>PSTK|NM_153336|3'UTR
   1 GATGAACAAGTGCTTCCTCACAACTTGAAGCTTCTAGCAGAAGAACTTAACAAGCTCAAAGCAGAGTTTTTGGAAGACCT
  81 AAAACAAGGAAACAAAAAATATCTGTGCTTTCAGCAAACCATTGACATACCAGATGTCATTTCTTTTTTTCATTATGAGA
 161 AAGATAATATTGTACAGAAGTATTTTTCAAAGCAGCATTAAAATTTCTGAACTGCCAAAAAAAAAAAAAAAAAAAAAAAA
 241 AAA

ID	Duplex structure	Position	Score	MFE
1	miRNA 3' aggUAGAGACUUGugac 5' ||:||||||| Target 5' aaaATTTCTGAACtgcc 3'	200 - 216	106.00	-11.00
2	miRNA 3' aggUAGAGA-CUUGUGac 5' :|:|:| ||| || Target 5' agaGTTTTTGGAAGACct 3'	63 - 80	98.00	-5.90
3	miRNA 3' aggUAGAGACU-UGUGac 5' | | :||| |:|| Target 5' caaACCATTGACATACca 3'	115 - 132	82.00	-5.30

Mutant ID	Mutant Position	Mutant Source
COSN31557441	2	COSMIC
COSN28704078	90	COSMIC
COSN10061331	424	COSMIC
COSN1474707	473	COSMIC
COSN20454430	713	COSMIC
COSN15513443	946	COSMIC
COSN15514041	1056	COSMIC
COSN19436464	1100	COSMIC
COSN29884888	1294	COSMIC
COSN29221779	1308	COSMIC
COSN22884311	2127	COSMIC
COSN15544242	2268	COSMIC
COSN1474709	2322	COSMIC
COSN5279635	2504	COSMIC
COSN26537973	2651	COSMIC
COSM6285204	2671	COSMIC
COSN30533246	2692	COSMIC
COSM7312227	2699	COSMIC
COSN30704569	2713	COSMIC
COSN19627341	2722	COSMIC
COSN30526981	2783	COSMIC
COSN13242644	2820	COSMIC
COSN31548825	2829	COSMIC
COSM2020892	2857	COSMIC
COSM6420752	2860	COSMIC

Mutant ID	Mutant Position	Mutant Source
rs1283135408	3	dbSNP
rs148686268	9	dbSNP
rs780106121	9	dbSNP
rs1347170756	10	dbSNP
rs550825337	10	dbSNP
rs761905063	11	dbSNP
rs906162840	12	dbSNP
rs368972767	15	dbSNP
rs1163506577	16	dbSNP
rs1454258480	21	dbSNP
rs1192290797	22	dbSNP
rs765184375	23	dbSNP
rs749558698	25	dbSNP
rs755175315	26	dbSNP
rs752533663	29	dbSNP
rs1014566277	34	dbSNP
rs199528272	35	dbSNP
rs1295008151	37	dbSNP
rs777506240	37	dbSNP
rs751049644	41	dbSNP
rs756750569	46	dbSNP
rs1197157536	48	dbSNP
rs990094573	57	dbSNP
rs1268254129	64	dbSNP
rs1211886082	69	dbSNP
rs973135831	76	dbSNP
rs531190262	77	dbSNP
rs1327081933	79	dbSNP
rs1267596483	83	dbSNP
rs2421154	90	dbSNP
rs187557870	91	dbSNP
rs2421153	94	dbSNP
rs79275915	95	dbSNP
rs570637178	105	dbSNP
rs907383808	106	dbSNP
rs938827659	110	dbSNP
rs1386077490	111	dbSNP
rs1157772367	114	dbSNP
rs748483980	115	dbSNP
rs945971864	115	dbSNP
rs192547768	125	dbSNP
rs1171355182	127	dbSNP
rs923970302	148	dbSNP
rs936702926	153	dbSNP
rs1247658672	154	dbSNP
rs1201200498	156	dbSNP
rs1209524387	162	dbSNP
rs1243118781	164	dbSNP
rs1209403276	172	dbSNP
rs1466326528	174	dbSNP
rs1265348646	175	dbSNP
rs1217412706	187	dbSNP
rs1343963136	193	dbSNP
rs1340712496	194	dbSNP
rs1198682908	199	dbSNP
rs1053876210	216	dbSNP
rs1016608112	218	dbSNP
rs556354628	221	dbSNP
rs574992316	222	dbSNP
rs76785103	227	dbSNP
rs11248355	228	dbSNP
rs572788603	229	dbSNP
rs906775964	231	dbSNP
rs1189490805	233	dbSNP
rs1185209410	240	dbSNP
rs987019332	242	dbSNP
rs1209582467	243	dbSNP
rs1018219153	255	dbSNP
rs963919407	256	dbSNP
rs1367776651	258	dbSNP
rs1212731575	264	dbSNP
rs1478107073	266	dbSNP
rs1005130922	267	dbSNP
rs1228684405	273	dbSNP
rs1363374791	274	dbSNP
rs1281908531	275	dbSNP
rs1398183111	277	dbSNP
rs1360218866	278	dbSNP
rs1315421589	283	dbSNP
rs539881857	286	dbSNP
rs898837815	306	dbSNP
rs6599640	309	dbSNP
rs1028755826	311	dbSNP
rs1181326270	317	dbSNP
rs1473197505	318	dbSNP
rs953280517	326	dbSNP
rs977553469	327	dbSNP
rs1008714674	333	dbSNP
rs1019236105	336	dbSNP
rs900214212	337	dbSNP
rs928694862	338	dbSNP
rs34144853	344	dbSNP
rs977342598	347	dbSNP
rs1327462957	356	dbSNP
rs1221020292	359	dbSNP
rs1273663537	368	dbSNP
rs1276928234	379	dbSNP
rs1315531897	382	dbSNP
rs1287347742	384	dbSNP
rs923896532	389	dbSNP
rs938893775	391	dbSNP
rs894769428	398	dbSNP
rs1408553277	405	dbSNP
rs942263686	409	dbSNP
rs1309016644	414	dbSNP
rs1037924545	415	dbSNP
rs1484045774	416	dbSNP
rs958041322	421	dbSNP
rs989941720	431	dbSNP
rs1405982005	448	dbSNP
rs995869833	457	dbSNP
rs1030107768	463	dbSNP
rs898177527	464	dbSNP
rs1166936086	472	dbSNP
rs954675501	473	dbSNP
rs1471560526	475	dbSNP
rs1251071704	483	dbSNP
rs916655745	507	dbSNP
rs577038296	516	dbSNP
rs1195746360	520	dbSNP
rs948159734	530	dbSNP
rs1421438055	537	dbSNP
rs1477524330	540	dbSNP
rs758573877	544	dbSNP
rs928144963	557	dbSNP
rs777726116	558	dbSNP
rs1464736594	561	dbSNP
rs34489297	563	dbSNP
rs1361558698	572	dbSNP
rs1437469265	578	dbSNP
rs940907079	582	dbSNP
rs1318615719	586	dbSNP
rs1411117947	597	dbSNP
rs747461321	597	dbSNP
rs898806721	598	dbSNP
rs544389280	605	dbSNP
rs1296856260	606	dbSNP
rs1420585346	606	dbSNP
rs1018520481	612	dbSNP
rs1190466317	612	dbSNP
rs1254540488	619	dbSNP
rs994502721	620	dbSNP
rs1206262019	630	dbSNP
rs1340504424	633	dbSNP
rs1269270359	636	dbSNP
rs562683658	646	dbSNP
rs572995773	647	dbSNP
rs1301363312	664	dbSNP
rs867646751	666	dbSNP
rs1301005177	668	dbSNP
rs1009099868	670	dbSNP
rs1373432824	679	dbSNP
rs1230590513	681	dbSNP
rs1018753555	684	dbSNP
rs1434403866	694	dbSNP
rs1389508987	696	dbSNP
rs967204467	697	dbSNP
rs529902626	698	dbSNP
rs1175052284	699	dbSNP
rs967377086	716	dbSNP
rs1396455672	719	dbSNP
rs1260872919	728	dbSNP
rs1448286677	733	dbSNP
rs1261840974	737	dbSNP
rs977814521	740	dbSNP
rs548453329	742	dbSNP
rs1269576182	743	dbSNP
rs1350533589	750	dbSNP
rs1431572578	760	dbSNP
rs960398177	770	dbSNP
rs1175623483	784	dbSNP
rs1366269884	786	dbSNP
rs1381198877	787	dbSNP
rs1032940282	800	dbSNP
rs916090588	807	dbSNP
rs567006910	810	dbSNP
rs1037975486	815	dbSNP
rs560219655	816	dbSNP
rs1166269263	820	dbSNP
rs527661558	821	dbSNP
rs1373361248	823	dbSNP
rs929686530	826	dbSNP
rs184851890	855	dbSNP
rs147410175	857	dbSNP
rs890916076	862	dbSNP
rs1486820246	866	dbSNP
rs1272916213	868	dbSNP
rs1204979548	870	dbSNP
rs1008392951	873	dbSNP
rs762628161	874	dbSNP
rs969491235	874	dbSNP
rs899687572	876	dbSNP
rs547680811	881	dbSNP
rs1415343134	882	dbSNP
rs1357355728	883	dbSNP
rs1021526813	885	dbSNP
rs1396744653	886	dbSNP
rs565817542	886	dbSNP
rs1169307343	890	dbSNP
rs928112411	895	dbSNP
rs112427595	896	dbSNP
rs1165087822	899	dbSNP
rs1222202425	899	dbSNP
rs960034623	904	dbSNP
rs1250296042	905	dbSNP
rs1267220815	912	dbSNP
rs1438772919	913	dbSNP
rs1487530625	913	dbSNP
rs187591260	918	dbSNP
rs192768344	921	dbSNP
rs1235291437	924	dbSNP
rs1273880256	924	dbSNP
rs930931163	929	dbSNP
rs1336820039	931	dbSNP
rs371202268	931	dbSNP
rs1177095588	932	dbSNP
rs1238000707	941	dbSNP
rs12262032	947	dbSNP
rs1330395671	952	dbSNP
rs888790051	956	dbSNP
rs1384729912	990	dbSNP
rs150386188	993	dbSNP
rs751310711	994	dbSNP
rs1040163179	1000	dbSNP
rs902988906	1003	dbSNP
rs1159111519	1005	dbSNP
rs145074422	1006	dbSNP
rs1365923821	1009	dbSNP
rs929543059	1027	dbSNP
rs184677260	1034	dbSNP
rs1400489004	1035	dbSNP
rs1215614024	1042	dbSNP
rs1463618491	1049	dbSNP
rs893049700	1056	dbSNP
rs574415921	1064	dbSNP
rs1051980375	1077	dbSNP
rs373183695	1079	dbSNP
rs1372342281	1082	dbSNP
rs1230844963	1084	dbSNP
rs1369757780	1084	dbSNP
rs1023597356	1085	dbSNP
rs1228716541	1090	dbSNP
rs943687120	1094	dbSNP
rs1314748738	1099	dbSNP
rs149092550	1102	dbSNP
rs1220884062	1103	dbSNP
rs899581096	1128	dbSNP
rs1011400379	1130	dbSNP
rs1171157659	1142	dbSNP
rs534079157	1154	dbSNP
rs1395870698	1158	dbSNP
rs982133493	1177	dbSNP
rs544943567	1186	dbSNP
rs544329346	1199	dbSNP
rs1247507011	1201	dbSNP
rs556023383	1220	dbSNP
rs999186628	1221	dbSNP
rs1286318265	1224	dbSNP
rs972204775	1229	dbSNP
rs1035584833	1232	dbSNP
rs556563292	1234	dbSNP
rs1346918830	1238	dbSNP
rs1280513780	1240	dbSNP
rs1237842381	1249	dbSNP
rs960332852	1253	dbSNP
rs920798911	1255	dbSNP
rs1473317041	1259	dbSNP
rs574557208	1261	dbSNP
rs1430882816	1268	dbSNP
rs144745223	1271	dbSNP
rs1332801080	1277	dbSNP
rs910193502	1278	dbSNP
rs1434448917	1284	dbSNP
rs1376452051	1286	dbSNP
rs1175698957	1297	dbSNP
rs560364896	1299	dbSNP
rs1428052825	1303	dbSNP
rs963449715	1308	dbSNP
rs189896707	1321	dbSNP
rs1476444278	1349	dbSNP
rs1243735814	1350	dbSNP
rs1185333674	1351	dbSNP
rs1485187950	1351	dbSNP
rs1257946352	1357	dbSNP
rs1163509196	1359	dbSNP
rs1400374774	1383	dbSNP
rs1212835929	1385	dbSNP
rs1466794994	1392	dbSNP
rs973607603	1402	dbSNP
rs1340904478	1410	dbSNP
rs1282874057	1420	dbSNP
rs774020924	1427	dbSNP
rs1436167642	1428	dbSNP
rs1328836608	1438	dbSNP
rs1356722807	1440	dbSNP
rs1315176102	1441	dbSNP
rs757203551	1441	dbSNP
rs1354106593	1444	dbSNP
rs1448424012	1445	dbSNP
rs751495002	1446	dbSNP
rs545750186	1447	dbSNP
rs934436174	1448	dbSNP
rs1278836613	1450	dbSNP
rs1189776868	1465	dbSNP
rs138601409	1466	dbSNP
rs1216924514	1469	dbSNP
rs912121976	1479	dbSNP
rs943733141	1479	dbSNP
rs767607173	1482	dbSNP
rs975043196	1485	dbSNP
rs1012812561	1488	dbSNP
rs1023317236	1491	dbSNP
rs1042753906	1494	dbSNP
rs1195030737	1497	dbSNP
rs1226898344	1507	dbSNP
rs1373058686	1511	dbSNP
rs1298900420	1519	dbSNP
rs1426460181	1522	dbSNP
rs903028804	1528	dbSNP
rs79144195	1540	dbSNP
rs1167946522	1544	dbSNP
rs1057426694	1546	dbSNP
rs895720107	1556	dbSNP
rs1012954837	1567	dbSNP
rs1003481949	1574	dbSNP
rs1177630280	1581	dbSNP
rs1418305730	1589	dbSNP
rs549855680	1596	dbSNP
rs1022969792	1597	dbSNP
rs1035024599	1598	dbSNP
rs1468561706	1602	dbSNP
rs578078801	1603	dbSNP
rs1357205284	1605	dbSNP
rs1316899641	1607	dbSNP
rs141591812	1610	dbSNP
rs1298705508	1615	dbSNP
rs1027785901	1617	dbSNP
rs868666638	1618	dbSNP
rs1342313895	1628	dbSNP
rs1441685029	1631	dbSNP
rs1398182443	1634	dbSNP
rs1327770788	1646	dbSNP
rs986368236	1647	dbSNP
rs1159524972	1648	dbSNP
rs1420677157	1649	dbSNP
rs964989837	1652	dbSNP
rs1454287279	1654	dbSNP
rs974928844	1659	dbSNP
rs1254315684	1662	dbSNP
rs1184323503	1671	dbSNP
rs1261874005	1676	dbSNP
rs920937921	1676	dbSNP
rs1221142842	1677	dbSNP
rs1235322056	1679	dbSNP
rs1310845635	1679	dbSNP
rs947025173	1680	dbSNP
rs1181277927	1682	dbSNP
rs1347573952	1682	dbSNP
rs1010083457	1683	dbSNP
rs978500424	1683	dbSNP
rs1217872328	1684	dbSNP
rs1373408036	1685	dbSNP
rs202154315	1685	dbSNP
rs200282841	1686	dbSNP
rs1434939324	1689	dbSNP
rs1020584984	1690	dbSNP
rs1190796934	1691	dbSNP
rs1241036366	1692	dbSNP
rs1478105627	1693	dbSNP
rs1262999154	1694	dbSNP
rs968664968	1694	dbSNP
rs1422677355	1695	dbSNP
rs1433811769	1696	dbSNP
rs1159056581	1697	dbSNP
rs978713942	1699	dbSNP
rs547696677	1700	dbSNP
rs1272816484	1701	dbSNP
rs1226729899	1715	dbSNP
rs1317624981	1716	dbSNP
rs1296137619	1717	dbSNP
rs1383837557	1722	dbSNP
rs1353556104	1729	dbSNP
rs934516878	1731	dbSNP
rs1331752061	1733	dbSNP
rs1438753380	1734	dbSNP
rs796616765	1735	dbSNP
rs1370562642	1736	dbSNP
rs796230603	1739	dbSNP
rs975743394	1740	dbSNP
rs1288611805	1753	dbSNP
rs924307293	1758	dbSNP
rs934364529	1772	dbSNP
rs1171979720	1774	dbSNP
rs1352077900	1775	dbSNP
rs1474510613	1776	dbSNP
rs1205051170	1782	dbSNP
rs1054224320	1784	dbSNP
rs1417825501	1786	dbSNP
rs761850477	1791	dbSNP
rs1291268389	1794	dbSNP
rs1044300121	1798	dbSNP
rs765465473	1806	dbSNP
rs566332399	1812	dbSNP
rs948549372	1813	dbSNP
rs1044261977	1818	dbSNP
rs1250708256	1827	dbSNP
rs1453425514	1829	dbSNP
rs907113428	1830	dbSNP
rs1292619470	1831	dbSNP
rs1233629435	1834	dbSNP
rs1357142401	1838	dbSNP
rs1326382689	1840	dbSNP
rs1002782064	1842	dbSNP
rs1056359884	1843	dbSNP
rs897835591	1844	dbSNP
rs886519461	1847	dbSNP
rs560430020	1874	dbSNP
rs993516444	1875	dbSNP
rs1407107855	1883	dbSNP
rs1028165338	1885	dbSNP
rs758566936	1886	dbSNP
rs1181623512	1887	dbSNP
rs576802504	1893	dbSNP
rs1211840012	1894	dbSNP
rs1252981312	1894	dbSNP
rs964818167	1899	dbSNP
rs1321706422	1903	dbSNP
rs113921892	1908	dbSNP
rs1214261885	1909	dbSNP
rs1447816874	1911	dbSNP
rs558543838	1912	dbSNP
rs1238114033	1914	dbSNP
rs1017810027	1915	dbSNP
rs1308728003	1916	dbSNP
rs1438029763	1916	dbSNP
rs10902854	1917	dbSNP
rs968379727	1918	dbSNP
rs976339377	1919	dbSNP
rs141624721	1922	dbSNP
rs955704571	1923	dbSNP
rs1359112712	1924	dbSNP
rs924388404	1924	dbSNP
rs1365712310	1931	dbSNP
rs1211036797	1936	dbSNP
rs989861761	1941	dbSNP
rs914289270	1942	dbSNP
rs574467681	1949	dbSNP
rs1198879018	1951	dbSNP
rs1282126410	1957	dbSNP
rs1044614460	1959	dbSNP
rs1351173612	1966	dbSNP
rs1287645023	1967	dbSNP
rs541971928	1969	dbSNP
rs938563549	1973	dbSNP
rs1368947281	1974	dbSNP
rs1438043931	1975	dbSNP
rs553693669	1977	dbSNP
rs1044350664	1978	dbSNP
rs1473741126	1985	dbSNP
rs920490697	1988	dbSNP
rs1161479082	1992	dbSNP
rs897799504	1993	dbSNP
rs930667101	1996	dbSNP
rs1333588771	1998	dbSNP
rs993444273	2001	dbSNP
rs571961908	2002	dbSNP
rs1047723322	2003	dbSNP
rs1049082472	2004	dbSNP
rs887854822	2006	dbSNP
rs752831399	2011	dbSNP
rs1007675490	2015	dbSNP
rs1018155500	2018	dbSNP
rs10902855	2022	dbSNP
rs1280621977	2032	dbSNP
rs560825207	2039	dbSNP
rs1333488633	2046	dbSNP
rs1270065637	2055	dbSNP
rs1218772833	2056	dbSNP
rs1343011522	2057	dbSNP
rs564079840	2058	dbSNP
rs1311412648	2067	dbSNP
rs968262336	2085	dbSNP
rs1376241184	2089	dbSNP
rs1000307424	2094	dbSNP
rs1031915947	2098	dbSNP
rs377539391	2101	dbSNP
rs1194970702	2102	dbSNP
rs1256619199	2104	dbSNP
rs1418876033	2106	dbSNP
rs1168631980	2112	dbSNP
rs1185465736	2113	dbSNP
rs1425750647	2113	dbSNP
rs1475682370	2113	dbSNP
rs531583950	2114	dbSNP
rs1185666565	2122	dbSNP
rs955863443	2124	dbSNP
rs990221383	2128	dbSNP
rs1331926824	2134	dbSNP
rs916977490	2135	dbSNP
rs969901309	2136	dbSNP
rs543481976	2137	dbSNP
rs1172917799	2139	dbSNP
rs1356512901	2143	dbSNP
rs562184324	2145	dbSNP
rs1286118282	2149	dbSNP
rs970180229	2152	dbSNP
rs1354204251	2153	dbSNP
rs1329596747	2154	dbSNP
rs1371516725	2155	dbSNP
rs75786442	2157	dbSNP
rs1461694177	2164	dbSNP
rs979880350	2165	dbSNP
rs1173426959	2168	dbSNP
rs1162704019	2186	dbSNP
rs1474723281	2194	dbSNP
rs181502968	2199	dbSNP
rs1183451778	2207	dbSNP
rs1468257882	2216	dbSNP
rs139965858	2220	dbSNP
rs1204555018	2221	dbSNP
rs1458737474	2232	dbSNP
rs1271749672	2233	dbSNP
rs1213634146	2234	dbSNP
rs1330255937	2237	dbSNP
rs930581834	2239	dbSNP
rs1292430441	2242	dbSNP
rs1341694070	2244	dbSNP
rs566147478	2258	dbSNP
rs2421150	2271	dbSNP
rs1400007365	2275	dbSNP
rs577673397	2280	dbSNP
rs1036851984	2287	dbSNP
rs918482914	2289	dbSNP
rs533616050	2295	dbSNP
rs1272999681	2306	dbSNP
rs79724122	2309	dbSNP
rs1280387615	2311	dbSNP
rs1449000069	2312	dbSNP
rs1368885674	2315	dbSNP
rs1325372193	2323	dbSNP
rs1049523719	2330	dbSNP
rs1226207279	2336	dbSNP
rs1350443527	2341	dbSNP
rs907886246	2342	dbSNP
rs1398763969	2345	dbSNP
rs887791547	2346	dbSNP
rs943409100	2350	dbSNP
rs944680227	2351	dbSNP
rs1346849775	2365	dbSNP
rs1250586005	2380	dbSNP
rs1192506578	2381	dbSNP
rs1469286418	2385	dbSNP
rs1040485165	2394	dbSNP
rs1208488279	2405	dbSNP
rs1039137606	2409	dbSNP
rs900582531	2411	dbSNP
rs932186500	2412	dbSNP
rs1256639472	2417	dbSNP
rs901956840	2425	dbSNP
rs1346069690	2430	dbSNP
rs1488596039	2441	dbSNP
rs997667455	2442	dbSNP
rs1441802334	2452	dbSNP
rs770129483	2453	dbSNP
rs558607522	2459	dbSNP
rs112836890	2460	dbSNP
rs118138349	2469	dbSNP
rs1031642642	2474	dbSNP
rs1021672068	2476	dbSNP
rs969770925	2484	dbSNP
rs891476743	2486	dbSNP
rs555898613	2488	dbSNP
rs980232853	2489	dbSNP
rs568106823	2490	dbSNP
rs11248356	2491	dbSNP
rs1024088232	2501	dbSNP
rs1185300178	2509	dbSNP
rs1361687720	2510	dbSNP
rs959803960	2511	dbSNP
rs1422082657	2517	dbSNP
rs147500963	2518	dbSNP
rs9423300	2519	dbSNP
rs1381223288	2525	dbSNP
rs1279908149	2528	dbSNP
rs761461088	2535	dbSNP
rs1332471436	2537	dbSNP
rs1314032477	2540	dbSNP
rs1231757311	2545	dbSNP
rs532014452	2548	dbSNP
rs1354213106	2556	dbSNP
rs1218665932	2565	dbSNP
rs983405947	2576	dbSNP
rs1258961458	2577	dbSNP
rs796189465	2578	dbSNP
rs750545564	2579	dbSNP
rs943371129	2580	dbSNP
rs539282961	2582	dbSNP
rs1466053079	2600	dbSNP
rs976048925	2603	dbSNP
rs1378846621	2605	dbSNP
rs1269652557	2607	dbSNP
rs773354870	2613	dbSNP
rs547464954	2620	dbSNP
rs1425035624	2621	dbSNP
rs901925786	2622	dbSNP
rs112872935	2623	dbSNP
rs1234778529	2629	dbSNP
rs570351292	2631	dbSNP
rs1348147342	2634	dbSNP
rs1484395473	2637	dbSNP
rs746434470	2644	dbSNP
rs1318345431	2649	dbSNP
rs1284412583	2653	dbSNP
rs1467633997	2660	dbSNP
rs184546557	2666	dbSNP
rs1255471225	2668	dbSNP
rs1306797250	2671	dbSNP
rs1469276821	2694	dbSNP
rs1181594839	2705	dbSNP
rs1362403216	2707	dbSNP
rs534382744	2708	dbSNP
rs1220164333	2709	dbSNP
rs1043757241	2716	dbSNP
rs1053246610	2717	dbSNP
rs904043044	2721	dbSNP
rs11190	2722	dbSNP
rs1459955092	2725	dbSNP
rs189303862	2726	dbSNP
rs749599490	2728	dbSNP
rs768889324	2731	dbSNP
rs756167884	2732	dbSNP
rs1333752062	2741	dbSNP
rs1444005838	2744	dbSNP
rs774516810	2746	dbSNP
rs1333648127	2748	dbSNP
rs896715525	2750	dbSNP
rs1274476208	2755	dbSNP
rs1336178573	2758	dbSNP
rs1195721551	2759	dbSNP
rs761913754	2760	dbSNP
rs1439924789	2763	dbSNP
rs1021893222	2772	dbSNP
rs1257105825	2773	dbSNP
rs1013954021	2774	dbSNP
rs906134929	2775	dbSNP
rs1474325868	2777	dbSNP
rs1177850561	2780	dbSNP
rs1167237408	2789	dbSNP
rs541164934	2792	dbSNP
rs1258563011	2793	dbSNP
rs773154779	2796	dbSNP
rs749473877	2798	dbSNP
rs1394161137	2800	dbSNP
rs1411459686	2804	dbSNP
rs1308368876	2806	dbSNP
rs1245304570	2808	dbSNP
rs1354473485	2810	dbSNP
rs1412519137	2813	dbSNP
rs1035355810	2817	dbSNP
rs959772909	2821	dbSNP
rs1340547243	2822	dbSNP
rs567875621	2827	dbSNP
rs1332866097	2828	dbSNP
rs972463682	2830	dbSNP
rs1342027457	2831	dbSNP
rs905495019	2832	dbSNP
rs1196775144	2833	dbSNP
rs1001300456	2841	dbSNP
rs1280019761	2848	dbSNP
rs1181372802	2853	dbSNP
rs559930006	2859	dbSNP
rs759581703	2860	dbSNP
rs1258394684	2862	dbSNP
rs1427998345	2863	dbSNP
rs1191039252	2864	dbSNP
rs1435026624	2869	dbSNP
rs765196659	2879	dbSNP
rs951937231	2882	dbSNP
rs1314501116	2885	dbSNP
rs983677115	2885	dbSNP
rs1014878544	2886	dbSNP

- Cell host & microbe, 2011

Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.