miRTarBase - #MIRT404223


—
pre-miRNA Information
pre-miRNA hsa-mir-4323   
Genomic Coordinates chr19: 42133445 - 42133513
Description Homo sapiens miR-4323 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4323
Sequence 42| CAGCCCCACAGCCUCAGA |59
Evidence Experimental
Experiments SOLiD
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs549311114 1 dbSNP
rs896027609 6 dbSNP
rs1057502968 11 dbSNP
rs773276005 11 dbSNP
rs1454618841 12 dbSNP
Putative Targets

miRNA Expression profile
Human miRNA Tissue Atlas
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol RPL7L1   
Synonyms dJ475N16.4
Description ribosomal protein L7 like 1
Transcript NM_198486   
Expression
Putative miRNA Targets on RPL7L1
3'UTR of RPL7L1
(miRNA target sites are highlighted)		 
>RPL7L1|NM_198486|3'UTR
   1 ACCCAGGTGCCAAACTGCGGTAAATTTTTTATCAGTGAAGTGGAAGCATGTGTTTTGTTTTGGAAATTTTTATCAAGTAT
  81 CTTCAGAGAAGATTATTTCCTGCTTTATCTTCAGAAACTGGAAAGGGTCAAAGAAAAGACAGTAGCTGGCCGGTCGTGGT
 161 GGCTCATGCCTGTAATCCCAACACTTAGGGAGGCTGAGGTGGGCAGATCACCTGAGGTTGGGAGTTCGAGACCAGCCTGA
 241 CCAACATGGAGAAATGCCATCTCTACTAAAAATACAAAAATTAGCCGGGCATGGTGGCACGTGCCTGTAATCCCAGCTAC
 321 TCAGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAAGTTGCAGTGAGCTGAGATCACGCCATTGCACTCCA
 401 GCCTGGGCAACAAGCGAAACTCTGTCTCAAAAAAAAAGAAAAGACAGTAGCATATGTTCATGTCAAGCACCTCTCATCAC
 481 AGTCGAGTTCCAAGGAAAAATTCCAGCGTTTTCTGCATTGGGTGCTGTGTCATCTGAAATCGGCACATTCCATGGAGGAA
 561 GGAGTCCTGCTTTGTTGCATGTATCCTAGGGTTTAATGTTGGTAAATGAGTCACTCTAGCATTTGTAGAAGGCTCCCTGA
 641 GACTCCTGCAGCAGTCGACCAAGCCCAAGGACATAATTGAATCTGGAGAGTCCTGGGGCCTTGTTTTGAAAAAGACTTGA
 721 AATACACATAGGAAGAAAGGCATAAAAATAAATGTTCACTTGTCTCTGCTGTGAGTATGTGTTCCAACTTTTCAGTGATG
 801 GCTTTGAGAATTCTCAAACTTGACTGGCTCTAAGTGTATCTGGTGGCTTTTGTATCGTAACCTGAAACTGGCTTAGTACT
 881 TTTTCCTAAAAGCTCAGGATTTGAGAATGAGGACCCCTTCGCCAGGAAAACATGTATACACTCAAAATTTTGCTTGCAGT
 961 TCTAGGGTGTTTAGACCCTTCTCAGATACCTGTGCATCTTATGGGTTTTGTTTTTCTCTTTGAGACAGTCTCACCCTGTT
1041 GCCCAGGCTGGAGCGCAGTGGCATGATCTCAGCTCATTGCAGCCTCCACCTCCTGGGTTCAAGTGATTCTGCCTCAGCCC
1121 CTTGATCAGCTGGGATTACATGCATGTACCACCACACCCAGCTAATTCTTGTATTTTTAGTAGAGATGGAGACAGAGTTT
1201 CACCATGTAGGCCAGGCTAGTCTCAAACTCCTGACCTCAAGTGATCCACAAGCCTGGGCCTCCCAAAGTGCTGGGATTAC
1281 AGGCATGAGCAACTGCGCCCAGCTCTTGTGTACCTTATGTGAGGAAGTCCTGCTCAATCAGGATCGGTCACGCAGGCCCT
1361 GATCTTGCTACTCTGGTTCCATGTCCTATGGAAGACCAAAGTTTACCAAGATAGATTTTTCCCTTCATAGTGGCAGATAG
1441 TGTTAACCCCTGCACCATCTGTAACTCAGAAATCCCCACCATTTCTTCCCCTGGGCTTCAGAATAGAATTGCCTGGTTTC
1521 TCTGATGATCAGCATGGTTCCTTAAAACCCAAATCAGCAAGGAATGAACAATTTTGTTTGGCATGGATGAAATTAGCACT
1601 GTTTGGCTCGTTAGGCCCCAGGCAGGCAGGCACCTTAATTTTTTCCTTGCATATTCTAGTCTTCAGAAGCATTGCCTTTT
1681 GTCCTACTGGTAGTGACATAGACCAATAACAGGGCATCTGGGGATTTTAATCCTGAAAACAGTGAGTCTGATACTGCTTG
1761 TGTTTTTCATCAGTGTCCACCCCAAGTGGGTCTTCCTGCTATTCTCTTCACTTAGTTGCCCCTCACTTGCCATCTGAGCA
1841 ATTGGCAAGGATGTGCCAGGCCTAGGTTAAACTTGGAAACATGCTTGACCATTCTATTCCCTGGTCCTTTAAGATCAGTT
1921 TGGCTGCAATTTTGGCTCCTTGGACCCTCAAGCATAGCTGGTAAATCAAGTTAGAGATGTAACTGCCTTAAAACATGCCA
2001 GCTTAGGCTGGGCACGGTGGCTCACACCTGTAATCTCAACACTTCAGGAGGCTGAGGCAGGCAGATCACTTGAGGTCAGG
2081 AGTTCGAGACCAGCCTGACCAACATGGAGAAATTCTGTCCCTACTGAAAATACAAAATTAGCCGGATGTGGTGGTGCATG
2161 CCTGTAATCCCAGCTACTTGGGAGGCTGAGGCAAGAGAATTGCTTGAACCCAGGGAGGCAGAGGTTGCAGTGAGCCGAGA
2241 TCACACCATTGCACTCCACCTTGGGCAACAAAAGCAAAACTCTGTCTCAAAAAAAAAAAAAAAAAAAGTGCCAGCGTATG
2321 AGGTAATTAGATTGGTTCTCTCCAGAGGTAACCTGCCAAGAAGAGATGCTATAGATGTTACTCCTATACTGTAAAACATT
2401 GTGAAATCAGATTACTTTAAAATGATGTATTACAAAGTTATGCAAAAAAGCAGTTGTGACTATGGAAGCCCAAGGCTTAT
2481 ATCCCAGCTCTGTCTTACACTAAATATGGGTACAGTGTTTCCACTCTGTCCATAAAATGGGAGCTAATATTCTCCAACCT
2561 GTGTGCCTGACATGATGGTTAAAGGGATTAAACAAAACAATAGTTTGTAATTTATTCTGTCAGAGCAAACTGCTGGTAAA
2641 TAAAAGGGACTAAGTTGACGAAAAATAAATTTTAAAAAACCTAATAAAACAAGTTTGTAATTTATAATTGTATACAAATA
2721 AAAGATGTTACAAAAATTGCGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' agaCUC-CGACACCCCGac 5'
             ||| |:  ||||||  
Target 5' ctgGAGAGTCCTGGGGCct 3'
 683 - 701 127.00 -14.00
2 
miRNA  3' agACU--CCGACACC-CCGAc 5'
            ||:  ||: |||| |||| 
Target 5' gcTGGCCGGTCGTGGTGGCTc 3'
 145 - 165 122.00 -17.90
3 
miRNA  3' agacUCCG-ACACCCCGAc 5'
              :||| | ||||| | 
Target 5' aacaGGGCATCTGGGGATt 3'
 1708 - 1726 118.00 -12.12
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31543366 25 COSMIC
COSN30543175 57 COSMIC
COSN24398051 105 COSMIC
COSN4927839 145 COSMIC
COSN20916954 546 COSMIC
COSN26058719 2315 COSMIC
COSN29761685 2692 COSMIC
COSN31579758 2934 COSMIC
COSN8514359 2978 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs753639852 3 dbSNP
rs1273477659 5 dbSNP
rs754849525 8 dbSNP
rs1193927586 13 dbSNP
rs778656414 17 dbSNP
rs747813131 18 dbSNP
rs1456696554 24 dbSNP
rs1295697384 25 dbSNP
rs1206278655 27 dbSNP
rs757911517 31 dbSNP
rs1254101453 41 dbSNP
rs1474295366 47 dbSNP
rs1164264530 52 dbSNP
rs546862778 56 dbSNP
rs888311042 58 dbSNP
rs1313362897 61 dbSNP
rs140957955 68 dbSNP
rs529077109 72 dbSNP
rs184556372 83 dbSNP
rs900508258 94 dbSNP
rs1372043335 97 dbSNP
rs1161236637 105 dbSNP
rs1423453789 106 dbSNP
rs996135166 115 dbSNP
rs1275234534 117 dbSNP
rs189314695 124 dbSNP
rs1208246643 132 dbSNP
rs1246234988 138 dbSNP
rs1484219727 154 dbSNP
rs1010378802 157 dbSNP
rs1221952354 167 dbSNP
rs1020851650 171 dbSNP
rs1466693619 172 dbSNP
rs537910701 176 dbSNP
rs968940955 189 dbSNP
rs1236932098 190 dbSNP
rs1315105745 196 dbSNP
rs551188238 197 dbSNP
rs1287592253 198 dbSNP
rs1228808375 203 dbSNP
rs571185291 204 dbSNP
rs1300916705 209 dbSNP
rs927034499 212 dbSNP
rs1390969129 217 dbSNP
rs1294828597 227 dbSNP
rs1450939084 228 dbSNP
rs1363761198 234 dbSNP
rs1471976553 241 dbSNP
rs1473784304 248 dbSNP
rs1427708931 249 dbSNP
rs958326921 252 dbSNP
rs992508549 254 dbSNP
rs533594680 255 dbSNP
rs1203488725 256 dbSNP
rs1485560224 257 dbSNP
rs1157859671 258 dbSNP
rs917151416 259 dbSNP
rs1385788880 260 dbSNP
rs1383862458 261 dbSNP
rs1331353364 268 dbSNP
rs1302906919 270 dbSNP
rs929864947 287 dbSNP
rs1387205691 293 dbSNP
rs1339685116 300 dbSNP
rs1459347153 302 dbSNP
rs1445472640 303 dbSNP
rs1176221946 304 dbSNP
rs553629111 311 dbSNP
rs1379617406 313 dbSNP
rs1356385536 317 dbSNP
rs909699076 323 dbSNP
rs372235156 334 dbSNP
rs1248783501 357 dbSNP
rs150375266 370 dbSNP
rs528472688 384 dbSNP
rs575455643 385 dbSNP
rs1278490351 389 dbSNP
rs1441071254 392 dbSNP
rs931954250 399 dbSNP
rs9471940 400 dbSNP
rs1052215666 401 dbSNP
rs1436615793 402 dbSNP
rs1381251734 404 dbSNP
rs890483114 407 dbSNP
rs1415404885 409 dbSNP
rs1138999 410 dbSNP
rs1010889114 415 dbSNP
rs564463616 423 dbSNP
rs1409132578 424 dbSNP
rs1454853776 428 dbSNP
rs1170593812 430 dbSNP
rs1159094648 432 dbSNP
rs192495885 446 dbSNP
rs904654220 451 dbSNP
rs185106057 454 dbSNP
rs1442924111 463 dbSNP
rs370179776 477 dbSNP
rs1139003 480 dbSNP
rs1193828386 487 dbSNP
rs1412660212 489 dbSNP
rs1000375280 491 dbSNP
rs1314568191 498 dbSNP
rs1356556404 502 dbSNP
rs1375827961 504 dbSNP
rs1449473365 507 dbSNP
rs1034073127 508 dbSNP
rs371493395 509 dbSNP
rs1371439128 516 dbSNP
rs1409551906 516 dbSNP
rs1170649794 517 dbSNP
rs1422838211 524 dbSNP
rs1337644029 528 dbSNP
rs796795164 529 dbSNP
rs958464018 529 dbSNP
rs1214079438 530 dbSNP
rs1321220540 530 dbSNP
rs1228172832 531 dbSNP
rs1364564888 531 dbSNP
rs59680080 531 dbSNP
rs745953032 531 dbSNP
rs879000823 531 dbSNP
rs1274300667 532 dbSNP
rs367718390 532 dbSNP
rs1343572370 533 dbSNP
rs1403411733 535 dbSNP
rs1349485065 540 dbSNP
rs992602767 541 dbSNP
rs1024378657 542 dbSNP
rs189088217 542 dbSNP
rs1472148427 543 dbSNP
rs1184069399 544 dbSNP
rs983102633 544 dbSNP
rs1213626976 545 dbSNP
rs796481546 546 dbSNP
rs796707773 546 dbSNP
rs1330426622 547 dbSNP
rs1281508455 548 dbSNP
rs1290641173 549 dbSNP
rs1433467069 549 dbSNP
rs1204038330 550 dbSNP
rs1247916448 551 dbSNP
rs1222043409 555 dbSNP
rs1420476416 556 dbSNP
rs909802852 558 dbSNP
rs181031198 562 dbSNP
rs1324700179 565 dbSNP
rs1376574321 571 dbSNP
rs975228885 584 dbSNP
rs921994945 586 dbSNP
rs978040612 590 dbSNP
rs1412506684 592 dbSNP
rs34502273 592 dbSNP
rs70990157 592 dbSNP
rs1428823143 593 dbSNP
rs1306427735 596 dbSNP
rs932047765 597 dbSNP
rs1478800824 598 dbSNP
rs186216008 599 dbSNP
rs1323042228 600 dbSNP
rs1187354340 605 dbSNP
rs531542602 606 dbSNP
rs1270525699 608 dbSNP
rs1208504104 615 dbSNP
rs551450009 621 dbSNP
rs1279618193 625 dbSNP
rs1221208318 629 dbSNP
rs1360123767 631 dbSNP
rs946073669 635 dbSNP
rs1042331122 639 dbSNP
rs571303952 649 dbSNP
rs1304753511 651 dbSNP
rs751858989 655 dbSNP
rs1445565414 658 dbSNP
rs755148795 667 dbSNP
rs1062253 675 dbSNP
rs1415861683 681 dbSNP
rs1387914090 684 dbSNP
rs1167442940 694 dbSNP
rs527260206 697 dbSNP
rs1196008335 698 dbSNP
rs1266074778 703 dbSNP
rs1180564288 705 dbSNP
rs1238476837 708 dbSNP
rs1483201239 708 dbSNP
rs1466700117 709 dbSNP
rs1195458389 714 dbSNP
rs1340361746 714 dbSNP
rs189930803 721 dbSNP
rs894676507 722 dbSNP
rs1014413788 723 dbSNP
rs1024098285 735 dbSNP
rs1378309742 740 dbSNP
rs951080264 740 dbSNP
rs1303263300 751 dbSNP
rs982477146 751 dbSNP
rs16897408 754 dbSNP
rs1449897857 761 dbSNP
rs1016777031 766 dbSNP
rs1306953940 769 dbSNP
rs1429842505 771 dbSNP
rs1391542293 774 dbSNP
rs962619145 775 dbSNP
rs1423782137 778 dbSNP
rs1415127703 789 dbSNP
rs975324210 792 dbSNP
rs3205139 804 dbSNP
rs1251381868 805 dbSNP
rs1206214891 811 dbSNP
rs1484159133 815 dbSNP
rs748226990 818 dbSNP
rs1263800435 823 dbSNP
rs1244132062 825 dbSNP
rs1321072750 830 dbSNP
rs1448771985 835 dbSNP
rs921081968 838 dbSNP
rs113105795 842 dbSNP
rs3209048 846 dbSNP
rs1462698829 858 dbSNP
rs1162819025 901 dbSNP
rs1371984252 901 dbSNP
rs911989991 904 dbSNP
rs1351005445 906 dbSNP
rs1443127544 909 dbSNP
rs1326632135 910 dbSNP
rs1411781119 912 dbSNP
rs1183314666 913 dbSNP
rs78328628 914 dbSNP
rs535719765 917 dbSNP
rs1365150597 918 dbSNP
rs1265472968 921 dbSNP
rs1209352943 925 dbSNP
rs1488810838 926 dbSNP
rs946011020 931 dbSNP
rs1215545824 935 dbSNP
rs1326990455 936 dbSNP
rs1267307909 943 dbSNP
rs1433526825 945 dbSNP
rs1298268312 946 dbSNP
rs879438778 952 dbSNP
rs1041739792 957 dbSNP
rs200455142 964 dbSNP
rs1308392844 965 dbSNP
rs1337184145 966 dbSNP
rs1227713690 967 dbSNP
rs925968515 972 dbSNP
rs1332062035 976 dbSNP
rs1327331650 977 dbSNP
rs1456155082 990 dbSNP
rs555645263 996 dbSNP
rs1253047801 998 dbSNP
rs1056092986 1000 dbSNP
rs1464432112 1010 dbSNP
rs1184647710 1012 dbSNP
rs894645256 1025 dbSNP
rs1186717988 1030 dbSNP
rs1463524143 1032 dbSNP
rs1428851597 1034 dbSNP
rs1164371394 1035 dbSNP
rs1232166632 1038 dbSNP
rs368046208 1041 dbSNP
rs1305059872 1043 dbSNP
rs1463178045 1052 dbSNP
rs1045858657 1058 dbSNP
rs1321734277 1059 dbSNP
rs538100936 1060 dbSNP
rs886874801 1062 dbSNP
rs1400588337 1067 dbSNP
rs1172353779 1068 dbSNP
rs558210498 1076 dbSNP
rs1452283877 1077 dbSNP
rs962380996 1082 dbSNP
rs1247344543 1089 dbSNP
rs996709289 1093 dbSNP
rs1028233430 1097 dbSNP
rs1199646657 1098 dbSNP
rs1395760724 1105 dbSNP
rs955351833 1106 dbSNP
rs1225552157 1109 dbSNP
rs986666094 1112 dbSNP
rs1297676009 1114 dbSNP
rs1234733350 1118 dbSNP
rs1339195029 1118 dbSNP
rs1333979410 1120 dbSNP
rs578062137 1126 dbSNP
rs911942497 1127 dbSNP
rs1377531722 1128 dbSNP
rs967471303 1130 dbSNP
rs1429197385 1131 dbSNP
rs1390940514 1146 dbSNP
rs1169696090 1152 dbSNP
rs1476381362 1154 dbSNP
rs540733251 1156 dbSNP
rs1186617191 1160 dbSNP
rs1262365675 1173 dbSNP
rs925937426 1174 dbSNP
rs1259199357 1179 dbSNP
rs936026554 1180 dbSNP
rs1482520509 1187 dbSNP
rs1274784171 1196 dbSNP
rs9394929 1197 dbSNP
rs916172500 1198 dbSNP
rs1284079761 1204 dbSNP
rs1245988267 1207 dbSNP
rs1188855801 1208 dbSNP
rs1357691213 1212 dbSNP
rs34514785 1218 dbSNP
rs1411336602 1222 dbSNP
rs1417360225 1223 dbSNP
rs1286845633 1231 dbSNP
rs1161944553 1232 dbSNP
rs1371379137 1234 dbSNP
rs1331008065 1241 dbSNP
rs1403637798 1243 dbSNP
rs950234240 1245 dbSNP
rs1162525400 1249 dbSNP
rs377089896 1253 dbSNP
rs1045915881 1259 dbSNP
rs1465953722 1269 dbSNP
rs1472087961 1270 dbSNP
rs1183390709 1271 dbSNP
rs887296243 1271 dbSNP
rs1449303803 1275 dbSNP
rs1377591740 1280 dbSNP
rs574083593 1299 dbSNP
rs202001012 1303 dbSNP
rs1372006917 1313 dbSNP
rs1266683889 1318 dbSNP
rs1038117094 1320 dbSNP
rs898160940 1326 dbSNP
rs996478926 1327 dbSNP
rs1028169756 1332 dbSNP
rs1317512150 1345 dbSNP
rs1209315969 1346 dbSNP
rs1324281009 1347 dbSNP
rs1277946804 1351 dbSNP
rs542900634 1359 dbSNP
rs1486494364 1363 dbSNP
rs1396566599 1365 dbSNP
rs1211906736 1371 dbSNP
rs1456472622 1373 dbSNP
rs1408266848 1375 dbSNP
rs955337717 1376 dbSNP
rs1008587745 1380 dbSNP
rs1193693301 1380 dbSNP
rs562813405 1380 dbSNP
rs966981180 1387 dbSNP
rs1246691820 1389 dbSNP
rs373772494 1414 dbSNP
rs1208498519 1422 dbSNP
rs879672819 1422 dbSNP
rs1179066763 1430 dbSNP
rs1217759730 1438 dbSNP
rs1408802819 1449 dbSNP
rs1275564424 1453 dbSNP
rs1443130494 1467 dbSNP
rs1433128728 1473 dbSNP
rs1172244257 1477 dbSNP
rs1397304320 1478 dbSNP
rs1318376790 1482 dbSNP
rs1345626936 1485 dbSNP
rs977501076 1488 dbSNP
rs1435672473 1500 dbSNP
rs1423973146 1505 dbSNP
rs1173755990 1514 dbSNP
rs1455146303 1525 dbSNP
rs1307780443 1528 dbSNP
rs1388873684 1533 dbSNP
rs1188551060 1546 dbSNP
rs1353598210 1547 dbSNP
rs1244235881 1555 dbSNP
rs1208430004 1566 dbSNP
rs1439559770 1574 dbSNP
rs1281252868 1582 dbSNP
rs926030717 1589 dbSNP
rs569506364 1598 dbSNP
rs1299438188 1606 dbSNP
rs531533764 1607 dbSNP
rs1233485715 1610 dbSNP
rs991500998 1611 dbSNP
rs916124356 1614 dbSNP
rs1349817022 1621 dbSNP
rs1234816161 1623 dbSNP
rs1368242354 1624 dbSNP
rs950311535 1625 dbSNP
rs1429677795 1626 dbSNP
rs1422205895 1630 dbSNP
rs1258503062 1633 dbSNP
rs544905515 1633 dbSNP
rs908700460 1635 dbSNP
rs1436356479 1637 dbSNP
rs940219946 1645 dbSNP
rs1346346306 1647 dbSNP
rs1233528728 1652 dbSNP
rs564979535 1655 dbSNP
rs138570521 1656 dbSNP
rs35886184 1668 dbSNP
rs1378250274 1669 dbSNP
rs932298160 1670 dbSNP
rs1416290767 1671 dbSNP
rs1306894038 1673 dbSNP
rs1368296635 1673 dbSNP
rs1255496882 1675 dbSNP
rs1049368056 1686 dbSNP
rs547491621 1691 dbSNP
rs890817480 1692 dbSNP
rs1405277909 1694 dbSNP
rs1419115033 1696 dbSNP
rs756662346 1696 dbSNP
rs566877585 1701 dbSNP
rs538574054 1703 dbSNP
rs1008138829 1718 dbSNP
rs1021330701 1722 dbSNP
rs902304106 1725 dbSNP
rs1481625375 1735 dbSNP
rs1407869571 1741 dbSNP
rs552431809 1744 dbSNP
rs565800205 1745 dbSNP
rs1234850332 1747 dbSNP
rs1348273091 1749 dbSNP
rs1439463361 1750 dbSNP
rs878875910 1753 dbSNP
rs957460038 1755 dbSNP
rs11558567 1761 dbSNP
rs1436442321 1765 dbSNP
rs1395826839 1770 dbSNP
rs1167593296 1771 dbSNP
rs1455916663 1775 dbSNP
rs1323288195 1777 dbSNP
rs3209050 1778 dbSNP
rs1373151840 1786 dbSNP
rs749761150 1787 dbSNP
rs1265413398 1795 dbSNP
rs991594225 1796 dbSNP
rs1467998401 1799 dbSNP
rs1253502313 1806 dbSNP
rs1215335627 1807 dbSNP
rs1326740996 1817 dbSNP
rs1259912212 1823 dbSNP
rs1239403951 1824 dbSNP
rs1318315394 1828 dbSNP
rs1269439770 1831 dbSNP
rs1439456054 1834 dbSNP
rs1372369874 1838 dbSNP
rs147979510 1839 dbSNP
rs971836058 1840 dbSNP
rs1388455838 1844 dbSNP
rs1289789723 1846 dbSNP
rs1455587741 1850 dbSNP
rs1376086272 1854 dbSNP
rs1175488329 1855 dbSNP
rs1454713007 1858 dbSNP
rs1395622497 1861 dbSNP
rs1195481769 1866 dbSNP
rs981713611 1867 dbSNP
rs908786756 1872 dbSNP
rs1216579054 1883 dbSNP
rs1260827254 1883 dbSNP
rs1486654285 1886 dbSNP
rs1273917940 1893 dbSNP
rs940156248 1896 dbSNP
rs1348051650 1899 dbSNP
rs1304984453 1904 dbSNP
rs1226897826 1909 dbSNP
rs1380814347 1910 dbSNP
rs1326338583 1915 dbSNP
rs569236566 1916 dbSNP
rs1384238234 1917 dbSNP
rs1400339239 1921 dbSNP
rs141655858 1923 dbSNP
rs932392658 1937 dbSNP
rs1049977830 1940 dbSNP
rs374276383 1945 dbSNP
rs1447635788 1947 dbSNP
rs1372380145 1950 dbSNP
rs1193669983 1969 dbSNP
rs1430024033 1970 dbSNP
rs1253804824 1972 dbSNP
rs1209792927 1975 dbSNP
rs150681517 1978 dbSNP
rs778383094 1982 dbSNP
rs1202350084 1985 dbSNP
rs181371923 1986 dbSNP
rs112992088 1987 dbSNP
rs1339134437 1988 dbSNP
rs574071285 1990 dbSNP
rs1293054163 1991 dbSNP
rs1415667832 1992 dbSNP
rs1000677699 1994 dbSNP
rs1032158377 1995 dbSNP
rs1187929242 1998 dbSNP
rs1395701464 1999 dbSNP
rs1168484437 2000 dbSNP
rs1463459312 2003 dbSNP
rs1419853553 2004 dbSNP
rs895008298 2008 dbSNP
rs1012995848 2009 dbSNP
rs1162254980 2020 dbSNP
rs1396019808 2025 dbSNP
rs1436662554 2025 dbSNP
rs1023508709 2027 dbSNP
rs971380869 2028 dbSNP
rs1324488336 2035 dbSNP
rs543092746 2036 dbSNP
rs1270519477 2042 dbSNP
rs1273001493 2044 dbSNP
rs1355132598 2050 dbSNP
rs1015825877 2054 dbSNP
rs554218409 2057 dbSNP
rs1286611247 2061 dbSNP
rs961591103 2064 dbSNP
rs1205094380 2070 dbSNP
rs556477422 2078 dbSNP
rs1330941030 2086 dbSNP
rs1393117555 2087 dbSNP
rs1392144067 2090 dbSNP
rs1163989913 2091 dbSNP
rs974327417 2097 dbSNP
rs576295493 2100 dbSNP
rs1282713966 2101 dbSNP
rs920088020 2102 dbSNP
rs1469301471 2105 dbSNP
rs1449218592 2106 dbSNP
rs1232990398 2111 dbSNP
rs1183321285 2112 dbSNP
rs1217011959 2114 dbSNP
rs954251189 2119 dbSNP
rs985189346 2126 dbSNP
rs1055969 2129 dbSNP
rs912308999 2135 dbSNP
rs1337481281 2139 dbSNP
rs1474710037 2140 dbSNP
rs1223471715 2141 dbSNP
rs943690144 2143 dbSNP
rs1281375285 2148 dbSNP
rs1231115468 2162 dbSNP
rs1325076859 2164 dbSNP
rs1368710007 2164 dbSNP
rs200085968 2165 dbSNP
rs1419429447 2166 dbSNP
rs545307294 2167 dbSNP
rs916356123 2169 dbSNP
rs1475219935 2171 dbSNP
rs1396497252 2177 dbSNP
rs923625097 2178 dbSNP
rs1157458593 2190 dbSNP
rs936557897 2212 dbSNP
rs1053735956 2213 dbSNP
rs1194878238 2216 dbSNP
rs1395022250 2216 dbSNP
rs894975670 2222 dbSNP
rs564902487 2230 dbSNP
rs1044450464 2240 dbSNP
rs1447834903 2242 dbSNP
rs1374559760 2258 dbSNP
rs1413170061 2277 dbSNP
rs907291796 2289 dbSNP
rs1295311557 2297 dbSNP
rs9462843 2298 dbSNP
rs1373061653 2299 dbSNP
rs1015998615 2300 dbSNP
rs9462844 2301 dbSNP
rs1284833908 2308 dbSNP
rs995712693 2313 dbSNP
rs1173691688 2321 dbSNP
rs1455986230 2335 dbSNP
rs560695596 2336 dbSNP
rs1417947103 2343 dbSNP
rs1027197375 2348 dbSNP
rs1224814341 2349 dbSNP
rs1475915704 2366 dbSNP
rs1280084106 2367 dbSNP
rs1186158463 2368 dbSNP
rs1484858189 2373 dbSNP
rs954177145 2375 dbSNP
rs529619359 2384 dbSNP
rs1313910179 2386 dbSNP
rs912290037 2396 dbSNP
rs549399620 2400 dbSNP
rs1362467121 2401 dbSNP
rs1271683131 2408 dbSNP
rs140118329 2421 dbSNP
rs1354379167 2425 dbSNP
rs1180553140 2430 dbSNP
rs1312993294 2436 dbSNP
rs1435972368 2442 dbSNP
rs775372267 2457 dbSNP
rs185899578 2463 dbSNP
rs145438368 2470 dbSNP
rs190653372 2476 dbSNP
rs1053663208 2482 dbSNP
rs1186225776 2490 dbSNP
rs1475014433 2496 dbSNP
rs1258441172 2500 dbSNP
rs1159005723 2501 dbSNP
rs916506764 2506 dbSNP
rs1432582795 2511 dbSNP
rs534443959 2515 dbSNP
rs113487571 2519 dbSNP
rs1259779367 2520 dbSNP
rs906397992 2524 dbSNP
rs1391038979 2530 dbSNP
rs1003363609 2531 dbSNP
rs181858040 2540 dbSNP
rs1416234467 2546 dbSNP
rs1337553076 2549 dbSNP
rs1297072456 2559 dbSNP
rs1240396313 2568 dbSNP
rs1356734880 2571 dbSNP
rs187579202 2573 dbSNP
rs995475838 2577 dbSNP
rs556565509 2580 dbSNP
rs1027164739 2581 dbSNP
rs576405920 2586 dbSNP
rs1407413107 2587 dbSNP
rs954312572 2591 dbSNP
rs1480937701 2601 dbSNP
rs1237009400 2602 dbSNP
rs1281489270 2609 dbSNP
rs373592669 2611 dbSNP
rs538511559 2616 dbSNP
rs560013313 2619 dbSNP
rs558824104 2627 dbSNP
rs1246590465 2635 dbSNP
rs1314736938 2638 dbSNP
rs1007164775 2641 dbSNP
rs1438999853 2642 dbSNP
rs1379766977 2657 dbSNP
rs367715445 2659 dbSNP
rs1020187068 2679 dbSNP
rs965607523 2687 dbSNP
rs978242502 2688 dbSNP
rs1030756670 2690 dbSNP
rs1175358641 2691 dbSNP
rs1363400116 2702 dbSNP
rs11558575 2704 dbSNP
rs1377976650 2705 dbSNP
rs573432826 2706 dbSNP
rs916476123 2715 dbSNP
rs1055972 2716 dbSNP
rs1253442437 2723 dbSNP
rs1211358926 2729 dbSNP
rs1484705659 2732 dbSNP
rs1259710292 2736 dbSNP
rs1215898569 2758 dbSNP
rs947953854 2761 dbSNP
rs982086786 2775 dbSNP
rs927787090 2776 dbSNP
rs1372301513 2777 dbSNP
rs1134325 2782 dbSNP
rs1380821509 2782 dbSNP
rs940538213 2785 dbSNP
rs1289733528 2795 dbSNP
rs1455538125 2796 dbSNP
rs1373755285 2807 dbSNP
rs1173068589 2810 dbSNP
rs746733802 2811 dbSNP
rs906207737 2817 dbSNP
rs897260466 2820 dbSNP
rs931291717 2821 dbSNP
rs1134326 2822 dbSNP
rs1260757271 2825 dbSNP
rs1134327 2830 dbSNP
rs889821418 2833 dbSNP
rs572139943 2834 dbSNP
rs1349241861 2836 dbSNP
rs1258228502 2839 dbSNP
rs1443735355 2846 dbSNP
rs1326281638 2848 dbSNP
rs1296703436 2849 dbSNP
rs1007546146 2850 dbSNP
rs1134328 2856 dbSNP
rs1304638552 2856 dbSNP
rs201465153 2859 dbSNP
rs1312381871 2866 dbSNP
rs1435344360 2875 dbSNP
rs540854459 2878 dbSNP
rs11558576 2879 dbSNP
rs560632580 2880 dbSNP
rs901296464 2884 dbSNP
rs1460398907 2887 dbSNP
rs999699534 2894 dbSNP
rs1170853912 2898 dbSNP
rs1478616513 2901 dbSNP
rs1134330 2910 dbSNP
rs768745923 2916 dbSNP
rs1485747133 2926 dbSNP
rs3196534 2935 dbSNP
rs1030726950 2936 dbSNP
rs957790864 2938 dbSNP
rs1252282696 2946 dbSNP
rs1220803336 2954 dbSNP
rs1341012892 2956 dbSNP
rs1292837542 2959 dbSNP
rs1415612590 2959 dbSNP
rs1198774669 2960 dbSNP
rs1271986779 2965 dbSNP
rs756575844 2969 dbSNP
rs1331797112 2972 dbSNP
rs372776730 2972 dbSNP
rs572081512 2972 dbSNP
rs1466940477 2975 dbSNP
rs1415379339 2976 dbSNP
rs1163848998 2977 dbSNP
rs1491540921 2977 dbSNP
rs1023300004 2978 dbSNP
rs1208980519 2978 dbSNP
rs1234173098 2978 dbSNP
rs1238335483 2978 dbSNP
rs1332027730 2978 dbSNP
rs1335112181 2978 dbSNP
rs1358709141 2978 dbSNP
rs35319817 2978 dbSNP
rs754550298 2978 dbSNP
rs796417976 2978 dbSNP
rs879198785 2978 dbSNP
rs989259487 2978 dbSNP
rs1467131045 2980 dbSNP
rs1392074879 2982 dbSNP
rs574160058 2991 dbSNP
rs1324950515 2993 dbSNP
rs543135501 2994 dbSNP
rs1195361276 2996 dbSNP
rs869043880 2996 dbSNP
rs1267797347 2998 dbSNP
rs1004917137 2999 dbSNP
rs7952 3005 dbSNP
rs982399832 3006 dbSNP
rs1181130000 3013 dbSNP
rs761822228 3013 dbSNP
rs927912085 3016 dbSNP
rs1252815179 3022 dbSNP
rs897403005 3039 dbSNP
rs1214652979 3040 dbSNP
rs1466333491 3042 dbSNP
rs1351582556 3045 dbSNP
rs532140513 3052 dbSNP
rs1242294399 3055 dbSNP
rs1392300492 3059 dbSNP
rs940489994 3064 dbSNP
rs1368639232 3066 dbSNP
rs1302455947 3069 dbSNP
rs1436843204 3071 dbSNP
rs1332472654 3078 dbSNP
rs1315851844 3084 dbSNP
rs151001163 3087 dbSNP
rs920452959 3089 dbSNP
rs1159906359 3091 dbSNP
rs1433425515 3101 dbSNP
rs1394965851 3105 dbSNP
rs565616640 3108 dbSNP
rs141136987 3114 dbSNP
rs774226592 3123 dbSNP
rs1048494220 3124 dbSNP
rs1240716415 3125 dbSNP
rs548046508 3127 dbSNP
rs1488728766 3130 dbSNP
rs567877667 3131 dbSNP
rs942718857 3146 dbSNP
rs868789699 3147 dbSNP
rs1279443815 3151 dbSNP
rs1064123 3152 dbSNP
rs373985569 3160 dbSNP
rs995703615 3177 dbSNP
rs1268164106 3178 dbSNP
rs901436733 3186 dbSNP
rs1340693275 3197 dbSNP
rs1331940827 3201 dbSNP
rs550301479 3210 dbSNP
rs569910689 3211 dbSNP
rs1177507868 3216 dbSNP
rs1485484162 3217 dbSNP
rs1052585060 3218 dbSNP
rs539065052 3229 dbSNP
rs778505732 3237 dbSNP
rs1167649793 3240 dbSNP
rs1478278652 3250 dbSNP
rs530951635 3256 dbSNP
rs894014060 3259 dbSNP
rs1185920383 3261 dbSNP
rs1485421294 3271 dbSNP
rs1238123831 3277 dbSNP
rs1415805951 3278 dbSNP
rs1010659170 3279 dbSNP
rs1313862088 3285 dbSNP
rs1213732610 3288 dbSNP
rs1270652744 3288 dbSNP
rs1476197845 3289 dbSNP
rs558573419 3300 dbSNP
rs1345162838 3302 dbSNP
rs1231069611 3305 dbSNP
rs1452259243 3308 dbSNP
rs1291062446 3309 dbSNP
rs1361510279 3312 dbSNP
rs1056055 3318 dbSNP
rs1450839930 3319 dbSNP
rs1353222674 3326 dbSNP
rs15395 3340 dbSNP
rs969426994 3342 dbSNP
rs1003223887 3349 dbSNP
rs572338740 3350 dbSNP
rs1163137980 3352 dbSNP
rs1474987350 3355 dbSNP
rs1035326000 3363 dbSNP
rs1484213545 3363 dbSNP
rs961970740 3363 dbSNP
rs1231038299 3367 dbSNP
rs1197919664 3369 dbSNP
rs1458098843 3370 dbSNP
rs544297274 3375 dbSNP
rs777587647 3377 dbSNP
rs1353048057 3380 dbSNP
rs1312845326 3387 dbSNP
rs920420053 3387 dbSNP
rs1312800974 3391 dbSNP
rs751073876 3394 dbSNP
rs951920187 3409 dbSNP
rs1371824770 3414 dbSNP
rs984129895 3416 dbSNP
rs1324281220 3419 dbSNP
rs72864280 3419 dbSNP
rs1461144171 3420 dbSNP
rs1316326664 3426 dbSNP
rs898277686 3430 dbSNP
rs554314921 3431 dbSNP
rs922616332 3433 dbSNP
rs935563422 3436 dbSNP
rs1239797685 3437 dbSNP
rs371868838 3437 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions HEK293
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM545214. RNA binding protein: AGO3. Condition:Control ...

- Hafner M; Landthaler M; Burger L; Khorshid et al., 2010, Cell.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' agACUCCGACACCCCGAc 5'
            | |||   ||||||| 
Target 5' -aUUAGGACAUGGGGCUa 3'
 		1 - 17
Article - Hafner M; Landthaler M; Burger L; Khorshid et al.
- Cell, 2010
RNA transcripts are subject to posttranscriptional gene regulation involving hundreds of RNA-binding proteins (RBPs) and microRNA-containing ribonucleoprotein complexes (miRNPs) expressed in a cell-type dependent fashion. We developed a cell-based crosslinking approach to determine at high resolution and transcriptome-wide the binding sites of cellular RBPs and miRNPs. The crosslinked sites are revealed by thymidine to cytidine transitions in the cDNAs prepared from immunopurified RNPs of 4-thiouridine-treated cells. We determined the binding sites and regulatory consequences for several intensely studied RBPs and miRNPs, including PUM2, QKI, IGF2BP1-3, AGO/EIF2C1-4 and TNRC6A-C. Our study revealed that these factors bind thousands of sites containing defined sequence motifs and have distinct preferences for exonic versus intronic or coding versus untranslated transcript regions. The precise mapping of binding sites across the transcriptome will be critical to the interpretation of the rapidly emerging data on genetic variation between individuals and how these variations contribute to complex genetic diseases.
LinkOut: [PMID: 20371350]
CLIP-seq Support 1 for dataset GSM545214
Method / RBP PAR-CLIP / AGO3
Cell line / Condition HEK293 / Control
Location of target site ENST00000493763.1 | 3UTR | AUUAGGACAUGGGGCUAUGCAUAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 20371350 / GSE21578
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
64 hsa-miR-4323 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT052834 NOL11 nucleolar protein 11 1 1
MIRT082489 PPP1R37 protein phosphatase 1 regulatory subunit 37 2 2
MIRT117166 PER1 period circadian clock 1 2 2
MIRT157951 TMEM184B transmembrane protein 184B 2 2
MIRT286013 TVP23B trans-golgi network vesicle protein 23 homolog B 2 2
MIRT310457 REST RE1 silencing transcription factor 2 2
MIRT338984 CPSF6 cleavage and polyadenylation specific factor 6 2 2
MIRT404223 RPL7L1 ribosomal protein L7 like 1 2 2
MIRT451439 TJP3 tight junction protein 3 2 2
MIRT463541 ZBTB7A zinc finger and BTB domain containing 7A 2 2
MIRT466981 STARD7 StAR related lipid transfer domain containing 7 2 4
MIRT479627 CDC25A cell division cycle 25A 2 2
MIRT487983 SEC14L3 SEC14 like lipid binding 3 2 4
MIRT488661 ELAVL3 ELAV like RNA binding protein 3 2 2
MIRT489925 RTKN rhotekin 2 2
MIRT490209 PKNOX2 PBX/knotted 1 homeobox 2 2 2
MIRT494896 ZNF662 zinc finger protein 662 2 2
MIRT495380 RELT RELT, TNF receptor 2 2
MIRT495549 ANKRD65 ankyrin repeat domain 65 2 2
MIRT499104 AGRN agrin 2 2
MIRT500036 ABCF2 ATP binding cassette subfamily F member 2 2 8
MIRT501135 SLC2A1 solute carrier family 2 member 1 2 2
MIRT505573 SMC1A structural maintenance of chromosomes 1A 2 6
MIRT508164 ABCC5 ATP binding cassette subfamily C member 5 2 8
MIRT512383 PHB2 prohibitin 2 2 2
MIRT512719 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 2
MIRT520904 STMN1 stathmin 1 2 2
MIRT526361 TIMMDC1 translocase of inner mitochondrial membrane domain containing 1 2 2
MIRT526847 GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 2 2
MIRT526945 CMSS1 cms1 ribosomal small subunit homolog (yeast) 2 4
MIRT527028 PABPN1L poly(A) binding protein nuclear 1 like, cytoplasmic 2 2
MIRT527988 TSLP thymic stromal lymphopoietin 2 2
MIRT532202 MPDU1 mannose-P-dolichol utilization defect 1 2 2
MIRT533691 TMEM86A transmembrane protein 86A 2 2
MIRT535020 PRMT7 protein arginine methyltransferase 7 2 4
MIRT535054 PQLC1 PQ loop repeat containing 1 2 2
MIRT538987 BCL2L2 BCL2 like 2 2 2
MIRT552232 SART3 squamous cell carcinoma antigen recognized by T-cells 3 2 2
MIRT553259 TVP23C trans-golgi network vesicle protein 23 homolog C 2 2
MIRT555157 PTPDC1 protein tyrosine phosphatase domain containing 1 2 2
MIRT565202 TSC22D4 TSC22 domain family member 4 2 2
MIRT566199 PTP4A1 protein tyrosine phosphatase type IVA, member 1 2 2
MIRT566526 PARP16 poly(ADP-ribose) polymerase family member 16 2 2
MIRT568464 ARPP19 cAMP regulated phosphoprotein 19 2 2
MIRT572231 ATG2A autophagy related 2A 2 2
MIRT573096 NDUFA7 NADH:ubiquinone oxidoreductase subunit A7 2 2
MIRT573326 RFC5 replication factor C subunit 5 2 2
MIRT632802 KIAA2022 neurite extension and migration factor 2 2
MIRT646433 ARAP1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 2 3
MIRT647826 MTG1 mitochondrial ribosome associated GTPase 1 2 4
MIRT652191 TRIM44 tripartite motif containing 44 2 2
MIRT653800 SIRPA signal regulatory protein alpha 2 2
MIRT666949 PKHD1 PKHD1, fibrocystin/polyductin 2 2
MIRT684833 SCAI suppressor of cancer cell invasion 2 2
MIRT687294 PARP2 poly(ADP-ribose) polymerase 2 2 2
MIRT700188 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT701784 MSL2 MSL complex subunit 2 2 2
MIRT705958 ACY1 aminoacylase 1 2 2
MIRT705998 ABHD14A-ACY1 ABHD14A-ACY1 readthrough 2 2
MIRT717107 PXDC1 PX domain containing 1 2 2
MIRT717586 VTA1 vesicle trafficking 1 2 2
MIRT722148 SLC2A8 solute carrier family 2 member 8 2 2
MIRT723479 WIPF2 WAS/WASL interacting protein family member 2 2 2
MIRT725221 PEA15 phosphoprotein enriched in astrocytes 15 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4323 Cisplatin 5460033 NSC119875 approved resistant High Hypopharyngeal Cancer cell line (FaDu)
hsa-mir-4323 Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-4323 Doxorubicin 31703 NSC123127 approved sensitive cell line (W1)
hsa-mir-4323 Methotrexate 126941 NSC740 approved sensitive cell line (W1)
hsa-mir-4323 Topotecan 60699 NSC609699 approved sensitive cell line (W1)
hsa-mir-4323 Vincristine 5978 approved sensitive cell line (W1)
hsa-mir-4323 Docetaxel+Cisplatin+5-Fluorouracil resistant tissue (hypopharyngeal squamous cell carcinoma)
hsa-miR-4323 Tripterygium wilfordii Hook F resistant tissue
hsa-miR-4323 Osimertinib 71496458 NSC779217 approved sensitive cell line (H1975)
hsa-miR-4323 Neoadjuvant chemotherapy resistant tissue (breast cancer)
hsa-miR-4323 Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)
hsa-miR-4323 Gemcitabine 60750 NSC613327 approved resistant cell line (Panc1-GR4)

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