miRTarBase - #MIRT441540


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pre-miRNA Information
pre-miRNA hsa-mir-4731   
Genomic Coordinates chr17: 15251627 - 15251696
Description Homo sapiens miR-4731 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4731-5p
Sequence 10| UGCUGGGGGCCACAUGAGUGUG |31
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1295173963 9 dbSNP
rs1227560397 15 dbSNP
rs972231157 18 dbSNP
Putative Targets

Gene Information
Gene Symbol CHD7   
Synonyms CRG, HH5, IS3, KAL5
Description chromodomain helicase DNA binding protein 7
Transcript NM_017780   
Expression
Putative miRNA Targets on CHD7
3'UTR of CHD7
(miRNA target sites are highlighted)		 
>CHD7|NM_017780|3'UTR
   1 CCAGTACCAGTTCCAGTTCAAGTGTTTAAAACTTTTGACAAGTGGTAGTCCTACTGTTTACACTCACAGTTAATGTTCAT
  81 ACCTAGTTTTATAAGCTGTTCTGTAACATAGTGTAGCAAAAAAAAAAGTTCAAGTCATGTTATACAGGTGTGTCAAAAGG
 161 TATCTTGGTCATTAAGTATTGTGCAGTGCATTATTTATTATCCCTAGGAGAGATGAAATTTGAGAGGTGATCATGTCTTT
 241 TTAAGGAAACTTACATAATGCTCTGCTTTTTTTTTTTCTCTTGGTACCATTGGTATTATAATAAAGAGCAATTTGTAACT
 321 GAGTGGCACTAATGGAAGAAAGTGCTGCTCAAAGGAAGTATGAAGTTATATATTTAATTTTTTAATTTTAATTTTTAATT
 401 TTTTTGCTGTGAAGGTCAAGCTGAAATTTACCATACATATCATACTTGCTCATTTGTTTCCCTTTTTGACTGTATGGGGG
 481 TTCCCACACTCGTGCATACACACACATCCATACACTCTGACAATCTCCACGCTAGTGTGAACGCCTCTGTCCCGAGGCGC
 561 AGCAATAATAAGGCAGCTGTTGAATGTGAAGGGTCCCTTTGGAAAATTAACCTACTGGGAGGGTTCTTGCCAGACAGAAC
 641 TACAGTTCCATTGTCTCGTGGTCTTGTAATGCACTGGTAAAAACAAAATAAATAGATGAATAAATAAAGAGTGAGAGAAG
 721 AGAGAATCAGGTACCTTTTTTAAATTAAAGGACTTTGTTACTTTAGCCACAAAGCTAAAACAGCATTACCTCAGCTCTAA
 801 ACTAGCCTTGAAGTTTACAGACATGACTTTGTAAATGTATTGTTTTTCTTTGTTGTGATGTCCTTTTATTTTTTTCTTTG
 881 AAAACTGCTATCATGTAAGATAAAATGTAAATTGCTGCCAACTGTAGTAATGATGCTTTTAATAAAAGTGACCCATGATA
 961 TGCAGAGATGTAATTATAGAATGTAGTATATAGGGAAACTGGTGTTCACTCTATTTTTTTTGTATTCGCAATAGATGCAA
1041 ATACAGCATTCTGGCTTTTGTACAGTTTCTTGATATATCCTCTTATACTAGATTAGCTTTTGGTAAGACACTAAACTGTC
1121 TCGAAGACTAGACAGGAAGGAAAACCTTGAATTACTCTCACATAATTCCACTCCAGATATCTCAACAGAAATGCATACAA
1201 AAAGCTCCTATTACTCCCTCAAAAGGGCATCTGAGACCGAGAATACTTAGAAATGTGTGCAGCGTGTGATAATGTGGTAC
1281 ACTGAAGAACAAAAGGGCAAAAGAAAAATGAGGCTTTAACAGGCACAATATCTAGGTCATTTATCCTTGGTTAATGGGTA
1361 GAAAAACACAATGCGGTAGTGTCAGCAAGGGACACAAAGGCACTCTGGTGTCCTGCAGACCAGCGCTCGATGCCAGAAAC
1441 CAGTGTGTGGAAAAACCCATGTGGAATTGAAACAGACCCACTTAAGCACGCACGCGCGCACGCACGGTCTCAGGAGCTAC
1521 TGATTTGTGGACCCCTTTTTGACCTTTGGTATTTAAAGTAAAATATAATTTGAGATCTACTGTTTTCACCTTTTTATGTC
1601 ACCTGAACCAACACAAAGCCATATTTCCATCCAGTTAAAAAGCAGGGGAAGGGATGTGGACGAGAGTGTTTCGTGTGTGT
1681 TGCCTTCCTCCACACCCTTCCCCCAGGACGTCCGCACACAGTCCACCTCCAGCCAGTGTGCTGCCAGACAGGTGGTCTAA
1761 ATTCCTCCCAGACTGTGAGATTCAGTTCGTTTATGCCCCAAGATGAAAATATGCCCCTTAATGATTCTGGGAAAGAAACA
1841 ACCTGAACCCTCCACCTTACAGATCCTGTGATTGCTTTTATTTATCATCGTCGTTGTCTGCTGAAAGTGAATGGGCCGTG
1921 CACACTGGAGGAAAGTGCCTTGAAGAGAATATTTTTTGAAAGGGAATTATTTGAACACGGGAAAGTGAAACTAGGTCTGC
2001 ATGAAGTATAGGAAATTTAAGTATTTAAGTAACAAAGATGTTAGCAGGGAGAATTTGCTTAATAAAATGAGTCATTAAAG
2081 GGTGTTTTTTTTAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' guGUGAGUACA-CCGGGGGUCGu 5'
            ||| || ||   ||:||||| 
Target 5' cgCACACA-GTCCACCTCCAGCc 3'
 1713 - 1734 139.00 -19.70
2 
miRNA  3' guGUGAGUACACCGGGGGUCgu 5'
            ||| | |    |||||||  
Target 5' caCACCCTT----CCCCCAGga 3'
 1691 - 1708 130.00 -18.30
3 
miRNA  3' gugugaguacaccgGGGGUCGu 5'
                        ||:|||| 
Target 5' ctaaaacagcattaCCTCAGCt 3'
 775 - 796 124.00 -12.60
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
363489 20 ClinVar
909816 22 ClinVar
363490 97 ClinVar
909817 109 ClinVar
363491 118 ClinVar
909818 167 ClinVar
909819 191 ClinVar
363492 252 ClinVar
363493 294 ClinVar
363494 338 ClinVar
909820 490 ClinVar
363495 506 ClinVar
910720 528 ClinVar
910721 543 ClinVar
363496 623 ClinVar
910722 645 ClinVar
363497 660 ClinVar
363498 732 ClinVar
363499 840 ClinVar
363500 966 ClinVar
911937 1117 ClinVar
911938 1121 ClinVar
911939 1124 ClinVar
911940 1144 ClinVar
363501 1190 ClinVar
911941 1375 ClinVar
363502 1445 ClinVar
363503 1470 ClinVar
363504 1496 ClinVar
363505 1503 ClinVar
363506 1578 ClinVar
363507 1580 ClinVar
909015 1629 ClinVar
363508 1645 ClinVar
363509 1662 ClinVar
909016 1680 ClinVar
363510 1699 ClinVar
363511 1729 ClinVar
909879 1738 ClinVar
363512 1789 ClinVar
363513 1798 ClinVar
909880 1805 ClinVar
363514 1833 ClinVar
910777 2058 ClinVar
COSN31521001 90 COSMIC
COSN20105529 128 COSMIC
COSN31588673 165 COSMIC
COSN31491301 267 COSMIC
COSN27440234 278 COSMIC
COSN27582901 278 COSMIC
COSN15661947 279 COSMIC
COSN31580144 355 COSMIC
COSN30542893 461 COSMIC
COSN31539348 510 COSMIC
COSN14893466 558 COSMIC
COSN31590449 578 COSMIC
COSN30158334 762 COSMIC
COSN31549544 790 COSMIC
COSN31480643 811 COSMIC
COSN31541683 916 COSMIC
COSN31778683 942 COSMIC
COSN26195187 1029 COSMIC
COSN5685229 1272 COSMIC
COSN16464998 1507 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1160698916 1 dbSNP
rs1196787650 2 dbSNP
rs755209060 3 dbSNP
rs1439669224 4 dbSNP
rs1251391942 9 dbSNP
rs1404868734 12 dbSNP
rs1162707361 13 dbSNP
rs988679488 13 dbSNP
rs1351591189 14 dbSNP
rs773033670 15 dbSNP
rs1282108365 17 dbSNP
rs1441503161 18 dbSNP
rs1330503724 19 dbSNP
rs371417969 20 dbSNP
rs562150983 21 dbSNP
rs1279774618 22 dbSNP
rs1355152920 23 dbSNP
rs1226169555 30 dbSNP
rs1273035176 34 dbSNP
rs748537725 36 dbSNP
rs1324096546 37 dbSNP
rs1231653122 43 dbSNP
rs1335810032 50 dbSNP
rs1161719546 70 dbSNP
rs921675731 83 dbSNP
rs188131003 87 dbSNP
rs372636798 96 dbSNP
rs193154029 97 dbSNP
rs941581933 102 dbSNP
rs1471472425 103 dbSNP
rs1037234021 104 dbSNP
rs1412783180 109 dbSNP
rs1444552975 110 dbSNP
rs1307895948 111 dbSNP
rs199823121 117 dbSNP
rs11322994 118 dbSNP
rs1181640011 118 dbSNP
rs1441598724 118 dbSNP
rs1471698711 118 dbSNP
rs886063043 118 dbSNP
rs950218079 118 dbSNP
rs1382941661 125 dbSNP
rs1276300497 130 dbSNP
rs1206810277 135 dbSNP
rs1246511134 138 dbSNP
rs1263261108 143 dbSNP
rs540143684 145 dbSNP
rs1355240254 146 dbSNP
rs978141050 151 dbSNP
rs1196677704 154 dbSNP
rs35932380 155 dbSNP
rs1351394475 157 dbSNP
rs1045828796 167 dbSNP
rs1226056409 170 dbSNP
rs1280109503 177 dbSNP
rs1260408644 187 dbSNP
rs1356924002 188 dbSNP
rs1032110611 191 dbSNP
rs1316126405 194 dbSNP
rs1293564341 208 dbSNP
rs1456812627 210 dbSNP
rs184367600 214 dbSNP
rs957998342 216 dbSNP
rs1332678848 228 dbSNP
rs990620475 233 dbSNP
rs1402953654 243 dbSNP
rs1216789103 246 dbSNP
rs529121143 252 dbSNP
rs1455737712 259 dbSNP
rs776103893 263 dbSNP
rs949219667 263 dbSNP
rs1257308620 264 dbSNP
rs1010597613 267 dbSNP
rs796235452 267 dbSNP
rs982030205 278 dbSNP
rs1185552324 279 dbSNP
rs1368047134 281 dbSNP
rs1475873310 283 dbSNP
rs1171111094 284 dbSNP
rs1402280598 285 dbSNP
rs1247368719 288 dbSNP
rs1206240154 290 dbSNP
rs1336258917 291 dbSNP
rs886063044 294 dbSNP
rs550727321 299 dbSNP
rs1353908763 307 dbSNP
rs1282723149 309 dbSNP
rs558524969 312 dbSNP
rs965905803 320 dbSNP
rs929347662 321 dbSNP
rs1366501516 326 dbSNP
rs1048170954 338 dbSNP
rs886063045 338 dbSNP
rs975903884 354 dbSNP
rs1028751380 359 dbSNP
rs887883768 369 dbSNP
rs1165654288 370 dbSNP
rs1404916652 371 dbSNP
rs1330653650 378 dbSNP
rs562875420 380 dbSNP
rs1411916631 384 dbSNP
rs1402854264 395 dbSNP
rs953227569 402 dbSNP
rs760157005 427 dbSNP
rs942061081 438 dbSNP
rs753880002 448 dbSNP
rs1469815158 449 dbSNP
rs1246784017 452 dbSNP
rs961719628 453 dbSNP
rs1339451597 454 dbSNP
rs1449463658 458 dbSNP
rs1274710467 464 dbSNP
rs533480672 468 dbSNP
rs1297400472 471 dbSNP
rs189116758 471 dbSNP
rs997669300 475 dbSNP
rs973000300 478 dbSNP
rs1280483473 480 dbSNP
rs1435878631 482 dbSNP
rs1348315935 492 dbSNP
rs750748561 493 dbSNP
rs142776482 494 dbSNP
rs1045838280 499 dbSNP
rs1484528552 504 dbSNP
rs886063046 506 dbSNP
rs1032388204 507 dbSNP
rs1198746460 515 dbSNP
rs937393748 522 dbSNP
rs1190078329 523 dbSNP
rs957813543 526 dbSNP
rs1011990961 528 dbSNP
rs1234159352 531 dbSNP
rs1205407304 532 dbSNP
rs755854277 538 dbSNP
rs565543543 543 dbSNP
rs981892891 545 dbSNP
rs918532070 546 dbSNP
rs951348008 554 dbSNP
rs534176166 555 dbSNP
rs1041689383 558 dbSNP
rs549459353 559 dbSNP
rs942000723 560 dbSNP
rs111644360 566 dbSNP
rs1378061704 567 dbSNP
rs1305894345 569 dbSNP
rs1436386913 589 dbSNP
rs1028803635 597 dbSNP
rs1175242156 598 dbSNP
rs1412743796 610 dbSNP
rs921990964 614 dbSNP
rs1409523403 616 dbSNP
rs754902789 618 dbSNP
rs1472027340 619 dbSNP
rs886063047 623 dbSNP
rs1052334323 632 dbSNP
rs902772549 633 dbSNP
rs779551569 645 dbSNP
rs1016014431 649 dbSNP
rs962048814 658 dbSNP
rs1257007392 659 dbSNP
rs886063048 660 dbSNP
rs1311030011 661 dbSNP
rs1270024347 673 dbSNP
rs1229106784 677 dbSNP
rs1350055377 678 dbSNP
rs748838706 679 dbSNP
rs1416905834 681 dbSNP
rs1379605869 685 dbSNP
rs768187882 695 dbSNP
rs1302112560 696 dbSNP
rs1300549327 699 dbSNP
rs1445642227 706 dbSNP
rs918841637 707 dbSNP
rs1400950467 709 dbSNP
rs778348155 711 dbSNP
rs1400194138 713 dbSNP
rs971598040 718 dbSNP
rs748100884 727 dbSNP
rs778600950 731 dbSNP
rs886063049 732 dbSNP
rs1211365666 733 dbSNP
rs56180571 737 dbSNP
rs981588362 746 dbSNP
rs1023364450 751 dbSNP
rs1181648348 757 dbSNP
rs567927898 759 dbSNP
rs1250472691 761 dbSNP
rs1209943209 762 dbSNP
rs773130659 765 dbSNP
rs760360912 776 dbSNP
rs538090876 777 dbSNP
rs1003346329 778 dbSNP
rs1054984963 786 dbSNP
rs534472102 795 dbSNP
rs1266375454 796 dbSNP
rs1025868039 803 dbSNP
rs1314447549 821 dbSNP
rs1322557284 833 dbSNP
rs1311672644 840 dbSNP
rs886063050 840 dbSNP
rs1231793068 843 dbSNP
rs1321106086 843 dbSNP
rs951334081 847 dbSNP
rs556734086 853 dbSNP
rs1385791801 865 dbSNP
rs1327412023 869 dbSNP
rs1354568105 869 dbSNP
rs946036285 871 dbSNP
rs984486591 876 dbSNP
rs1218922718 883 dbSNP
rs770090961 890 dbSNP
rs1261257326 921 dbSNP
rs1041699134 923 dbSNP
rs1189756492 928 dbSNP
rs1464893301 932 dbSNP
rs1488086893 937 dbSNP
rs1246193868 945 dbSNP
rs4563927 959 dbSNP
rs1267866244 960 dbSNP
rs1265115440 963 dbSNP
rs575515698 966 dbSNP
rs1050348458 968 dbSNP
rs888988252 971 dbSNP
rs1362953490 976 dbSNP
rs1302693783 989 dbSNP
rs1006046408 993 dbSNP
rs1389520676 1003 dbSNP
rs1291404120 1004 dbSNP
rs974715763 1011 dbSNP
rs1016436927 1014 dbSNP
rs1169625490 1014 dbSNP
rs1449329764 1014 dbSNP
rs922023880 1017 dbSNP
rs1201038099 1019 dbSNP
rs1376552599 1023 dbSNP
rs993142489 1025 dbSNP
rs76200731 1028 dbSNP
rs933357432 1029 dbSNP
rs1484198730 1039 dbSNP
rs539146593 1064 dbSNP
rs763215512 1074 dbSNP
rs970354140 1077 dbSNP
rs1358170715 1083 dbSNP
rs1233937265 1087 dbSNP
rs1329983697 1089 dbSNP
rs1399074938 1091 dbSNP
rs1051939175 1092 dbSNP
rs1350740652 1095 dbSNP
rs1308962131 1104 dbSNP
rs45504193 1117 dbSNP
rs572548208 1121 dbSNP
rs1174806322 1123 dbSNP
rs77847411 1124 dbSNP
rs1377136530 1127 dbSNP
rs1196853406 1130 dbSNP
rs45573835 1144 dbSNP
rs947741971 1146 dbSNP
rs1044684943 1147 dbSNP
rs1355089969 1165 dbSNP
rs1252842680 1176 dbSNP
rs185002882 1180 dbSNP
rs906302372 1181 dbSNP
rs1181144422 1187 dbSNP
rs1003666065 1189 dbSNP
rs4738834 1190 dbSNP
rs1280537157 1192 dbSNP
rs562725109 1194 dbSNP
rs767897087 1195 dbSNP
rs886968495 1196 dbSNP
rs1005365281 1206 dbSNP
rs1017279733 1208 dbSNP
rs946088512 1211 dbSNP
rs963926594 1218 dbSNP
rs533114277 1221 dbSNP
rs867896862 1233 dbSNP
rs1353238195 1239 dbSNP
rs1222668644 1240 dbSNP
rs1287287751 1242 dbSNP
rs977492749 1244 dbSNP
rs750848366 1246 dbSNP
rs1336633929 1254 dbSNP
rs756404548 1255 dbSNP
rs1265778225 1256 dbSNP
rs545558594 1264 dbSNP
rs1189272672 1265 dbSNP
rs923293026 1274 dbSNP
rs933306647 1283 dbSNP
rs1050808557 1287 dbSNP
rs1468854390 1300 dbSNP
rs1238988032 1308 dbSNP
rs780427369 1311 dbSNP
rs1440255735 1313 dbSNP
rs1028959036 1315 dbSNP
rs1254046620 1325 dbSNP
rs1179958376 1329 dbSNP
rs941862726 1339 dbSNP
rs1037516641 1341 dbSNP
rs1378021134 1344 dbSNP
rs746669856 1346 dbSNP
rs577640263 1347 dbSNP
rs897593328 1350 dbSNP
rs1226119093 1364 dbSNP
rs776228812 1366 dbSNP
rs993236340 1367 dbSNP
rs954689898 1368 dbSNP
rs1351282001 1375 dbSNP
rs1024660546 1377 dbSNP
rs1320055881 1379 dbSNP
rs1399165301 1384 dbSNP
rs1416296382 1385 dbSNP
rs906246753 1396 dbSNP
rs189373358 1398 dbSNP
rs1383181004 1415 dbSNP
rs1293316444 1425 dbSNP
rs1465294989 1426 dbSNP
rs1378218804 1429 dbSNP
rs987993838 1430 dbSNP
rs1213104184 1439 dbSNP
rs1452951461 1442 dbSNP
rs1307168489 1444 dbSNP
rs4237040 1445 dbSNP
rs1229079985 1447 dbSNP
rs1313386718 1454 dbSNP
rs1231256686 1458 dbSNP
rs935522977 1464 dbSNP
rs886063051 1470 dbSNP
rs34549674 1477 dbSNP
rs549341863 1480 dbSNP
rs1296942934 1484 dbSNP
rs1428771605 1484 dbSNP
rs567517348 1485 dbSNP
rs1320174671 1489 dbSNP
rs867318605 1490 dbSNP
rs532051565 1491 dbSNP
rs1363411749 1493 dbSNP
rs1458156592 1494 dbSNP
rs375368776 1495 dbSNP
rs139790301 1496 dbSNP
rs1235808412 1497 dbSNP
rs1389529717 1497 dbSNP
rs778401474 1498 dbSNP
rs16926517 1499 dbSNP
rs906249791 1501 dbSNP
rs939024818 1502 dbSNP
rs181017286 1503 dbSNP
rs1290031232 1505 dbSNP
rs886836825 1506 dbSNP
rs1343463744 1507 dbSNP
rs1401562531 1508 dbSNP
rs557479975 1512 dbSNP
rs933316400 1513 dbSNP
rs555319806 1519 dbSNP
rs568692699 1520 dbSNP
rs1005809440 1522 dbSNP
rs1016742173 1528 dbSNP
rs899753639 1534 dbSNP
rs1309596454 1536 dbSNP
rs1400240036 1539 dbSNP
rs1459795795 1557 dbSNP
rs1168169201 1560 dbSNP
rs986111242 1560 dbSNP
rs772091858 1564 dbSNP
rs1425174232 1566 dbSNP
rs566210469 1570 dbSNP
rs886063052 1578 dbSNP
rs10100774 1580 dbSNP
rs1228031524 1581 dbSNP
rs746921313 1582 dbSNP
rs1253580973 1584 dbSNP
rs1292416344 1585 dbSNP
rs1318399801 1586 dbSNP
rs1029576274 1591 dbSNP
rs143649870 1597 dbSNP
rs1232679928 1609 dbSNP
rs954722363 1613 dbSNP
rs987472682 1614 dbSNP
rs897686710 1620 dbSNP
rs770652301 1622 dbSNP
rs929138052 1623 dbSNP
rs956785378 1629 dbSNP
rs1290402123 1630 dbSNP
rs1238757734 1631 dbSNP
rs573529626 1632 dbSNP
rs1482066490 1638 dbSNP
rs1296241474 1640 dbSNP
rs886063053 1645 dbSNP
rs906256400 1657 dbSNP
rs1174713651 1662 dbSNP
rs761460675 1662 dbSNP
rs886063054 1662 dbSNP
rs1159369644 1673 dbSNP
rs990064408 1674 dbSNP
rs1175906561 1677 dbSNP
rs1484512188 1680 dbSNP
rs1011857085 1681 dbSNP
rs573674506 1683 dbSNP
rs1424756068 1697 dbSNP
rs544498983 1699 dbSNP
rs1270102368 1704 dbSNP
rs763271819 1710 dbSNP
rs556456951 1711 dbSNP
rs867002990 1714 dbSNP
rs371370172 1715 dbSNP
rs1423449277 1716 dbSNP
rs1379666309 1727 dbSNP
rs2280917 1729 dbSNP
rs774630532 1732 dbSNP
rs1046697449 1739 dbSNP
rs545202022 1764 dbSNP
rs941080028 1768 dbSNP
rs186498082 1769 dbSNP
rs1361752780 1775 dbSNP
rs1157335353 1778 dbSNP
rs1425880329 1782 dbSNP
rs1415003810 1783 dbSNP
rs527801100 1789 dbSNP
rs899701462 1790 dbSNP
rs1249973630 1794 dbSNP
rs1401548514 1795 dbSNP
rs1209497688 1797 dbSNP
rs6985168 1798 dbSNP
rs1259146487 1802 dbSNP
rs973384265 1805 dbSNP
rs1322040212 1811 dbSNP
rs1051032619 1812 dbSNP
rs1243677822 1813 dbSNP
rs1219805809 1822 dbSNP
rs919167037 1824 dbSNP
rs1280085160 1828 dbSNP
rs929147832 1829 dbSNP
rs886063055 1833 dbSNP
rs1294871417 1836 dbSNP
rs1458105851 1841 dbSNP
rs891022044 1844 dbSNP
rs1309979695 1847 dbSNP
rs1163413644 1855 dbSNP
rs561335190 1857 dbSNP
rs1423273576 1860 dbSNP
rs1046174537 1866 dbSNP
rs1189814106 1877 dbSNP
rs1009327487 1881 dbSNP
rs1427946894 1887 dbSNP
rs1259763196 1888 dbSNP
rs927734155 1890 dbSNP
rs1030968481 1891 dbSNP
rs1488968812 1893 dbSNP
rs576874032 1893 dbSNP
rs957009921 1893 dbSNP
rs1220038394 1894 dbSNP
rs146486076 1896 dbSNP
rs1263403382 1901 dbSNP
rs1022330815 1903 dbSNP
rs1226630897 1904 dbSNP
rs1489068947 1908 dbSNP
rs969560250 1908 dbSNP
rs893513793 1912 dbSNP
rs980880823 1915 dbSNP
rs1010982240 1918 dbSNP
rs73684656 1919 dbSNP
rs960952927 1923 dbSNP
rs1478625972 1952 dbSNP
rs1174880484 1961 dbSNP
rs1423716432 1962 dbSNP
rs141001944 1965 dbSNP
rs1168941857 1966 dbSNP
rs1461926793 1973 dbSNP
rs762991663 1977 dbSNP
rs1362633052 1978 dbSNP
rs941015831 1979 dbSNP
rs531254294 1980 dbSNP
rs1197574076 1985 dbSNP
rs920997223 1988 dbSNP
rs1007665703 1989 dbSNP
rs547571575 2002 dbSNP
rs932491465 2009 dbSNP
rs1337442080 2012 dbSNP
rs751792015 2013 dbSNP
rs1233396374 2016 dbSNP
rs1322260661 2019 dbSNP
rs544574517 2022 dbSNP
rs963444598 2025 dbSNP
rs1352646801 2026 dbSNP
rs1330053474 2031 dbSNP
rs1391310600 2034 dbSNP
rs377525947 2043 dbSNP
rs973342013 2047 dbSNP
rs116952338 2058 dbSNP
rs919176711 2059 dbSNP
rs762078668 2061 dbSNP
rs1473697439 2074 dbSNP
rs1272644604 2076 dbSNP
rs981922322 2085 dbSNP
rs1283980279 2089 dbSNP
rs1180891729 2093 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

miRNA-target interactions (Provided by authors)
ID Duplex structure Position
1 
miRNA  3' guGUGAGUACACCGGGGGUCgu 5'
            || ||||     ||||||  
Target 5' ggCA-UCAU-----CCCCAG-- 3'
 		3 - 16
Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000423902.2 | 3UTR | UUGGCAUCAUCCCCAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
321 hsa-miR-4731-5p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT081189 MIDN midnolin 2 4
MIRT113400 RAB5B RAB5B, member RAS oncogene family 2 8
MIRT153789 NCOA3 nuclear receptor coactivator 3 2 2
MIRT169837 GIGYF1 GRB10 interacting GYF protein 1 2 6
MIRT441540 CHD7 chromodomain helicase DNA binding protein 7 2 2
MIRT443470 ACPP acid phosphatase, prostate 2 2
MIRT443851 RGS6 regulator of G protein signaling 6 2 2
MIRT444416 EMC1 ER membrane protein complex subunit 1 2 2
MIRT444838 PDE6D phosphodiesterase 6D 2 2
MIRT444997 HRH1 histamine receptor H1 2 2
MIRT446371 THSD4 thrombospondin type 1 domain containing 4 2 2
MIRT449696 SLC10A3 solute carrier family 10 member 3 2 2
MIRT451068 PNMAL2 paraneoplastic Ma antigen family member 8B 2 2
MIRT451915 ILK integrin linked kinase 2 2
MIRT452990 CABP4 calcium binding protein 4 2 2
MIRT458034 MRPL12 mitochondrial ribosomal protein L12 2 2
MIRT460780 VPS37B VPS37B, ESCRT-I subunit 2 2
MIRT463916 WNT3 Wnt family member 3 2 2
MIRT465880 TMEM43 transmembrane protein 43 2 4
MIRT466317 THRA thyroid hormone receptor, alpha 2 2
MIRT468696 SEC22C SEC22 homolog C, vesicle trafficking protein 2 4
MIRT469129 RNF126 ring finger protein 126 2 2
MIRT472239 NFIC nuclear factor I C 2 2
MIRT479647 CD4 CD4 molecule 2 2
MIRT479734 CCND1 cyclin D1 2 6
MIRT479837 CCDC86 coiled-coil domain containing 86 2 2
MIRT483408 SPATA6 spermatogenesis associated 6 2 4
MIRT485972 RTBDN retbindin 2 2
MIRT486614 METTL6 methyltransferase like 6 2 2
MIRT487814 PER3 period circadian clock 3 2 2
MIRT488586 ST7L suppression of tumorigenicity 7 like 2 2
MIRT488673 WWP2 WW domain containing E3 ubiquitin protein ligase 2 2 2
MIRT490783 PSMD3 proteasome 26S subunit, non-ATPase 3 2 2
MIRT491356 PEX6 peroxisomal biogenesis factor 6 2 2
MIRT493539 IGDCC3 immunoglobulin superfamily DCC subclass member 3 2 4
MIRT493894 FAM43A family with sequence similarity 43 member A 2 4
MIRT494664 ARL8A ADP ribosylation factor like GTPase 8A 2 2
MIRT506353 NUP50 nucleoporin 50 2 6
MIRT508553 CEP72 centrosomal protein 72 2 4
MIRT508722 ZNF682 zinc finger protein 682 2 4
MIRT508811 GPR155 G protein-coupled receptor 155 2 2
MIRT509070 MED18 mediator complex subunit 18 2 2
MIRT509107 BMP8B bone morphogenetic protein 8b 2 6
MIRT509198 TTF2 transcription termination factor 2 2 2
MIRT509308 ZNF460 zinc finger protein 460 2 2
MIRT509341 ZNF708 zinc finger protein 708 2 2
MIRT509381 ASH2L ASH2 like histone lysine methyltransferase complex subunit 2 6
MIRT509722 EFCAB11 EF-hand calcium binding domain 11 2 4
MIRT510008 CRISPLD2 cysteine rich secretory protein LCCL domain containing 2 2 4
MIRT510067 C12orf49 chromosome 12 open reading frame 49 2 6
MIRT510179 BCL2L2 BCL2 like 2 2 2
MIRT511300 KIAA1551 KIAA1551 2 2
MIRT511531 HMGB1 high mobility group box 1 2 6
MIRT512018 DNAJC10 DnaJ heat shock protein family (Hsp40) member C10 2 2
MIRT514112 SERF2 small EDRK-rich factor 2 2 2
MIRT514296 FXYD5 FXYD domain containing ion transport regulator 5 2 6
MIRT514460 FANCA Fanconi anemia complementation group A 2 2
MIRT515183 CRCP CGRP receptor component 2 2
MIRT515290 C4orf3 chromosome 4 open reading frame 3 2 2
MIRT515528 QRFPR pyroglutamylated RFamide peptide receptor 2 4
MIRT515553 TMEM134 transmembrane protein 134 2 2
MIRT515619 ISY1 ISY1 splicing factor homolog 2 2
MIRT515707 ZNF321P zinc finger protein 321, pseudogene 2 2
MIRT515988 SLC30A2 solute carrier family 30 member 2 2 2
MIRT516179 POLR3A RNA polymerase III subunit A 2 4
MIRT516247 BCAS4 breast carcinoma amplified sequence 4 2 4
MIRT516505 SYTL3 synaptotagmin like 3 2 4
MIRT516586 SPHAR S-phase response (cyclin related) 2 2
MIRT516697 ODF2L outer dense fiber of sperm tails 2 like 2 2
MIRT516779 PTRF caveolae associated protein 1 2 4
MIRT516998 COX19 COX19, cytochrome c oxidase assembly factor 2 2
MIRT517094 CCDC30 coiled-coil domain containing 30 2 4
MIRT517163 SLC28A1 solute carrier family 28 member 1 2 2
MIRT517234 PRIM1 DNA primase subunit 1 2 4
MIRT517602 SAV1 salvador family WW domain containing protein 1 2 2
MIRT517631 ZNF491 zinc finger protein 491 2 2
MIRT517734 C1orf220 chromosome 1 open reading frame 220 2 2
MIRT517748 DIS3L DIS3 like exosome 3'-5' exoribonuclease 2 4
MIRT518005 RPL4 ribosomal protein L4 2 4
MIRT518184 SLC27A4 solute carrier family 27 member 4 2 2
MIRT518266 LEAP2 liver enriched antimicrobial peptide 2 2 2
MIRT518448 KIF6 kinesin family member 6 2 2
MIRT518679 KCNMB1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 2 2
MIRT518834 NEK8 NIMA related kinase 8 2 2
MIRT519142 C2orf49 chromosome 2 open reading frame 49 2 2
MIRT519250 PLA2G12A phospholipase A2 group XIIA 2 2
MIRT519369 RBM28 RNA binding motif protein 28 2 2
MIRT519410 KCNA7 potassium voltage-gated channel subfamily A member 7 2 4
MIRT519495 MAPK13 mitogen-activated protein kinase 13 2 2
MIRT520061 YIPF4 Yip1 domain family member 4 2 2
MIRT520132 WSB1 WD repeat and SOCS box containing 1 2 2
MIRT520289 UBXN2A UBX domain protein 2A 2 2
MIRT520433 TTLL12 tubulin tyrosine ligase like 12 2 2
MIRT520553 TNRC6B trinucleotide repeat containing 6B 2 2
MIRT520764 TCF23 transcription factor 23 2 2
MIRT520806 TAOK1 TAO kinase 1 2 2
MIRT520874 STX17 syntaxin 17 2 2
MIRT520986 SOCS5 suppressor of cytokine signaling 5 2 2
MIRT521077 SLC25A15 solute carrier family 25 member 15 2 2
MIRT521165 SDHAF1 succinate dehydrogenase complex assembly factor 1 2 2
MIRT521213 SBNO1 strawberry notch homolog 1 2 2
MIRT521485 RAB4A RAB4A, member RAS oncogene family 2 2
MIRT521638 PROSC pyridoxal phosphate binding protein 2 2
MIRT522151 NR2F6 nuclear receptor subfamily 2 group F member 6 2 4
MIRT522300 NKAP NFKB activating protein 2 2
MIRT522445 MOB4 MOB family member 4, phocein 2 2
MIRT522493 MFN1 mitofusin 1 2 2
MIRT522877 KHSRP KH-type splicing regulatory protein 2 2
MIRT523059 HYPK huntingtin interacting protein K 2 2
MIRT523095 HSPE1-MOB4 HSPE1-MOB4 readthrough 2 2
MIRT523577 GGA2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 2 2
MIRT523634 FOXK1 forkhead box K1 2 4
MIRT524231 DCTN6 dynactin subunit 6 2 2
MIRT524266 CYCS cytochrome c, somatic 2 2
MIRT524367 CREB1 cAMP responsive element binding protein 1 2 2
MIRT524430 CNKSR3 CNKSR family member 3 2 2
MIRT524557 CASP16 caspase 16, pseudogene 2 2
MIRT524585 CALCOCO2 calcium binding and coiled-coil domain 2 2 2
MIRT524955 AGO3 argonaute 3, RISC catalytic component 2 2
MIRT531856 MAP2K2 mitogen-activated protein kinase kinase 2 2 2
MIRT541995 MYO1C myosin IC 2 2
MIRT542247 HSPA4L heat shock protein family A (Hsp70) member 4 like 2 2
MIRT542601 YOD1 YOD1 deubiquitinase 2 2
MIRT545238 ZFAND3 zinc finger AN1-type containing 3 2 2
MIRT552183 F2RL3 F2R like thrombin or trypsin receptor 3 2 2
MIRT553520 TMEM245 transmembrane protein 245 2 2
MIRT554430 SAMD8 sterile alpha motif domain containing 8 2 2
MIRT559138 BTF3L4 basic transcription factor 3 like 4 2 4
MIRT564062 CDT1 chromatin licensing and DNA replication factor 1 2 2
MIRT564857 ZBED3 zinc finger BED-type containing 3 2 2
MIRT565382 TGOLN2 trans-golgi network protein 2 2 2
MIRT568952 RUNX3 runt related transcription factor 3 2 2
MIRT568983 CACNA1C calcium voltage-gated channel subunit alpha1 C 2 2
MIRT569255 FAM129B family with sequence similarity 129 member B 2 2
MIRT570199 RAP1GAP2 RAP1 GTPase activating protein 2 2 2
MIRT570913 PPFIA4 PTPRF interacting protein alpha 4 2 2
MIRT571084 ZNF670 zinc finger protein 670 2 2
MIRT571456 YKT6 YKT6 v-SNARE homolog 2 2
MIRT574233 DMRT2 doublesex and mab-3 related transcription factor 2 2 2
MIRT608730 MYH9 myosin heavy chain 9 2 2
MIRT610109 IL17REL interleukin 17 receptor E like 2 2
MIRT614235 WDR53 WD repeat domain 53 2 4
MIRT626199 PNRC1 proline rich nuclear receptor coactivator 1 2 4
MIRT626325 LRTOMT leucine rich transmembrane and O-methyltransferase domain containing 2 2
MIRT626381 BBS1 Bardet-Biedl syndrome 1 2 2
MIRT627164 ZNF48 zinc finger protein 48 2 2
MIRT633098 CBX5 chromobox 5 2 2
MIRT642246 PAK4 p21 (RAC1) activated kinase 4 2 2
MIRT643882 IMP4 IMP4, U3 small nucleolar ribonucleoprotein 2 2
MIRT644837 SEC14L4 SEC14 like lipid binding 4 2 2
MIRT645189 POLR3F RNA polymerase III subunit F 2 4
MIRT645781 FFAR4 free fatty acid receptor 4 2 2
MIRT647144 CYP27C1 cytochrome P450 family 27 subfamily C member 1 2 2
MIRT647273 CHST6 carbohydrate sulfotransferase 6 2 2
MIRT648743 FAM46B family with sequence similarity 46 member B 2 2
MIRT649204 KIAA1715 lunapark, ER junction formation factor 2 2
MIRT649859 WDR12 WD repeat domain 12 2 2
MIRT650814 PNPLA3 patatin like phospholipase domain containing 3 2 2
MIRT659537 CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 2 2
MIRT664212 LSM3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated 2 2
MIRT664373 CYB5A cytochrome b5 type A 2 2
MIRT667395 MOB1B MOB kinase activator 1B 2 2
MIRT669465 ATL3 atlastin GTPase 3 2 2
MIRT670556 SHISA2 shisa family member 2 2 2
MIRT673104 MFSD2A major facilitator superfamily domain containing 2A 2 2
MIRT679350 LRG1 leucine rich alpha-2-glycoprotein 1 2 2
MIRT680354 GATAD1 GATA zinc finger domain containing 1 2 4
MIRT680680 ZNF785 zinc finger protein 785 2 2
MIRT680759 WDR73 WD repeat domain 73 2 2
MIRT681392 RMND1 required for meiotic nuclear division 1 homolog 2 2
MIRT681687 ABI2 abl interactor 2 2 2
MIRT681817 N4BP2L2 NEDD4 binding protein 2 like 2 2 2
MIRT682314 RAB42 RAB42, member RAS oncogene family 2 2
MIRT683308 C19orf40 Fanconi anemia core complex associated protein 24 1 1
MIRT683374 ESR2 estrogen receptor 2 2 2
MIRT683466 CCS copper chaperone for superoxide dismutase 2 2
MIRT683481 ZNF7 zinc finger protein 7 2 2
MIRT683514 C11orf54 chromosome 11 open reading frame 54 2 2
MIRT683860 OCIAD1 OCIA domain containing 1 2 2
MIRT683926 SLC43A3 solute carrier family 43 member 3 2 2
MIRT683935 MYLK3 myosin light chain kinase 3 2 2
MIRT684068 TLR7 toll like receptor 7 2 2
MIRT684120 CEP104 centrosomal protein 104 2 2
MIRT684192 MSRB2 methionine sulfoxide reductase B2 2 2
MIRT684343 IFIT3 interferon induced protein with tetratricopeptide repeats 3 2 2
MIRT684480 GPR137B G protein-coupled receptor 137B 2 2
MIRT684565 ORAI2 ORAI calcium release-activated calcium modulator 2 2 2
MIRT684608 GTF2IRD2B GTF2I repeat domain containing 2B 2 2
MIRT684643 PDE4C phosphodiesterase 4C 2 2
MIRT684700 LRRD1 leucine rich repeats and death domain containing 1 2 2
MIRT684735 DNAJB13 DnaJ heat shock protein family (Hsp40) member B13 2 2
MIRT684911 CD28 CD28 molecule 2 2
MIRT685024 MRI1 methylthioribose-1-phosphate isomerase 1 2 2
MIRT685186 DCTN5 dynactin subunit 5 2 2
MIRT685234 F2RL1 F2R like trypsin receptor 1 2 2
MIRT685303 ASB16 ankyrin repeat and SOCS box containing 16 2 2
MIRT685345 CCL5 C-C motif chemokine ligand 5 2 2
MIRT685553 TXK TXK tyrosine kinase 2 2
MIRT685570 KCNK6 potassium two pore domain channel subfamily K member 6 2 2
MIRT685651 C11orf1 chromosome 11 open reading frame 1 2 2
MIRT685697 BHMT2 betaine--homocysteine S-methyltransferase 2 2 2
MIRT685731 C12orf65 chromosome 12 open reading frame 65 2 2
MIRT685873 RTN2 reticulon 2 2 2
MIRT685937 PTGIS prostaglandin I2 synthase 2 2
MIRT686095 TNIP3 TNFAIP3 interacting protein 3 2 2
MIRT686147 HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 2 2
MIRT686271 WWC1 WW and C2 domain containing 1 2 2
MIRT686307 VPS53 VPS53, GARP complex subunit 2 2
MIRT686349 USP15 ubiquitin specific peptidase 15 2 2
MIRT686377 UBE2V2 ubiquitin conjugating enzyme E2 V2 2 2
MIRT686431 LINC00598 long intergenic non-protein coding RNA 598 2 2
MIRT686477 TRIOBP TRIO and F-actin binding protein 2 2
MIRT686515 TRAF3IP2 TRAF3 interacting protein 2 2 2
MIRT686682 TIMM10 translocase of inner mitochondrial membrane 10 2 2
MIRT686818 SLC7A11 solute carrier family 7 member 11 2 2
MIRT686904 SGTB small glutamine rich tetratricopeptide repeat containing beta 2 2
MIRT686974 SERINC1 serine incorporator 1 2 2
MIRT687035 RNF115 ring finger protein 115 2 2
MIRT687067 RABGAP1L RAB GTPase activating protein 1 like 2 2
MIRT687240 PDHB pyruvate dehydrogenase E1 beta subunit 2 2
MIRT687494 NFATC2IP nuclear factor of activated T-cells 2 interacting protein 2 2
MIRT687591 MANEAL mannosidase endo-alpha like 2 2
MIRT687635 LRIF1 ligand dependent nuclear receptor interacting factor 1 2 2
MIRT687673 LMBR1L limb development membrane protein 1 like 2 2
MIRT687849 ISCA2 iron-sulfur cluster assembly 2 2 2
MIRT687918 HOOK3 hook microtubule tethering protein 3 2 2
MIRT687974 GTF2IRD2 GTF2I repeat domain containing 2 2 2
MIRT688105 GK5 glycerol kinase 5 (putative) 2 2
MIRT688115 GEMIN8 gem nuclear organelle associated protein 8 2 2
MIRT688148 GABPB1 GA binding protein transcription factor beta subunit 1 2 2
MIRT688263 FAM213A family with sequence similarity 213 member A 2 2
MIRT688456 DNAJB4 DnaJ heat shock protein family (Hsp40) member B4 2 2
MIRT688497 DDI2 DNA damage inducible 1 homolog 2 2 2
MIRT688558 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT688668 CPT1A carnitine palmitoyltransferase 1A 2 2
MIRT689057 AGMAT agmatinase 2 2
MIRT689075 ADO 2-aminoethanethiol dioxygenase 2 2
MIRT689108 ZBTB25 zinc finger and BTB domain containing 25 2 2
MIRT689161 ZNF665 zinc finger protein 665 2 2
MIRT689788 GTF2H3 general transcription factor IIH subunit 3 2 2
MIRT689835 HIST1H2BJ histone cluster 1 H2B family member j 2 2
MIRT690061 MBD1 methyl-CpG binding domain protein 1 2 2
MIRT690727 IRAK4 interleukin 1 receptor associated kinase 4 2 2
MIRT690974 ZNF578 zinc finger protein 578 2 2
MIRT691066 NUGGC nuclear GTPase, germinal center associated 2 2
MIRT691315 KIAA1841 KIAA1841 2 2
MIRT691485 FOXRED2 FAD dependent oxidoreductase domain containing 2 2 2
MIRT691568 CCDC125 coiled-coil domain containing 125 2 2
MIRT691601 IPP intracisternal A particle-promoted polypeptide 2 2
MIRT692059 ACOT9 acyl-CoA thioesterase 9 2 2
MIRT692099 CXorf38 chromosome X open reading frame 38 2 4
MIRT692311 RFK riboflavin kinase 2 2
MIRT692371 LY6G5B lymphocyte antigen 6 family member G5B 2 2
MIRT692432 METTL8 methyltransferase like 8 2 2
MIRT692468 APEX2 apurinic/apyrimidinic endodeoxyribonuclease 2 2 2
MIRT692532 PARD3 par-3 family cell polarity regulator 2 2
MIRT692594 GDF5OS growth differentiation factor 5 opposite strand 2 2
MIRT692776 SYNPO2L synaptopodin 2 like 2 2
MIRT692810 C1orf50 chromosome 1 open reading frame 50 2 2
MIRT692868 RBM41 RNA binding motif protein 41 2 2
MIRT693131 THEM4 thioesterase superfamily member 4 2 2
MIRT693313 TRIM58 tripartite motif containing 58 2 2
MIRT693497 MOB3A MOB kinase activator 3A 2 2
MIRT694101 ZNF446 zinc finger protein 446 2 2
MIRT694173 POLM DNA polymerase mu 2 2
MIRT694186 ZNF347 zinc finger protein 347 2 2
MIRT694444 TNFAIP8L1 TNF alpha induced protein 8 like 1 2 2
MIRT694653 C14orf119 chromosome 14 open reading frame 119 2 2
MIRT694802 STX4 syntaxin 4 2 2
MIRT694922 ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 2 2
MIRT695174 SLC25A33 solute carrier family 25 member 33 2 2
MIRT695305 PIGO phosphatidylinositol glycan anchor biosynthesis class O 2 4
MIRT695656 MAN2B2 mannosidase alpha class 2B member 2 2 2
MIRT695823 ABCG8 ATP binding cassette subfamily G member 8 2 2
MIRT695964 EIF2B2 eukaryotic translation initiation factor 2B subunit beta 2 2
MIRT696174 GNB5 G protein subunit beta 5 2 2
MIRT696433 SUGP1 SURP and G-patch domain containing 1 2 2
MIRT696610 CRIPT CXXC repeat containing interactor of PDZ3 domain 2 2
MIRT696854 UBOX5 U-box domain containing 5 2 2
MIRT696896 C14orf105 coiled-coil domain containing 198 2 2
MIRT697382 ZMAT3 zinc finger matrin-type 3 2 2
MIRT697529 ZBTB46 zinc finger and BTB domain containing 46 2 2
MIRT697973 TSPAN6 tetraspanin 6 2 2
MIRT698325 TMEM127 transmembrane protein 127 2 2
MIRT698915 SPEM1 spermatid maturation 1 2 2
MIRT699257 SLC6A4 solute carrier family 6 member 4 2 2
MIRT699311 SLC35F5 solute carrier family 35 member F5 2 4
MIRT699624 SH3BP5 SH3 domain binding protein 5 2 2
MIRT699688 SF3B3 splicing factor 3b subunit 3 2 2
MIRT700040 RPL14 ribosomal protein L14 2 2
MIRT700095 RNF19B ring finger protein 19B 2 2
MIRT700498 PTPN4 protein tyrosine phosphatase, non-receptor type 4 2 2
MIRT700747 PLAA phospholipase A2 activating protein 2 2
MIRT701103 PAPD5 poly(A) RNA polymerase D5, non-canonical 2 2
MIRT701568 MYPN myopalladin 2 2
MIRT701692 MYADM myeloid associated differentiation marker 2 2
MIRT701815 MRPL37 mitochondrial ribosomal protein L37 2 2
MIRT702435 KIAA1549 KIAA1549 2 2
MIRT702518 KCND3 potassium voltage-gated channel subfamily D member 3 2 2
MIRT702954 HIP1 huntingtin interacting protein 1 2 2
MIRT703079 GPRIN3 GPRIN family member 3 2 2
MIRT704106 DRAXIN dorsal inhibitory axon guidance protein 2 2
MIRT704138 DNAL1 dynein axonemal light chain 1 2 2
MIRT704187 LDHD lactate dehydrogenase D 2 2
MIRT704754 CDKN2AIPNL CDKN2A interacting protein N-terminal like 2 2
MIRT705075 C4orf29 abhydrolase domain containing 18 2 2
MIRT705342 ATP1B3 ATPase Na+/K+ transporting subunit beta 3 2 2
MIRT706274 SLC35F6 solute carrier family 35 member F6 2 2
MIRT706397 HAS2 hyaluronan synthase 2 2 2
MIRT706431 LIAS lipoic acid synthetase 2 2
MIRT706506 MTMR9 myotubularin related protein 9 2 2
MIRT707586 PCNXL2 pecanex homolog 2 2 2
MIRT708361 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase 2 2
MIRT708444 MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5 2 2
MIRT709915 GRIK3 glutamate ionotropic receptor kainate type subunit 3 2 2
MIRT712607 BHLHA15 basic helix-loop-helix family member a15 2 2
MIRT716540 GOLGA2 golgin A2 2 2
MIRT721623 VDR vitamin D receptor 2 2
MIRT724887 MVK mevalonate kinase 2 2
MIRT725257 PARVB parvin beta 2 2
MIRT755885 RPLP0 ribosomal protein lateral stalk subunit P0 3 1
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-mir-4731 Fluorouracil 3385 NSC19893 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-mir-4731 Gemcitabine 60750 NSC613327 approved sensitive High Pancreatic Cancer cell line (PANC-1)
hsa-mir-4731 Cisplatin 5460033 NSC119875 approved sensitive cell line (A2780)
hsa-miR-4731-5p Anthracycline 30323 NSC82151 approved resistant High Breast Cancer tissue
hsa-miR-4731-5p Fluorouracil 3385 NSC19893 approved resistant High Breast Cancer tissue
hsa-miR-4731-5p Cyclophosphamide 2907 NSC26271 approved resistant High Breast Cancer tissue
hsa-miR-4731-5p Methotrexate 126941 NSC740 approved resistant High Breast Cancer tissue
hsa-miR-4731-5p Taxol 36314 NSC125973 approved resistant High Breast Cancer tissue
hsa-miR-4731-5p Vemurafenib 42611257 NSC761431 approved resistant cell line (451Lu)
hsa-miR-4731-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (100 ng/ml)
hsa-miR-4731-5p Gemcitabine 60750 NSC613327 approved sensitive cell line (PANC-1) (1500 ng/ml)

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