miRTarBase - #MIRT439768


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pre-miRNA Information
pre-miRNA hsa-mir-544a   
Genomic Coordinates chr14: 101048658 - 101048748
Description Homo sapiens miR-544a stem-loop
Comment The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies .
RNA Secondary Structure
Associated Diseases

Mature miRNA Information
Mature miRNA hsa-miR-544a
Sequence 55| AUUCUGCAUUUUUAGCAAGUUC |76
Evidence Experimental
Experiments Cloned
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1286637864 5 dbSNP
rs1394789797 9 dbSNP
rs1172200176 17 dbSNP
Putative Targets

Gene Information
Gene Symbol RLIM   
Synonyms MRX61, NY-REN-43, RNF12
Description ring finger protein, LIM domain interacting
Transcript NM_016120   
Other Transcripts NM_183353   
Expression
Putative miRNA Targets on RLIM
3'UTR of RLIM
(miRNA target sites are highlighted)		 
>RLIM|NM_016120|3'UTR
   1 TTAAGATCTGAACTCTCAGCTATGTAGCTGATATAGTGATGGGCAAACAGGAATCACTTGCTTTTATGTCCACTTTTTGA
  81 GTGGTACTTAAATGTAAAGTAACAACCTGAATTGAGTCATTGCTTTCTGAAGGAATCATTGTCCTTTCTCCAGTTTTTGT
 161 TCCAGAATAAAAGGAAATATTTTAAAAGCCACGTTATAGGACCTAAAAATCTGATTTCCGTACCAGTTAAATTGGTAGCA
 241 TCACTGTTACTGATAATTTATCATATACACTTGTCAATTTTTCCTTTGTTATCTTAAAAGATCTGCCTTAGCAATGGCTC
 321 CTTTTTCATGTTGATCTTTAAATTTTCCCACACCATAAGAGAGGAGCAAAGGAAATTACCAGTTTAGACTAAGTTACAGT
 401 ATGTGTTTCATAAGTGATTAAAGCTATATCATTCCCAGTTATTAGTTAACACAAATTCAGCCACATTCTGAGTATTGTTT
 481 GTTCACCTTTCAGACTTGGTGATACTGGACATGTCAGTGTAAATAACACTAAGGTTAGGATCTTCTAAGTGTATAACTGT
 561 CTCCTAAGCCCATCACTGTGGCACACTGTAGAGTGAGCTTATAGTTTAATTGAGATATTTATCTTGTGGAAATATTAAAA
 641 AGCCTATGCTTGTGTAAGTGAAAAAAAATCACATTCATTTGTTTAAAAATGTAAAGCTATTTTGTAGAGGCTCAGTACTT
 721 TTCCAATGCACTGTTGTATGAATGCATTAAAAATTGTAAAGTACCATGCTTAGAACTGAGAAAACTGCTTTTTGTGAGCC
 801 AACATAGTAACAAACACACCAAACAAAGTACAAAGCTGCTTTTGTAAGTGTGTAGATGTCAAGAGCAGAACATATCTATA
 881 ATATTTAATGTGTGAACAGCTACTGTGACATGCAAAGGAAAGGACAGTGCAGAATTAAACCGTGTTGAAGACCAGTGGAA
 961 ATTGTATAATTTAACTTGGATTTAGGCAGGAAGTGAAATATGGGAGGAGTAAAGAAAACTGAAGAATTTAAAGTTTTCCT
1041 GAAGACAGTAATAATGCAGACACAAACTGGTTTCATATGGTGAGAGCAGCCACAGCAGCAGCTTGACCTGGTATTCTACC
1121 TGAGTAGATGAAGCAGAAGATCAGCAAGTTTGGCAGAGTTTTGGTTTAAGAAAAACAAACCACTACTACCTAGCACAAGT
1201 TAAATTTACAAGTCTGCTCCTCAAAAATGAAAAAATGGAGGAAAGAGACTATAAAACCACTTTTAGCATATGAATTGCAG
1281 TTGGTACACATGTGTGTGTTAATAGGAAAGTCTCGAATTTGTGTTGTTTTTGAGATTTGTCATTTAAGGTACCAGTGCAC
1361 ACTTGATCATATTTCATTACTATCTCTAACACAGTCCTAACATCTCAAATTTAAAGACCAGTTGAAGATTAAGGGATTTT
1441 TATCCTTTGTTGAAAGTCATGTTGGGTTATTTGAAATTCAAATTTTAATTGTGCTGCCCATATATGAAAATGAGACTGCT
1521 GACTCGCTATCTATGGACATGCACTTTATGTTGGTTTCTTAGTAGTAAGAGTAACTTCATGATAACCCCAGTCTTCTTGC
1601 CTAATTTCTTTTTTGAGACTAGCTGGGGTTAGGATTAGAATGACTATGGAGCAGATATTTGTTCTTCTGGGAAAAGCTTT
1681 AACAGGCCAAAATAGGGATTGAACTTGTCCTTGGCCTTTATCAAAGCAAGCTAGCTACCCAGACGTAGTCAAATACTCTA
1761 CAAAATAAACAAGTCTGCTTTAGGAATTGTCTGGGTACCTTCACTGTTACCAACTTAGCTGTAAAGATTATTTCAAAGCT
1841 CACTCTTCCATGATTTCTTCTGGCTTTCAATCCTATCTAAGTATCAAGGAAATTAACTTGTAAATATGGTAGTTGTTTAC
1921 TAAGGATATGTACTGCTCTTGCAAGGAAATAATGTCCAAACAAAGCTTCACTTATTTTTTTTAATATAAGCAGATTTCAC
2001 TGTTTATGGCGCTTATGTAATACATTTTATCTTTTTAAAAATTTGTCCGTGTAAAAGTCAGGATTCCTTTATATTTGTGA
2081 GCCTCCTTTTCTCCTTTCCTAAGGATGTAATCTACAGTTTTCAGATCTGCAGGGTAGTCTTGATTGGCTAAAAACAAATC
2161 AATTTTCTTCTTGGCATAAAGTGTTTCATTATTATAGGGGTGTTCATTTTAAATAGTTTAAAAACAATTGCAGCACATTC
2241 TAAGCATAAGAGAAAGTTATTGACAACAGGTACCTTCCTAATCTCCCAAGACGTACTTACTCATTTGTGAAGTATTAAAG
2321 TAAGAGGTAACTCAAGCAGAATGCTGGCTATGAATGTAGATATTGAAGCTATTCATAAACACTGGAAATAGAATTTTAAG
2401 CTTTTAGCCTTCAGTGGAATGCACATATTGGACATGTGCATGTGAACACCTTTTTCAGTAGCACTCACGGATTTCCATTC
2481 GATTGTATAGAATGAATACAAGTGTTTTAGTGGAATTTGCTACTTAATTTTTAATCTTGCGATGTCCGTGATTATTACAT
2561 GCTTACTAGTGTTGTGGACATTGAAGACAAGGTCATTCGTAGGTGTCAGATTACAATGGAGAACAAAAATCGTTTTCCCC
2641 CCACCCACATCCAAACACCATTCTCGAGGGAGCATTTCTTGCAAAACACCTTACATTTCATTTTCTATCTTTGCACTTTT
2721 TCTTAAGTACAGAAAAGTTGTCTTTAAGACCTAGTTTGAACTTCATGCAGTAAGAGGAACAAGGATAAACAATGTTGGGA
2801 GTTCACATTGTTCAGAGCATAAGGAAAAGTACCAAAACCCAAATTTTCTTGAATATTTCAGATGTTTTTAAAAACTCACT
2881 TCTAGTCTGAAACATTTGAATTGTTTTAACTCTGAGCAGCTGACAAAGTTGAGGTTTTTTTGTTTTGTTTTGTTTTGTTT
2961 TGTTTTTTTGAGACAGAGTCTTACTTGGTTGCCCAGGATGAAGTGCAATGGAGCGATCTCGGCTCACTGCAACCTCTGCC
3041 TCCTGGGTTCAAGCAATTCTCCTGTCTCAGCCTCTCGAGTAGCTGGGATTACAGGCGCATGCCACCACACCTGGCTAGTT
3121 TTTATATTTTTAGTAGAGATGGGGACTTCACCGTGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATGTGCCTG
3201 CCTCGGCCTCCGAAAATGCTGGGATTACAGGCGTGAGCCACCATGTCCAGCCAAAGTTGAGGTTTATTAGTACTATTAGA
3281 AACAAAATTGAGCAAGTTAAGTTAAAAGTTTGCTGACTTTGTATCAACACTATAGAAGATGAGCCACCTTGTTAATTTGG
3361 AATATTTGCTCTGAAAAGAACATGTTAGTTACACCTTAATGGTGTTAATGGAGGTGGGGATTGAGAAAAGTGTTCACATT
3441 AGTGTTGGAATGTAGGTAATTGTACAGTTTATAAGACCTTTAGCACCAGGAAATAAAATATGTGTGTGTACACACACAGT
3521 TTTTAAAAACGATTGGAATTCATCCAAACCTTAAGATTAGGAAACTGATTGGCTGTAAGTGTTGCCTCAAGTAATGTGTC
3601 CCCCGCCCCATAACATGTCTTTTCTGTGCCAAGTATCCTCTCCTAGTGTCAGTGTCTCAAATTATATTTATGAAGGGTTA
3681 TCACATAATATGCTTTGTATTTAACTACCTGCTTCCCAGGCGTCCATGACATGAAATGGGTGAAGCATCAGCCATGACTT
3761 TCGGTCAGTTCCCAAAATACCCAAATGATAGGGAGGTAAAGATTGCAAAATTCCTCTTAAAAGGCCATTTTTACAGCTTG
3841 CTAAAATACAGTGGCACCTTATGGTTGTTAATATTTTTTCTTTTAAAGATGGAGAATGTTTTTATTCTTCCCCTTTTCTC
3921 CTTTGTTCTTTTGCGAACAAAAAAAATTATAATCTGCCTTATTTGATTTTTTTTTTAAGTTTTACCTTACAGGCTTCCCT
4001 GTCACATGTTTTACCATATTAAGTACATAGAAGCCATGTTTGCAGGGCACTTTTATTCTCCTAGTCTTATAAGACTATGC
4081 TAATTGTTACTTTCTGAAGTATTCTGTACCTTAGTATGCAAGATTGTTAAGGCACATGTTAAAGTGTCAGGTGTGTTTTT
4161 TTCCCTTTAATTCTTCAGTATGTTTATATTCAATAACAGTATTGTAATTCATTGAGTTAACTAGTAAATTGTGTGCTTTT
4241 GAAAAAACATGAAAAATGTAAATTGACAGCATACTTCATTTGGAAAAAAGTAAAAGATCCGAGGAACTAGTATGTCACTT
4321 ATTTATTTTTATTTTATTTTATTTTTTACTTTTTGAGACAGGGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCATG
4401 GTCACAGCTCACTGCAGCCTTGACTTCCTGGGCTCAGGTGATTCTCCCACCTCAGCCTTCCAAGTAGCTGGGACTACAGG
4481 CATGCACCACATTGCCTGGCTAATTTTTTGTGGAGATGGGGTTTCGCCATGTTGTCCAGGCTGTTCTTGAACTCCTGGGC
4561 TCAGGCAATTTGCCTGCCTCATTCTCCCAAAGTGCTGGGATTATAGGCGTGAGCCACTGCGCCCAGCCTTACTTATTTTT
4641 AAATCAGATTTTTTAATCAACTAAAACAGCTATGAGTTAAGTACCTGCCCTGCAAAAATTTTTAGAAAAAGTTTTAGGAT
4721 TATGAAATTAAGAATTATTTTCCTTAACTGGAACAGTTCTAAAATTTATCTGATACTTCTCTAACAAGTGAGTGATCTCA
4801 TGTAACCCCAGTTTGTATCTTAAAGGCTGCAGCATAGAATTGAGCTGTATAACAGTGTTAGAACTGTCAAGTGATAATCA
4881 CAGAACAGTTTGTATCGGTTTTATAATTCTCATGTCTTGATCAGATCTGAAGGAAATAGGCATACCCTCCAACATTCTAA
4961 AAATTATTTATTTTTATTAGGATTTGTTTATTAAAGTTCCACGAGCTGCTTTATGGTCAGTTGGGCTGAGTAGTAGATAT
5041 CTTAAAGACATGCAGTGAAAGTGAACCCTGTCATATCATGGTGCCTCTTTCAAGGTTCCTCTGTAAGTTCCTCATCTTGC
5121 AGAATTATTTCAATACCAAGGTATGGTTGAACCAGCTGTCCAGCCTTAACTCTATTTAGTGCCCCATTACTAATGTTCTT
5201 TTAACTGGTTTGTATGTGTTTTAACTGTCCAGTGTTTGGATTTTACCTCTTGATAGCTCCATTTGTCCCTGGTGCTGCTT
5281 TTAAGGATGTAGGGCCATGTGATCAGGTATCAAGTTGAGTAGGTACGCAGTTGGCCTGGTGATGTATCTGTGCCTGTTTT
5361 ATCTTCTCCCAGGAAGAGCTGCTTTGGTATAGTTGTTTACTTGGATTCATACAAAGAACAGGGCAGCAATCTTGGAAAGC
5441 TTTCTGAAGCTTATAAGAACCTGAAGGGGTTTGGAGGGGGAACAGTAACAAAGGCTGCCTTTATGTCTTTGGTCACAAAG
5521 CACATAGATGTATGTTCTGTAAAGACTAAAGTGATTGTTATACCAGGGCTTCCTGACCTTCGGGAGAGACTCAAAAAAGC
5601 AGAGAGGAGCACAAAGTGAAGTTAATTTGGTTGGCTTGCTTTATCTGGTTTCTCATTTTCTTTCAATTTAAACCTGAACA
5681 TAACACCCTTCTCCGATACCTATCCAGCAGACTCCTGGTTGGGAAGCCCTGTATTAAATTTTGAGAATGTACACAGTTTT
5761 CTTTTGTACAGTGCTTTACAACTGCTAAAAGTTAACTTGTTTAAAGCAAAACAAGACCTTGAAAGGTCAATCATATTAAA
5841 GCTGGTTTGATTATTAATAGTTATCTTTTAGGAAGAAGCTTTTTTCCCTATGTAAGATGTCATACTGCAGATTTAAAATA
5921 TAGACTATCAATAAAATGCATGAAGTGATCATTTGTGCTTGATCATCTCTCCTTGGGTTTTTCTTTAAAAAGGGGAATCT
6001 GCTATAAAGGTTCTGTTGCTTCAAACCAATGTCAAATAGACTTGATTTTTAGAGTCATGGAATTACAGTGCAACCTTGAT
6081 TTTTATTCCCCTCACTGCTATGAGTGTGGGCAGGTACTGGTTTATATGTTATAACTTCCGTTTTATCTGTGTTGTGTAGT
6161 TGAATGGCTTAATCGTTGAGTGGTAAAATAAAAGATTATATTCCAATACAAGAATCCTGGAAAGATTTATGTGAATGACA
6241 TTTTAAGTAGGCGCATCTTTGCTGTTTCTTGTATTCTCGCCATTGCTCTGACCACTCCCTTGCTTGCCCTGTATATATAC
6321 AAAAACTTGTAGGTGTGCACGTGTGCTTGTACTTCTGTCTTCCATTTCTATCTTAATCTCTTAAACATATTGCTTAAGCC
6401 ACTAAGATGTCCTTGTTTCAAGTAAATCGTCACATTGTGACACCTGGTGTATTGTATTATAGTTTCATTTCCTCTGGTGC
6481 CTGCAGAGCTATCTGTCATTGGCATCATAACTCGGTTTCTCAGGATAGTTTTGATGTAGTCAGCTCTTCAACTCATGACC
6561 TTCCCAAGGTTTTAAGTTTAGTGTCATTCATGATTTTATTATTTGAAACTCAATACCACCATCAAAAAGTTAGTGCTCTA
6641 GACAATGAAGCCAAAGCACAGGCATCTTAGGTCAGTGAAAAGGATCCAGACATAAATTAGCCAGGTGTGGTGGTACACAG
6721 CTGTGGTCCCAGCTACTTGGGAGGCTGAGGTGGTAGAATCACTTGAGCCCGGGAGGTCAAGGCTGCAGTGAGCCATGATC
6801 ATGCTGATGCACTCCAGCCTGGGTTACAGAGCAAAACCTTGTCTCAAAAAAACCCCCAGATACCTAGAAGAAAGGATTCG
6881 ATAAATCTGGGTGGATTATAAACTGAACTCTTAATGGTCATTTTAAAAAATAAGAAAGCAAGGGTCCAGTTTCTTTGAGG
6961 TCTTTGAATTTAGACAAGATTTAACTATAAGGCCTTGCATGGATTACTAACTATAATTAAATTAGCTAAACTTTTCTGGT
7041 TGCTGTCAGGCATTGTATTAAGTATTCTATATAAATTATTTAATCATCACAGTGACTGTGAGGTGAAAGTATACCACCCA
7121 TTTTATAGGTAATGCAGCTGAGATACAGATGTTTGGTAATTTGCCCAGGTCACATAGTAAGTAGCAGATTATTTGCAATC
7201 ATCTTTGATGCAGTCATCTTCCTTGTGCTCTTAATCCCACTACTATATGACTTCTAATTTGTTTCTTAGTATTTATCCCA
7281 AGCCCTAGACTAGATTGCTTATGAGGTGTGATTTCTTAGGAAAAACATCAGTTTTGGCTGGTTTGCCAAGAAAAAAAAAG
7361 GCCAAATTGGTTTTTGTTTATTTTTTTGTTTGTTTGAGATGGATTCTCGCCCTGTCGCCCAGGCTGGAGTGCAATGGTGC
7441 GATCTTGGCTCACTGCAACCTCTGCCTCTGGGTTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGG
7521 CGCCCGCCACCACGCCCAGCTAATTTTTCTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAAC
7601 CCCTGATCCCATGATCTGCCCGTCTCGGCCTCCCACAGTGGTGGTATTACAGGCGTGAGCCACCACGCCCGGCCGCAAAT
7681 TGTTTTTTGTTTTTTTGTTTTTTGGAGGATTAATGGTAATATACTGTAAATTCAGTAAAGCACTGGGCATTACCAGATAC
7761 ACCTTAGCACTATGAATAACATGAACTATCATTTTAGCAGTTTAAGTGTACCTTGTAATCAGCCCTAGGGCAAACGGTAT
7841 CAAGGTGTTTTATTTCCAGAAGTCTCAAAATAGACTGGAATAAAAATTTGGTGAATTCATCAACACAGACAATGGGTCCA
7921 CGTCTTGCAGCTACAGCTGCTGCAGCTACTCCTGCTGTCCGCACCGTTCCACAGTATAAATATGCTGCGGGAGTTTGCAA
8001 TCCTCAGCAACATCTTAATGCACAGCCACAAGTTACAGTGCAACAGCCTGCTATTCATGTACAAGGTCAGGAACCTTTGA
8081 CTGTTTCCATGTTGGCATCTGCCCCTCAAGAGCAAAAGCAAATGTTGGGTGAATGGCTGTTTCCTCTTATTCAAGCCATG
8161 CACCCTACTCTTGCCGGTAAAATCACTGGCGTGTTGTTGGAGATTGATAATTCAGAACTTCTTCATATGCTCAAGTCTCC
8241 AGAGTCACTCCATTCTAAGGTTGATGAAGCTGTAGCTGTACTACAAGCCCACCAAGCTAAAGAGACTGCCCAGAAAGCAG
8321 TTAACAGTGCCACCGGTGTTCCAACTGTTTAAAATTGATCAGGGACCACGAAAAGAAACTTGTGCTTCACCAAAGAAAAA
8401 TATCTAAACATCGAAAAACTTAAATATGGAAAAAAATATCAAAATATAAAAGAAGGAAACTGAAAAAAAAAAAAAAAAAA
8481 AAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' cuUGAACGAUU--UUU------ACGUCUUa 5'
            || ||| ||  |||      ||||||| 
Target 5' tgACATGCAAAGGAAAGGACAGTGCAGAAt 3'
 906 - 935 156.00 -12.50
2 
miRNA  3' cuUGAACGAUUUUUACGUCUUa 5'
            | || || |   ||||||| 
Target 5' taAGTTCCTCATCTTGCAGAAt 3'
 5104 - 5125 152.00 -8.30
3 
miRNA  3' cuugaacgAUUUUUACGUCUua 5'
                  ||| ||||||||  
Target 5' gaagacagTAATAATGCAGAca 3'
 1041 - 1062 142.00 -8.10
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1172681467 7 dbSNP
rs757030734 13 dbSNP
rs1267795568 18 dbSNP
rs377585663 22 dbSNP
rs764067439 24 dbSNP
rs373492816 34 dbSNP
rs757879669 42 dbSNP
rs369181581 51 dbSNP
rs1385186745 61 dbSNP
rs202198284 70 dbSNP
rs747791155 72 dbSNP
rs1332078789 81 dbSNP
rs373953940 118 dbSNP
rs1052436 119 dbSNP
rs749807331 134 dbSNP
rs1273584856 138 dbSNP
rs1322245508 145 dbSNP
rs1001925785 150 dbSNP
rs1264625353 163 dbSNP
rs189073695 168 dbSNP
rs757690666 172 dbSNP
rs1046495966 193 dbSNP
rs928946600 199 dbSNP
rs918913985 218 dbSNP
rs1037321100 219 dbSNP
rs941596417 220 dbSNP
rs778479669 247 dbSNP
rs1304610788 275 dbSNP
rs910075628 277 dbSNP
rs1317428016 282 dbSNP
rs1392878236 288 dbSNP
rs1432580212 304 dbSNP
rs754790614 314 dbSNP
rs1344728247 318 dbSNP
rs1221227868 320 dbSNP
rs1284634662 324 dbSNP
rs1323880806 343 dbSNP
rs753752788 355 dbSNP
rs1281647024 361 dbSNP
rs775470432 364 dbSNP
rs954125247 366 dbSNP
rs7056769 368 dbSNP
rs1264535821 369 dbSNP
rs1480393946 376 dbSNP
rs1197432923 380 dbSNP
rs922649684 383 dbSNP
rs1480782437 386 dbSNP
rs756047265 404 dbSNP
rs796963298 423 dbSNP
rs1405994503 434 dbSNP
rs764389003 435 dbSNP
rs977161654 441 dbSNP
rs750359355 449 dbSNP
rs966776041 451 dbSNP
rs1021358691 454 dbSNP
rs1304469642 455 dbSNP
rs1345626616 463 dbSNP
rs760709225 472 dbSNP
rs1010845384 491 dbSNP
rs1352308654 492 dbSNP
rs957922374 504 dbSNP
rs1033484917 511 dbSNP
rs1001958472 512 dbSNP
rs1490343707 529 dbSNP
rs906294285 537 dbSNP
rs1271622894 538 dbSNP
rs752849617 556 dbSNP
rs28718654 562 dbSNP
rs1423020969 566 dbSNP
rs1181096470 574 dbSNP
rs1267068534 578 dbSNP
rs1362350649 584 dbSNP
rs767442977 588 dbSNP
rs1190340636 612 dbSNP
rs1372676464 618 dbSNP
rs1384350735 631 dbSNP
rs1466850808 635 dbSNP
rs1165416021 642 dbSNP
rs28460638 648 dbSNP
rs1254353527 668 dbSNP
rs1046184684 669 dbSNP
rs1390317473 669 dbSNP
rs1328430893 680 dbSNP
rs1258842120 681 dbSNP
rs1241073247 685 dbSNP
rs764183140 691 dbSNP
rs1317341519 693 dbSNP
rs1442453585 699 dbSNP
rs1300313510 711 dbSNP
rs369635373 715 dbSNP
rs993644441 723 dbSNP
rs762989384 727 dbSNP
rs1373379377 730 dbSNP
rs775748062 758 dbSNP
rs762957960 762 dbSNP
rs1434402344 763 dbSNP
rs1382850745 767 dbSNP
rs910106916 776 dbSNP
rs1049931212 806 dbSNP
rs932769559 822 dbSNP
rs1461407286 825 dbSNP
rs767681202 828 dbSNP
rs773064089 833 dbSNP
rs1377480580 842 dbSNP
rs769646725 878 dbSNP
rs765439972 893 dbSNP
rs1451002972 896 dbSNP
rs1174330017 897 dbSNP
rs1341645223 921 dbSNP
rs1452192582 925 dbSNP
rs1250089400 928 dbSNP
rs1396468287 941 dbSNP
rs1199284169 942 dbSNP
rs1262753390 942 dbSNP
rs1193747594 943 dbSNP
rs759877126 962 dbSNP
rs761585851 985 dbSNP
rs915168300 990 dbSNP
rs776318692 1019 dbSNP
rs1256568193 1020 dbSNP
rs967177119 1023 dbSNP
rs1190964261 1024 dbSNP
rs776926973 1025 dbSNP
rs1374667450 1056 dbSNP
rs1477865839 1063 dbSNP
rs1175086289 1066 dbSNP
rs1403524500 1067 dbSNP
rs1259021733 1072 dbSNP
rs1305005941 1079 dbSNP
rs1470741029 1079 dbSNP
rs1403401389 1081 dbSNP
rs1381956238 1082 dbSNP
rs1294074258 1093 dbSNP
rs1328636752 1099 dbSNP
rs1219397680 1103 dbSNP
rs1282709107 1104 dbSNP
rs1321731920 1108 dbSNP
rs1206899222 1109 dbSNP
rs1205772409 1129 dbSNP
rs1256768677 1130 dbSNP
rs1485429363 1140 dbSNP
rs913918855 1143 dbSNP
rs1263851388 1148 dbSNP
rs989856440 1163 dbSNP
rs768327808 1173 dbSNP
rs1198128561 1181 dbSNP
rs184437293 1185 dbSNP
rs1033517668 1193 dbSNP
rs375793034 1212 dbSNP
rs1002072892 1217 dbSNP
rs1350351081 1223 dbSNP
rs1453496884 1229 dbSNP
rs1287478148 1233 dbSNP
rs779639087 1236 dbSNP
rs970568426 1247 dbSNP
rs1025216248 1248 dbSNP
rs1343754523 1251 dbSNP
rs990109827 1267 dbSNP
rs372686220 1270 dbSNP
rs5981287 1275 dbSNP
rs1324827350 1277 dbSNP
rs575309014 1285 dbSNP
rs779548303 1290 dbSNP
rs1491317087 1291 dbSNP
rs774710317 1292 dbSNP
rs1354378696 1296 dbSNP
rs1221704058 1300 dbSNP
rs757744056 1302 dbSNP
rs1015944372 1303 dbSNP
rs1191198849 1309 dbSNP
rs888705621 1312 dbSNP
rs1050046167 1315 dbSNP
rs1382520678 1320 dbSNP
rs761133938 1321 dbSNP
rs1436922663 1333 dbSNP
rs1163531574 1339 dbSNP
rs1376425825 1348 dbSNP
rs5981652 1349 dbSNP
rs1448498680 1361 dbSNP
rs1294181641 1363 dbSNP
rs901363232 1369 dbSNP
rs1372936911 1372 dbSNP
rs778243260 1380 dbSNP
rs1389861401 1382 dbSNP
rs1311691965 1385 dbSNP
rs773617357 1392 dbSNP
rs1041585510 1399 dbSNP
rs1244905812 1401 dbSNP
rs945492544 1402 dbSNP
rs1361493147 1418 dbSNP
rs1221732129 1421 dbSNP
rs756377609 1428 dbSNP
rs1370854661 1430 dbSNP
rs1479476384 1436 dbSNP
rs1194611473 1438 dbSNP
rs1238356958 1460 dbSNP
rs1440704046 1461 dbSNP
rs1183363582 1473 dbSNP
rs752800308 1481 dbSNP
rs1407555904 1487 dbSNP
rs1429077729 1496 dbSNP
rs913939518 1497 dbSNP
rs1460489203 1500 dbSNP
rs1333638111 1504 dbSNP
rs1377836426 1512 dbSNP
rs1451727396 1516 dbSNP
rs1208611513 1525 dbSNP
rs989442986 1529 dbSNP
rs936713996 1533 dbSNP
rs1294719393 1543 dbSNP
rs771591020 1546 dbSNP
rs980683570 1549 dbSNP
rs970601277 1554 dbSNP
rs1460590524 1564 dbSNP
rs1024829143 1571 dbSNP
rs1241654321 1581 dbSNP
rs1473957804 1587 dbSNP
rs577814837 1589 dbSNP
rs1272006532 1594 dbSNP
rs1426813279 1599 dbSNP
rs1172906542 1603 dbSNP
rs961829157 1646 dbSNP
rs747653913 1658 dbSNP
rs1334494406 1669 dbSNP
rs767636483 1671 dbSNP
rs1448422197 1685 dbSNP
rs868348102 1700 dbSNP
rs1417132737 1701 dbSNP
rs1269535290 1708 dbSNP
rs1356582831 1743 dbSNP
rs1307797059 1744 dbSNP
rs1219999035 1745 dbSNP
rs1409012982 1756 dbSNP
rs1278252858 1766 dbSNP
rs759527149 1772 dbSNP
rs1221335545 1773 dbSNP
rs770853723 1773 dbSNP
rs1280236846 1778 dbSNP
rs192576029 1802 dbSNP
rs1005975436 1808 dbSNP
rs1444501316 1808 dbSNP
rs1242116316 1822 dbSNP
rs1487588515 1836 dbSNP
rs1196001873 1848 dbSNP
rs190333181 1857 dbSNP
rs1480129066 1870 dbSNP
rs1174576044 1875 dbSNP
rs1427459455 1879 dbSNP
rs1414830564 1880 dbSNP
rs1317357431 1886 dbSNP
rs1343411296 1889 dbSNP
rs1401732845 1900 dbSNP
rs1393816895 1908 dbSNP
rs765139973 1909 dbSNP
rs1169162636 1911 dbSNP
rs1276249934 1925 dbSNP
rs1462090558 1933 dbSNP
rs1345272868 1938 dbSNP
rs761640744 1946 dbSNP
rs1185798942 1956 dbSNP
rs1283982985 1960 dbSNP
rs1476138031 1963 dbSNP
rs1352208094 1965 dbSNP
rs1219477146 1970 dbSNP
rs1264468818 1974 dbSNP
rs1490211425 1981 dbSNP
rs1028643579 1983 dbSNP
rs997117653 1983 dbSNP
rs184600418 1991 dbSNP
rs1436322998 1992 dbSNP
rs1157821431 2005 dbSNP
rs1405556551 2005 dbSNP
rs901391282 2006 dbSNP
rs1421234564 2009 dbSNP
rs1041222518 2010 dbSNP
rs1364810064 2011 dbSNP
rs192306728 2017 dbSNP
rs1324944546 2022 dbSNP
rs892632090 2026 dbSNP
rs28507240 2037 dbSNP
rs1440990608 2041 dbSNP
rs1277371034 2048 dbSNP
rs1242696896 2049 dbSNP
rs1375176634 2049 dbSNP
rs887142373 2057 dbSNP
rs1287372948 2062 dbSNP
rs1359344537 2069 dbSNP
rs760390424 2091 dbSNP
rs1208187653 2095 dbSNP
rs1355785320 2101 dbSNP
rs748952366 2114 dbSNP
rs1452210436 2127 dbSNP
rs868061654 2133 dbSNP
rs1047055702 2134 dbSNP
rs936744872 2138 dbSNP
rs1179015002 2140 dbSNP
rs1384590918 2145 dbSNP
rs188428948 2150 dbSNP
rs771668702 2154 dbSNP
rs1164539241 2160 dbSNP
rs898420411 2161 dbSNP
rs1044973505 2165 dbSNP
rs1390872481 2173 dbSNP
rs1408813572 2173 dbSNP
rs926650486 2178 dbSNP
rs1401944965 2197 dbSNP
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rs781317448 6726 dbSNP
rs1252904004 6728 dbSNP
rs147301728 6739 dbSNP
rs1201050729 6743 dbSNP
rs1394855912 6747 dbSNP
rs1453348177 6752 dbSNP
rs914175802 6759 dbSNP
rs183507454 6760 dbSNP
rs191822883 6770 dbSNP
rs758145769 6771 dbSNP
rs1368673153 6801 dbSNP
rs1388054094 6803 dbSNP
rs951089269 6805 dbSNP
rs1334615391 6806 dbSNP
rs1236431785 6811 dbSNP
rs1262115112 6817 dbSNP
rs1331728106 6818 dbSNP
rs986225366 6827 dbSNP
rs1026665808 6843 dbSNP
rs1467548963 6845 dbSNP
rs1193379142 6847 dbSNP
rs745577842 6853 dbSNP
rs1418512420 6858 dbSNP
rs1485154317 6875 dbSNP
rs1414452640 6879 dbSNP
rs186921051 6880 dbSNP
rs183045709 6898 dbSNP
rs1211765697 6900 dbSNP
rs963627749 6915 dbSNP
rs1459404840 6919 dbSNP
rs1018315557 6922 dbSNP
rs1395223446 6937 dbSNP
rs754474079 6939 dbSNP
rs1289884052 6952 dbSNP
rs1212737884 6975 dbSNP
rs1319856548 6982 dbSNP
rs1350692187 6985 dbSNP
rs997546989 7002 dbSNP
rs1413990813 7003 dbSNP
rs1353294257 7019 dbSNP
rs1304878731 7025 dbSNP
rs141974317 7028 dbSNP
rs1017146075 7042 dbSNP
rs890640283 7061 dbSNP
rs1480382958 7064 dbSNP
rs1014872156 7071 dbSNP
rs1006135926 7078 dbSNP
rs1326859772 7082 dbSNP
rs1467673239 7083 dbSNP
rs1424907656 7090 dbSNP
rs1187436155 7091 dbSNP
rs1415417430 7099 dbSNP
rs1164809231 7101 dbSNP
rs887649907 7103 dbSNP
rs1165463567 7120 dbSNP
rs148179457 7125 dbSNP
rs1460059837 7142 dbSNP
rs1309350874 7143 dbSNP
rs1370582495 7146 dbSNP
rs1413802468 7161 dbSNP
rs1310626708 7163 dbSNP
rs937122775 7166 dbSNP
rs906964769 7174 dbSNP
rs1230375150 7188 dbSNP
rs1314128282 7190 dbSNP
rs1307396801 7192 dbSNP
rs1226791156 7194 dbSNP
rs1183299962 7200 dbSNP
rs367972577 7203 dbSNP
rs903241607 7209 dbSNP
rs1342892226 7223 dbSNP
rs1210513685 7228 dbSNP
rs1255649368 7229 dbSNP
rs1043041145 7249 dbSNP
rs756623806 7254 dbSNP
rs1483342183 7261 dbSNP
rs947429769 7269 dbSNP
rs915906350 7273 dbSNP
rs1045868180 7278 dbSNP
rs1426682668 7307 dbSNP
rs1170347238 7316 dbSNP
rs1390259269 7319 dbSNP
rs753132113 7321 dbSNP
rs1433556904 7329 dbSNP
rs1171429672 7335 dbSNP
rs767835932 7347 dbSNP
rs1450690923 7348 dbSNP
rs945753664 7359 dbSNP
rs1343050993 7360 dbSNP
rs1429236183 7360 dbSNP
rs1433529673 7360 dbSNP
rs928478155 7360 dbSNP
rs938595162 7360 dbSNP
rs982588016 7380 dbSNP
rs1314188875 7386 dbSNP
rs1259932948 7388 dbSNP
rs1463333996 7388 dbSNP
rs951112265 7388 dbSNP
rs1190496780 7392 dbSNP
rs1248563076 7392 dbSNP
rs1458696406 7392 dbSNP
rs759930645 7397 dbSNP
rs912875273 7408 dbSNP
rs529332205 7409 dbSNP
rs1426597860 7410 dbSNP
rs774484293 7413 dbSNP
rs973808520 7414 dbSNP
rs1157825770 7416 dbSNP
rs1314538880 7417 dbSNP
rs1344983055 7418 dbSNP
rs1455974693 7433 dbSNP
rs1323191022 7436 dbSNP
rs1366533257 7438 dbSNP
rs936919851 7440 dbSNP
rs757689792 7441 dbSNP
rs1229106869 7442 dbSNP
rs766590068 7458 dbSNP
rs1220048751 7459 dbSNP
rs1372822457 7460 dbSNP
rs143650493 7479 dbSNP
rs953525883 7480 dbSNP
rs1030440100 7481 dbSNP
rs375417765 7490 dbSNP
rs1449156762 7491 dbSNP
rs1401086295 7495 dbSNP
rs1325906915 7501 dbSNP
rs1467994086 7502 dbSNP
rs1460328917 7507 dbSNP
rs1247949562 7509 dbSNP
rs1478034507 7511 dbSNP
rs1352002287 7514 dbSNP
rs1165874452 7521 dbSNP
rs976560363 7522 dbSNP
rs962103957 7525 dbSNP
rs1015337366 7526 dbSNP
rs769937245 7529 dbSNP
rs1351746675 7530 dbSNP
rs951949897 7533 dbSNP
rs1034239796 7534 dbSNP
rs746947351 7537 dbSNP
rs1441071626 7538 dbSNP
rs1348832416 7543 dbSNP
rs1238236329 7551 dbSNP
rs1213005816 7558 dbSNP
rs1333793714 7559 dbSNP
rs1226546822 7563 dbSNP
rs1001387118 7568 dbSNP
rs1267026445 7583 dbSNP
rs1451719998 7586 dbSNP
rs764763204 7592 dbSNP
rs1045511880 7593 dbSNP
rs1248926448 7598 dbSNP
rs1483851518 7599 dbSNP
rs775567458 7600 dbSNP
rs762535799 7606 dbSNP
rs1030920459 7608 dbSNP
rs1162046226 7616 dbSNP
rs771823704 7621 dbSNP
rs998946441 7622 dbSNP
rs192881565 7626 dbSNP
rs1411902037 7627 dbSNP
rs1308800740 7634 dbSNP
rs925559902 7637 dbSNP
rs903354473 7650 dbSNP
rs1354642139 7651 dbSNP
rs1445532496 7654 dbSNP
rs188491370 7666 dbSNP
rs1213882549 7667 dbSNP
rs756954832 7670 dbSNP
rs562336061 7671 dbSNP
rs923426299 7674 dbSNP
rs976233910 7675 dbSNP
rs962442518 7679 dbSNP
rs1385602222 7685 dbSNP
rs1442245887 7689 dbSNP
rs907918641 7692 dbSNP
rs1055769067 7697 dbSNP
rs1370293267 7704 dbSNP
rs1168430082 7710 dbSNP
rs759074584 7715 dbSNP
rs1431687966 7720 dbSNP
rs1294606011 7722 dbSNP
rs1401745660 7725 dbSNP
rs1473292815 7726 dbSNP
rs1453543163 7749 dbSNP
rs878922799 7753 dbSNP
rs748879541 7760 dbSNP
rs1340779669 7767 dbSNP
rs1343797767 7769 dbSNP
rs1156518364 7783 dbSNP
rs1429955697 7785 dbSNP
rs1295298140 7788 dbSNP
rs777266242 7803 dbSNP
rs755613463 7805 dbSNP
rs753261029 7812 dbSNP
rs1001437824 7824 dbSNP
rs1192419138 7832 dbSNP
rs1342466750 7835 dbSNP
rs768045788 7836 dbSNP
rs929826456 7842 dbSNP
rs1281171917 7845 dbSNP
rs1443293703 7847 dbSNP
rs1188547209 7848 dbSNP
rs919753020 7853 dbSNP
rs755336840 7857 dbSNP
rs973849585 7880 dbSNP
rs1269423507 7886 dbSNP
rs1189325010 7888 dbSNP
rs1024555202 7889 dbSNP
rs550106028 7896 dbSNP
rs1174480945 7898 dbSNP
rs1402722205 7905 dbSNP
rs891554218 7907 dbSNP
rs1456506413 7909 dbSNP
rs942437935 7911 dbSNP
rs183878688 7912 dbSNP
rs999844997 7914 dbSNP
rs1485453700 7921 dbSNP
rs1283613208 7925 dbSNP
rs889439229 7928 dbSNP
rs1234974338 7929 dbSNP
rs77850446 7933 dbSNP
rs1346229621 7944 dbSNP
rs1208460826 7945 dbSNP
rs1354606311 7950 dbSNP
rs976280420 7950 dbSNP
rs1466667288 7951 dbSNP
rs955138097 7954 dbSNP
rs77674268 7957 dbSNP
rs1314006052 7958 dbSNP
rs77166218 7960 dbSNP
rs763284139 7961 dbSNP
rs1338910120 7965 dbSNP
rs977640651 7966 dbSNP
rs773502143 7976 dbSNP
rs932223707 7981 dbSNP
rs923508681 7982 dbSNP
rs1040949893 7988 dbSNP
rs77814275 7989 dbSNP
rs868334807 7993 dbSNP
rs74559061 7996 dbSNP
rs765480974 8000 dbSNP
rs1464146570 8008 dbSNP
rs940839218 8020 dbSNP
rs1323848210 8027 dbSNP
rs1378846376 8028 dbSNP
rs77407345 8038 dbSNP
rs1286857687 8039 dbSNP
rs761973821 8046 dbSNP
rs1260779207 8049 dbSNP
rs78118824 8053 dbSNP
rs775342071 8057 dbSNP
rs1487570647 8058 dbSNP
rs779619275 8076 dbSNP
rs1268087550 8078 dbSNP
rs1482869795 8079 dbSNP
rs77921515 8084 dbSNP
rs1413919375 8085 dbSNP
rs1472786522 8086 dbSNP
rs1164076399 8089 dbSNP
rs907976436 8093 dbSNP
rs984854502 8094 dbSNP
rs1459034931 8102 dbSNP
rs1163371070 8103 dbSNP
rs1198935685 8103 dbSNP
rs1347303935 8104 dbSNP
rs776858201 8108 dbSNP
rs1309461703 8110 dbSNP
rs1227361496 8112 dbSNP
rs894837768 8113 dbSNP
rs772018102 8124 dbSNP
rs1312696506 8125 dbSNP
rs867999880 8126 dbSNP
rs1247572743 8134 dbSNP
rs1266114507 8138 dbSNP
rs1341474690 8139 dbSNP
rs1203351121 8144 dbSNP
rs867642028 8146 dbSNP
rs745755562 8153 dbSNP
rs1333161157 8156 dbSNP
rs866011482 8158 dbSNP
rs1253755048 8160 dbSNP
rs952052571 8162 dbSNP
rs1425495107 8163 dbSNP
rs1403722347 8167 dbSNP
rs1389082682 8168 dbSNP
rs868576827 8175 dbSNP
rs866650596 8176 dbSNP
rs1421445875 8181 dbSNP
rs1370766268 8184 dbSNP
rs1172710438 8190 dbSNP
rs866155402 8191 dbSNP
rs868820973 8193 dbSNP
rs1185697545 8197 dbSNP
rs1444286732 8206 dbSNP
rs980081001 8208 dbSNP
rs867984084 8218 dbSNP
rs1226232357 8222 dbSNP
rs774205613 8225 dbSNP
rs1277091726 8229 dbSNP
rs796592019 8231 dbSNP
rs879068026 8233 dbSNP
rs1484105857 8234 dbSNP
rs1260600026 8246 dbSNP
rs1247310467 8248 dbSNP
rs879005635 8252 dbSNP
rs1189965823 8255 dbSNP
rs1286185652 8255 dbSNP
rs1334683560 8257 dbSNP
rs1282715999 8259 dbSNP
rs1242173731 8261 dbSNP
rs1467896321 8264 dbSNP
rs1341837363 8270 dbSNP
rs796755702 8278 dbSNP
rs1388515193 8279 dbSNP
rs770560649 8283 dbSNP
rs1445470535 8288 dbSNP
rs1397488389 8292 dbSNP
rs1333364535 8297 dbSNP
rs749004309 8301 dbSNP
rs989071146 8304 dbSNP
rs879022589 8305 dbSNP
rs1313782000 8307 dbSNP
rs955883627 8308 dbSNP
rs1161193076 8309 dbSNP
rs1463515360 8311 dbSNP
rs1415254362 8320 dbSNP
rs1210442711 8324 dbSNP
rs111549797 8328 dbSNP
rs112806379 8334 dbSNP
rs1189164771 8344 dbSNP
rs1426790547 8345 dbSNP
rs1435326380 8358 dbSNP
rs1032754132 8361 dbSNP
rs201084589 8363 dbSNP
rs879155337 8369 dbSNP
rs1240096569 8370 dbSNP
rs200442865 8383 dbSNP
rs1468382809 8387 dbSNP
rs879222169 8392 dbSNP
rs1345936811 8393 dbSNP
rs1435813603 8396 dbSNP
rs967542478 8405 dbSNP
rs371406235 8406 dbSNP
rs1224316329 8412 dbSNP
rs1287496862 8413 dbSNP
rs201122554 8425 dbSNP
rs1357456040 8428 dbSNP
rs1284865117 8430 dbSNP
rs1450579665 8436 dbSNP
rs1265727523 8437 dbSNP
rs1238975212 8438 dbSNP
rs1247893239 8439 dbSNP
rs1374024867 8440 dbSNP
rs889489425 8449 dbSNP
rs1251625456 8452 dbSNP
rs769343117 8452 dbSNP
rs1471813899 8454 dbSNP
rs1162055423 8463 dbSNP
rs1027948878 8465 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions islets
Tools used in this research TargetScan
Original Description (Extracted from the article) ... HITS-CLIP data was present in Supplenentary. RNA binding protein: AGO. ...

- Kameswaran V; Bramswig NC; McKenna LB; Penn et al., 2014, Cell metabolism.

Article - Kameswaran V; Bramswig NC; McKenna LB; Penn et al.
- Cell metabolism, 2014
Type 2 diabetes mellitus (T2DM) is a complex disease characterized by the inability of the insulin-producing beta cells in the endocrine pancreas to overcome insulin resistance in peripheral tissues. To determine if microRNAs are involved in the pathogenesis of human T2DM, we sequenced the small RNAs of human islets from diabetic and nondiabetic organ donors. We identified a cluster of microRNAs in an imprinted locus on human chromosome 14q32 that is highly and specifically expressed in human beta cells and dramatically downregulated in islets from T2DM organ donors. The downregulation of this locus strongly correlates with hypermethylation of its promoter. Using HITS-CLIP for the essential RISC-component Argonaute, we identified disease-relevant targets of the chromosome 14q32 microRNAs, such as IAPP and TP53INP1, that cause increased beta cell apoptosis upon overexpression in human islets. Our results support a role for microRNAs and their epigenetic control by DNA methylation in the pathogenesis of T2DM.
LinkOut: [PMID: 24374217]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
139 hsa-miR-544a Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT053511 BMI1 BMI1 proto-oncogene, polycomb ring finger 4 1
MIRT054802 CDH1 cadherin 1 3 2
MIRT075814 ZCCHC14 zinc finger CCHC-type containing 14 2 3
MIRT125570 SCD stearoyl-CoA desaturase 1 1
MIRT246745 SF1 splicing factor 1 2 2
MIRT259487 TXLNG taxilin gamma 2 2
MIRT307650 SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 2 2
MIRT377046 ASXL2 additional sex combs like 2, transcriptional regulator 2 2
MIRT386936 STAT3 signal transducer and activator of transcription 3 3 1
MIRT394127 UBQLN1 ubiquilin 1 1 1
MIRT439199 ZNF483 zinc finger protein 483 1 1
MIRT439207 ZNF33A zinc finger protein 33A 1 1
MIRT439262 ZBTB17 zinc finger and BTB domain containing 17 1 1
MIRT439263 YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma 1 1
MIRT439281 XAB2 XPA binding protein 2 1 1
MIRT439314 VAT1 vesicle amine transport 1 1 1
MIRT439380 TTC37 tetratricopeptide repeat domain 37 1 1
MIRT439397 TPT1 tumor protein, translationally-controlled 1 1 1
MIRT439419 TMOD1 tropomodulin 1 1 1
MIRT439491 SYT5 synaptotagmin 5 1 1
MIRT439511 STXBP1 syntaxin binding protein 1 1 1
MIRT439586 SMAD7 SMAD family member 7 1 1
MIRT439727 RPS6 ribosomal protein S6 1 1
MIRT439768 RLIM ring finger protein, LIM domain interacting 1 1
MIRT439828 RAD50 RAD50 double strand break repair protein 1 1
MIRT439840 RAB21 RAB21, member RAS oncogene family 1 1
MIRT439846 RAB14 RAB14, member RAS oncogene family 1 1
MIRT439975 PIK3C2A phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha 1 1
MIRT440031 PCDHAC2 protocadherin alpha subfamily C, 2 1 1
MIRT440135 NCOA2 nuclear receptor coactivator 2 1 1
MIRT440173 MTSS1L MTSS1L, I-BAR domain containing 1 1
MIRT440222 MMP2 matrix metallopeptidase 2 1 1
MIRT440433 IQGAP1 IQ motif containing GTPase activating protein 1 1 1
MIRT440443 INTS3 integrator complex subunit 3 1 1
MIRT440449 INS insulin 1 1
MIRT440512 HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 1 1
MIRT440534 GPR56 adhesion G protein-coupled receptor G1 1 1
MIRT440540 GOLGB1 golgin B1 1 1
MIRT440580 GEM GTP binding protein overexpressed in skeletal muscle 1 1
MIRT440629 FNDC3A fibronectin type III domain containing 3A 1 1
MIRT440667 FBXL16 F-box and leucine rich repeat protein 16 1 1
MIRT440680 CCSER1 coiled-coil serine rich protein 1 1 1
MIRT440696 FADS1 fatty acid desaturase 1 1 1
MIRT440761 DYNC1H1 dynein cytoplasmic 1 heavy chain 1 1 1
MIRT440764 DUSP26 dual specificity phosphatase 26 1 1
MIRT440769 DSTYK dual serine/threonine and tyrosine protein kinase 1 1
MIRT440774 DSP desmoplakin 1 1
MIRT440792 DNAJC3 DnaJ heat shock protein family (Hsp40) member C3 1 1
MIRT440801 DNAJB9 DnaJ heat shock protein family (Hsp40) member B9 1 1
MIRT440888 CPE carboxypeptidase E 1 1
MIRT440923 CLTC clathrin heavy chain 1 1
MIRT440950 CHD7 chromodomain helicase DNA binding protein 7 1 1
MIRT440993 CC2D2A coiled-coil and C2 domain containing 2A 1 1
MIRT441014 CAPN3 calpain 3 1 1
MIRT441106 BRD4 bromodomain containing 4 1 1
MIRT441144 ATP6V1B2 ATPase H+ transporting V1 subunit B2 1 1
MIRT441173 ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 1 1
MIRT441258 ADM adrenomedullin 1 1
MIRT441279 ACTB actin beta 2 5
MIRT441298 ACACB acetyl-CoA carboxylase beta 1 1
MIRT443751 SLC7A14 solute carrier family 7 member 14 2 2
MIRT450469 TRMT5 tRNA methyltransferase 5 2 4
MIRT450852 HMGN2 high mobility group nucleosomal binding domain 2 2 6
MIRT454152 HIST1H2BK histone cluster 1 H2B family member k 2 2
MIRT465705 TNFAIP1 TNF alpha induced protein 1 2 2
MIRT466121 TMEM170A transmembrane protein 170A 2 2
MIRT471376 PDPR pyruvate dehydrogenase phosphatase regulatory subunit 2 2
MIRT477475 ELL2 elongation factor for RNA polymerase II 2 2 2
MIRT481660 ARAP2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 2 2
MIRT502469 FAM98A family with sequence similarity 98 member A 2 8
MIRT503952 ZNF180 zinc finger protein 180 2 6
MIRT505585 SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 2 6
MIRT529936 SYNGR1 synaptogyrin 1 2 2
MIRT530626 PPIC peptidylprolyl isomerase C 2 4
MIRT536883 HIC2 HIC ZBTB transcriptional repressor 2 2 2
MIRT546847 RAB1A RAB1A, member RAS oncogene family 2 2
MIRT548448 EIF1AX eukaryotic translation initiation factor 1A, X-linked 2 2
MIRT557130 HOXA13 homeobox A13 2 2
MIRT560089 ERCC8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit 2 2
MIRT560984 GPBP1L1 GC-rich promoter binding protein 1 like 1 2 2
MIRT566340 POLDIP2 DNA polymerase delta interacting protein 2 2 2
MIRT567838 DCAF8 DDB1 and CUL4 associated factor 8 2 2
MIRT609236 SERPINA4 serpin family A member 4 2 2
MIRT611452 ZWILCH zwilch kinetochore protein 2 2
MIRT612058 PDGFRA platelet derived growth factor receptor alpha 2 2
MIRT612783 MAP3K9 mitogen-activated protein kinase kinase kinase 9 2 4
MIRT615116 BCL11B B-cell CLL/lymphoma 11B 2 2
MIRT616572 C1orf56 chromosome 1 open reading frame 56 2 2
MIRT616690 LPL lipoprotein lipase 2 2
MIRT616986 COL19A1 collagen type XIX alpha 1 chain 2 2
MIRT619427 CYB5R3 cytochrome b5 reductase 3 2 2
MIRT623320 MAP3K2 mitogen-activated protein kinase kinase kinase 2 2 2
MIRT626897 MON1B MON1 homolog B, secretory trafficking associated 2 2
MIRT637554 KDELR1 KDEL endoplasmic reticulum protein retention receptor 1 2 2
MIRT639473 SLC6A4 solute carrier family 6 member 4 2 2
MIRT639753 GPR45 G protein-coupled receptor 45 2 2
MIRT640703 MRS2 MRS2, magnesium transporter 2 2
MIRT642489 ALDOA aldolase, fructose-bisphosphate A 2 2
MIRT644578 SPOP speckle type BTB/POZ protein 2 2
MIRT645009 NGRN neugrin, neurite outgrowth associated 2 2
MIRT646533 KLK2 kallikrein related peptidase 2 2 2
MIRT648625 LEMD2 LEM domain containing 2 2 2
MIRT650235 ERI1 exoribonuclease 1 2 2
MIRT651932 UBN1 ubinuclein 1 2 2
MIRT652960 SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 2 2
MIRT654842 PPM1L protein phosphatase, Mg2+/Mn2+ dependent 1L 2 2
MIRT656142 MSH5 mutS homolog 5 2 2
MIRT656730 LMBRD2 LMBR1 domain containing 2 2 2
MIRT657340 HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 2 2
MIRT658991 DLGAP2 DLG associated protein 2 2 2
MIRT660714 AMER1 APC membrane recruitment protein 1 2 2
MIRT666591 RFX3 regulatory factor X3 2 2
MIRT667201 NKX2-3 NK2 homeobox 3 2 2
MIRT668732 DIO2 iodothyronine deiodinase 2 2 2
MIRT669479 ARL5B ADP ribosylation factor like GTPase 5B 2 2
MIRT681083 GSTO2 glutathione S-transferase omega 2 2 2
MIRT686736 STX16 syntaxin 16 2 2
MIRT687432 NR3C1 nuclear receptor subfamily 3 group C member 1 2 2
MIRT689887 SOD2 superoxide dismutase 2 2 2
MIRT695759 WDR35 WD repeat domain 35 2 2
MIRT698346 TMEM127 transmembrane protein 127 2 2
MIRT702752 IGF1R insulin like growth factor 1 receptor 2 2
MIRT703137 GPR137C G protein-coupled receptor 137C 2 2
MIRT705063 C4orf32 family with sequence similarity 241 member A 2 2
MIRT709597 IFT74 intraflagellar transport 74 2 2
MIRT709997 TXNDC12 thioredoxin domain containing 12 2 2
MIRT710463 ASTN2 astrotactin 2 2 2
MIRT710468 CDH5 cadherin 5 2 2
MIRT715625 ZBTB8B zinc finger and BTB domain containing 8B 2 2
MIRT720091 SPTLC3 serine palmitoyltransferase long chain base subunit 3 2 2
MIRT721054 DCC DCC netrin 1 receptor 2 2
MIRT721961 MCM8 minichromosome maintenance 8 homologous recombination repair factor 2 2
MIRT722122 EPB41 erythrocyte membrane protein band 4.1 2 2
MIRT722538 AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 2 2
MIRT723325 DGAT1 diacylglycerol O-acyltransferase 1 2 2
MIRT725330 NEUROD1 neuronal differentiation 1 2 2
MIRT731556 HOXA10 homeobox A10 2 1
MIRT732380 BCL6 B-cell CLL/lymphoma 6 3 1
MIRT736700 E2F5 E2F transcription factor 5 3 0
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-544a Cisplatin 5460033 NSC119875 approved sensitive Low Esophageal Squamous Cell Carcinoma cell line (KYSE450, TE-1)
hsa-miR-544a Trastuzumab sensitive High Breast Cancer cell line (SKBR3)
hsa-mir-544a Paclitaxel 36314 NSC125973 approved sensitive cell line (W1)
hsa-mir-544a Cisplatin 5460033 NSC119875 approved sensitive cell line (W1)
hsa-mir-544a Paclitaxel 36314 NSC125973 approved sensitive cell line (A2780)
hsa-mir-544a Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-544a Gefitinib 123631 NSC715055 approved resistant cell line (HCC827)
hsa-miR-544a Vemurafenib 42611257 NSC761431 approved resistant cell line (LM17)
hsa-miR-544a Vemurafenib 42611257 NSC761431 approved resistant cell line (LM11)
hsa-miR-544a Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-544a Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-544a Paclitaxel 36314 NSC125973 approved resistant cell line (SKOV3)
hsa-miR-544a Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-544a Gemcitabine 60750 NSC613327 approved resistant cell line (PANC-1) (1500 ng/ml)

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