pre-miRNA Information
pre-miRNA hsa-mir-412   
Genomic Coordinates chr14: 101065447 - 101065537
Synonyms MIRN412, hsa-mir-412, MIR412
Description Homo sapiens miR-412 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-412-3p
Sequence 54| ACUUCACCUGGUCCACUAGCCGU |76
Evidence Not_experimental
Experiments
DRVs in miRNA
Mutant ID Mutant Position Mutant Source
rs61992671 18 GWAS
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs369997462 1 dbSNP
rs1439693090 7 dbSNP
rs1301668924 11 dbSNP
rs534204576 13 dbSNP
rs775386036 14 dbSNP
rs762832140 15 dbSNP
rs1203323285 16 dbSNP
rs61992671 18 dbSNP
rs1022012324 19 dbSNP
rs1207609936 20 dbSNP
rs139967426 21 dbSNP
rs539487075 22 dbSNP
Putative Targets

miRNA Expression profile
miRNAs in Extracellular Vesicles
Circulating MicroRNA Expression Profiling
Gene Information
Gene Symbol CSDE1   
Synonyms D1S155E, UNR
Description cold shock domain containing E1
Transcript NM_001007553   
Other Transcripts NM_001130523 , NM_007158   
Expression
Putative miRNA Targets on CSDE1
3'UTR of CSDE1
(miRNA target sites are highlighted)
>CSDE1|NM_001007553|3'UTR
   1 CCACATCCACAAAGCACACCATTAATCCACTATGATCAAGTTGGGGGGAATCTGGTGAAGGGTTCTGAATATCTCCCTCT
  81 TCATCCCTCCCGAAATCTGGAATACTTATTCTATTGAGCTATTACACCAGTTTTAACACCTTCCTCGTGTTATGTTTAAA
 161 AAAATAAATAAATTTAAGAAAACCATTTTAAATAATGCACAGTTGCAGCCTGGAAAAACTTAAGGTGGCGCCTTATAGTA
 241 TCAATTTTAGGAGCTTTATTTGGTGCATTTAACGCAACTGGTAATTGCAGAATCCACTTTGCCTGTGTAAGTGAAAAATA
 321 TAGACTGTTATCTTGTTGGCCCTATGAAATTCTGCACTTTTCATTATATACTCTACCTTCATTAATTACTTCTGGCAAGA
 401 TGTTCTGCCTTAGCACTCAGTTGCATTCTTTTCCTTTTTCTTCCTGTTCATTATGCTTTAATTCTGAGGACCATATGAGG
 481 GTAGAATATATTATCTTTTAAAAATTACAAAAATTTGTATAGGCAAACCATTTCTTAAAGTTGATGGCCAAATTTTAAAA
 561 TGTTATTTTTCATATCATTTATAATCTTGTCACAATCCACTTAAAGAAGTTTGGTTATATTTCAGTGAAAATTTTCTTCC
 641 AGAGTAGGTTTTTTTTCGTGGGTTGGGGGGTAACTTTACTACAATTAGTAAGTATGGTGCAGAATTTCATGCAAATGAGG
 721 AGTGCCAGCAGTGTGATAATTTAAACATATTTAAACAAAAACAAAAAAAATGAATGCACAAACTTGCTGCTGCTTAGATC
 801 ACTGCAGCTTCTAGGACCCGGTTTCTTTTACTGATTTAAAAACAAAACAAAAAAAAATAAAAAAGTTGTGCCTGAAATGA
 881 ATCTTGTTTTTTTTTATAAGTAGCCGCCTGGTTACTGTGTCCTGTAAAATACAGACACTTGACCCTTGGTGTAGCTTCTG
 961 TTCAACTTTATATCACGGGAATGGATGGGTCTGATTTCTTGGCCCTCTTCTTGAATTGGCCATATACAGGGTCCCTGGCC
1041 AGTGGACTGAAGGCTTTGTCTAAGATGACAAGGGTCAGCTCAGGGGATGTGGGGGAGGGCGGTTTTATCTTCCCCCTTGT
1121 CGTTTGAGGTTTTGATCTCTGGGTAAAGAGGCCGTTTATCTTTGTAAACACGAAACATTTTTGCTTTCTCCAGTTTTCTG
1201 TTAATGGCGAAAGAATGGAAGCGAATAAAGTTTTACTGATTTTTGAGACACTAGCAAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1
miRNA  3' ugcCGAUCACC--UGGUCCACUUCa 5'
             |:|:| ||  |:| ||||||| 
Target 5' caaGTTGGGGGGAATCTGGTGAAGg 3'
37 - 61 162.00 -20.00
2
miRNA  3' ugCCGAUCACCUGGUCCACUUCa 5'
            ||| |||||||    ||||| 
Target 5' ctGGCCAGTGGAC----TGAAGg 3'
1035 - 1053 121.00 -19.60
3
miRNA  3' ugCCGAUCACCU---GGUCCACUUCa 5'
            ||:|  | ||   |::||| ||| 
Target 5' gaGGTT--TTGATCTCTGGGTAAAGa 3'
1126 - 1149 121.00 -10.92
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
1202429 1210 ClinVar
COSN26972009 14 COSMIC
COSN26972006 43 COSMIC
COSN30182540 54 COSMIC
COSN30147120 57 COSMIC
COSN30521483 79 COSMIC
COSN26972014 80 COSMIC
COSN30447870 91 COSMIC
COSN30123779 92 COSMIC
COSN31522732 102 COSMIC
COSN18724860 158 COSMIC
COSN31595819 171 COSMIC
COSN27906568 401 COSMIC
COSN16183001 473 COSMIC
COSN26641552 623 COSMIC
COSN31551237 640 COSMIC
COSN31536082 672 COSMIC
COSN5999415 741 COSMIC
COSN31562594 743 COSMIC
COSN26574106 771 COSMIC
COSN15652873 848 COSMIC
COSN31513893 853 COSMIC
COSN26409972 865 COSMIC
COSN31563579 907 COSMIC
COSN28123271 1026 COSMIC
COSN24297534 1100 COSMIC
COSN31516857 1188 COSMIC
COSN31484342 1223 COSMIC
COSN16810712 1254 COSMIC
rs10489525 1191 GWAS
rs8453 1191 GWAS
rs926938 1191 GWAS
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs374095550 1 dbSNP
rs9724612 9 dbSNP
rs369948708 10 dbSNP
rs1181709750 12 dbSNP
rs183844328 12 dbSNP
rs1193459648 19 dbSNP
rs1189224149 21 dbSNP
rs1801909 28 dbSNP
rs777289026 32 dbSNP
rs753260110 33 dbSNP
rs1432985455 36 dbSNP
rs1322585894 42 dbSNP
rs1272676156 45 dbSNP
rs1226662164 46 dbSNP
rs766109129 47 dbSNP
rs755778971 48 dbSNP
rs770432178 49 dbSNP
rs750274957 51 dbSNP
rs9724613 52 dbSNP
rs1297785048 53 dbSNP
rs1388129426 55 dbSNP
rs1438639185 61 dbSNP
rs908473995 62 dbSNP
rs553300119 69 dbSNP
rs1047140469 71 dbSNP
rs930973617 91 dbSNP
rs9724614 92 dbSNP
rs191181816 100 dbSNP
rs994946001 104 dbSNP
rs748695142 109 dbSNP
rs552011956 113 dbSNP
rs987012996 117 dbSNP
rs1202388993 121 dbSNP
rs1245493445 123 dbSNP
rs1452782405 131 dbSNP
rs968012820 133 dbSNP
rs1488480090 134 dbSNP
rs1020549514 136 dbSNP
rs911582753 137 dbSNP
rs865798017 141 dbSNP
rs6851 147 dbSNP
rs1332179977 151 dbSNP
rs1414728363 154 dbSNP
rs957370625 158 dbSNP
rs1407158894 163 dbSNP
rs1321741201 164 dbSNP
rs1349356786 174 dbSNP
rs753894875 178 dbSNP
rs1034353619 198 dbSNP
rs989352745 202 dbSNP
rs1445708801 205 dbSNP
rs36070559 209 dbSNP
rs1284443377 210 dbSNP
rs569613546 219 dbSNP
rs1226257193 230 dbSNP
rs1288601563 230 dbSNP
rs143187563 236 dbSNP
rs1199856437 247 dbSNP
rs1240512846 253 dbSNP
rs1350288016 254 dbSNP
rs1456724783 260 dbSNP
rs1178339919 262 dbSNP
rs1278224330 263 dbSNP
rs1473929535 271 dbSNP
rs529640711 272 dbSNP
rs935170340 273 dbSNP
rs907314839 274 dbSNP
rs1466173377 280 dbSNP
rs1172759399 281 dbSNP
rs565950090 296 dbSNP
rs1322966479 300 dbSNP
rs1334653078 304 dbSNP
rs1459977562 309 dbSNP
rs1342032176 318 dbSNP
rs546876074 321 dbSNP
rs1391074212 323 dbSNP
rs370293634 323 dbSNP
rs1013433236 331 dbSNP
rs1340617483 332 dbSNP
rs764771811 340 dbSNP
rs971862057 342 dbSNP
rs1047014818 344 dbSNP
rs1279839554 352 dbSNP
rs1024271094 354 dbSNP
rs931256212 361 dbSNP
rs991435087 368 dbSNP
rs1175326987 370 dbSNP
rs898153119 371 dbSNP
rs528690599 373 dbSNP
rs1157019452 376 dbSNP
rs1478197616 381 dbSNP
rs1247262100 392 dbSNP
rs376078442 397 dbSNP
rs1465094686 399 dbSNP
rs1173071583 402 dbSNP
rs1027855617 403 dbSNP
rs546046078 416 dbSNP
rs1412492103 421 dbSNP
rs1466768857 422 dbSNP
rs1269585140 423 dbSNP
rs942427762 424 dbSNP
rs1333108211 428 dbSNP
rs1360689446 437 dbSNP
rs1401457861 444 dbSNP
rs185872129 444 dbSNP
rs995465331 447 dbSNP
rs1208970491 451 dbSNP
rs1227392961 453 dbSNP
rs1316642109 455 dbSNP
rs1199034790 471 dbSNP
rs1282579432 473 dbSNP
rs1279887581 479 dbSNP
rs1488780842 484 dbSNP
rs1219063467 492 dbSNP
rs1261190637 492 dbSNP
rs897998418 506 dbSNP
rs1199513211 508 dbSNP
rs563584650 519 dbSNP
rs1476919622 529 dbSNP
rs1171853473 535 dbSNP
rs1380665765 536 dbSNP
rs1008660858 537 dbSNP
rs1473897023 538 dbSNP
rs946245432 547 dbSNP
rs755356304 551 dbSNP
rs1386797888 561 dbSNP
rs1050112139 565 dbSNP
rs1333269694 566 dbSNP
rs913435872 572 dbSNP
rs1274824556 581 dbSNP
rs1438739811 591 dbSNP
rs1354843464 593 dbSNP
rs1242642350 595 dbSNP
rs990360457 595 dbSNP
rs957652301 605 dbSNP
rs1210436211 606 dbSNP
rs1034301199 609 dbSNP
rs1449850633 612 dbSNP
rs1434635332 617 dbSNP
rs1053711100 632 dbSNP
rs1343728064 636 dbSNP
rs1441272520 637 dbSNP
rs1156633272 648 dbSNP
rs1416012518 652 dbSNP
rs1425726155 654 dbSNP
rs935205831 656 dbSNP
rs1164565472 657 dbSNP
rs1172972107 658 dbSNP
rs980090099 659 dbSNP
rs1385644699 662 dbSNP
rs923816075 663 dbSNP
rs542289182 666 dbSNP
rs1249362568 671 dbSNP
rs1307350416 678 dbSNP
rs1316620327 684 dbSNP
rs574875543 686 dbSNP
rs1245776775 688 dbSNP
rs1267351981 692 dbSNP
rs1354299952 697 dbSNP
rs1213022836 700 dbSNP
rs371539180 705 dbSNP
rs762842125 717 dbSNP
rs1013797229 720 dbSNP
rs886942022 722 dbSNP
rs982321654 723 dbSNP
rs752020623 735 dbSNP
rs1176477655 739 dbSNP
rs1249554601 745 dbSNP
rs1424093962 750 dbSNP
rs1189167037 751 dbSNP
rs1240040528 756 dbSNP
rs950189312 758 dbSNP
rs1313172303 762 dbSNP
rs1280191182 764 dbSNP
rs917312461 765 dbSNP
rs199596172 766 dbSNP
rs767793974 767 dbSNP
rs1027574515 771 dbSNP
rs373000705 771 dbSNP
rs374332374 771 dbSNP
rs991487651 771 dbSNP
rs370476917 772 dbSNP
rs560558972 779 dbSNP
rs553336786 781 dbSNP
rs771596885 783 dbSNP
rs1232690839 787 dbSNP
rs753534125 797 dbSNP
rs1449908466 800 dbSNP
rs1039364864 804 dbSNP
rs1359533445 811 dbSNP
rs1250601483 815 dbSNP
rs1009462604 819 dbSNP
rs1312138090 820 dbSNP
rs890250544 832 dbSNP
rs942396836 835 dbSNP
rs1432772504 837 dbSNP
rs1253589455 839 dbSNP
rs1392019898 843 dbSNP
rs1474594759 843 dbSNP
rs1028740158 844 dbSNP
rs541309766 848 dbSNP
rs577033305 856 dbSNP
rs1354350300 858 dbSNP
rs1466827578 858 dbSNP
rs557719829 858 dbSNP
rs61764383 858 dbSNP
rs893478100 858 dbSNP
rs1427457220 859 dbSNP
rs890836948 862 dbSNP
rs1342430097 863 dbSNP
rs1183266243 865 dbSNP
rs1216766429 865 dbSNP
rs1294725849 865 dbSNP
rs1312583780 869 dbSNP
rs902413837 870 dbSNP
rs1046251132 873 dbSNP
rs949238241 881 dbSNP
rs1264752097 883 dbSNP
rs758716380 884 dbSNP
rs1486997920 886 dbSNP
rs1185309494 890 dbSNP
rs1419354479 891 dbSNP
rs916382276 893 dbSNP
rs1178776942 896 dbSNP
rs61764384 896 dbSNP
rs79884428 896 dbSNP
rs746214615 897 dbSNP
rs1362574445 899 dbSNP
rs1050870324 900 dbSNP
rs1288235166 905 dbSNP
rs750470887 906 dbSNP
rs1014209439 910 dbSNP
rs913395670 919 dbSNP
rs1054581411 922 dbSNP
rs1287658105 924 dbSNP
rs1209268444 932 dbSNP
rs1484307045 933 dbSNP
rs558730735 934 dbSNP
rs575288337 938 dbSNP
rs1226724533 960 dbSNP
rs536802381 963 dbSNP
rs936239511 965 dbSNP
rs1454079558 968 dbSNP
rs1159501072 970 dbSNP
rs1382346206 970 dbSNP
rs765361648 972 dbSNP
rs1158545849 974 dbSNP
rs1315031226 978 dbSNP
rs987692811 981 dbSNP
rs954865984 984 dbSNP
rs1029126167 987 dbSNP
rs1229115252 1004 dbSNP
rs1355127225 1005 dbSNP
rs1370005467 1007 dbSNP
rs1447171875 1013 dbSNP
rs1065634 1022 dbSNP
rs549309151 1024 dbSNP
rs1348182727 1027 dbSNP
rs1222837622 1028 dbSNP
rs535880949 1041 dbSNP
rs1322968500 1043 dbSNP
rs1801910 1044 dbSNP
rs12254 1047 dbSNP
rs1412745034 1049 dbSNP
rs957745618 1051 dbSNP
rs971424750 1053 dbSNP
rs917276899 1056 dbSNP
rs565317127 1061 dbSNP
rs1468332214 1068 dbSNP
rs983546722 1071 dbSNP
rs950891889 1074 dbSNP
rs999577626 1078 dbSNP
rs1298700046 1079 dbSNP
rs771399801 1084 dbSNP
rs1352261824 1085 dbSNP
rs1025461761 1087 dbSNP
rs1414663326 1089 dbSNP
rs1407104926 1091 dbSNP
rs1046734235 1094 dbSNP
rs1013418878 1096 dbSNP
rs1424014350 1099 dbSNP
rs546962160 1106 dbSNP
rs1466072223 1107 dbSNP
rs1333189337 1109 dbSNP
rs962593849 1114 dbSNP
rs1333746222 1115 dbSNP
rs775482433 1116 dbSNP
rs1416774137 1119 dbSNP
rs895002638 1120 dbSNP
rs1018213754 1121 dbSNP
rs1380742504 1122 dbSNP
rs1230866619 1125 dbSNP
rs1271836178 1125 dbSNP
rs1334823056 1127 dbSNP
rs1186233786 1134 dbSNP
rs528797826 1144 dbSNP
rs1054857672 1145 dbSNP
rs937457937 1148 dbSNP
rs1195740083 1149 dbSNP
rs920662157 1154 dbSNP
rs767399896 1156 dbSNP
rs759292396 1164 dbSNP
rs760471215 1168 dbSNP
rs1229688334 1175 dbSNP
rs1185984352 1179 dbSNP
rs1417235805 1184 dbSNP
rs1009975671 1188 dbSNP
rs1334403500 1189 dbSNP
rs8453 1191 dbSNP
rs1409107775 1192 dbSNP
rs1334419733 1193 dbSNP
rs1054524283 1198 dbSNP
rs552741102 1200 dbSNP
rs1412538270 1204 dbSNP
rs1292183518 1209 dbSNP
rs6694035 1210 dbSNP
rs1272380613 1213 dbSNP
rs1337867699 1216 dbSNP
rs1214281651 1220 dbSNP
rs1279777412 1221 dbSNP
rs927508713 1225 dbSNP
rs1352130555 1226 dbSNP
rs1208974725 1227 dbSNP
rs1044648601 1228 dbSNP
rs1256952564 1230 dbSNP
rs9724615 1240 dbSNP
rs917242694 1241 dbSNP
rs1195789831 1245 dbSNP
rs1371213463 1246 dbSNP
rs1474964933 1247 dbSNP
rs1173018655 1248 dbSNP
rs769343900 1250 dbSNP
rs113010659 1252 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
     
Conditions islets
Tools used in this research TargetScan
Original Description (Extracted from the article) ... HITS-CLIP data was present in Supplenentary. RNA binding protein: AGO. ...

- Kameswaran V; Bramswig NC; McKenna LB; Penn et al., 2014, Cell metabolism.

Article - Kameswaran V; Bramswig NC; McKenna LB; Penn et al.
- Cell metabolism, 2014
Type 2 diabetes mellitus (T2DM) is a complex disease characterized by the inability of the insulin-producing beta cells in the endocrine pancreas to overcome insulin resistance in peripheral tissues. To determine if microRNAs are involved in the pathogenesis of human T2DM, we sequenced the small RNAs of human islets from diabetic and nondiabetic organ donors. We identified a cluster of microRNAs in an imprinted locus on human chromosome 14q32 that is highly and specifically expressed in human beta cells and dramatically downregulated in islets from T2DM organ donors. The downregulation of this locus strongly correlates with hypermethylation of its promoter. Using HITS-CLIP for the essential RISC-component Argonaute, we identified disease-relevant targets of the chromosome 14q32 microRNAs, such as IAPP and TP53INP1, that cause increased beta cell apoptosis upon overexpression in human islets. Our results support a role for microRNAs and their epigenetic control by DNA methylation in the pathogenesis of T2DM.
LinkOut: [PMID: 24374217]
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
Click to see details
Click to see details
138 hsa-miR-412-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT005780 ACVR1C activin A receptor type 1C 1 1
MIRT062013 YOD1 YOD1 deubiquitinase 2 2
MIRT345112 ATXN7L3 ataxin 7 like 3 2 2
MIRT383735 EDEM3 ER degradation enhancing alpha-mannosidase like protein 3 2 2
MIRT396956 CELF1 CUGBP Elav-like family member 1 2 2
MIRT439280 XIAP X-linked inhibitor of apoptosis 1 1
MIRT439313 VAT1 vesicle amine transport 1 1 1
MIRT439375 TUBA1A tubulin alpha 1a 1 1
MIRT439418 TMOD1 tropomodulin 1 1 1
MIRT439503 SURF4 surfeit 4 1 1
MIRT439563 SON SON DNA binding protein 1 1
MIRT439598 SLC3A2 solute carrier family 3 member 2 1 1
MIRT439670 SETD1B SET domain containing 1B 1 1
MIRT439767 RMND5A required for meiotic nuclear division 5 homolog A 1 1
MIRT439922 PPL periplakin 1 1
MIRT439947 PLEKHA6 pleckstrin homology domain containing A6 1 1
MIRT439952 PLCB4 phospholipase C beta 4 1 1
MIRT439961 PKD1 polycystin 1, transient receptor potential channel interacting 1 1
MIRT440005 PEG3 paternally expressed 3 1 1
MIRT440061 OSBPL8 oxysterol binding protein like 8 1 1
MIRT440166 MYH14 myosin heavy chain 14 1 1
MIRT440276 MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1 1 1
MIRT440437 IPO13 importin 13 1 1
MIRT440441 INTS3 integrator complex subunit 3 1 1
MIRT440448 INS insulin 1 1
MIRT440461 IGF2R insulin like growth factor 2 receptor 1 1
MIRT440472 IARS isoleucyl-tRNA synthetase 1 1
MIRT440530 GUCY1A3 guanylate cyclase 1 soluble subunit alpha 1 1
MIRT440542 GOLGA2 golgin A2 1 1
MIRT440569 GIGYF1 GRB10 interacting GYF protein 1 1 1
MIRT440608 FTSJD2 cap methyltransferase 1 1 1
MIRT440750 EEF1A2 eukaryotic translation elongation factor 1 alpha 2 1 1
MIRT440781 DOT1L DOT1 like histone lysine methyltransferase 1 1
MIRT440804 DNAJA4 DnaJ heat shock protein family (Hsp40) member A4 1 1
MIRT440867 CSDE1 cold shock domain containing E1 1 1
MIRT440890 CPEB4 cytoplasmic polyadenylation element binding protein 4 1 1
MIRT440917 COL1A1 collagen type I alpha 1 chain 1 1
MIRT440967 CDH22 cadherin 22 1 1
MIRT440968 CDH2 cadherin 2 1 1
MIRT441024 CALR calreticulin 1 1
MIRT441278 ACTB actin beta 1 1
MIRT448421 TNFAIP3 TNF alpha induced protein 3 2 2
MIRT462833 BCL3 B-cell CLL/lymphoma 3 2 2
MIRT465062 TSR1 TSR1, ribosome maturation factor 2 2
MIRT476050 GRSF1 G-rich RNA sequence binding factor 1 2 2
MIRT485318 MZT1 mitotic spindle organizing protein 1 2 4
MIRT493584 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 2 6
MIRT494567 BAK1 BCL2 antagonist/killer 1 2 2
MIRT497393 RALY RALY heterogeneous nuclear ribonucleoprotein 2 2
MIRT503250 ZNF257 zinc finger protein 257 2 10
MIRT503656 ZNF138 zinc finger protein 138 2 10
MIRT505882 RNF219 ring finger protein 219 2 2
MIRT507525 DSTN destrin, actin depolymerizing factor 2 4
MIRT510663 TMBIM6 transmembrane BAX inhibitor motif containing 6 2 4
MIRT514682 ZNF701 zinc finger protein 701 2 4
MIRT515370 ZNF208 zinc finger protein 208 2 6
MIRT525237 KCNJ12 potassium voltage-gated channel subfamily J member 12 2 2
MIRT527963 MTAP methylthioadenosine phosphorylase 2 2
MIRT528482 STAMBPL1 STAM binding protein like 1 2 2
MIRT529909 C1orf64 steroid receptor associated and regulated protein 2 4
MIRT531558 SRD5A1 steroid 5 alpha-reductase 1 2 2
MIRT532234 KLF2 Kruppel like factor 2 2 4
MIRT532480 HOXA13 homeobox A13 2 2
MIRT535544 P2RY2 purinergic receptor P2Y2 2 2
MIRT547311 NR1D2 nuclear receptor subfamily 1 group D member 2 2 2
MIRT551795 ZNF117 zinc finger protein 117 2 4
MIRT554939 RAP1A RAP1A, member of RAS oncogene family 2 2
MIRT558171 EIF5A2 eukaryotic translation initiation factor 5A2 2 2
MIRT568771 LY6K lymphocyte antigen 6 family member K 2 2
MIRT570766 ZNF99 zinc finger protein 99 2 2
MIRT572405 MRPS14 mitochondrial ribosomal protein S14 2 2
MIRT573396 DLC1 DLC1 Rho GTPase activating protein 2 2
MIRT610403 RXRB retinoid X receptor beta 2 2
MIRT610886 SCN8A sodium voltage-gated channel alpha subunit 8 2 2
MIRT611197 TMEM105 transmembrane protein 105 2 2
MIRT611244 ZNF550 zinc finger protein 550 2 2
MIRT615669 LRIG2 leucine rich repeats and immunoglobulin like domains 2 2 4
MIRT617974 DOCK4 dedicator of cytokinesis 4 2 2
MIRT619150 ZNF326 zinc finger protein 326 2 2
MIRT619608 MKKS McKusick-Kaufman syndrome 2 2
MIRT621053 DGKD diacylglycerol kinase delta 2 2
MIRT623665 HRK harakiri, BCL2 interacting protein 2 2
MIRT624883 AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 2 2
MIRT624939 MARCH2 membrane associated ring-CH-type finger 2 2 2
MIRT634198 TMOD2 tropomodulin 2 2 4
MIRT636727 AGO2 argonaute 2, RISC catalytic component 2 2
MIRT637741 POLR3K RNA polymerase III subunit K 2 2
MIRT638002 ZC3H13 zinc finger CCCH-type containing 13 2 2
MIRT640395 ZNF785 zinc finger protein 785 2 2
MIRT640505 ANTXR1 anthrax toxin receptor 1 2 2
MIRT641293 SLAMF1 signaling lymphocytic activation molecule family member 1 2 2
MIRT641863 STOML1 stomatin like 1 2 2
MIRT642600 C14orf180 chromosome 14 open reading frame 180 2 2
MIRT642895 CASP1 caspase 1 2 2
MIRT643967 FHL2 four and a half LIM domains 2 2 4
MIRT645237 KCTD12 potassium channel tetramerization domain containing 12 2 2
MIRT646621 CENPL centromere protein L 2 2
MIRT648620 CYB561A3 cytochrome b561 family member A3 2 2
MIRT648908 ZNF551 zinc finger protein 551 2 2
MIRT649439 HIBADH 3-hydroxyisobutyrate dehydrogenase 2 2
MIRT650637 LTF lactotransferrin 2 2
MIRT650971 STARD3NL STARD3 N-terminal like 2 2
MIRT651067 ZNF518B zinc finger protein 518B 2 4
MIRT652384 TMEM55A phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2 2
MIRT653958 SEPN1 selenoprotein N 2 2
MIRT656885 KIF1C kinesin family member 1C 2 2
MIRT657965 GAPVD1 GTPase activating protein and VPS9 domains 1 2 2
MIRT658080 FOXR2 forkhead box R2 2 2
MIRT662570 IL2RA interleukin 2 receptor subunit alpha 2 2
MIRT663089 METTL10 EEF1A lysine methyltransferase 2 2 2
MIRT683705 ZNF195 zinc finger protein 195 2 2
MIRT683835 ZNF682 zinc finger protein 682 2 2
MIRT706811 APOL4 apolipoprotein L4 2 2
MIRT707575 DYNC2LI1 dynein cytoplasmic 2 light intermediate chain 1 2 2
MIRT708606 ZNF260 zinc finger protein 260 2 2
MIRT708859 TMSB4X thymosin beta 4, X-linked 2 2
MIRT709861 PDIK1L PDLIM1 interacting kinase 1 like 2 2
MIRT709987 RBM41 RNA binding motif protein 41 2 2
MIRT710098 KPNA5 karyopherin subunit alpha 5 2 2
MIRT710211 ENAH ENAH, actin regulator 2 2
MIRT710868 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) 2 2
MIRT710986 SUSD5 sushi domain containing 5 2 2
MIRT711460 RNF145 ring finger protein 145 2 2
MIRT712302 PGM2L1 phosphoglucomutase 2 like 1 2 2
MIRT713609 SYTL4 synaptotagmin like 4 2 2
MIRT713789 MAK16 MAK16 homolog 2 2
MIRT715480 MYO9B myosin IXB 2 2
MIRT716328 POU5F1 POU class 5 homeobox 1 2 2
MIRT717252 TMEM246 transmembrane protein 246 2 2
MIRT718077 CLIC5 chloride intracellular channel 5 2 2
MIRT718463 EED embryonic ectoderm development 2 2
MIRT718645 NKPD1 NTPase KAP family P-loop domain containing 1 2 2
MIRT718982 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 2
MIRT721078 RPS9 ribosomal protein S9 2 2
MIRT721419 SEC24A SEC24 homolog A, COPII coat complex component 2 2
MIRT721863 CENPJ centromere protein J 2 2
MIRT722492 PNKD paroxysmal nonkinesigenic dyskinesia 2 2
MIRT723391 CALN1 calneuron 1 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-412 Gemcitabine approved 60750 Northern blot Mz-ChA-1 human cholangiocarcinoma cell lines 16762633 2006 down-regulated
miR-412 Progesterone approved 5994 Microarray Breast cancer 22330642 2012 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-412 Androstenedione 6128 NSC9563 sensitive cell line (MCF-7)
hsa-mir-412 Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)
hsa-miR-412-3p Verapamil 2520 NSC272366 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved resistant High Breast Cancer cell line (MCF-7)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved resistant High Colorectal Cancer cell line (RKO)
hsa-miR-412-3p Oxaliplatin 6857599 NSC266046 approved sensitive High Colorectal Cancer cell line (HCT-116)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive High Ovarian Cancer cell line (A2780)
hsa-miR-412-3p Doxorubicin 31703 NSC123127 approved sensitive High Anaplastic Thyroid Cancer tissue
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM36)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM47)
hsa-miR-412-3p Vemurafenib 42611257 NSC761431 approved resistant cell line (LM43)
hsa-miR-412-3p Sunitinib 5329102 NSC750690 approved resistant tissue (CardA)
hsa-miR-412-3p Paclitaxel 36314 NSC125973 approved sensitive cell line (SKOV3)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-412-3p Cisplatin 5460033 NSC119875 approved sensitive cell line (A549)
hsa-miR-412-3p Gemcitabine 60750 NSC613327 approved sensitive cell line (Panc1-GR1)
hsa-miR-412-3p Ceritinib 57379345 NSC776422 approved resistant cell line (H3122)

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