1287827172 1601 dbSNP
rs745992756 1601 dbSNP
rs376008884 1603 dbSNP
rs561895518 1603 dbSNP
rs796897292 1606 dbSNP
rs1304868146 1609 dbSNP
rs1384912792 1611 dbSNP
rs1338713634 1615 dbSNP
rs1043081585 1616 dbSNP
rs181772912 1623 dbSNP
rs904284150 1624 dbSNP
rs931766354 1628 dbSNP
rs1241812113 1636 dbSNP
rs1409238007 1637 dbSNP
rs1050122134 1639 dbSNP
rs1480475816 1642 dbSNP
rs1271754137 1647 dbSNP
rs372339674 1653 dbSNP
rs796848707 1656 dbSNP
rs11547137 1657 dbSNP
rs1036295790 1658 dbSNP
rs897704260 1668 dbSNP
rs1350436570 1669 dbSNP
rs1207211155 1670 dbSNP
rs1348820076 1673 dbSNP
rs1203731815 1676 dbSNP
rs12091652 1679 dbSNP
rs1325733162 1684 dbSNP
rs1318394745 1687 dbSNP
rs1285159731 1701 dbSNP
rs994185484 1704 dbSNP
rs1027441749 1705 dbSNP
rs1383636001 1709 dbSNP
rs1386084547 1710 dbSNP
rs1319454791 1713 dbSNP
rs952680537 1721 dbSNP
rs1001646764 1733 dbSNP
rs1034414960 1741 dbSNP
rs1477999109 1742 dbSNP
rs1374073735 1756 dbSNP
rs1195863946 1765 dbSNP
rs765318782 1768 dbSNP
rs1421478820 1769 dbSNP
rs1261367353 1773 dbSNP
rs1183945595 1784 dbSNP
rs993376371 1793 dbSNP
rs913491855 1810 dbSNP
rs1229412177 1823 dbSNP
rs1364264019 1824 dbSNP
rs1362740846 1827 dbSNP
rs1469471004 1829 dbSNP
rs1452950256 1843 dbSNP
rs750612601 1848 dbSNP
rs758588199 1853 dbSNP
rs1407780161 1861 dbSNP
rs1408645709 1867 dbSNP
rs1413409640 1877 dbSNP
rs967994693 1884 dbSNP
rs1336245539 1886 dbSNP
rs551656847 1895 dbSNP
rs571511719 1899 dbSNP
rs928975937 1901 dbSNP
rs1241606993 1906 dbSNP
rs1393162510 1921 dbSNP
rs1209589008 1930 dbSNP
rs931632115 1936 dbSNP
rs1273689082 1939 dbSNP
rs185740979 1940 dbSNP
rs1339923904 1943 dbSNP
rs1246361724 1946 dbSNP
rs1282056044 1946 dbSNP
rs1296623446 1946 dbSNP
rs911614486 1946 dbSNP
rs1335653356 1956 dbSNP
rs1049231276 1960 dbSNP
rs1036567986 1968 dbSNP
rs547546697 1968 dbSNP
rs944565210 1968 dbSNP
rs941613134 1977 dbSNP
rs1324647230 1978 dbSNP
rs1223756164 1979 dbSNP
rs999917 1980 dbSNP
rs1482004276 1981 dbSNP
rs1197015100 1982 dbSNP
rs894663499 1999 dbSNP
rs1048992691 2002 dbSNP
rs529339397 2005 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions HEK293S
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... HITS-CLIP data was present in GSM1084064. RNA binding protein: AGO2. Condition:CLIP_noemetine_AbnovaAb ...

- Karginov FV; Hannon GJ, 2013, Genes & development.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' cggagucuccgUCGACGAa 5'
                     ||||||| 
Target 5' -----------AGCUGCUu 3'
 		1 - 8
Article - Karginov FV; Hannon GJ
- Genes & development, 2013
When adapting to environmental stress, cells attenuate and reprogram their translational output. In part, these altered translation profiles are established through changes in the interactions between RNA-binding proteins and mRNAs. The Argonaute 2 (Ago2)/microRNA (miRNA) machinery has been shown to participate in stress-induced translational up-regulation of a particular mRNA, CAT-1; however, a detailed, transcriptome-wide understanding of the involvement of Ago2 in the process has been lacking. Here, we profiled the overall changes in Ago2-mRNA interactions upon arsenite stress by cross-linking immunoprecipitation (CLIP) followed by high-throughput sequencing (CLIP-seq). Ago2 displayed a significant remodeling of its transcript occupancy, with the majority of 3' untranslated region (UTR) and coding sequence (CDS) sites exhibiting stronger interaction. Interestingly, target sites that were destined for release from Ago2 upon stress were depleted in miRNA complementarity signatures, suggesting an alternative mode of interaction. To compare the changes in Ago2-binding patterns across transcripts with changes in their translational states, we measured mRNA profiles on ribosome/polysome gradients by RNA sequencing (RNA-seq). Increased Ago2 occupancy correlated with stronger repression of translation for those mRNAs, as evidenced by a shift toward lighter gradient fractions upon stress, while release of Ago2 was associated with the limited number of transcripts that remained translated. Taken together, these data point to a role for Ago2 and the mammalian miRNAs in mediating the translational component of the stress response.
LinkOut: [PMID: 23824327]
CLIP-seq Support 1 for dataset GSM4903834
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_b
Location of target site NM_001136275 | 3UTR | UGCUUGGGAGGCUGAGGCAGGAGAAUCACUUGAACCCUGGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM4903835
Method / RBP HITS-CLIP / AGO
Cell line / Condition Dermal fibroblasts / CTL_TD_21_c
Location of target site NM_001136275 | 3UTR | GCUUGGGAGGCUGAGGCAGGAGAAUCACUUGAACCCUGGAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Accession Series GSE161239
CLIP-seq Viewer Link
CLIP-seq Support 3 for dataset GSM1084064
Method / RBP HITS-CLIP / AGO2
Cell line / Condition HEK293S / CLIP_noemetine_AbnovaAb
Location of target site ENST00000432648.3 | 3UTR | AGCUGCUUGGGAGGCUGAGGCAGGAGAAUCACUUGA
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 23824327 / GSE44404
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
GSE28260 Renal cortex and medulla -0.846 1.3e-4 -0.813 3.6e-4 13 Click to see details
GSE27834 Pluripotent stem cells -0.66 2.7e-3 -0.559 1.2e-2 16 Click to see details
GSE14794 Lymphoblastoid cells 0.187 3.9e-2 0.136 1.0e-1 90 Click to see details
GSE38974 Chronic obstructive pulmonary disease 0.339 4.9e-2 0.332 5.2e-2 25 Click to see details
GSE28544 Breast cancer -0.28 9.3e-2 -0.283 9.0e-2 24 Click to see details
GSE21849 B cell lymphoma 0.233 1.1e-1 0.298 5.8e-2 29 Click to see details
GSE32688 Pancreatic cancer 0.202 1.3e-1 0.224 1.1e-1 32 Click to see details
GSE34608 Pulmonary tuberculosis and sarcoidosis -0.197 2.0e-1 -0.635 1.3e-3 20 Click to see details
GSE26953 Aortic valvular endothelial cells 0.077 3.6e-1 0.110 3.0e-1 24 Click to see details
GSE21687 Ependynoma primary tumors -0.025 4.2e-1 0.049 3.5e-1 64 Click to see details
GSE17306 Multiple myeloma 0.018 4.5e-1 0.470 3.3e-4 49 Click to see details
GSE17498 Multiple myeloma -0.017 4.6e-1 0.011 4.7e-1 40 Click to see details
GSE42095 Differentiated embryonic stem cells -0.021 4.6e-1 0.019 4.7e-1 23 Click to see details
GSE38226 Liver fibrosis 0.01 4.8e-1 -0.012 4.8e-1 21 Click to see details
GSE38226 Liver fibrosis 0.01 4.8e-1 -0.012 4.8e-1 21 Click to see details
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
243 hsa-miR-646 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT061535 BTG2 BTG anti-proliferation factor 2 2 4
MIRT064692 CCND2 cyclin D2 2 4
MIRT068834 FNDC3A fibronectin type III domain containing 3A 2 10
MIRT079080 BIRC5 baculoviral IAP repeat containing 5 2 6
MIRT092735 SETD5 SET domain containing 5 2 4
MIRT093692 PI4K2B phosphatidylinositol 4-kinase type 2 beta 2 6
MIRT096244 CANX calnexin 2 2
MIRT096296 SQSTM1 sequestosome 1 2 4
MIRT098839 PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase 2 2
MIRT100229 PRR3 proline rich 3 2 4
MIRT156479 ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex subunit C3 (subunit 9) 2 2
MIRT186378 PNRC2 proline rich nuclear receptor coactivator 2 2 2
MIRT196460 TAOK1 TAO kinase 1 2 2
MIRT211252 FGF2 fibroblast growth factor 2 2 2
MIRT215233 NPM1 nucleophosmin 1 2 4
MIRT215383 CREBRF CREB3 regulatory factor 2 2
MIRT224972 BAG4 BCL2 associated athanogene 4 2 4
MIRT235598 KIF3B kinesin family member 3B 2 2
MIRT249860 CHAC1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 2 2
MIRT258407 FOXK1 forkhead box K1 2 2
MIRT269359 WEE1 WEE1 G2 checkpoint kinase 2 4
MIRT310455 REST RE1 silencing transcription factor 2 2
MIRT314057 PIK3R1 phosphoinositide-3-kinase regulatory subunit 1 2 8
MIRT322288 SLC39A14 solute carrier family 39 member 14 2 2
MIRT326311 OCRL OCRL, inositol polyphosphate-5-phosphatase 2 2
MIRT329703 SCD stearoyl-CoA desaturase 2 2
MIRT341278 PABPN1 poly(A) binding protein nuclear 1 2 3
MIRT403798 AKIRIN1 akirin 1 2 2
MIRT438549 NOB1 NIN1/PSMD8 binding protein 1 homolog 1 1
MIRT441908 SEPN1 selenoprotein N 2 2
MIRT444125 ZNRF3 zinc and ring finger 3 2 2
MIRT445458 EXT1 exostosin glycosyltransferase 1 2 4
MIRT446500 ASCC1 activating signal cointegrator 1 complex subunit 1 2 2
MIRT446538 GOLGA8B golgin A8 family member B 2 2
MIRT447770 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT448438 TLL1 tolloid like 1 2 2
MIRT448768 GOLGA8A golgin A8 family member A 2 2
MIRT460749 SRP14 signal recognition particle 14 2 2
MIRT461556 ACTR3B ARP3 actin related protein 3 homolog B 2 2
MIRT463163 ZNF367 zinc finger protein 367 2 10
MIRT464234 VEGFA vascular endothelial growth factor A 5 12
MIRT464496 UCK2 uridine-cytidine kinase 2 2 2
MIRT465157 TSC22D2 TSC22 domain family member 2 2 2
MIRT466429 TFAP2A transcription factor AP-2 alpha 2 8
MIRT467395 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT468672 SEC24A SEC24 homolog A, COPII coat complex component 2 4
MIRT469407 REL REL proto-oncogene, NF-kB subunit 2 6
MIRT470750 PNPLA6 patatin like phospholipase domain containing 6 2 2
MIRT471947 NR6A1 nuclear receptor subfamily 6 group A member 1 2 2
MIRT472468 NAPG NSF attachment protein gamma 2 12
MIRT474571 KLHDC3 kelch domain containing 3 2 2
MIRT477443 ELOVL5 ELOVL fatty acid elongase 5 2 2
MIRT480541 BZW1 basic leucine zipper and W2 domains 1 2 12
MIRT482110 AKT3 AKT serine/threonine kinase 3 2 4
MIRT485206 PRKAR2A protein kinase cAMP-dependent type II regulatory subunit alpha 2 8
MIRT492318 SETD1B SET domain containing 1B 2 4
MIRT497144 TAPBP TAP binding protein 2 2
MIRT498976 ORC4 origin recognition complex subunit 4 2 8
MIRT499112 SNRPB2 small nuclear ribonucleoprotein polypeptide B2 2 8
MIRT499448 ODF2L outer dense fiber of sperm tails 2 like 2 8
MIRT500089 L2HGDH L-2-hydroxyglutarate dehydrogenase 2 8
MIRT500317 ZNF622 zinc finger protein 622 2 8
MIRT500414 ZMAT3 zinc finger matrin-type 3 2 8
MIRT500572 USP53 ubiquitin specific peptidase 53 2 2
MIRT500596 UBN2 ubinuclein 2 2 10
MIRT500797 TLK1 tousled like kinase 1 2 8
MIRT500932 SRPR SRP receptor alpha subunit 2 6
MIRT500946 SREK1 splicing regulatory glutamic acid and lysine rich protein 1 2 8
MIRT501081 SMAD7 SMAD family member 7 2 8
MIRT501515 PPTC7 PTC7 protein phosphatase homolog 2 6
MIRT501879 MOB4 MOB family member 4, phocein 2 8
MIRT502195 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 8
MIRT502630 DDX3X DEAD-box helicase 3, X-linked 2 8
MIRT502650 DCTN5 dynactin subunit 5 2 8
MIRT502914 CDCA4 cell division cycle associated 4 2 8
MIRT502938 CDC37L1 cell division cycle 37 like 1 2 8
MIRT502987 CCND1 cyclin D1 6 3
MIRT503181 AGO2 argonaute 2, RISC catalytic component 2 6
MIRT504532 ZNF620 zinc finger protein 620 2 6
MIRT504715 DLC1 DLC1 Rho GTPase activating protein 2 6
MIRT504967 ZNRF2 zinc and ring finger 2 2 2
MIRT505073 ZFHX4 zinc finger homeobox 4 2 6
MIRT505109 YTHDC1 YTH domain containing 1 2 6
MIRT505342 TMEM245 transmembrane protein 245 2 6
MIRT505389 TMEM100 transmembrane protein 100 2 2
MIRT505681 SESTD1 SEC14 and spectrin domain containing 1 2 6
MIRT506162 PLAG1 PLAG1 zinc finger 2 8
MIRT506185 PHKA1 phosphorylase kinase regulatory subunit alpha 1 2 6
MIRT506354 NUP50 nucleoporin 50 2 6
MIRT506480 MYO5A myosin VA 2 6
MIRT506833 KIF23 kinesin family member 23 2 6
MIRT507310 FEM1B fem-1 homolog B 2 4
MIRT507847 CCNE2 cyclin E2 2 6
MIRT508670 DIABLO diablo IAP-binding mitochondrial protein 2 4
MIRT509137 ZNF691 zinc finger protein 691 2 4
MIRT509686 ATAD5 ATPase family, AAA domain containing 5 2 4
MIRT512205 C1orf21 chromosome 1 open reading frame 21 2 6
MIRT518087 TRIM35 tripartite motif containing 35 2 2
MIRT518990 NNT nicotinamide nucleotide transhydrogenase 2 4
MIRT520964 SPRED1 sprouty related EVH1 domain containing 1 2 2
MIRT521049 SLC2A3 solute carrier family 2 member 3 2 4
MIRT521192 SBNO1 strawberry notch homolog 1 2 6
MIRT521619 PSAT1 phosphoserine aminotransferase 1 2 6
MIRT522770 LAMTOR1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 2 2
MIRT533754 TMEM184B transmembrane protein 184B 2 2
MIRT534131 SNTB2 syntrophin beta 2 2 4
MIRT537159 GID8 GID complex subunit 8 homolog 2 2
MIRT537812 EFNB2 ephrin B2 2 4
MIRT538108 DDX6 DEAD-box helicase 6 2 2
MIRT540839 GNAT1 G protein subunit alpha transducin 1 2 4
MIRT541019 WIPI2 WD repeat domain, phosphoinositide interacting 2 2 2
MIRT541145 PISD phosphatidylserine decarboxylase 2 2
MIRT541387 CDC42SE2 CDC42 small effector 2 2 2
MIRT541422 CBX4 chromobox 4 2 2
MIRT543521 PRSS21 protease, serine 21 2 2
MIRT543794 RALGAPB Ral GTPase activating protein non-catalytic beta subunit 2 4
MIRT543831 GSG1 germ cell associated 1 2 2
MIRT544961 UGT2B4 UDP glucuronosyltransferase family 2 member B4 2 2
MIRT545182 MAP4K2 mitogen-activated protein kinase kinase kinase kinase 2 2 4
MIRT545343 CCDC83 coiled-coil domain containing 83 2 2
MIRT545367 LIN7C lin-7 homolog C, crumbs cell polarity complex component 2 2
MIRT545656 SPARC secreted protein acidic and cysteine rich 2 2
MIRT545678 DECR1 2,4-dienoyl-CoA reductase 1 2 2
MIRT545938 ZBTB44 zinc finger and BTB domain containing 44 2 4
MIRT546107 USP48 ubiquitin specific peptidase 48 2 4
MIRT546603 SALL1 spalt like transcription factor 1 2 4
MIRT546628 RTN4 reticulon 4 2 2
MIRT547321 NPTN neuroplastin 2 2
MIRT547660 KPNA3 karyopherin subunit alpha 3 2 2
MIRT547994 HCFC2 host cell factor C2 2 4
MIRT548048 GOLIM4 golgi integral membrane protein 4 2 2
MIRT548098 GFPT1 glutamine--fructose-6-phosphate transaminase 1 2 4
MIRT548721 CRK CRK proto-oncogene, adaptor protein 2 2
MIRT548938 CDK17 cyclin dependent kinase 17 2 2
MIRT549071 CACUL1 CDK2 associated cullin domain 1 2 2
MIRT549272 ASH1L ASH1 like histone lysine methyltransferase 2 2
MIRT549438 ACTR2 ARP2 actin related protein 2 homolog 2 2
MIRT550462 OSCAR osteoclast associated, immunoglobulin-like receptor 2 4
MIRT550794 WARS2 tryptophanyl tRNA synthetase 2, mitochondrial 2 2
MIRT550819 FAM229B family with sequence similarity 229 member B 2 2
MIRT551537 EMB embigin 2 2
MIRT552031 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT552340 ZNF704 zinc finger protein 704 2 2
MIRT552444 ZNF449 zinc finger protein 449 2 2
MIRT553116 UBR3 ubiquitin protein ligase E3 component n-recognin 3 (putative) 2 2
MIRT553448 TOX4 TOX high mobility group box family member 4 2 2
MIRT553725 TBX18 T-box 18 2 2
MIRT553805 SZRD1 SUZ RNA binding domain containing 1 2 4
MIRT554696 RNF149 ring finger protein 149 2 2
MIRT554831 RECK reversion inducing cysteine rich protein with kazal motifs 2 2
MIRT555139 PTPRD protein tyrosine phosphatase, receptor type D 2 2
MIRT555269 PRDM4 PR/SET domain 4 2 2
MIRT555312 PPP2R5C protein phosphatase 2 regulatory subunit B'gamma 2 4
MIRT555558 PLEKHA1 pleckstrin homology domain containing A1 2 2
MIRT556379 LURAP1L leucine rich adaptor protein 1 like 2 2
MIRT556669 KMT2D lysine methyltransferase 2D 2 4
MIRT556853 KANK1 KN motif and ankyrin repeat domains 1 2 4
MIRT557476 GPR27 G protein-coupled receptor 27 2 4
MIRT558361 DMTF1 cyclin D binding myb like transcription factor 1 2 2
MIRT558385 DHX33 DEAH-box helicase 33 2 2
MIRT558502 CYP26B1 cytochrome P450 family 26 subfamily B member 1 2 4
MIRT558515 CTDSPL CTD small phosphatase like 2 4
MIRT558583 CREBL2 cAMP responsive element binding protein like 2 2 4
MIRT558641 CNNM2 cyclin and CBS domain divalent metal cation transport mediator 2 2 2
MIRT558653 CNKSR3 CNKSR family member 3 2 2
MIRT558865 CD2AP CD2 associated protein 2 2
MIRT558888 CCNE1 cyclin E1 2 4
MIRT559002 CA8 carbonic anhydrase 8 2 2
MIRT559149 BTN3A3 butyrophilin subfamily 3 member A3 2 2
MIRT559999 RAB3IP RAB3A interacting protein 2 2
MIRT562023 LANCL1 LanC like 1 2 2
MIRT562474 CNOT6L CCR4-NOT transcription complex subunit 6 like 2 2
MIRT562586 CBX2 chromobox 2 2 2
MIRT562595 CAPZA2 capping actin protein of muscle Z-line alpha subunit 2 2 2
MIRT562873 KIAA1456 KIAA1456 2 2
MIRT562989 KIAA0408 KIAA0408 2 4
MIRT563082 SLC25A12 solute carrier family 25 member 12 2 2
MIRT563499 DLGAP3 DLG associated protein 3 2 2
MIRT563892 RAPH1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 2 2
MIRT564328 CCNT1 cyclin T1 2 2
MIRT564945 XKR7 XK related 7 2 2
MIRT564981 WNK3 WNK lysine deficient protein kinase 3 2 2
MIRT566302 PPM1A protein phosphatase, Mg2+/Mn2+ dependent 1A 2 2
MIRT566701 MTMR3 myotubularin related protein 3 2 2
MIRT566827 MAP3K7 mitogen-activated protein kinase kinase kinase 7 2 2
MIRT571236 SCAMP4 secretory carrier membrane protein 4 2 2
MIRT571424 RIF1 replication timing regulatory factor 1 2 2
MIRT571637 SKI SKI proto-oncogene 2 2
MIRT571836 NUFIP2 NUFIP2, FMR1 interacting protein 2 2 2
MIRT571962 KIF5B kinesin family member 5B 2 2
MIRT572104 DYNLL2 dynein light chain LC8-type 2 2 2
MIRT572183 CDK6 cyclin dependent kinase 6 2 2
MIRT572720 RBL1 RB transcriptional corepressor like 1 2 2
MIRT574589 N4BP1 NEDD4 binding protein 1 2 2
MIRT575878 Cask calcium/calmodulin-dependent serine protein kinase (MAGUK family) 2 3
MIRT609979 HERPUD2 HERPUD family member 2 2 2
MIRT612932 GPRIN3 GPRIN family member 3 2 2
MIRT614327 C1orf220 chromosome 1 open reading frame 220 2 2
MIRT614694 TRAK1 trafficking kinesin protein 1 2 2
MIRT618328 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT618456 ZFP30 ZFP30 zinc finger protein 2 4
MIRT621135 EMC7 ER membrane protein complex subunit 7 2 4
MIRT622878 PDE12 phosphodiesterase 12 2 4
MIRT631163 CCBE1 collagen and calcium binding EGF domains 1 2 2
MIRT632793 KREMEN1 kringle containing transmembrane protein 1 2 2
MIRT636731 AFAP1 actin filament associated protein 1 2 2
MIRT649297 IRF8 interferon regulatory factor 8 2 2
MIRT650955 QPCTL glutaminyl-peptide cyclotransferase like 2 2
MIRT653267 SOGA3 SOGA family member 3 2 2
MIRT654665 PSMG1 proteasome assembly chaperone 1 2 2
MIRT656180 MPRIP myosin phosphatase Rho interacting protein 2 2
MIRT659252 CUL3 cullin 3 2 2
MIRT663826 NLRP12 NLR family pyrin domain containing 12 2 4
MIRT676632 CSNK1E casein kinase 1 epsilon 2 2
MIRT679503 ZNF106 zinc finger protein 106 2 2
MIRT680978 DCAF17 DDB1 and CUL4 associated factor 17 2 2
MIRT682272 RS1 retinoschisin 1 2 2
MIRT682421 OLR1 oxidized low density lipoprotein receptor 1 2 2
MIRT682510 GLP2R glucagon like peptide 2 receptor 2 2
MIRT693926 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 2 2
MIRT700660 PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 2 2
MIRT700740 PLEKHA8 pleckstrin homology domain containing A8 2 2
MIRT702871 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 2
MIRT703192 GPBP1 GC-rich promoter binding protein 1 2 2
MIRT704453 CSNK2A1 casein kinase 2 alpha 1 2 2
MIRT704709 CHEK1 checkpoint kinase 1 2 2
MIRT706164 CASK calcium/calmodulin dependent serine protein kinase 2 3
MIRT713334 DNAJC28 DnaJ heat shock protein family (Hsp40) member C28 2 2
MIRT713416 SLC35E2B solute carrier family 35 member E2B 2 2
MIRT716300 PAX1 paired box 1 2 2
MIRT717394 PTPRF protein tyrosine phosphatase, receptor type F 2 2
MIRT718453 BTNL9 butyrophilin like 9 2 2
MIRT718728 VWA9 integrator complex subunit 14 2 2
MIRT719029 SHROOM3 shroom family member 3 2 2
MIRT720367 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT723120 ZSCAN16 zinc finger and SCAN domain containing 16 2 2
MIRT733741 EGFR epidermal growth factor receptor 4 0
MIRT734281 HIF1A hypoxia inducible factor 1 alpha subunit 3 0
MIRT735934 EYA3 EYA transcriptional coactivator and phosphatase 3 3 0
MIRT755830 IGF1 insulin like growth factor 1 5 1
MIRT755831 BCL2 BCL2, apoptosis regulator 4 1
MIRT755832 CDK2 cyclin dependent kinase 2 4 1
MIRT755833 BAX BCL2 associated X, apoptosis regulator 4 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-646 Fluorouracil 3385 NSC19893 approved resistant cell line (OE19)
hsa-miR-646 Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM16)
hsa-miR-646 Vemurafenib 42611257 NSC761431 approved sensitive cell line (LM43)
hsa-miR-646 Sunitinib 5329102 NSC750690 approved resistant tissue (CardB)
hsa-miR-646 Oxaliplatin 6857599 NSC266046 approved sensitive cell line (IGROV-1)
hsa-miR-646 Cisplatin 5460033 NSC119875 approved sensitive cell line (IGROV-1)
hsa-miR-646 Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-646 Cisplatin 5460033 NSC119875 approved sensitive cell line (H460)

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