>NDUFV3|NM_001001503|3'UTR
   1 GGGCCCTCGGTGTGAAGATGAACCTTCCACCGTCTTCACTGCATCCTGGAGTGCAAAAATAAAATCCACTCAAGAGTCAC
  81 AAGGCCCGCTGTGCATAATCGGTTTCACTTTTACCTTTTTTTTTTTTTTTTTTTTTTTGAGACAGGGTCTCACTCTGTCA
 161 CCCAGGCTGGAGTGCAGTGGCACATTCTCGGCTCACTGCAACTTCCGCCTCCTGGGTTCAAGTGATTCTCCCACCTCAGC
 241 CTCCCAAGTAGGTGGGATTACAGGTACTCACCACCAGGTCCAGCTAACTTTTGTATTTTTAGTAGAGACAGGGTTTCACC
 321 ATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAGATGGTCTGCCCACCTCCGCCTCCCAAAGTGCTGGGATTACAGGC
 401 GTGAGCCACTGCGCCCGGCCACTTTCACACTTTTTACAGTGAGTGGTGAATTAGCAACAGTAACACTGATTATCCAACAT
 481 ATATTTTGGAATATCTACTATGTGCAAGGAATTTTTCTTAAACTCTAAGGTTATGAATCACTGGGCAAATCCATATAATT
 561 AGAGAATTTTAAGTGCTTTAGAGCGGTGTGATTCTACTGTGCTCAGCCTAGTCAATTTCGCATTAAACTGATTATCAGCT
 641 GAAAAAAAAAAAAAAAAAAAAAA

ID	Duplex structure	Position	Score	MFE
1	miRNA 3' cacGUGUC----CUC--UUAC----ACCG--GAAAc 5' :|||| ||| | || ||| |||| Target 5' gatTACAGGCGTGAGCCACTGCGCCCGGCCACTTTc 3'	391 - 426	107.00	-13.03
2	miRNA 3' cacGUGUCC--UCUUA---CACCG-GAAAc 5' | |||| :||:| ||||| | || Target 5' tcaCCCAGGCTGGAGTGCAGTGGCACATTc 3'	158 - 187	103.00	-13.97
3	miRNA 3' cacgUGUCC-----UCUUAC-ACCGGaaac 5' ||||| | ||| ||||| Target 5' agagACAGGGTTTCACCATGTTGGCCaggc 3'	304 - 333	100.00	-14.50

Mutant ID	Mutant Position	Mutant Source
COSN19772811	4	COSMIC
COSN22390630	6	COSMIC
COSN30505525	9	COSMIC
COSN26986253	10	COSMIC
COSN30160280	28	COSMIC
COSN30489361	88	COSMIC
COSN20080024	108	COSMIC
COSN19651089	114	COSMIC
COSN28541240	140	COSMIC
COSN14629398	191	COSMIC
COSN28447535	414	COSMIC
COSN31961922	464	COSMIC
COSN9159774	737	COSMIC
COSN32015002	745	COSMIC
COSN5769674	799	COSMIC
COSN5987773	1077	COSMIC
COSN24494105	1189	COSMIC
COSN22705400	1421	COSMIC
COSN16437053	1424	COSMIC
COSN17591827	1490	COSMIC
COSN27202595	1680	COSMIC
COSN22846418	1815	COSMIC
COSN28341341	2231	COSMIC
COSN16736111	2509	COSMIC
COSN7146988	3275	COSMIC
COSN25845151	3380	COSMIC
COSN28225009	3454	COSMIC
COSN27028512	3541	COSMIC
COSN27028946	3565	COSMIC
COSN14815890	3765	COSMIC
COSN14815729	3777	COSMIC
COSN7146989	3789	COSMIC

Mutant ID	Mutant Position	Mutant Source
rs764260937	4	dbSNP
rs751542071	5	dbSNP
rs757564033	6	dbSNP
rs374485925	9	dbSNP
rs528276891	10	dbSNP
rs368453726	11	dbSNP
rs1408089987	14	dbSNP
rs749834159	15	dbSNP
rs377173440	17	dbSNP
rs772794397	19	dbSNP
rs746451381	21	dbSNP
rs369641038	22	dbSNP
rs776323071	29	dbSNP
rs199831702	32	dbSNP
rs765116445	33	dbSNP
rs565072099	36	dbSNP
rs1324739905	39	dbSNP
rs1203541431	40	dbSNP
rs775104083	41	dbSNP
rs936081305	42	dbSNP
rs1197019092	43	dbSNP
rs762967982	52	dbSNP
rs1425652303	59	dbSNP
rs1165691321	67	dbSNP
rs1455757695	72	dbSNP
rs532419281	72	dbSNP
rs913025814	73	dbSNP
rs1166015195	74	dbSNP
rs959314751	75	dbSNP
rs984188824	76	dbSNP
rs551023638	83	dbSNP
rs909572252	86	dbSNP
rs1401561103	88	dbSNP
rs115452287	89	dbSNP
rs1213528187	98	dbSNP
rs1329925606	102	dbSNP
rs1273263949	107	dbSNP
rs1234514287	108	dbSNP
rs1332232240	109	dbSNP
rs879133291	114	dbSNP
rs1055450491	116	dbSNP
rs1317459901	116	dbSNP
rs1348392505	116	dbSNP
rs1382773112	116	dbSNP
rs1421371436	116	dbSNP
rs1433526965	116	dbSNP
rs1463035024	116	dbSNP
rs36011300	116	dbSNP
rs753742104	116	dbSNP
rs771692768	116	dbSNP
rs898282198	116	dbSNP
rs972521912	116	dbSNP
rs1397300123	118	dbSNP
rs1312859731	119	dbSNP
rs1186668409	120	dbSNP
rs1320721839	128	dbSNP
rs1253479915	138	dbSNP
rs995252846	138	dbSNP
rs1231136024	139	dbSNP
rs951529090	140	dbSNP
rs1318345957	142	dbSNP
rs1264546075	146	dbSNP
rs1197873028	147	dbSNP
rs1409864301	148	dbSNP
rs1275562577	149	dbSNP
rs1226576000	152	dbSNP
rs1365130674	156	dbSNP
rs1484216254	160	dbSNP
rs1443250177	164	dbSNP
rs62220801	168	dbSNP
rs922738362	176	dbSNP
rs1462683912	177	dbSNP
rs1356428521	178	dbSNP
rs1166493738	181	dbSNP
rs1255624411	188	dbSNP
rs540490831	190	dbSNP
rs548711169	191	dbSNP
rs566912704	204	dbSNP
rs950833278	206	dbSNP
rs1049956250	207	dbSNP
rs1424714512	208	dbSNP
rs1177215000	210	dbSNP
rs1481420706	211	dbSNP
rs1005154188	217	dbSNP
rs1168901548	225	dbSNP
rs1019638745	229	dbSNP
rs534177844	249	dbSNP
rs966305782	252	dbSNP
rs1310584704	257	dbSNP
rs1361377112	265	dbSNP
rs1300682471	271	dbSNP
rs936263138	278	dbSNP
rs1375821518	283	dbSNP
rs1467048015	289	dbSNP
rs113442181	293	dbSNP
rs957452171	303	dbSNP
rs1464490911	304	dbSNP
rs891809534	311	dbSNP
rs990162057	312	dbSNP
rs779379201	322	dbSNP
rs1159226405	324	dbSNP
rs913082962	331	dbSNP
rs1249218909	341	dbSNP
rs1010715638	342	dbSNP
rs571095422	347	dbSNP
rs945848436	353	dbSNP
rs1202474298	356	dbSNP
rs981281408	357	dbSNP
rs928572163	361	dbSNP
rs1045821054	363	dbSNP
rs141469864	370	dbSNP
rs556404150	374	dbSNP
rs775422248	375	dbSNP
rs959262496	389	dbSNP
rs544061259	390	dbSNP
rs1016982113	401	dbSNP
rs1314510390	404	dbSNP
rs1313866503	409	dbSNP
rs961089275	411	dbSNP
rs1255414777	413	dbSNP
rs578037609	414	dbSNP
rs574899209	417	dbSNP
rs1046823582	418	dbSNP
rs1158045947	427	dbSNP
rs796204388	430	dbSNP
rs886838379	431	dbSNP
rs1005488947	440	dbSNP
rs922338496	444	dbSNP
rs1441006385	449	dbSNP
rs562718812	451	dbSNP
rs542167284	460	dbSNP
rs529727120	467	dbSNP
rs955147851	468	dbSNP
rs554290355	469	dbSNP
rs866432384	476	dbSNP
rs183163607	490	dbSNP
rs936223480	491	dbSNP
rs1335760418	494	dbSNP
rs11702815	495	dbSNP
rs913186964	500	dbSNP
rs565068679	501	dbSNP
rs1437182124	502	dbSNP
rs1432355419	505	dbSNP
rs1319319231	506	dbSNP
rs1046179155	512	dbSNP
rs1461463964	518	dbSNP
rs1396258443	520	dbSNP
rs1299612214	521	dbSNP
rs907292770	524	dbSNP
rs937448205	526	dbSNP
rs1194264734	534	dbSNP
rs370585808	547	dbSNP
rs1054869689	556	dbSNP
rs1451897647	556	dbSNP
rs967476179	558	dbSNP
rs981717257	561	dbSNP
rs1468942478	562	dbSNP
rs1268188797	568	dbSNP
rs1369466517	574	dbSNP
rs532180551	585	dbSNP
rs1005857143	586	dbSNP
rs919609893	587	dbSNP
rs1219676383	589	dbSNP
rs1300532791	590	dbSNP
rs930989868	590	dbSNP
rs1332293627	591	dbSNP
rs1345763161	591	dbSNP
rs1321239360	593	dbSNP
rs1218843299	594	dbSNP
rs1404403386	595	dbSNP
rs1286896150	596	dbSNP
rs1168881035	600	dbSNP
rs1046750183	620	dbSNP
rs776098305	621	dbSNP
rs897098513	636	dbSNP
rs552926360	637	dbSNP
rs1454810013	645	dbSNP
rs1248524832	650	dbSNP
rs1213999360	654	dbSNP
rs1248752277	664	dbSNP
rs1478570454	673	dbSNP
rs879237774	680	dbSNP
rs943798586	686	dbSNP
rs1393842277	694	dbSNP
rs993846086	695	dbSNP
rs375199470	699	dbSNP
rs544534484	713	dbSNP
rs955096047	715	dbSNP
rs562732357	717	dbSNP
rs1339762429	718	dbSNP
rs1018431792	721	dbSNP
rs527282651	722	dbSNP
rs1460821562	726	dbSNP
rs1234911719	730	dbSNP
rs957565589	740	dbSNP
rs990776983	744	dbSNP
rs764629423	745	dbSNP
rs946328927	746	dbSNP
rs1336019160	748	dbSNP
rs981387147	760	dbSNP
rs1412120091	769	dbSNP
rs1380448063	773	dbSNP
rs928666491	774	dbSNP
rs937397211	781	dbSNP
rs1055824407	784	dbSNP
rs1399685485	789	dbSNP
rs894942036	800	dbSNP
rs1427796574	801	dbSNP
rs1170916418	802	dbSNP
rs1020235661	810	dbSNP
rs941211044	812	dbSNP
rs1038650250	813	dbSNP
rs750005595	815	dbSNP
rs1184582407	819	dbSNP
rs551805000	820	dbSNP
rs1436970366	822	dbSNP
rs370641853	830	dbSNP
rs554330991	830	dbSNP
rs1368669584	848	dbSNP
rs1242301924	855	dbSNP
rs1310076391	856	dbSNP
rs1426864760	857	dbSNP
rs1029304688	866	dbSNP
rs1218176923	874	dbSNP
rs1350739486	878	dbSNP
rs1353084670	888	dbSNP
rs1226187106	905	dbSNP
rs890814839	906	dbSNP
rs991301927	910	dbSNP
rs1449147235	913	dbSNP
rs548601577	916	dbSNP
rs952598501	919	dbSNP
rs1018046557	935	dbSNP
rs1169787714	935	dbSNP
rs1414023218	939	dbSNP
rs957385903	940	dbSNP
rs766801777	944	dbSNP
rs566895338	945	dbSNP
rs1011741055	958	dbSNP
rs908160864	964	dbSNP
rs752071442	965	dbSNP
rs1020894159	970	dbSNP
rs1473640537	971	dbSNP
rs967641268	972	dbSNP
rs1209320814	973	dbSNP
rs1447144037	981	dbSNP
rs981670585	984	dbSNP
rs1206219523	988	dbSNP
rs1328071078	992	dbSNP
rs1040772858	994	dbSNP
rs147472441	1004	dbSNP
rs928615579	1005	dbSNP
rs1415467105	1010	dbSNP
rs62220802	1017	dbSNP
rs1163930640	1018	dbSNP
rs532872350	1033	dbSNP
rs1388233664	1055	dbSNP
rs571038454	1056	dbSNP
rs991499050	1058	dbSNP
rs1448817204	1062	dbSNP
rs1181004695	1071	dbSNP
rs909295937	1072	dbSNP
rs1186155113	1074	dbSNP
rs942133718	1076	dbSNP
rs542125942	1077	dbSNP
rs1323949253	1079	dbSNP
rs371725042	1087	dbSNP
rs1288171981	1091	dbSNP
rs918430066	1097	dbSNP
rs1300406859	1098	dbSNP
rs538006688	1102	dbSNP
rs1364530376	1105	dbSNP
rs556440048	1105	dbSNP
rs777549738	1106	dbSNP
rs1294412870	1107	dbSNP
rs1438888405	1108	dbSNP
rs568411621	1109	dbSNP
rs1006556634	1121	dbSNP
rs13046098	1123	dbSNP
rs1166613299	1140	dbSNP
rs56880972	1142	dbSNP
rs1039425194	1150	dbSNP
rs1267433212	1151	dbSNP
rs892869680	1161	dbSNP
rs1487308159	1169	dbSNP
rs1035801718	1176	dbSNP
rs1222268886	1177	dbSNP
rs1343294467	1180	dbSNP
rs1232972747	1188	dbSNP
rs111447303	1204	dbSNP
rs1341995409	1212	dbSNP
rs1302091935	1217	dbSNP
rs1388545087	1227	dbSNP
rs554126849	1231	dbSNP
rs1012788483	1235	dbSNP
rs57782052	1236	dbSNP
rs752835110	1237	dbSNP
rs967970077	1246	dbSNP
rs1238132555	1258	dbSNP
rs1026815714	1262	dbSNP
rs1429031613	1264	dbSNP
rs61059766	1266	dbSNP
rs550858739	1267	dbSNP
rs61620974	1268	dbSNP
rs1179018475	1272	dbSNP
rs1430921269	1274	dbSNP
rs376361059	1275	dbSNP
rs982660127	1276	dbSNP
rs113618384	1277	dbSNP
rs1483624492	1290	dbSNP
rs958981314	1292	dbSNP
rs757226168	1294	dbSNP
rs921053662	1295	dbSNP
rs1186789038	1296	dbSNP
rs1415322295	1297	dbSNP
rs1257062287	1298	dbSNP
rs1467013333	1298	dbSNP
rs1235558812	1300	dbSNP
rs1171254550	1301	dbSNP
rs1050593826	1302	dbSNP
rs1310492023	1302	dbSNP
rs1352488388	1302	dbSNP
rs540382630	1302	dbSNP
rs569453501	1302	dbSNP
rs1286239605	1318	dbSNP
rs1395649415	1322	dbSNP
rs1402858592	1325	dbSNP
rs1304491609	1327	dbSNP
rs991430487	1331	dbSNP
rs909232841	1332	dbSNP
rs1358067452	1337	dbSNP
rs963464765	1338	dbSNP
rs972576103	1339	dbSNP
rs914703789	1356	dbSNP
rs558336762	1358	dbSNP
rs1336238182	1364	dbSNP
rs947647750	1365	dbSNP
rs1418827375	1367	dbSNP
rs1257540722	1368	dbSNP
rs918386484	1372	dbSNP
rs1202686066	1373	dbSNP
rs145334695	1377	dbSNP
rs1050946138	1380	dbSNP
rs1262594644	1382	dbSNP
rs1209372977	1384	dbSNP
rs544375556	1390	dbSNP
rs1331511967	1404	dbSNP
rs1286638522	1409	dbSNP
rs1414333362	1427	dbSNP
rs1436497687	1431	dbSNP
rs912478227	1444	dbSNP
rs1291687108	1456	dbSNP
rs942619831	1457	dbSNP
rs1342724848	1461	dbSNP
rs1219598230	1463	dbSNP
rs1378282076	1471	dbSNP
rs1039360941	1474	dbSNP
rs1458324258	1477	dbSNP
rs903414711	1478	dbSNP
rs892808598	1480	dbSNP
rs1011302864	1488	dbSNP
rs1041861491	1489	dbSNP
rs1369402481	1490	dbSNP
rs1189965957	1491	dbSNP
rs1422595280	1497	dbSNP
rs1202777216	1508	dbSNP
rs1280044999	1510	dbSNP
rs1189330065	1511	dbSNP
rs1002903963	1512	dbSNP
rs562821234	1515	dbSNP
rs147228192	1516	dbSNP
rs139616738	1519	dbSNP
rs1057439405	1521	dbSNP
rs1301978292	1525	dbSNP
rs375636984	1526	dbSNP
rs1012964638	1527	dbSNP
rs894717672	1528	dbSNP
rs1013134009	1529	dbSNP
rs1016241892	1531	dbSNP
rs1317278332	1533	dbSNP
rs1474345076	1542	dbSNP
rs963710272	1548	dbSNP
rs972138283	1549	dbSNP
rs750708882	1550	dbSNP
rs527649465	1552	dbSNP
rs1402937136	1553	dbSNP
rs369736047	1554	dbSNP
rs371902996	1557	dbSNP
rs780083181	1559	dbSNP
rs888249609	1564	dbSNP
rs552648410	1565	dbSNP
rs187797316	1566	dbSNP
rs768295940	1568	dbSNP
rs192676210	1587	dbSNP
rs1041417317	1588	dbSNP
rs1275331570	1589	dbSNP
rs1230512422	1591	dbSNP
rs1360458910	1591	dbSNP
rs902939008	1592	dbSNP
rs938462535	1595	dbSNP
rs1057198941	1596	dbSNP
rs1332493112	1597	dbSNP
rs531830159	1602	dbSNP
rs1347921746	1603	dbSNP
rs1209492620	1608	dbSNP
rs894664021	1609	dbSNP
rs1013128549	1614	dbSNP
rs1308946591	1621	dbSNP
rs1277638248	1622	dbSNP
rs1016934989	1625	dbSNP
rs1489061613	1626	dbSNP
rs1205428142	1629	dbSNP
rs899446456	1630	dbSNP
rs993900514	1633	dbSNP
rs1026335284	1636	dbSNP
rs1004558323	1640	dbSNP
rs954766024	1641	dbSNP
rs987569615	1644	dbSNP
rs965662649	1653	dbSNP
rs1453773090	1655	dbSNP
rs1019437110	1663	dbSNP
rs1171831180	1663	dbSNP
rs541206164	1664	dbSNP
rs963877165	1667	dbSNP
rs975323310	1668	dbSNP
rs914467435	1671	dbSNP
rs1420467397	1673	dbSNP
rs1288525272	1676	dbSNP
rs568448703	1678	dbSNP
rs535725469	1679	dbSNP
rs1404432406	1694	dbSNP
rs112859038	1696	dbSNP
rs924293667	1700	dbSNP
rs9984872	1701	dbSNP
rs1184116095	1702	dbSNP
rs566479352	1705	dbSNP
rs894613028	1706	dbSNP
rs948890756	1715	dbSNP
rs1232279934	1716	dbSNP
rs1210709367	1717	dbSNP
rs947580570	1722	dbSNP
rs1275913351	1723	dbSNP
rs1202431709	1725	dbSNP
rs1329476786	1728	dbSNP
rs1037910367	1729	dbSNP
rs977979273	1730	dbSNP
rs770931117	1732	dbSNP
rs149731770	1734	dbSNP
rs1279553324	1739	dbSNP
rs1449398538	1744	dbSNP
rs938929043	1746	dbSNP
rs1057132637	1747	dbSNP
rs1469318785	1748	dbSNP
rs558623170	1759	dbSNP
rs1355241225	1776	dbSNP
rs1406986427	1790	dbSNP
rs1182174299	1792	dbSNP
rs184428784	1793	dbSNP
rs761357970	1794	dbSNP
rs1047734733	1800	dbSNP
rs1249576923	1806	dbSNP
rs1464940918	1806	dbSNP
rs1206437899	1809	dbSNP
rs1315887983	1810	dbSNP
rs1048483637	1811	dbSNP
rs1229197267	1816	dbSNP
rs1359112491	1824	dbSNP
rs890480909	1828	dbSNP
rs1452067743	1832	dbSNP
rs774263337	1837	dbSNP
rs1322881841	1841	dbSNP
rs1428906007	1842	dbSNP
rs769554335	1844	dbSNP
rs772854314	1846	dbSNP
rs538081858	1848	dbSNP
rs1165260069	1851	dbSNP
rs964859144	1853	dbSNP
rs1383363852	1855	dbSNP
rs997082245	1856	dbSNP
rs1162842027	1869	dbSNP
rs1449621261	1870	dbSNP
rs145567169	1872	dbSNP
rs12627221	1873	dbSNP
rs542158706	1874	dbSNP
rs1485352130	1880	dbSNP
rs560145051	1880	dbSNP
rs765893228	1882	dbSNP
rs1222822410	1883	dbSNP
rs1253453367	1887	dbSNP
rs367995673	1888	dbSNP
rs924239824	1889	dbSNP
rs1245878509	1899	dbSNP
rs1343427012	1900	dbSNP
rs772169303	1907	dbSNP
rs1419770701	1915	dbSNP
rs1212842280	1917	dbSNP
rs372553986	1929	dbSNP
rs915657357	1930	dbSNP
rs1438419980	1932	dbSNP
rs1363486283	1947	dbSNP
rs1302234901	1948	dbSNP
rs752018064	1950	dbSNP
rs559027788	1951	dbSNP
rs1394298712	1953	dbSNP
rs1425488103	1958	dbSNP
rs920788705	1961	dbSNP
rs760980207	1964	dbSNP
rs1481661929	1972	dbSNP
rs966853539	1980	dbSNP
rs1222153194	1988	dbSNP
rs929526605	1989	dbSNP
rs977656487	1993	dbSNP
rs1202583740	1994	dbSNP
rs1306982074	2004	dbSNP
rs1378420528	2004	dbSNP
rs1221163139	2014	dbSNP
rs764491384	2017	dbSNP
rs1048013037	2018	dbSNP
rs754273494	2020	dbSNP
rs890429055	2030	dbSNP
rs1305729586	2034	dbSNP
rs762189945	2039	dbSNP
rs1410158458	2049	dbSNP
rs1372372493	2057	dbSNP
rs1314749843	2059	dbSNP
rs938952887	2066	dbSNP
rs1461095284	2068	dbSNP
rs1359231472	2075	dbSNP
rs1273508448	2078	dbSNP
rs1177520302	2080	dbSNP
rs993456735	2081	dbSNP
rs1333905312	2083	dbSNP
rs545872083	2084	dbSNP
rs1211689255	2086	dbSNP
rs187619126	2090	dbSNP
rs900567204	2092	dbSNP
rs868004669	2093	dbSNP
rs148866475	2094	dbSNP
rs1253359488	2100	dbSNP
rs1021854044	2103	dbSNP
rs1248584446	2110	dbSNP
rs1480556824	2112	dbSNP
rs549988761	2120	dbSNP
rs1425781684	2121	dbSNP
rs62220803	2130	dbSNP
rs561965624	2136	dbSNP
rs968583565	2137	dbSNP
rs1262711842	2138	dbSNP
rs1228827706	2154	dbSNP
rs192819366	2155	dbSNP
rs1048415917	2156	dbSNP
rs888567025	2158	dbSNP
rs940099352	2159	dbSNP
rs900969706	2165	dbSNP
rs371524142	2169	dbSNP
rs1031540895	2172	dbSNP
rs959985474	2178	dbSNP
rs1404966823	2188	dbSNP
rs879552833	2192	dbSNP
rs1049609336	2205	dbSNP
rs767755321	2206	dbSNP
rs1157307987	2209	dbSNP
rs915604943	2214	dbSNP
rs1010561497	2216	dbSNP
rs970185307	2217	dbSNP
rs1185538889	2218	dbSNP
rs202217905	2221	dbSNP
rs966488318	2221	dbSNP
rs999646383	2226	dbSNP
rs973197625	2227	dbSNP
rs916196872	2230	dbSNP
rs970292763	2230	dbSNP
rs992976205	2230	dbSNP
rs34033960	2231	dbSNP
rs373000134	2232	dbSNP
rs940127966	2234	dbSNP
rs1047959668	2241	dbSNP
rs1354541726	2244	dbSNP
rs1287514160	2252	dbSNP
rs1231193724	2254	dbSNP
rs1279915047	2255	dbSNP
rs756288238	2255	dbSNP
rs751014020	2256	dbSNP
rs1166002331	2258	dbSNP
rs1442925680	2262	dbSNP
rs1384689907	2267	dbSNP
rs1189233028	2273	dbSNP
rs1448978110	2286	dbSNP
rs1307995263	2287	dbSNP
rs912147352	2299	dbSNP
rs533832020	2300	dbSNP
rs922480197	2304	dbSNP
rs1039040191	2312	dbSNP
rs1293949775	2313	dbSNP
rs1243693187	2316	dbSNP
rs900517998	2338	dbSNP
rs1297727458	2355	dbSNP
rs1228914972	2362	dbSNP
rs1324359455	2368	dbSNP
rs1317164991	2374	dbSNP
rs1382070020	2377	dbSNP
rs946751675	2383	dbSNP
rs1049542034	2388	dbSNP
rs1043824118	2398	dbSNP
rs1423307822	2400	dbSNP
rs1365451431	2406	dbSNP
rs1169350656	2411	dbSNP
rs1484288038	2415	dbSNP
rs201674271	2416	dbSNP
rs1257033749	2418	dbSNP
rs1268072461	2418	dbSNP
rs1167350526	2419	dbSNP
rs1197067199	2419	dbSNP
rs1197083805	2419	dbSNP
rs1233524966	2419	dbSNP
rs1269297236	2419	dbSNP
rs1270801213	2419	dbSNP
rs1275222075	2419	dbSNP
rs1330130318	2419	dbSNP
rs1336862040	2419	dbSNP
rs1345490067	2419	dbSNP
rs1346938037	2419	dbSNP
rs1394429254	2419	dbSNP
rs1411795392	2419	dbSNP
rs1431672011	2419	dbSNP
rs1466768021	2419	dbSNP
rs1479973465	2419	dbSNP
rs548395832	2419	dbSNP
rs746517390	2419	dbSNP
rs750274425	2419	dbSNP
rs758625209	2419	dbSNP
rs776009416	2419	dbSNP
rs1474376244	2420	dbSNP
rs1196279493	2421	dbSNP
rs1420750271	2425	dbSNP
rs1183894650	2427	dbSNP
rs1435937607	2431	dbSNP
rs1271694334	2436	dbSNP
rs66493713	2444	dbSNP
rs1428372054	2445	dbSNP
rs1325281522	2446	dbSNP
rs1168968679	2447	dbSNP
rs889738386	2450	dbSNP
rs1479905766	2451	dbSNP
rs1193419671	2452	dbSNP
rs1313001144	2453	dbSNP
rs902630211	2455	dbSNP
rs1280437911	2457	dbSNP
rs1334459987	2458	dbSNP
rs1374454759	2462	dbSNP
rs1453437247	2464	dbSNP
rs1408632025	2467	dbSNP
rs998640783	2468	dbSNP
rs1031488512	2471	dbSNP
rs551878823	2472	dbSNP
rs1408444916	2473	dbSNP
rs1014136789	2476	dbSNP
rs1023032448	2477	dbSNP
rs1232192881	2478	dbSNP
rs1293383734	2484	dbSNP
rs79511125	2485	dbSNP
rs1235082119	2488	dbSNP
rs867861044	2493	dbSNP
rs1202646358	2495	dbSNP
rs1035203963	2499	dbSNP
rs960476108	2502	dbSNP
rs1484810074	2506	dbSNP
rs1027400292	2507	dbSNP
rs1014467058	2509	dbSNP
rs1242999219	2510	dbSNP
rs1485758782	2515	dbSNP
rs950487679	2516	dbSNP
rs1385076967	2517	dbSNP
rs1334700694	2529	dbSNP
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rs1023138386	2536	dbSNP
rs1320080934	2542	dbSNP
rs540582311	2546	dbSNP
rs4920009	2547	dbSNP
rs1164127098	2548	dbSNP
rs1455123488	2555	dbSNP
rs1173704604	2556	dbSNP
rs1446297969	2560	dbSNP
rs1382866751	2568	dbSNP
rs1394024219	2570	dbSNP
rs1432411281	2574	dbSNP
rs944912362	2582	dbSNP
rs974993877	2583	dbSNP
rs1429724171	2587	dbSNP
rs921894071	2588	dbSNP
rs1284263248	2592	dbSNP
rs4920010	2594	dbSNP
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rs1428462217	2601	dbSNP
rs1373075830	2605	dbSNP
rs1344391225	2609	dbSNP
rs1303470822	2618	dbSNP
rs1044153845	2626	dbSNP
rs902576813	2628	dbSNP
rs935444721	2635	dbSNP
rs1052853504	2636	dbSNP
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rs1162416864	2642	dbSNP
rs1441628767	2646	dbSNP
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rs1132437	2649	dbSNP
rs1262941463	2652	dbSNP
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rs1430020722	2676	dbSNP
rs994511987	2692	dbSNP
rs1213040369	2694	dbSNP
rs1027759239	2695	dbSNP
rs950435694	2696	dbSNP
rs1214064771	2697	dbSNP
rs1406507878	2699	dbSNP
rs1343613094	2702	dbSNP
rs371251560	2703	dbSNP
rs757984814	2709	dbSNP
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rs983213166	2714	dbSNP
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rs1248880106	2717	dbSNP
rs1409035538	2721	dbSNP
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rs1200653603	2724	dbSNP
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rs1469302787	2736	dbSNP
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rs1251774436	2742	dbSNP
rs1481212757	2745	dbSNP
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rs1202475900	2749	dbSNP
rs1452060071	2775	dbSNP
rs1159833416	2776	dbSNP
rs1408232254	2782	dbSNP
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rs1453603967	2786	dbSNP
rs922205417	2789	dbSNP
rs1396415368	2792	dbSNP
rs1263961700	2804	dbSNP
rs144051177	2808	dbSNP
rs946980326	2809	dbSNP
rs979442833	2817	dbSNP
rs1391912041	2826	dbSNP
rs188804583	2828	dbSNP
rs1295979680	2829	dbSNP
rs1011965907	2830	dbSNP
rs1178126942	2832	dbSNP
rs935392574	2846	dbSNP
rs780843677	2857	dbSNP
rs1427656328	2867	dbSNP
rs559814924	2871	dbSNP
rs1372860312	2873	dbSNP
rs1222350447	2876	dbSNP
rs1056478700	2879	dbSNP
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rs1244042464	2890	dbSNP
rs7282488	2892	dbSNP
rs146446182	2903	dbSNP
rs1271869443	2908	dbSNP
rs1255219167	2911	dbSNP
rs973183662	2913	dbSNP
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rs1304758199	2922	dbSNP
rs1222767819	2929	dbSNP
rs955463023	2933	dbSNP
rs772801027	2937	dbSNP
rs1048695353	2939	dbSNP
rs1450041793	2940	dbSNP
rs561807030	2942	dbSNP
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rs1004600183	2946	dbSNP
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rs545375902	2948	dbSNP
rs113833320	2949	dbSNP
rs1443047222	2952	dbSNP
rs1175132576	2953	dbSNP
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rs1258961597	2959	dbSNP
rs996339751	2961	dbSNP
rs111715705	2963	dbSNP
rs1360004608	2968	dbSNP
rs1316573632	2980	dbSNP
rs946573323	2983	dbSNP
rs1339553374	2984	dbSNP
rs979273348	2986	dbSNP
rs1461795167	2989	dbSNP
rs533444633	2994	dbSNP
rs1387597274	3000	dbSNP
rs773904265	3008	dbSNP
rs1419652497	3009	dbSNP
rs1366694925	3013	dbSNP
rs1165598126	3014	dbSNP
rs1442834862	3026	dbSNP
rs749147907	3027	dbSNP
rs1194163355	3030	dbSNP
rs968297085	3033	dbSNP
rs1259424768	3040	dbSNP
rs1192617260	3045	dbSNP
rs896122142	3047	dbSNP
rs980108418	3049	dbSNP
rs1293825304	3050	dbSNP
rs1219687503	3055	dbSNP
rs552180319	3055	dbSNP
rs570487381	3057	dbSNP
rs1355027237	3071	dbSNP
rs144594474	3076	dbSNP
rs563752337	3077	dbSNP
rs148177128	3080	dbSNP
rs1440222802	3081	dbSNP
rs1399750504	3084	dbSNP
rs918000261	3087	dbSNP
rs948159935	3090	dbSNP
rs768139776	3091	dbSNP
rs1295397075	3095	dbSNP
rs1346752317	3097	dbSNP
rs927132930	3104	dbSNP
rs1305477217	3125	dbSNP
rs1356464204	3129	dbSNP
rs930554068	3140	dbSNP
rs1005753086	3151	dbSNP
rs1017099628	3154	dbSNP
rs897401949	3166	dbSNP
rs1371520465	3171	dbSNP
rs1169757820	3173	dbSNP
rs994396388	3175	dbSNP
rs1049456956	3176	dbSNP
rs1030089361	3177	dbSNP
rs1450901975	3180	dbSNP
rs535679497	3180	dbSNP
rs1291840452	3181	dbSNP
rs1342006942	3182	dbSNP
rs955349571	3183	dbSNP
rs1337088376	3193	dbSNP
rs886390479	3200	dbSNP
rs985406222	3215	dbSNP
rs1004547710	3216	dbSNP
rs532664819	3218	dbSNP
rs1434966444	3220	dbSNP
rs1330990462	3221	dbSNP
rs901578675	3222	dbSNP
rs1393189972	3224	dbSNP
rs996340689	3225	dbSNP
rs1470386069	3226	dbSNP
rs553668991	3255	dbSNP
rs968622260	3268	dbSNP
rs1018341045	3271	dbSNP
rs113709232	3272	dbSNP
rs1001092309	3286	dbSNP
rs775869194	3288	dbSNP
rs979715113	3297	dbSNP
rs181484796	3317	dbSNP
rs1186886102	3318	dbSNP
rs1237262522	3320	dbSNP
rs1203910624	3321	dbSNP
rs935255156	3324	dbSNP
rs141095718	3325	dbSNP
rs992103701	3329	dbSNP
rs372375534	3333	dbSNP
rs551257859	3343	dbSNP
rs1280633360	3353	dbSNP
rs969470927	3357	dbSNP
rs981282349	3363	dbSNP
rs1330686761	3367	dbSNP
rs1453678808	3381	dbSNP
rs1408527829	3385	dbSNP
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rs1331997703	3400	dbSNP
rs113134486	3406	dbSNP
rs909000548	3411	dbSNP
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rs1038952276	3422	dbSNP
rs770752408	3424	dbSNP
rs184505361	3426	dbSNP
rs1183617743	3430	dbSNP
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rs372202953	3447	dbSNP
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rs7278812	3453	dbSNP
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rs1385327620	3460	dbSNP
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rs533544825	3471	dbSNP
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rs7282347	3535	dbSNP
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rs1024909207	3554	dbSNP
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rs1036088905	3592	dbSNP
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rs1317073521	3600	dbSNP
rs1283617247	3601	dbSNP
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rs7278834	3682	dbSNP
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rs1260787829	3700	dbSNP
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rs35665440	3728	dbSNP
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rs1365706298	3739	dbSNP
rs539578181	3740	dbSNP
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rs1238754622	3752	dbSNP
rs936455505	3754	dbSNP
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rs1463461150	3770	dbSNP
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rs933061431	3773	dbSNP
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rs1371050356	3788	dbSNP
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rs1419152350	3796	dbSNP
rs912697146	3797	dbSNP
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rs1189887011	3803	dbSNP
rs1422229232	3804	dbSNP
rs1239408247	3813	dbSNP
rs1259918728	3818	dbSNP
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rs1283772033	3825	dbSNP
rs569611329	3826	dbSNP
rs796711793	3828	dbSNP
rs1215452980	3829	dbSNP
rs1320695538	3830	dbSNP
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rs1366292314	3848	dbSNP
rs143876350	3850	dbSNP
rs1456612155	3851	dbSNP
rs570830256	3853	dbSNP
rs1039911276	3857	dbSNP
rs147244702	3859	dbSNP
rs1181430975	3866	dbSNP
rs936714741	3867	dbSNP
rs749786108	3869	dbSNP
rs1476412898	3870	dbSNP
rs1251510890	3871	dbSNP
rs1268879972	3871	dbSNP
rs562094218	3871	dbSNP
rs1166138395	3872	dbSNP
rs1394323350	3878	dbSNP
rs573852515	3879	dbSNP
rs1460347046	3881	dbSNP
rs1052858181	3882	dbSNP
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rs1218593512	3884	dbSNP
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rs1325657924	3884	dbSNP
rs1385133504	3884	dbSNP
rs1390364650	3884	dbSNP
rs1438391583	3884	dbSNP
rs1291287429	3887	dbSNP
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rs1398087903	3889	dbSNP
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rs1421235270	3892	dbSNP
rs1299572294	3895	dbSNP
rs1348277945	3899	dbSNP
rs182166312	3900	dbSNP
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rs892591171	3904	dbSNP
rs1219363136	3905	dbSNP
rs1456140078	3908	dbSNP
rs1256599992	3909	dbSNP
rs1198373230	3910	dbSNP
rs1346388518	3912	dbSNP
rs1253135279	3916	dbSNP
rs1481027459	3917	dbSNP
rs1231244364	3919	dbSNP
rs553400677	3934	dbSNP
rs1442406118	3936	dbSNP
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rs1449318942	3943	dbSNP
rs1398336685	3948	dbSNP
rs1052524376	3950	dbSNP
rs1414809655	3959	dbSNP
rs892654227	3963	dbSNP
rs185901573	3967	dbSNP
rs1486787415	3968	dbSNP
rs71320571	3969	dbSNP
rs369356737	3976	dbSNP
rs905482356	3983	dbSNP
rs189267646	3991	dbSNP
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rs1027015168	4002	dbSNP
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rs575991385	4018	dbSNP
rs952877245	4020	dbSNP
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rs535253014	4023	dbSNP
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rs987154608	4049	dbSNP
rs1342058951	4051	dbSNP
rs1368257582	4051	dbSNP
rs79864358	4055	dbSNP
rs942897323	4059	dbSNP
rs975539979	4064	dbSNP
rs1379374122	4066	dbSNP
rs1226512204	4067	dbSNP
rs925592027	4069	dbSNP
rs1185828557	4071	dbSNP
rs936918295	4071	dbSNP
rs1442399608	4073	dbSNP
rs1308036251	4079	dbSNP
rs1218969301	4089	dbSNP
rs923179855	4095	dbSNP
rs1351602871	4106	dbSNP
rs1285322168	4112	dbSNP
rs1229126334	4138	dbSNP
rs1358693003	4144	dbSNP
rs1282253564	4163	dbSNP
rs1341124029	4169	dbSNP
rs1052450286	4170	dbSNP
rs372843056	4190	dbSNP
rs575718929	4190	dbSNP
rs1359366039	4191	dbSNP
rs559353902	4199	dbSNP
rs1291058507	4209	dbSNP
rs953347251	4210	dbSNP
rs949466845	4214	dbSNP
rs1188694552	4215	dbSNP
rs1475082598	4220	dbSNP
rs1424701419	4221	dbSNP
rs986190158	4224	dbSNP
rs924986187	4229	dbSNP
rs1262984303	4238	dbSNP
rs143242383	4249	dbSNP
rs398121671	4249	dbSNP
rs936401393	4249	dbSNP
rs1052138724	4255	dbSNP
rs1428457969	4261	dbSNP
rs1167342866	4264	dbSNP
rs1387857104	4265	dbSNP
rs914039019	4269	dbSNP
rs1016507334	4274	dbSNP
rs1227602603	4277	dbSNP

- Cell host & microbe, 2011

Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.