miRTarBase - #MIRT442235


—
pre-miRNA Information
pre-miRNA hsa-mir-4776-1   
Genomic Coordinates chr2: 212926257 - 212926336
Description Homo sapiens miR-4776-1 stem-loop
Comment None
RNA Secondary Structure
pre-miRNA hsa-mir-4776-2   
Genomic Coordinates chr2: 212926257 - 212926336
Description Homo sapiens miR-4776-2 stem-loop
Comment None
RNA Secondary Structure

Mature miRNA Information
Mature miRNA hsa-miR-4776-3p
Sequence 54| CUUGCCAUCCUGGUCCACUGCAU |76
Evidence Experimental
Experiments Illumina
SNPs in miRNA
Mutant ID Mutant Position Mutant Source
rs1350638372 1 dbSNP
rs1220781023 5 dbSNP
rs1269946481 7 dbSNP
rs547466728 10 dbSNP
rs965980067 11 dbSNP
rs953060487 13 dbSNP
rs982906747 14 dbSNP
rs1028686150 21 dbSNP
rs951447113 23 dbSNP
Putative Targets

Gene Information
Gene Symbol DDX19A   
Synonyms DDX19-DDX19L, DDX19L
Description DEAD-box helicase 19A
Transcript NM_018332   
Expression
Putative miRNA Targets on DDX19A
3'UTR of DDX19A
(miRNA target sites are highlighted)		 
>DDX19A|NM_018332|3'UTR
   1 GAAGCTCCACCAGCCACTGATGCCAGCCCTGGCACTGCCCCTGCACAGGAGACAAGTGCATTTAGGGCACAGGCCCCGAC
  81 ATCACCCCAAGGACAACGGCAGAAGTAGAGAGAAACTACCTACCTCACTTCAAATTATGTTTGGACTTGACAAAAATAGG
 161 TGCAAATGATGGGGGGCAATAGAAGAAAAAATTTGCATTTTGGAAAATTGGGTCCTTTCCCCACTTTTTTAAAGCCACAT
 241 TCCCCCATCTTTATAATAATCTGGTCACAGTGGTAGTCGCTGGCCCCAGGACCCCCTCCTGATTTTGGCTAGGCATCGTG
 321 GAACCAGCTCCAGCCCCTGAAGAAACGATAGATGTGCAGGTTGTGCGGAAGAGGCTGAGTGGAAAATGGTGTGAGCCCCA
 401 CCGCTGTGCATCGAATGAGGGAAGTGGCAGCAGAGAGGCCAGAGCTGCCCCCTCTCTGTCTCTTCAATGGACCCTTCACA
 481 AGTGTTTCTCCTGCCCTTGGGGCTGTCTTCCTTCTCCTGAAATCCAGAGACTTTCTTGCTCATCCCTTCTCCCTTTCACT
 561 TCTGTTCTCTGCTGCAGAAAGCAGACTTGCATATCCCTGATGAGCAGCTCGGCTACTTTTGTAAACTTCAGATTTGGAGA
 641 GAAACACGAAAGTCTGAATCCTGACCCCTTGAGAGAGAGTGATCTGGCGAGGGCCGATGAAGGGGCTGGGCCTGGTCTTG
 721 CCTTCTCTTCTCTCGGTTGCTCCCTCTGCCTAGGCCCCTGGTACTCAGTCACGGCAGCCAGGAGACCCCAGGTGAGTTTC
 801 TGAGCGCATACGTAGTTGGTTCTTACCCCCAGGTGTCACACGGGGCCGAGAGCTGAGCAAGAATTTGGAATGGAAGTTAT
 881 GACCAAGGGAATTATGCTGTTCATTTATAATAGTGGACATTATGGAGAGCTCTGATTCCTACATAATATGAATAAGGATG
 961 GATAGGCCGGGCGTGGTGGCTCATGCCTATAATCCCAGCACGTTGGGAGGCTGAGGCGGGCGGATCGGTTGAGCTCAGGC
1041 GTTCGGGACCAGCCTGGCCAACATGATGAAACCCCGTCTCTACCAAAAATAGAAAAAAATATAGCCGGGCCTGGTGGCGC
1121 ACGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTAGGAGGATCGCTTGAGCCTGGGTAGAGGCTGCTGTGAGCTGAAAT
1201 GGCGCCACTGCACTCCAGCCTGGGTAACAGAGCGAGACCCCGACTCAATAAATAAATAAGGATGGATAAATTGTAGCGTA
1281 TGCACCATTCATTATGCTAAGACATTTTAAAGTAATTATGAGAAACGCTCTACTAATGATTTGTTTTTATTTGTATTTTT
1361 CTGCTTATTAGACAAATATATACTCATTTTAAAAAGGAAAAAAAAAAAAAAAAA
Target sites Provided by authors   Predicted by miRanda    DRVs    SNPs    DRVs & SNPs
miRNA-target interactions
(Predicted by miRanda)
ID Duplex structure Position Score MFE
1 
miRNA  3' uaCGUCACCUGGUCCUACCGUuc 5'
            || ||| :|::  |||||:  
Target 5' ctGCTGTGAGCTGAAATGGCGcc 3'
 1184 - 1206 125.00 -13.00
2 
miRNA  3' uaCGUCACCUGGUCC---UACCGUUc 5'
            |||  | |: |||   :|||||: 
Target 5' gtGCATCGAATGAGGGAAGTGGCAGc 3'
 406 - 431 125.00 -14.70
3 
miRNA  3' uacGUCACCUGGUCCUACCGUUc 5'
             :|||||| ||  |||| :| 
Target 5' taaTAGTGGA-CATTATGGAGAg 3'
 908 - 929 119.00 -18.20
DRVs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
COSN19693471 4 COSMIC
COSN8865848 7 COSMIC
COSN30145761 8 COSMIC
COSN30107253 65 COSMIC
COSN31479459 75 COSMIC
COSN30478118 78 COSMIC
COSN30496864 79 COSMIC
COSN30152775 89 COSMIC
COSN31505718 89 COSMIC
COSN30576483 98 COSMIC
COSN31506884 101 COSMIC
COSN30135690 107 COSMIC
COSN31547715 113 COSMIC
COSN30500253 128 COSMIC
COSN30126209 193 COSMIC
COSN30169129 266 COSMIC
COSN6547027 736 COSMIC
COSN8236715 1230 COSMIC
SNPs in gene 3'UTRs
Mutant ID Mutant Position Mutant Source
rs765045880 2 dbSNP
rs762777724 4 dbSNP
rs747192985 5 dbSNP
rs750461709 5 dbSNP
rs535001358 6 dbSNP
rs754148451 7 dbSNP
rs768731867 7 dbSNP
rs753166726 8 dbSNP
rs776638412 9 dbSNP
rs758827381 10 dbSNP
rs1160468641 11 dbSNP
rs1358702598 12 dbSNP
rs1282957491 19 dbSNP
rs778349000 24 dbSNP
rs746448043 26 dbSNP
rs770451690 27 dbSNP
rs1336577184 28 dbSNP
rs917880002 29 dbSNP
rs368159872 35 dbSNP
rs375379525 38 dbSNP
rs1240793493 41 dbSNP
rs775133048 42 dbSNP
rs1290520639 46 dbSNP
rs762869761 47 dbSNP
rs768406322 50 dbSNP
rs774356242 52 dbSNP
rs1431400458 59 dbSNP
rs1058430 61 dbSNP
rs1058432 64 dbSNP
rs919799037 67 dbSNP
rs1455841530 69 dbSNP
rs571921407 71 dbSNP
rs538828112 74 dbSNP
rs1420346246 77 dbSNP
rs1046876153 78 dbSNP
rs1055278908 79 dbSNP
rs1297254383 81 dbSNP
rs111798739 93 dbSNP
rs1486510952 97 dbSNP
rs943762311 98 dbSNP
rs1040722641 99 dbSNP
rs1326449354 101 dbSNP
rs1469513032 102 dbSNP
rs117023031 103 dbSNP
rs1232335798 115 dbSNP
rs1231770569 125 dbSNP
rs1297524240 140 dbSNP
rs961520369 143 dbSNP
rs143885836 144 dbSNP
rs554541655 146 dbSNP
rs1050629281 164 dbSNP
rs1361269950 169 dbSNP
rs904056646 170 dbSNP
rs1296929888 171 dbSNP
rs1433052962 175 dbSNP
rs1396820890 176 dbSNP
rs1326748823 181 dbSNP
rs1000967523 193 dbSNP
rs998046016 194 dbSNP
rs769445452 198 dbSNP
rs1348484939 202 dbSNP
rs1029569353 203 dbSNP
rs373971062 209 dbSNP
rs1249851051 210 dbSNP
rs573110235 224 dbSNP
rs1187249545 225 dbSNP
rs954044306 225 dbSNP
rs1455166225 227 dbSNP
rs1253090804 235 dbSNP
rs1358502277 236 dbSNP
rs985388281 240 dbSNP
rs1487336694 248 dbSNP
rs148629795 250 dbSNP
rs559351379 255 dbSNP
rs1190903104 264 dbSNP
rs114589283 266 dbSNP
rs989321213 269 dbSNP
rs1236410833 278 dbSNP
rs1373209313 279 dbSNP
rs1014055682 280 dbSNP
rs1386418193 290 dbSNP
rs1365800287 293 dbSNP
rs1371013406 294 dbSNP
rs1462527265 297 dbSNP
rs950223673 314 dbSNP
rs1024979670 315 dbSNP
rs969794523 318 dbSNP
rs980720645 319 dbSNP
rs937577597 329 dbSNP
rs545204442 331 dbSNP
rs1054763909 335 dbSNP
rs888123101 338 dbSNP
rs1005277045 340 dbSNP
rs1252293071 341 dbSNP
rs1177450622 347 dbSNP
rs1037218306 350 dbSNP
rs1212919161 357 dbSNP
rs1348584729 364 dbSNP
rs563511662 365 dbSNP
rs184231985 367 dbSNP
rs982632191 368 dbSNP
rs1290569726 370 dbSNP
rs1310537939 378 dbSNP
rs908343992 387 dbSNP
rs549050081 388 dbSNP
rs943803696 397 dbSNP
rs1350195199 398 dbSNP
rs557055038 402 dbSNP
rs1041188133 403 dbSNP
rs762762482 404 dbSNP
rs1272686185 405 dbSNP
rs1464065066 407 dbSNP
rs188337644 410 dbSNP
rs528037375 411 dbSNP
rs1050658269 414 dbSNP
rs546594213 415 dbSNP
rs377468775 418 dbSNP
rs1032991746 422 dbSNP
rs957625836 424 dbSNP
rs1256656289 427 dbSNP
rs1198689874 434 dbSNP
rs1262583364 436 dbSNP
rs1482281521 436 dbSNP
rs1240016215 440 dbSNP
rs904129031 443 dbSNP
rs1286816074 446 dbSNP
rs1185179835 448 dbSNP
rs1235585491 453 dbSNP
rs139303124 455 dbSNP
rs971551593 459 dbSNP
rs1386475435 461 dbSNP
rs200530683 468 dbSNP
rs927452949 469 dbSNP
rs892590772 473 dbSNP
rs1013713090 478 dbSNP
rs1367679993 482 dbSNP
rs1188036481 483 dbSNP
rs1185258478 485 dbSNP
rs937548192 491 dbSNP
rs1263946367 494 dbSNP
rs1205840196 495 dbSNP
rs1464596363 497 dbSNP
rs770683038 502 dbSNP
rs1459429703 503 dbSNP
rs1025474012 504 dbSNP
rs1335827676 514 dbSNP
rs1345750470 515 dbSNP
rs1373583003 519 dbSNP
rs1452749755 532 dbSNP
rs909531257 536 dbSNP
rs144119432 542 dbSNP
rs1328748342 545 dbSNP
rs1295647269 565 dbSNP
rs1385840285 576 dbSNP
rs1357592028 585 dbSNP
rs1461654618 587 dbSNP
rs1389736737 590 dbSNP
rs1161317818 591 dbSNP
rs1415555758 596 dbSNP
rs969444649 603 dbSNP
rs1292918589 605 dbSNP
rs1002186778 606 dbSNP
rs1026965013 611 dbSNP
rs1225566935 612 dbSNP
rs1246270482 620 dbSNP
rs896870556 638 dbSNP
rs952621420 644 dbSNP
rs982655420 648 dbSNP
rs908410170 649 dbSNP
rs1282991118 650 dbSNP
rs1033373272 652 dbSNP
rs965579443 655 dbSNP
rs1441180082 657 dbSNP
rs200206359 671 dbSNP
rs369385588 671 dbSNP
rs1321319253 677 dbSNP
rs1411401204 678 dbSNP
rs1396986949 679 dbSNP
rs536452392 681 dbSNP
rs113264966 689 dbSNP
rs1195619706 690 dbSNP
rs971435548 692 dbSNP
rs1246294565 696 dbSNP
rs554724933 697 dbSNP
rs774315392 698 dbSNP
rs1034493199 704 dbSNP
rs1205063080 705 dbSNP
rs573303581 706 dbSNP
rs1281808349 709 dbSNP
rs1234452215 715 dbSNP
rs1343701659 718 dbSNP
rs1376987772 722 dbSNP
rs1272678071 729 dbSNP
rs936929390 733 dbSNP
rs1053116074 735 dbSNP
rs940955321 736 dbSNP
rs1377253261 747 dbSNP
rs1312456412 759 dbSNP
rs1491512860 766 dbSNP
rs1424552165 767 dbSNP
rs1491407218 767 dbSNP
rs892671326 773 dbSNP
rs1298874435 774 dbSNP
rs780822912 775 dbSNP
rs1181964452 776 dbSNP
rs1482349979 777 dbSNP
rs1373237922 781 dbSNP
rs371922008 790 dbSNP
rs558941423 791 dbSNP
rs905294764 796 dbSNP
rs1348993595 800 dbSNP
rs1002261866 806 dbSNP
rs1026996288 807 dbSNP
rs889605342 809 dbSNP
rs1205992567 812 dbSNP
rs888446050 813 dbSNP
rs1358634630 815 dbSNP
rs1332353161 822 dbSNP
rs1480033003 826 dbSNP
rs1176648011 827 dbSNP
rs193188248 828 dbSNP
rs1015913810 829 dbSNP
rs545364280 831 dbSNP
rs868484044 838 dbSNP
rs7193168 842 dbSNP
rs182897667 844 dbSNP
rs1235209596 848 dbSNP
rs542855934 849 dbSNP
rs764432154 852 dbSNP
rs1267054018 858 dbSNP
rs1353956951 859 dbSNP
rs1002939475 869 dbSNP
rs925663146 871 dbSNP
rs1227664656 884 dbSNP
rs934321384 890 dbSNP
rs1034462285 896 dbSNP
rs1328471276 898 dbSNP
rs1320061948 919 dbSNP
rs1455856698 920 dbSNP
rs1397127778 924 dbSNP
rs572353534 929 dbSNP
rs988441790 938 dbSNP
rs1372415772 939 dbSNP
rs1405265941 940 dbSNP
rs914122621 950 dbSNP
rs1188832188 952 dbSNP
rs1006764086 957 dbSNP
rs1246896350 968 dbSNP
rs1016440818 969 dbSNP
rs1469586544 970 dbSNP
rs754160890 973 dbSNP
rs375255588 974 dbSNP
rs560792053 976 dbSNP
rs972309589 981 dbSNP
rs1365952840 984 dbSNP
rs918237218 986 dbSNP
rs955071919 989 dbSNP
rs1370063607 995 dbSNP
rs986506983 996 dbSNP
rs905328074 1000 dbSNP
rs938115890 1002 dbSNP
rs528217585 1003 dbSNP
rs888477312 1004 dbSNP
rs1166216961 1006 dbSNP
rs1455290074 1011 dbSNP
rs1004602522 1016 dbSNP
rs1267553051 1017 dbSNP
rs541324184 1019 dbSNP
rs901095523 1022 dbSNP
rs879181877 1023 dbSNP
rs890149909 1025 dbSNP
rs942465880 1027 dbSNP
rs1468902941 1029 dbSNP
rs28408124 1030 dbSNP
rs564935245 1034 dbSNP
rs1226208153 1035 dbSNP
rs945930338 1036 dbSNP
rs560901240 1041 dbSNP
rs978516792 1042 dbSNP
rs1419119816 1045 dbSNP
rs1032711719 1046 dbSNP
rs1410941258 1047 dbSNP
rs1370533434 1049 dbSNP
rs907187918 1050 dbSNP
rs955732676 1051 dbSNP
rs532664066 1052 dbSNP
rs1182685722 1054 dbSNP
rs1461441322 1055 dbSNP
rs1249476756 1065 dbSNP
rs1212937098 1070 dbSNP
rs1324477068 1073 dbSNP
rs868547914 1076 dbSNP
rs757608257 1077 dbSNP
rs74359861 1079 dbSNP
rs1270378924 1094 dbSNP
rs1290571567 1101 dbSNP
rs1360897835 1102 dbSNP
rs916894178 1107 dbSNP
rs1274576216 1108 dbSNP
rs1286930872 1110 dbSNP
rs1334919334 1119 dbSNP
rs529694895 1120 dbSNP
rs759857187 1123 dbSNP
rs550816447 1124 dbSNP
rs926811156 1128 dbSNP
rs569219677 1131 dbSNP
rs536413679 1137 dbSNP
rs549777673 1138 dbSNP
rs566833290 1143 dbSNP
rs1241725156 1144 dbSNP
rs750925834 1144 dbSNP
rs150997377 1145 dbSNP
rs1256914670 1149 dbSNP
rs1199990512 1151 dbSNP
rs780682789 1152 dbSNP
rs747691798 1153 dbSNP
rs201352706 1156 dbSNP
rs998548547 1160 dbSNP
rs1328844599 1165 dbSNP
rs1161935013 1166 dbSNP
rs1049625827 1167 dbSNP
rs1311363957 1169 dbSNP
rs889646393 1172 dbSNP
rs1366743533 1176 dbSNP
rs1387824087 1180 dbSNP
rs1320736707 1190 dbSNP
rs1401626312 1195 dbSNP
rs767626555 1204 dbSNP
rs999969487 1205 dbSNP
rs1344229924 1209 dbSNP
rs80176395 1212 dbSNP
rs986389057 1214 dbSNP
rs910895170 1215 dbSNP
rs964104482 1217 dbSNP
rs1232187674 1224 dbSNP
rs989933795 1230 dbSNP
rs577361353 1234 dbSNP
rs1282331289 1235 dbSNP
rs1266595743 1242 dbSNP
rs538250527 1243 dbSNP
rs945929628 1247 dbSNP
rs1041648554 1249 dbSNP
rs1487189871 1260 dbSNP
rs1243267232 1270 dbSNP
rs1343660807 1278 dbSNP
rs557257115 1279 dbSNP
rs938588409 1282 dbSNP
rs1055776053 1284 dbSNP
rs1009954573 1285 dbSNP
rs1185571820 1299 dbSNP
rs368710890 1299 dbSNP
rs1389755999 1309 dbSNP
rs1161335824 1318 dbSNP
rs1431614843 1319 dbSNP
rs1392101689 1320 dbSNP
rs115271246 1321 dbSNP
rs1006700519 1327 dbSNP
rs971078063 1328 dbSNP
rs112216038 1329 dbSNP
rs1378787227 1330 dbSNP
rs1208570698 1332 dbSNP
rs1344986609 1333 dbSNP
rs1274703638 1337 dbSNP
rs926843888 1338 dbSNP
rs1339489347 1340 dbSNP
rs1436990730 1341 dbSNP
rs1233540637 1344 dbSNP
rs1330287216 1344 dbSNP
rs1030456890 1345 dbSNP
rs1321421610 1350 dbSNP
rs1411554787 1354 dbSNP
rs1371146538 1362 dbSNP
rs959588342 1366 dbSNP
rs1314294206 1372 dbSNP
rs1307366913 1374 dbSNP
rs1429145105 1378 dbSNP
rs1417474694 1379 dbSNP
rs1174519130 1381 dbSNP
rs748981881 1381 dbSNP
rs910015600 1388 dbSNP
Experimental Support 1 for Functional miRNA-Target Interaction
miRNA:Target ----
Validation Method
Conditions BC-3
Location of target site 3'UTR
Tools used in this research TargetScan , miRTarCLIP , Piranha
Original Description (Extracted from the article) ... PAR-CLIP data was present in GSM796039. RNA binding protein: AGO2. Condition:4-Thiouridine PAR-CLIP data was present in GSM796040. RNA binding protein: AGO2. Condition:4-Thiouridine ...

- Gottwein E; Corcoran DL; Mukherjee N; et al., 2011, Cell host & microbe.

Article - Gottwein E; Corcoran DL; Mukherjee N; et al.
- Cell host & microbe, 2011
Primary effusion lymphoma (PEL) is caused by Kaposi's sarcoma-associated herpesvirus (KSHV) and frequently also harbors Epstein-Barr virus (EBV). The expression of KSHV- and EBV-encoded microRNAs (miRNAs) in PELs suggests a role for these miRNAs in latency and lymphomagenesis. Using PAR-CLIP, a technology which allows the direct and transcriptome-wide identification of miRNA targets, we delineate the target sites for all viral and cellular miRNAs expressed in PEL cell lines. The resulting data set revealed that KSHV miRNAs directly target more than 2000 cellular mRNAs, including many involved in pathways relevant to KSHV pathogenesis. Moreover, 58% of these mRNAs are also targeted by EBV miRNAs, via distinct binding sites. In addition to a known viral analog of cellular miR-155, we show that KSHV encodes a viral miRNA that mimics cellular miR-142-3p function. In summary, this study identifies an extensive list of KSHV miRNA targets, which are likely to influence viral replication and pathogenesis.
LinkOut: [PMID: 22100165]
CLIP-seq Support 1 for dataset GSM796039
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000302243.7 | 3UTR | UUGGCAAACAUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
CLIP-seq Support 2 for dataset GSM796040
Method / RBP PAR-CLIP / AGO2
Cell line / Condition BC-3 / 4-Thiouridine
Location of target site ENST00000302243.7 | 3UTR | UUGGCAAACAUUAAG
Tools used in this analysis TargetScan, miRTarCLIP, and Piranha
Article / Accession Series PMID: 22100165 / GSE32109
CLIP-seq Viewer Link
MiRNA-Target Expression Profile
Dataset Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
MiRNA-Target Expression Profile (TCGA)
Tumor Pearson Correlation P-value for Pearson Correlation Spearman Correlation P-value for Spearman Correlation Samples Chart
104 hsa-miR-4776-3p Target Genes:
Functional analysis:
ID Target Description Validation methods
Strong evidence Less strong evidence
MIRT107576 VLDLR very low density lipoprotein receptor 2 2
MIRT183601 SNRPE small nuclear ribonucleoprotein polypeptide E 2 4
MIRT208901 PDCD10 programmed cell death 10 2 2
MIRT441496 IFFO2 intermediate filament family orphan 2 2 2
MIRT441590 PSTK phosphoseryl-tRNA kinase 2 2
MIRT441865 RNASEL ribonuclease L 2 2
MIRT442155 DPY19L1 dpy-19 like C-mannosyltransferase 1 2 2
MIRT442235 DDX19A DEAD-box helicase 19A 2 2
MIRT442519 MOB3B MOB kinase activator 3B 2 2
MIRT443347 STX7 syntaxin 7 2 2
MIRT443598 ZNF91 zinc finger protein 91 2 2
MIRT443725 USP14 ubiquitin specific peptidase 14 2 2
MIRT453650 RAB6C RAB6C, member RAS oncogene family 2 2
MIRT464155 VMP1 vacuole membrane protein 1 2 11
MIRT472507 NACC1 nucleus accumbens associated 1 2 4
MIRT476018 GTF2A1 general transcription factor IIA subunit 1 2 2
MIRT477716 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 2 2
MIRT478545 CTNND1 catenin delta 1 2 2
MIRT481629 ARF1 ADP ribosylation factor 1 2 2
MIRT486451 MDM2 MDM2 proto-oncogene 2 2
MIRT494856 ZNF99 zinc finger protein 99 2 4
MIRT495096 FXR1 FMR1 autosomal homolog 1 2 2
MIRT495766 ZNF546 zinc finger protein 546 2 2
MIRT496650 PITPNM3 PITPNM family member 3 2 2
MIRT496920 CLMN calmin 2 2
MIRT496997 SNAP25 synaptosome associated protein 25 2 2
MIRT497056 C6orf223 chromosome 6 open reading frame 223 2 2
MIRT498391 KIF6 kinesin family member 6 2 2
MIRT499057 CTBP1 C-terminal binding protein 1 2 4
MIRT499093 DENND4C DENN domain containing 4C 2 8
MIRT499860 SVOP SV2 related protein 2 12
MIRT501968 MAPK6 mitogen-activated protein kinase 6 2 2
MIRT504910 CD38 CD38 molecule 2 4
MIRT506781 KLHL15 kelch like family member 15 2 6
MIRT509549 ACTG1 actin gamma 1 2 4
MIRT510814 SBNO1 strawberry notch homolog 1 2 4
MIRT515490 NTRK3 neurotrophic receptor tyrosine kinase 3 2 4
MIRT517752 ZNF366 zinc finger protein 366 2 4
MIRT518553 GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 2 2
MIRT518633 NOM1 nucleolar protein with MIF4G domain 1 2 2
MIRT518721 ABCG8 ATP binding cassette subfamily G member 8 2 2
MIRT524469 CHRM3 cholinergic receptor muscarinic 3 2 4
MIRT525213 ZNF253 zinc finger protein 253 2 2
MIRT527556 ADCY7 adenylate cyclase 7 2 2
MIRT532691 TCN2 transcobalamin 2 2 4
MIRT533124 YES1 YES proto-oncogene 1, Src family tyrosine kinase 2 2
MIRT534080 SPRY4 sprouty RTK signaling antagonist 4 2 2
MIRT534437 SDR16C5 short chain dehydrogenase/reductase family 16C member 5 2 2
MIRT534997 PRPF40A pre-mRNA processing factor 40 homolog A 2 4
MIRT537160 GGCX gamma-glutamyl carboxylase 2 2
MIRT539359 AFF4 AF4/FMR2 family member 4 2 2
MIRT547019 PPP1CB protein phosphatase 1 catalytic subunit beta 2 2
MIRT550122 ZNF138 zinc finger protein 138 2 2
MIRT558471 DBN1 drebrin 1 2 2
MIRT563055 ZNF28 zinc finger protein 28 2 2
MIRT563550 SCP2 sterol carrier protein 2 2 2
MIRT566860 LRRC58 leucine rich repeat containing 58 2 2
MIRT567239 HSPA13 heat shock protein family A (Hsp70) member 13 2 2
MIRT572846 BRPF3 bromodomain and PHD finger containing 3 2 2
MIRT573355 PDE3A phosphodiesterase 3A 2 2
MIRT573761 PRKAG1 protein kinase AMP-activated non-catalytic subunit gamma 1 2 2
MIRT574911 Vmp1 vacuole membrane protein 1 2 7
MIRT610172 SEC14L4 SEC14 like lipid binding 4 2 2
MIRT611271 RBMXL1 RNA binding motif protein, X-linked like 1 2 2
MIRT612325 TRPS1 transcriptional repressor GATA binding 1 2 2
MIRT612720 NOL4 nucleolar protein 4 2 2
MIRT613093 ETS1 ETS proto-oncogene 1, transcription factor 2 2
MIRT613759 RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis) 2 2
MIRT614788 RRAGC Ras related GTP binding C 2 2
MIRT614926 MARCH3 membrane associated ring-CH-type finger 3 2 2
MIRT616777 CD44 CD44 molecule (Indian blood group) 2 2
MIRT616892 DUSP1 dual specificity phosphatase 1 2 2
MIRT618446 SERPINA3 serpin family A member 3 2 2
MIRT619155 PPDPF pancreatic progenitor cell differentiation and proliferation factor 2 2
MIRT619271 CEP57L1 centrosomal protein 57 like 1 2 2
MIRT620899 MUT methylmalonyl-CoA mutase 2 2
MIRT621151 MICALCL MICAL C-terminal like 2 2
MIRT622138 SOX4 SRY-box 4 2 2
MIRT622925 PAK7 p21 (RAC1) activated kinase 5 2 2
MIRT623595 IPO9 importin 9 2 2
MIRT623916 FNBP1L formin binding protein 1 like 2 2
MIRT624072 EBF1 early B-cell factor 1 2 2
MIRT630961 NGDN neuroguidin 2 2
MIRT636738 ADD3 adducin 3 2 2
MIRT639788 MVK mevalonate kinase 2 2
MIRT641106 ZNF274 zinc finger protein 274 2 2
MIRT641573 RFX1 regulatory factor X1 2 2
MIRT643089 NDUFB5 NADH:ubiquinone oxidoreductase subunit B5 2 2
MIRT646457 PRDM10 PR/SET domain 10 2 2
MIRT653068 ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 2 2
MIRT657672 GPR26 G protein-coupled receptor 26 2 2
MIRT660287 BICC1 BicC family RNA binding protein 1 2 2
MIRT660354 BAG4 BCL2 associated athanogene 4 2 2
MIRT665823 TIMM8B translocase of inner mitochondrial membrane 8 homolog B 2 2
MIRT678564 ZNF786 zinc finger protein 786 2 2
MIRT691520 ZNF208 zinc finger protein 208 2 2
MIRT695586 TMEM199 transmembrane protein 199 2 2
MIRT698033 TRPM7 transient receptor potential cation channel subfamily M member 7 2 2
MIRT701012 PCGF5 polycomb group ring finger 5 2 2
MIRT701353 NR4A3 nuclear receptor subfamily 4 group A member 3 2 2
MIRT704846 CD55 CD55 molecule (Cromer blood group) 2 2
MIRT707112 NWD1 NACHT and WD repeat domain containing 1 2 2
MIRT718656 HNF4A hepatocyte nuclear factor 4 alpha 2 2
MIRT720561 C1RL complement C1r subcomponent like 2 2
miRNA-Drug Resistance Associations
miRNA Drug Name CID NSC FDA Effect/Pattern Detection Method Level Phenotype Condition
hsa-miR-4776-3p Paclitaxel 36314 NSC125973 approved resistant High Breast Cancer cell line (Bads-200, Bats-72, BCap37)
hsa-miR-4776-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CIS)
hsa-miR-4776-3p Cisplatin 5460033 NSC119875 approved resistant High Ovarian Cancer cell line (A2780CP20)
hsa-miR-4776-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CP20)
hsa-miR-4776-3p Cisplatin 5460033 NSC119875 approved resistant cell line (CIS)
hsa-miR-4776-3p Neoadjuvant chemotherapy resistant tissue (breast cancer)

Error report submission