miRTarBase - #MIRT441868


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pre-miRNA Information
pre-miRNA hsa-mir-4480   
Genomic Coordinates chr10: 12578753 - 12578823
Description Homo sapiens miR-4480 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4480
Sequence 44| AGCCAAGUGGAAGUUACUUUA |64
Evidence Experimental
Experiments Illumina
Editing Events in miRNAs
Modification Type Position on miR Chromosome DNA Strand Genomic Position (hg38) List of PMIDs Variant details
A-to-I 1 10 + 12578796 23291724, 27587585 MiREDiBase
A-to-I 12 10 + 12578807 23291724, 27587585 MiREDiBase
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs929437808 7 dbSNP
rs1454494557 9 dbSNP
rs1345041659 17 dbSNP
rs561601367 21 dbSNP
Putative Targets

Gene Information
Gene Symbol RNASEL   
Synonyms PRCA1, RNS4
Description ribonuclease L
Transcript NM_021133   
Expression
Putative miRNA Targets on RNASEL
3'UTR of RNASEL
(miRNA target sites are highlighted)		 
>RNASEL|NM_021133|3'UTR
   1 TGGACTGATTTGCTGGAGTTCAGGGAACTACTTATTAGCTGTAGAGTCCTTGGCAAATCACAACATTCTGGGCCTTTTAA
  81 CTCACCAGGTTGCTTGTGAGGGATGAGTTGCATAGCTGATATGTCAGTCCCTGGCATCGTGTATTCCATATGTCTATAAC
 161 AAAAGCAATATATACCCAGACTACACTAGTCCATAAGCTTTACCCACTAACTGGGAGGACATTCTGCTAAGATTCCTTTT
 241 GTCAATTGCACCAAAAGAATGAGTGCCTTGACCCCTAATGCTGCATATGTTACAATTCTCTCACTTAATTTTCCCAATGA
 321 TCTTGCAAAACAGGGATTATCATCCCCATTTAAGAACTGAGGAACCTGAGACTCAGAGAGTGTGAGCTACTGGCCCAAGA
 401 TTATTCAATTTATACCTAGCACTTTATAAATTTATGTGGTGTTATTGGTACCTCTCATTTGGGCACCTTAAAACTTAACT
 481 ATCCTTCCAGGGCTCTTCCAGATGAGGCCCAAAACATATATAGGGGTTCCAGGAATCTCATTCATTCATTCAGTATTTAT
 561 TGAGCATCTAGTATAAGTCTGGGCACTGGATGCATGAATTCCACTCCTTCCAGAACCAACTGCATTGGTTTTCCATGACC
 641 TTAAGGCAGTAGTTCTCAACTGGGGGGCAATTTTGCACTGAAGAGAGCATTTGGCAGAGTCTGAAGAAGTTTTTGGTGTC
 721 ACAGCTTTGTGGGGAGCATGCTATGGCATTTAGTGGGTAAAGACCAGGGATGCTGCCAAACCTGCCTTGCACAGGACAGC
 801 CCCTGCAACAAAGAATTATCCAGACAAAAATATCAATGGTGCTGAGGTTGAGAAAACCTGACTTAAGGGGCTGGGATGCT
 881 TTTGAACTAGCTTAAGGCCCAGGACTGTGGAGTGTGTGGACCACCCCACAGAGGAGGGACTCAGATTTATTTACTCTTGC
 961 TGGATCTGTAGTGATGGAGTTCCTTCTGGTGTCAGCCCCACAGGAGGCTCCCAGGCCTCCCTCACTTCCCATACCCAGTC
1041 TAGGAGCTCCTTCTGGCTCCCAAGCACCCAGAGCTTTCCTCCGCCTTTTAGTTTTGGTTCCTCCACTGGAATGTAGGCTC
1121 CTCACGGGCGATGGCTGTCTTTTCTTGACTTTGTATCTTCACTGCCAAGCAAAAAGTCTGCCAAGTGGGAATGTTTAATA
1201 AATATTCATTGAATAATGAATGAACCATCTTCGTACATGAATAATAATACTGTCTTACGTTTTTCTGGTGCTTTATAATG
1281 TATACATTACATCTGAGTATTTTATTTTATTTAATTTTCAAAACAATCCTTTAAGGTCAACATTGTTATCCTTATTTTGC
1361 TGATGAGGAAACTAAGGTTAGAAACATTTTGATTTCCTCTAGGACGTATAGCTAGGAAGTGTTACTATCTTGATTTGAAC
1441 AAATTTTCTGGTGCTAAGTCTGATGTTCTTTCCATGAATCATTGTGGTGGTTGAGATGGAGCTTTGTAATGGGAATAAAA
1521 CAGTACCTTAGGTTCTTTCTGAAAAGGAGGTATCTAGCAATGGATAAATAGATACCACTGAATGAAATTAAATGTTGATT
1601 AGGAACAAATTTAAGGCTTAAAAAATACTTTATGAGCAGCAAGATTGCTTTAACTTTTAAAATGAAGCTTTGGTTCTCTG
1681 ATTTGTAATGAGCACCTGGATATGTCAATTAAAATGCCCATTTGTGAAGCTTACTCAATAAAACTTTAAATTGTCTTAAA
1761 AAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' auUUCAUUGAAGGUGAACCGa 5'
            ||| :|    ||:||||| 
Target 5' tgAAGAGA---GCATTTGGCa 3'
 679 - 696 132.00 -9.80
2 
miRNA  3' auuUCAUUGAAGGUGAACCga 5'
             :||| || :||:||||  
Target 5' attGGTACCTCTCATTTGGgc 3'
 444 - 464 130.00 -13.00
3 
miRNA  3' auuuCAUUGAAGGUGAACCGa 5'
              |||:  ||  |||||| 
Target 5' agctGTAGAGTC--CTTGGCa 3'
 37 - 55 124.00 -11.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN31958546 10 COSMIC
COSN32064394 25 COSMIC
COSN30193755 43 COSMIC
COSN31540493 43 COSMIC
COSN31502713 96 COSMIC
COSN15618912 106 COSMIC
COSN31500561 112 COSMIC
COSN30180354 118 COSMIC
COSN31601585 138 COSMIC
COSN30187075 185 COSMIC
COSN31610399 226 COSMIC
COSN1416494 256 COSMIC
COSN5359112 289 COSMIC
COSN26382677 1147 COSMIC
COSN32063022 1325 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs1021430722 4 dbSNP
rs1159770321 10 dbSNP
rs750995820 11 dbSNP
rs369850875 12 dbSNP
rs376670884 14 dbSNP
rs762455655 20 dbSNP
rs373310094 24 dbSNP
rs1446340421 25 dbSNP
rs761184370 30 dbSNP
rs773837286 31 dbSNP
rs763393286 34 dbSNP
rs1284504720 39 dbSNP
rs1386835412 40 dbSNP
rs548177431 46 dbSNP
rs191464754 47 dbSNP
rs774234600 48 dbSNP
rs572299031 54 dbSNP
rs149140894 56 dbSNP
rs186980443 63 dbSNP
rs1341837380 72 dbSNP
rs898669025 86 dbSNP
rs1230437177 101 dbSNP
rs1264472030 102 dbSNP
rs1323714227 103 dbSNP
rs1045244482 107 dbSNP
rs975254702 115 dbSNP
rs948215108 118 dbSNP
rs181055950 119 dbSNP
rs145147185 131 dbSNP
rs992184243 138 dbSNP
rs149982407 143 dbSNP
rs1420171500 148 dbSNP
rs1431424768 157 dbSNP
rs771588396 165 dbSNP
rs923905505 166 dbSNP
rs1379621977 168 dbSNP
rs770047219 173 dbSNP
rs1430079521 176 dbSNP
rs188496502 178 dbSNP
rs1168825471 181 dbSNP
rs572573821 183 dbSNP
rs1462792086 192 dbSNP
rs1237891260 203 dbSNP
rs1293379911 208 dbSNP
rs975274635 210 dbSNP
rs963855707 217 dbSNP
rs1407297869 226 dbSNP
rs1345615685 232 dbSNP
rs1217530093 237 dbSNP
rs1292958839 239 dbSNP
rs1308959735 244 dbSNP
rs1019394652 245 dbSNP
rs1485500718 246 dbSNP
rs1008365129 249 dbSNP
rs1255418637 259 dbSNP
rs1224674611 260 dbSNP
rs560541364 262 dbSNP
rs1477524559 279 dbSNP
rs746089346 285 dbSNP
rs1025691402 289 dbSNP
rs1488879302 290 dbSNP
rs995178057 295 dbSNP
rs1164434928 302 dbSNP
rs138930837 307 dbSNP
rs1285587441 313 dbSNP
rs898783539 317 dbSNP
rs1045277099 322 dbSNP
rs1360491479 330 dbSNP
rs1358876698 332 dbSNP
rs1285228480 341 dbSNP
rs1267955991 344 dbSNP
rs1002363816 346 dbSNP
rs1214802680 349 dbSNP
rs948247592 353 dbSNP
rs1311699900 366 dbSNP
rs1353196561 366 dbSNP
rs1247962753 375 dbSNP
rs1025159451 380 dbSNP
rs1487962557 381 dbSNP
rs1299426555 389 dbSNP
rs1400115142 398 dbSNP
rs879051959 410 dbSNP
rs542262251 415 dbSNP
rs1344486165 416 dbSNP
rs1486292258 421 dbSNP
rs1316106647 426 dbSNP
rs1411953145 428 dbSNP
rs574922498 432 dbSNP
rs1164688062 434 dbSNP
rs1048378392 438 dbSNP
rs1414237033 448 dbSNP
rs995488896 452 dbSNP
rs556502818 454 dbSNP
rs1346488242 472 dbSNP
rs1039996038 475 dbSNP
rs538205338 481 dbSNP
rs1301877795 482 dbSNP
rs1474964338 483 dbSNP
rs943985289 490 dbSNP
rs912343277 492 dbSNP
rs577457925 505 dbSNP
rs935375597 517 dbSNP
rs1352825285 519 dbSNP
rs568747445 523 dbSNP
rs1415992321 526 dbSNP
rs1195871519 532 dbSNP
rs747961438 540 dbSNP
rs914365131 553 dbSNP
rs765939667 555 dbSNP
rs756833119 565 dbSNP
rs924047759 573 dbSNP
rs1453899058 581 dbSNP
rs1044150106 586 dbSNP
rs12135247 590 dbSNP
rs1237958943 594 dbSNP
rs1438343116 595 dbSNP
rs534357725 601 dbSNP
rs926993207 607 dbSNP
rs1387928803 608 dbSNP
rs1400754337 610 dbSNP
rs1174829216 612 dbSNP
rs1403427302 615 dbSNP
rs1454263152 619 dbSNP
rs1337076994 622 dbSNP
rs975307019 626 dbSNP
rs963887102 627 dbSNP
rs912367080 632 dbSNP
rs1165205650 635 dbSNP
rs986567724 638 dbSNP
rs566253706 650 dbSNP
rs951242154 651 dbSNP
rs1218705327 655 dbSNP
rs1261352495 656 dbSNP
rs1025555692 662 dbSNP
rs1004376220 665 dbSNP
rs1436410962 667 dbSNP
rs1218917695 668 dbSNP
rs1233963818 670 dbSNP
rs1197998138 675 dbSNP
rs1025381934 679 dbSNP
rs1470730678 700 dbSNP
rs1176675089 710 dbSNP
rs1360623556 711 dbSNP
rs547915883 713 dbSNP
rs1438449676 715 dbSNP
rs1027055312 717 dbSNP
rs1330711518 721 dbSNP
rs1324924357 722 dbSNP
rs1435680021 729 dbSNP
rs535920248 739 dbSNP
rs995560805 741 dbSNP
rs111705002 742 dbSNP
rs1448118912 746 dbSNP
rs550540269 756 dbSNP
rs1173051847 770 dbSNP
rs778482438 771 dbSNP
rs1418882250 777 dbSNP
rs1023859795 779 dbSNP
rs1274169359 781 dbSNP
rs1451475862 783 dbSNP
rs1012424244 784 dbSNP
rs1220947592 786 dbSNP
rs1271739370 789 dbSNP
rs1481112247 801 dbSNP
rs1247836619 802 dbSNP
rs891081056 803 dbSNP
rs1372127390 804 dbSNP
rs1193346795 806 dbSNP
rs1467399479 810 dbSNP
rs896662608 813 dbSNP
rs1198868104 834 dbSNP
rs1396986656 835 dbSNP
rs945888878 843 dbSNP
rs1404646104 846 dbSNP
rs569162286 847 dbSNP
rs1301194440 850 dbSNP
rs1367417635 852 dbSNP
rs1405628444 856 dbSNP
rs1297724785 857 dbSNP
rs1048254 861 dbSNP
rs1229897601 862 dbSNP
rs1048255 871 dbSNP
rs1048256 873 dbSNP
rs937091976 874 dbSNP
rs1356124318 878 dbSNP
rs1368150315 879 dbSNP
rs1294577325 881 dbSNP
rs571470120 891 dbSNP
rs546497562 892 dbSNP
rs1378826507 898 dbSNP
rs981165109 901 dbSNP
rs1194906169 905 dbSNP
rs1462639743 908 dbSNP
rs971384434 920 dbSNP
rs528259941 921 dbSNP
rs902626851 925 dbSNP
rs35307890 928 dbSNP
rs147898031 934 dbSNP
rs542372790 936 dbSNP
rs918198407 949 dbSNP
rs1168373656 956 dbSNP
rs946720188 962 dbSNP
rs982899458 970 dbSNP
rs921901215 978 dbSNP
rs951518707 1000 dbSNP
rs758915729 1009 dbSNP
rs1395823336 1014 dbSNP
rs942552864 1023 dbSNP
rs1319189404 1024 dbSNP
rs912476382 1028 dbSNP
rs1453189447 1031 dbSNP
rs987069899 1035 dbSNP
rs1317623786 1043 dbSNP
rs1179658818 1044 dbSNP
rs951231252 1049 dbSNP
rs184143344 1059 dbSNP
rs918354801 1082 dbSNP
rs374020414 1083 dbSNP
rs537454820 1085 dbSNP
rs1261989757 1100 dbSNP
rs1460642933 1101 dbSNP
rs962364944 1103 dbSNP
rs753041429 1105 dbSNP
rs892952558 1111 dbSNP
rs1158326623 1123 dbSNP
rs1011866374 1125 dbSNP
rs960979582 1126 dbSNP
rs1455404593 1127 dbSNP
rs1054293144 1128 dbSNP
rs115044380 1129 dbSNP
rs1000125889 1130 dbSNP
rs866352482 1137 dbSNP
rs1279067857 1153 dbSNP
rs1339057596 1155 dbSNP
rs1045792065 1156 dbSNP
rs1446572803 1158 dbSNP
rs1305452999 1160 dbSNP
rs902658732 1167 dbSNP
rs1355789876 1171 dbSNP
rs1240547598 1184 dbSNP
rs566890251 1188 dbSNP
rs1309633013 1191 dbSNP
rs11072 1196 dbSNP
rs550586255 1199 dbSNP
rs755887632 1205 dbSNP
rs1010963274 1208 dbSNP
rs900507786 1210 dbSNP
rs750113514 1211 dbSNP
rs1450512474 1215 dbSNP
rs1039091609 1224 dbSNP
rs1461589866 1225 dbSNP
rs944680685 1227 dbSNP
rs1176470392 1230 dbSNP
rs982971221 1232 dbSNP
rs891064102 1233 dbSNP
rs1051003713 1236 dbSNP
rs577471392 1238 dbSNP
rs1428717956 1241 dbSNP
rs920057178 1248 dbSNP
rs1178823596 1249 dbSNP
rs974248908 1250 dbSNP
rs559178331 1256 dbSNP
rs540507819 1257 dbSNP
rs573129140 1258 dbSNP
rs1382733391 1259 dbSNP
rs1399191992 1259 dbSNP
rs964475954 1289 dbSNP
rs554739806 1290 dbSNP
rs1288388265 1304 dbSNP
rs1344350439 1307 dbSNP
rs1018384755 1313 dbSNP
rs1221209553 1313 dbSNP
rs1160224681 1319 dbSNP
rs918396597 1325 dbSNP
rs1249404923 1326 dbSNP
rs1406287656 1330 dbSNP
rs1481550769 1333 dbSNP
rs1196329950 1345 dbSNP
rs973799710 1349 dbSNP
rs642917 1352 dbSNP
rs568891620 1375 dbSNP
rs1020316424 1379 dbSNP
rs1010118672 1399 dbSNP
rs529117669 1402 dbSNP
rs990475265 1405 dbSNP
rs533360257 1406 dbSNP
rs1032842118 1408 dbSNP
rs1303057011 1409 dbSNP
rs1035700604 1421 dbSNP
rs1402533813 1424 dbSNP
rs1001398265 1427 dbSNP
rs905594522 1440 dbSNP
rs978341783 1442 dbSNP
rs967289949 1443 dbSNP
rs1213657840 1457 dbSNP
rs1293114837 1462 dbSNP
rs1309014899 1472 dbSNP
rs1286683373 1473 dbSNP
rs1022424056 1474 dbSNP
rs949855693 1478 dbSNP
rs1011074690 1480 dbSNP
rs1489856045 1484 dbSNP
rs1314880303 1485 dbSNP
rs1314688762 1486 dbSNP
rs900620589 1489 dbSNP
rs1017686411 1490 dbSNP
rs570710721 1492 dbSNP
rs371977496 1497 dbSNP
rs180755960 1504 dbSNP
rs1230228335 1507 dbSNP
rs571464686 1510 dbSNP
rs1485643667 1520 dbSNP
rs1185024394 1521 dbSNP
rs1356342263 1522 dbSNP
rs1429454920 1529 dbSNP
rs1047391078 1532 dbSNP
rs1413034352 1534 dbSNP
rs1383862147 1535 dbSNP
rs1051467342 1542 dbSNP
rs929875064 1556 dbSNP
rs761442458 1559 dbSNP
rs1429474590 1564 dbSNP
rs551063021 1575 dbSNP
rs1363719453 1590 dbSNP
rs1038202186 1592 dbSNP
rs941186559 1603 dbSNP
rs11541161 1606 dbSNP
rs1343787357 1616 dbSNP
rs916354512 1625 dbSNP
rs990506594 1637 dbSNP
rs1167363303 1638 dbSNP
rs751782960 1640 dbSNP
rs763990797 1644 dbSNP
rs1213788018 1647 dbSNP
rs1262713736 1648 dbSNP
rs1432337241 1650 dbSNP
rs1185100105 1662 dbSNP
rs374450462 1666 dbSNP
rs1486321799 1667 dbSNP
rs1183297343 1673 dbSNP
rs1048260 1676 dbSNP
rs1446918093 1685 dbSNP
rs528376259 1690 dbSNP
rs986881498 1697 dbSNP
rs641265 1701 dbSNP
rs769567212 1708 dbSNP
rs989674979 1711 dbSNP
rs988845898 1716 dbSNP
rs1457446924 1718 dbSNP
rs1335794736 1738 dbSNP
rs1380340333 1747 dbSNP
rs964853575 1749 dbSNP
rs1454423412 1753 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000367559.3 | 3UTR | UUGGCAAAUCACAACAU
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
117 hsa-miR-4480 Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT056040 MLLT10 MLLT10, histone lysine methyltransferase DOT1L cofactor 2 2
MIRT091259 FXR1 FMR1 autosomal homolog 1 2 4
MIRT117347 MAPRE2 microtubule associated protein RP/EB family member 2 2 2
MIRT234960 ZNF439 zinc finger protein 439 2 4
MIRT441356 ZNF75A zinc finger protein 75a 2 2
MIRT441426 STXBP2 syntaxin binding protein 2 2 2
MIRT441455 ZNF488 zinc finger protein 488 2 4
MIRT441524 ZBTB10 zinc finger and BTB domain containing 10 2 2
MIRT441576 EXOC5 exocyst complex component 5 2 2
MIRT441597 ABCB5 ATP binding cassette subfamily B member 5 2 6
MIRT441610 ATP13A4 ATPase 13A4 2 2
MIRT441698 CIT citron rho-interacting serine/threonine kinase 2 2
MIRT441714 FGF9 fibroblast growth factor 9 2 2
MIRT441784 MAPK8 mitogen-activated protein kinase 8 2 4
MIRT441795 EXOSC2 exosome component 2 2 2
MIRT441868 RNASEL ribonuclease L 2 2
MIRT441900 SLC9A8 solute carrier family 9 member A8 2 6
MIRT441919 FAM217B family with sequence similarity 217 member B 2 2
MIRT441928 C1orf109 chromosome 1 open reading frame 109 2 2
MIRT441938 RIMKLB ribosomal modification protein rimK like family member B 2 2
MIRT442157 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT442172 AZF1 azoospermia factor 1 2 2
MIRT442208 IRS1 insulin receptor substrate 1 2 2
MIRT442237 DDX19A DEAD-box helicase 19A 2 2
MIRT442366 ZC3HAV1L zinc finger CCCH-type containing, antiviral 1 like 2 2
MIRT442572 SDC1 syndecan 1 2 2
MIRT442604 ZNF391 zinc finger protein 391 2 2
MIRT442609 MRC1 mannose receptor C-type 1 2 2
MIRT442647 POP4 POP4 homolog, ribonuclease P/MRP subunit 2 2
MIRT442658 OIP5 Opa interacting protein 5 2 6
MIRT442686 COX15 COX15, cytochrome c oxidase assembly homolog 2 2
MIRT442773 JAG1 jagged 1 2 2
MIRT442785 CHD8 chromodomain helicase DNA binding protein 8 2 2
MIRT442895 PLCB3 phospholipase C beta 3 2 2
MIRT442941 C17orf105 chromosome 17 open reading frame 105 2 2
MIRT442959 SGCD sarcoglycan delta 2 2
MIRT442998 EDAR ectodysplasin A receptor 2 2
MIRT443017 C21orf91 chromosome 21 open reading frame 91 2 2
MIRT443064 CASP5 caspase 5 2 2
MIRT443069 ABLIM1 actin binding LIM protein 1 2 2
MIRT443208 VPS36 vacuolar protein sorting 36 homolog 2 2
MIRT443237 ANKRD26 ankyrin repeat domain 26 2 2
MIRT443253 A1CF APOBEC1 complementation factor 2 2
MIRT443329 JUN Jun proto-oncogene, AP-1 transcription factor subunit 2 2
MIRT443333 NRAS NRAS proto-oncogene, GTPase 2 2
MIRT443349 STX7 syntaxin 7 2 2
MIRT443452 CLIC5 chloride intracellular channel 5 2 2
MIRT443547 GPR35 G protein-coupled receptor 35 2 2
MIRT443616 AVPR1A arginine vasopressin receptor 1A 2 2
MIRT443626 CPSF2 cleavage and polyadenylation specific factor 2 2 2
MIRT443730 ALPK3 alpha kinase 3 2 2
MIRT443786 ST13 ST13, Hsp70 interacting protein 2 2
MIRT443852 RGS6 regulator of G protein signaling 6 2 2
MIRT445483 KLF5 Kruppel like factor 5 2 2
MIRT471105 PHLDA2 pleckstrin homology like domain family A member 2 2 2
MIRT472329 NETO2 neuropilin and tolloid like 2 2 4
MIRT472391 NDRG3 NDRG family member 3 2 2
MIRT473522 MAX MYC associated factor X 2 2
MIRT473874 MAFK MAF bZIP transcription factor K 2 6
MIRT476021 GTF2A1 general transcription factor IIA subunit 1 2 2
MIRT478320 DDN dendrin 2 2
MIRT492049 TNFSF9 TNF superfamily member 9 2 2
MIRT494851 ANKRD24 ankyrin repeat domain 24 2 2
MIRT494991 TSSC1 EARP complex and GARP complex interacting protein 1 2 2
MIRT495034 RASSF2 Ras association domain family member 2 2 2
MIRT495111 NOL10 nucleolar protein 10 2 2
MIRT495113 TRADD TNFRSF1A associated via death domain 2 2
MIRT495131 METTL24 methyltransferase like 24 2 2
MIRT495147 STAC2 SH3 and cysteine rich domain 2 2 2
MIRT495297 NUP54 nucleoporin 54 2 2
MIRT495341 RTN2 reticulon 2 2 2
MIRT495347 ATP5S ATP synthase, H+ transporting, mitochondrial Fo complex subunit s (factor B) 2 2
MIRT496682 DUSP18 dual specificity phosphatase 18 2 2
MIRT496743 TGFBR1 transforming growth factor beta receptor 1 2 2
MIRT496841 KCNIP2 potassium voltage-gated channel interacting protein 2 2 2
MIRT496852 GPAM glycerol-3-phosphate acyltransferase, mitochondrial 2 2
MIRT496889 FOXP1 forkhead box P1 2 2
MIRT496922 CLMN calmin 2 2
MIRT496990 TMEM231 transmembrane protein 231 2 2
MIRT497002 SNAP25 synaptosome associated protein 25 2 2
MIRT497058 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT500529 YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta 2 6
MIRT506048 PPP6C protein phosphatase 6 catalytic subunit 2 4
MIRT512163 CD164 CD164 molecule 2 6
MIRT527051 RDH13 retinol dehydrogenase 13 2 2
MIRT532282 TNFSF14 TNF superfamily member 14 2 2
MIRT534083 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT534605 RNASEH1 ribonuclease H1 2 4
MIRT539509 ACSS3 acyl-CoA synthetase short chain family member 3 2 2
MIRT543069 ARID4B AT-rich interaction domain 4B 2 2
MIRT544233 CCBL2 kynurenine aminotransferase 3 2 2
MIRT544686 ZNF224 zinc finger protein 224 2 4
MIRT546269 TMEM30A transmembrane protein 30A 2 4
MIRT559069 C19orf47 chromosome 19 open reading frame 47 2 2
MIRT562768 RMI2 RecQ mediated genome instability 2 2 2
MIRT563974 HCFC1 host cell factor C1 2 2
MIRT564086 NSA2 NSA2, ribosome biogenesis homolog 2 2
MIRT564525 PDXP pyridoxal phosphatase 2 2
MIRT564613 ZNF703 zinc finger protein 703 2 2
MIRT566252 PTBP1 polypyrimidine tract binding protein 1 2 2
MIRT614420 ZNF440 zinc finger protein 440 2 2
MIRT618789 MTHFR methylenetetrahydrofolate reductase 2 2
MIRT619160 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT641778 ZDHHC7 zinc finger DHHC-type containing 7 2 4
MIRT653680 SLC25A36 solute carrier family 25 member 36 2 2
MIRT657861 GJD2 gap junction protein delta 2 2 2
MIRT660879 ADCYAP1R1 ADCYAP receptor type I 2 2
MIRT668781 DAAM1 dishevelled associated activator of morphogenesis 1 2 4
MIRT688559 DCAF16 DDB1 and CUL4 associated factor 16 2 2
MIRT695393 WDR41 WD repeat domain 41 2 2
MIRT698680 TCEA1 transcription elongation factor A1 2 2
MIRT700974 PDIA6 protein disulfide isomerase family A member 6 2 2
MIRT705055 C5orf15 chromosome 5 open reading frame 15 2 2
MIRT705864 AFF1 AF4/FMR2 family member 1 2 2
MIRT710586 CDCA4 cell division cycle associated 4 2 2
MIRT713904 IGF2R insulin like growth factor 2 receptor 2 2
MIRT717133 SKI SKI proto-oncogene 2 2
miRNA-Drug Associations
miRNA Small Melocule FDA CID Detection Method Condition PMID Year Expression Pattern of miRNA
miR-4 Dexamethasone approved 5743 Microarray primary rat thymocytes 20847043 2010 up-regulated
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved sensitive cell line (CIS)
hsa-miR-4480 Cisplatin 5460033 NSC119875 approved resistant cell line (A549)

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