pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol DNAJA4   
Synonyms MST104, MSTP104, PRO1472
Description DnaJ heat shock protein family (Hsp40) member A4
Transcript NM_001130182   
Other Transcripts NM_001130183 , NM_018602   
Expression
Putative miRNA Targets on DNAJA4
3'UTR of DNAJA4
(miRNA target sites are highlighted)
>DNAJA4|NM_001130182|3'UTR
   1 CGTGGTGCGGGGCAGCGTGGCCCCACCGGACTAGCACATGATGAATGTAAAGTTGGCACAATGAAAATGACATCGCTTTA
  81 ATGGCCTTGTGTTTGGGATGTCCTGTGTATGTGTTCAGCATTCTTAATTGCTGAGTGTCTTTTTGGCTTTTCTTTTGGTT
 161 GTAACTTAAGTTATAGCTTAATTTATATTTAAATGTTTTAAGTATAAATCACCTCTAGTCTGCATATGGAATCTGTTCAT
 241 TTCTATTTTCAGGATATACTTTTGAGATGTCAGTGATTGCACCAATACTTTGTGCTTCTAGTGGCTTTGCCATAATTCAG
 321 TGTCACCAATAAGGCACAGCCCAGTTAGCAGCTTAGCCCCCCTAGCAAACCCCAAGGCACAAAGTGGGCATCCTGACTCA
 401 TCTCTAGGTCTGTGGTTTCTCCCCTCTTCCCTTGGCAGAGTTATTGAGGGCATGATCTCAGGGCTGCTAAGATAACATTT
 481 CTGAGGATTCTAGATGATCCTCTTAAAGAATAAAAGCACATCCGTGGATCGGACATGGCTGCATGTGCCTGCTTAACAGG
 561 GCCAACTTAGTTCCTACTGTTCTGTGCCCTTCAGTGGATGGAACGTGAGTGTCTGATCATCTCTCTTGGAAGTTTTCTGA
 641 ACCTTCCAAGCTCTGTGGTGAGGACAAACCAGTGTTTGAATCATATGCTGATAACTGTTTGCCTGTGACCCTCACACCTT
 721 GTTCTTCAGGGTTTTAATGATTTTCTGTTGACAACTTTTGCAATGCTTTCCCACCAAAGTGCTTACTTGTAAAGAAAACT
 801 AAATCCTTCTGTGTCCCCGGCAGCCTCAGTGCAGCAACAGAAGCCAAGGGAGAATGCTGCTGGTTTGGCCCATGGCACAG
 881 CCAGCTTCTCTGACCAGTAATCCGGGGTGACTTGAGGGTCTGCAAAGGCATAGAACTCCCCAGTGTTTTCCACCTCATTC
 961 TCCCAGATTGAGCTCCCTTCCAAAGGATCGTTCCTCTCATTGCACAGCCATATTACAAAGGGTTTCCTGCTCAAGTGATG
1041 TTTTGGTAAGAACTTCGCTGAGTTCCACTGTGGATTACAGTTTGTATGGACTACTACTGTAAATTATAGCTTGTTTGGAG
1121 GGATATTAGTCATTATTTTATTCATGACAGGTAGACTACAATTCGAACTTAGGGTTACCTCAGTCTTTAGCCATTACTGC
1201 TTATTTCTTTTCCCCAAGTCACAAAAAACTTGTAAGCTGCTGGGTTAAAGCAGAGGCCACCTGTCAGATCTACCCTACCC
1281 TTATTTGGTTACATGGCACCTGAGAGTTTCACTCAGACCAGGGATCTTCCTTAGGAGGGTCAAAGTGCAGATCAGACCAT
1361 GCAGGTAAGGTGAACCAGCTGCACGGACCAGGTTCCCGCAAAACATTGCCAGCTAGTGAGGCATAATTTGCTCAAAGTAT
1441 AGAAACAGCCCACCTGTGCCCACTTTGACCATTGGTGAGGATAGATATAAAATCACTTCTTCCAACGAAGCCTAGGTGAA
1521 AATCTATTTATAAATGGACCACAACTCTGGGGTGTCGTTTTTGTGCTGTGACTTCCTAATTATTGCTAAAGAACTACTGT
1601 TTAGTTGGTAATGGTGTAAAATTACATTCAGCTCCTTCTTGTCATATAAAAGGAATTTGGAGGGTGTCGCTTAAAATTTT
1681 ATTCCACCTGTACATTTGTCACTTTAAAATTAAAATTGAGCTGGTATGAGAGATAAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugccgaucACCUGGU--CCACUUCa 5'
                  | |||||  |||||:| 
Target 5' tgcccactTTGACCATTGGTGAGGa 3'
1457 - 1481 141.00 -15.40
2
miRNA  3' ugccgaucacCUGGUCCACUUca 5'
                    | |:|||||||  
Target 5' ttccaacgaaGCCTAGGTGAAaa 3'
1500 - 1522 133.00 -11.00
3
miRNA  3' ugCCGAUCAC--CUGGUCCACUUca 5'
            | | | ||  |:: |||||||  
Target 5' caGACCA-TGCAGGTAAGGTGAAcc 3'
1353 - 1376 130.00 -10.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN26441028 3 COSMIC
COSN30104474 7 COSMIC
COSN20058100 10 COSMIC
COSN31604440 18 COSMIC
COSN29148929 247 COSMIC
COSN17210113 276 COSMIC
COSN15262494 671 COSMIC
COSN28820681 686 COSMIC
COSN15662090 691 COSMIC
COSN25832378 702 COSMIC
COSN28806207 818 COSMIC
COSN31480743 915 COSMIC
COSN23987279 944 COSMIC
COSN22012575 1548 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs745726616 2 dbSNP
rs954736696 2 dbSNP
rs769560998 3 dbSNP
rs372936125 9 dbSNP
rs563625789 10 dbSNP
rs768649262 11 dbSNP
rs944497569 12 dbSNP
rs1363462302 13 dbSNP
rs1212680355 16 dbSNP
rs761961157 17 dbSNP
rs768176278 18 dbSNP
rs773396154 19 dbSNP
rs1277950078 23 dbSNP
rs1234275493 26 dbSNP
rs1204727723 27 dbSNP
rs575594484 28 dbSNP
rs761180696 29 dbSNP
rs1234579929 37 dbSNP
rs377224568 39 dbSNP
rs187860413 44 dbSNP
rs1476465409 47 dbSNP
rs930372599 56 dbSNP
rs771442267 64 dbSNP
rs894122905 75 dbSNP
rs1441669523 79 dbSNP
rs1012942394 84 dbSNP
rs1328081246 88 dbSNP
rs1267387772 93 dbSNP
rs544023673 106 dbSNP
rs1488937736 107 dbSNP
rs372554488 109 dbSNP
rs1045293860 113 dbSNP
rs1222103211 114 dbSNP
rs1163232205 121 dbSNP
rs950610615 121 dbSNP
rs906714106 132 dbSNP
rs1177440315 140 dbSNP
rs1438758715 144 dbSNP
rs1235974904 152 dbSNP
rs1215068848 153 dbSNP
rs1489337833 153 dbSNP
rs916906224 158 dbSNP
rs564257261 163 dbSNP
rs1219237109 168 dbSNP
rs1195007268 181 dbSNP
rs1318515071 183 dbSNP
rs1044139228 221 dbSNP
rs1003629454 224 dbSNP
rs1031054634 230 dbSNP
rs1375001968 232 dbSNP
rs956822895 242 dbSNP
rs925731611 244 dbSNP
rs1010945684 246 dbSNP
rs936795353 249 dbSNP
rs762692700 252 dbSNP
rs1171918369 260 dbSNP
rs1346296089 261 dbSNP
rs1167353097 265 dbSNP
rs1053955047 267 dbSNP
rs1418220627 269 dbSNP
rs8030867 287 dbSNP
rs1009759933 289 dbSNP
rs1454360247 292 dbSNP
rs59171189 299 dbSNP
rs986470336 302 dbSNP
rs1051989394 303 dbSNP
rs890430353 316 dbSNP
rs1007529600 321 dbSNP
rs911772533 323 dbSNP
rs1215685836 326 dbSNP
rs965875003 330 dbSNP
rs1282774331 331 dbSNP
rs1235211906 335 dbSNP
rs1330611412 352 dbSNP
rs1300980544 357 dbSNP
rs200251175 360 dbSNP
rs1363324364 361 dbSNP
rs773680612 362 dbSNP
rs1298104351 367 dbSNP
rs35657171 370 dbSNP
rs1398568251 371 dbSNP
rs761391866 372 dbSNP
rs1175137168 391 dbSNP
rs144014184 396 dbSNP
rs1435009078 400 dbSNP
rs1361860416 410 dbSNP
rs1376708090 425 dbSNP
rs1173390189 436 dbSNP
rs971924589 437 dbSNP
rs1400129776 450 dbSNP
rs192193286 452 dbSNP
rs1192799747 454 dbSNP
rs1487188475 463 dbSNP
rs1288164679 467 dbSNP
rs1211317179 482 dbSNP
rs1344660695 499 dbSNP
rs1359788828 509 dbSNP
rs1229763559 510 dbSNP
rs184367593 525 dbSNP
rs984543409 531 dbSNP
rs915576429 532 dbSNP
rs1289935370 537 dbSNP
rs948391515 540 dbSNP
rs1026139376 546 dbSNP
rs1357777498 553 dbSNP
rs528915589 559 dbSNP
rs1395773074 562 dbSNP
rs1401112717 566 dbSNP
rs189679375 576 dbSNP
rs906752295 577 dbSNP
rs753285732 591 dbSNP
rs1241972976 598 dbSNP
rs1423637039 599 dbSNP
rs939600541 601 dbSNP
rs1052594919 605 dbSNP
rs1419936048 606 dbSNP
rs750386568 606 dbSNP
rs568510542 610 dbSNP
rs892620116 611 dbSNP
rs1444447867 620 dbSNP
rs1161257814 627 dbSNP
rs1254365923 637 dbSNP
rs1010957054 638 dbSNP
rs992727151 639 dbSNP
rs756096450 640 dbSNP
rs1257444000 642 dbSNP
rs766134020 648 dbSNP
rs1337630435 651 dbSNP
rs1294418516 652 dbSNP
rs539104417 654 dbSNP
rs1019354125 656 dbSNP
rs1157753399 659 dbSNP
rs752542172 661 dbSNP
rs6996 686 dbSNP
rs192849454 687 dbSNP
rs1026182120 692 dbSNP
rs1392713408 693 dbSNP
rs1303399798 696 dbSNP
rs951830864 696 dbSNP
rs984966657 698 dbSNP
rs1330177277 699 dbSNP
rs1463577663 706 dbSNP
rs1396663524 711 dbSNP
rs535351681 714 dbSNP
rs1472363462 738 dbSNP
rs915625225 764 dbSNP
rs914052133 767 dbSNP
rs945565731 775 dbSNP
rs2139448 786 dbSNP
rs1196878597 806 dbSNP
rs1469839936 816 dbSNP
rs1274382856 817 dbSNP
rs3743083 818 dbSNP
rs559573900 819 dbSNP
rs939631702 820 dbSNP
rs1052606820 829 dbSNP
rs535947605 839 dbSNP
rs892651160 844 dbSNP
rs1308048440 845 dbSNP
rs140942074 848 dbSNP
rs557528562 849 dbSNP
rs1224350078 850 dbSNP
rs1039034530 864 dbSNP
rs946865138 868 dbSNP
rs1283628394 869 dbSNP
rs899196316 870 dbSNP
rs1404642556 885 dbSNP
rs1388476110 889 dbSNP
rs1160122598 891 dbSNP
rs1044205282 893 dbSNP
rs994918714 898 dbSNP
rs1455643322 899 dbSNP
rs1026840452 902 dbSNP
rs886251315 904 dbSNP
rs1450461324 905 dbSNP
rs1212820019 907 dbSNP
rs1286920120 919 dbSNP
rs1206143343 920 dbSNP
rs1264358733 923 dbSNP
rs1284908063 931 dbSNP
rs1237425481 934 dbSNP
rs575578883 938 dbSNP
rs1008052959 939 dbSNP
rs528770528 941 dbSNP
rs3743082 944 dbSNP
rs1239558611 949 dbSNP
rs75755852 953 dbSNP
rs184652480 954 dbSNP
rs540146063 955 dbSNP
rs1176333958 982 dbSNP
rs1320146197 982 dbSNP
rs561500303 986 dbSNP
rs1400414021 990 dbSNP
rs781773634 991 dbSNP
rs1157094278 993 dbSNP
rs112659911 995 dbSNP
rs58911342 998 dbSNP
rs748999459 998 dbSNP
rs993427510 999 dbSNP
rs1405306953 1000 dbSNP
rs1026213417 1002 dbSNP
rs1467979678 1003 dbSNP
rs1194981912 1004 dbSNP
rs143859101 1005 dbSNP
rs1488171783 1006 dbSNP
rs1261410325 1013 dbSNP
rs1333132677 1014 dbSNP
rs1213454422 1015 dbSNP
rs1486489296 1020 dbSNP
rs1278858827 1023 dbSNP
rs951862243 1024 dbSNP
rs1218149514 1027 dbSNP
rs984608648 1030 dbSNP
rs1271860340 1036 dbSNP
rs529100305 1041 dbSNP
rs1023214078 1047 dbSNP
rs1219102614 1047 dbSNP
rs1339739946 1049 dbSNP
rs1443194415 1054 dbSNP
rs1416359975 1057 dbSNP
rs969875490 1058 dbSNP
rs1333698446 1069 dbSNP
rs1412870343 1076 dbSNP
rs1421659888 1079 dbSNP
rs981582199 1085 dbSNP
rs1279228250 1088 dbSNP
rs1477815915 1090 dbSNP
rs1371247851 1093 dbSNP
rs1422107274 1094 dbSNP
rs1190570870 1100 dbSNP
rs748700643 1107 dbSNP
rs912994896 1108 dbSNP
rs928315004 1112 dbSNP
rs955679445 1115 dbSNP
rs1323455930 1118 dbSNP
rs1317261528 1123 dbSNP
rs117522719 1130 dbSNP
rs987604096 1133 dbSNP
rs988353437 1135 dbSNP
rs1283825650 1144 dbSNP
rs1446019139 1146 dbSNP
rs914120585 1147 dbSNP
rs1332211336 1149 dbSNP
rs1202394225 1153 dbSNP
rs1398761900 1161 dbSNP
rs946950639 1165 dbSNP
rs1043937834 1166 dbSNP
rs1413447559 1171 dbSNP
rs910692890 1180 dbSNP
rs562480160 1192 dbSNP
rs1230848841 1194 dbSNP
rs1178767057 1196 dbSNP
rs76815758 1200 dbSNP
rs1047772900 1201 dbSNP
rs886524669 1202 dbSNP
rs1014386811 1205 dbSNP
rs1040453290 1213 dbSNP
rs551065174 1215 dbSNP
rs550832307 1224 dbSNP
rs566469652 1226 dbSNP
rs1384081697 1230 dbSNP
rs1047686292 1231 dbSNP
rs59377828 1233 dbSNP
rs1374668196 1238 dbSNP
rs1400714051 1261 dbSNP
rs1006550999 1262 dbSNP
rs1022823479 1268 dbSNP
rs1409206784 1275 dbSNP
rs970285097 1281 dbSNP
rs747494855 1294 dbSNP
rs1353007839 1295 dbSNP
rs1438618188 1303 dbSNP
rs547362237 1312 dbSNP
rs1283988848 1313 dbSNP
rs573307622 1317 dbSNP
rs1002641922 1323 dbSNP
rs1222188521 1328 dbSNP
rs1163167773 1332 dbSNP
rs1280704717 1335 dbSNP
rs1381803455 1337 dbSNP
rs568658677 1338 dbSNP
rs1010326252 1341 dbSNP
rs1340440597 1347 dbSNP
rs1035360768 1361 dbSNP
rs1438547247 1370 dbSNP
rs955712104 1371 dbSNP
rs771634647 1380 dbSNP
rs1192418813 1384 dbSNP
rs1488806577 1385 dbSNP
rs914234623 1386 dbSNP
rs369261446 1397 dbSNP
rs955124401 1398 dbSNP
rs189635030 1399 dbSNP
rs1287011524 1400 dbSNP
rs912048421 1401 dbSNP
rs965270487 1402 dbSNP
rs980078923 1415 dbSNP
rs910733209 1418 dbSNP
rs180800124 1422 dbSNP
rs1040485534 1425 dbSNP
rs923317626 1440 dbSNP
rs930620983 1441 dbSNP
rs1047756809 1443 dbSNP
rs1361498574 1446 dbSNP
rs369206783 1447 dbSNP
rs1047801528 1450 dbSNP
rs535204104 1451 dbSNP
rs1177687906 1454 dbSNP
rs1373595310 1458 dbSNP
rs887758459 1470 dbSNP
rs1424386384 1474 dbSNP
rs1045870679 1475 dbSNP
rs1489163628 1478 dbSNP
rs1263699916 1480 dbSNP
rs1215590794 1481 dbSNP
rs1006168950 1482 dbSNP
rs1001785513 1483 dbSNP
rs1234073679 1489 dbSNP
rs796414823 1489 dbSNP
rs575621077 1499 dbSNP
rs905696612 1500 dbSNP
rs1407291658 1507 dbSNP
rs1002625865 1508 dbSNP
rs1304023698 1516 dbSNP
rs1298012389 1523 dbSNP
rs1398535398 1525 dbSNP
rs893047066 1527 dbSNP
rs539937706 1538 dbSNP
rs1466105037 1543 dbSNP
rs955828071 1544 dbSNP
rs145499064 1546 dbSNP
rs1478786773 1548 dbSNP
rs1019902041 1549 dbSNP
rs573193293 1557 dbSNP
rs968761035 1558 dbSNP
rs1300545616 1565 dbSNP
rs746258788 1567 dbSNP
rs1327538523 1575 dbSNP
rs1482979623 1575 dbSNP
rs955073363 1578 dbSNP
rs1200569206 1585 dbSNP
rs1319289941 1587 dbSNP
rs540135412 1592 dbSNP
rs1217194250 1600 dbSNP
rs1342564289 1600 dbSNP
rs1314464277 1614 dbSNP
rs1396302927 1617 dbSNP
rs1017997547 1623 dbSNP
rs1018235684 1628 dbSNP
rs1466721246 1633 dbSNP
rs1400960976 1635 dbSNP
rs796998908 1635 dbSNP
rs1358982438 1638 dbSNP
rs117664634 1648 dbSNP
rs976282409 1650 dbSNP
rs1423500228 1659 dbSNP
rs186280195 1663 dbSNP
rs920811547 1664 dbSNP
rs1458220533 1665 dbSNP
rs929401083 1669 dbSNP
rs1197254949 1670 dbSNP
rs983733276 1677 dbSNP
rs1266448068 1695 dbSNP
rs189143786 1697 dbSNP
rs1298429327 1704 dbSNP
rs1312390057 1716 dbSNP
rs1448360810 1717 dbSNP
rs1376942297 1722 dbSNP
rs143006056 1728 dbSNP
rs867168778 1728 dbSNP
rs950047782 1728 dbSNP
rs574562957 1732 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions islets
Tools used in this research TargetScan
Original Description (Extracted from the article) ... HITS-CLIP data was present in Supplenentary. RNA binding protein: AGO. ...

- Kameswaran V; Bramswig NC; McKenna LB; Penn et al., 2014, Cell metabolism.

Article - Kameswaran V; Bramswig NC; McKenna LB; Penn et al.
- Cell metabolism, 2014
Type 2 diabetes mellitus (T2DM) is a complex disease characterized by the inability of the insulin-producing beta cells in the endocrine pancreas to overcome insulin resistance in peripheral tissues. To determine if microRNAs are involved in the pathogenesis of human T2DM, we sequenced the small RNAs of human islets from diabetic and nondiabetic organ donors. We identified a cluster of microRNAs in an imprinted locus on human chromosome 14q32 that is highly and specifically expressed in human beta cells and dramatically downregulated in islets from T2DM organ donors. The downregulation of this locus strongly correlates with hypermethylation of its promoter. Using HITS-CLIP for the essential RISC-component Argonaute, we identified disease-relevant targets of the chromosome 14q32 microRNAs, such as IAPP and TP53INP1, that cause increased beta cell apoptosis upon overexpression in human islets. Our results support a role for microRNAs and their epigenetic control by DNA methylation in the pathogenesis of T2DM.
LinkOut: [PMID: 24374217]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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